SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    433801 5yrj:B (1.8) BS02 GLC ? GO:0030246 ... A0A2Z5V8U8 29524263
    433802 5yrl:A (2.1) BS01 GLC ? GO:0030246 ... A0A2Z5V8U8 29524263
    433803 5yrl:B (2.1) BS01 GLC ? GO:0030246 ... A0A2Z5V8U8 29524263
    433804 5yrl:B (2.1) BS02 GLC ? GO:0030246 ... A0A2Z5V8U8 29524263
    433805 5yrm:B (1.5) BS01 BGC ? GO:0030246 ... A0A2Z5V8U8 29524263
    433806 5yrm:B (1.5) BS02 GLC ? GO:0030246 ... A0A2Z5V8U8 29524263
    433807 5yro:A (2.396) BS01 GTP 3.6.5.- GO:0000054 ... P62826 N/A
    433808 5yro:A (2.396) BS02 MG 3.6.5.- GO:0000054 ... P62826 N/A
    433809 5yrp:A (2.99) BS01 MG ? GO:0071111 ... A0QUG3 29555845
    433810 5yrp:B (2.99) BS01 MG ? GO:0071111 ... A0QUG3 29555845
    433811 5yrr:A (2.88) BS01 COA 2.7.7.3 GO:0003824 ... B0VTH7 N/A
    433812 5yrs:A (1.76) BS01 peptide 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P04585 20397633
    433813 5yrs:B (1.76) BS01 peptide 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P04585 20397633
    433814 5yrt:A (1.7) BS01 CA 4.2.1.28 GO:0003824 ... Q59470 29797764
    433815 5yrt:A (1.7) BS02 B12 4.2.1.28 GO:0003824 ... Q59470 29797764
    433816 5yrt:B (1.7) BS01 B12 4.2.1.28 N/A Q59471 29797764
    433817 5yrt:D (1.7) BS01 CA 4.2.1.28 GO:0003824 ... Q59470 29797764
    433818 5yrt:D (1.7) BS02 B12 4.2.1.28 GO:0003824 ... Q59470 29797764
    433819 5yrt:E (1.7) BS01 B12 4.2.1.28 N/A Q59471 29797764
    433820 5yrt:G (1.7) BS01 CA 4.2.1.28 GO:0003824 ... Q59470 29797764
    433821 5yrt:G (1.7) BS02 B12 4.2.1.28 GO:0003824 ... Q59470 29797764
    433822 5yrt:H (1.7) BS01 B12 4.2.1.28 N/A Q59471 29797764
    433823 5yrt:J (1.7) BS01 CA 4.2.1.28 GO:0003824 ... Q59470 29797764
    433824 5yrt:J (1.7) BS02 B12 4.2.1.28 GO:0003824 ... Q59470 29797764
    433825 5yrt:K (1.7) BS01 B12 4.2.1.28 N/A Q59471 29797764
    433826 5yrv:A (1.55) BS01 CA 4.2.1.28 GO:0003824 ... Q59470 29797764
    433827 5yrv:A (1.55) BS02 B12 4.2.1.28 GO:0003824 ... Q59470 29797764
    433828 5yrv:B (1.55) BS01 B12 4.2.1.28 N/A Q59471 29797764
    433829 5yrv:D (1.55) BS01 CA 4.2.1.28 GO:0003824 ... Q59470 29797764
    433830 5yrv:D (1.55) BS02 B12 4.2.1.28 GO:0003824 ... Q59470 29797764
    433831 5yrv:E (1.55) BS01 B12 4.2.1.28 N/A Q59471 29797764
    433832 5yrv:G (1.55) BS01 CA 4.2.1.28 GO:0003824 ... Q59470 29797764
    433833 5yrv:G (1.55) BS02 B12 4.2.1.28 GO:0003824 ... Q59470 29797764
    433834 5yrv:H (1.55) BS01 B12 4.2.1.28 N/A Q59471 29797764
    433835 5yrv:J (1.55) BS01 CA 4.2.1.28 GO:0003824 ... Q59470 29797764
    433836 5yrv:J (1.55) BS02 B12 4.2.1.28 GO:0003824 ... Q59470 29797764
    433837 5yrv:K (1.55) BS01 B12 4.2.1.28 N/A Q59471 29797764
    433838 5yrx:A (1.9) BS01 CD ? GO:0003677 ... P9WNR9 29154992
    433839 5ys0:A (2.601) BS01 ERG ? N/A Q06681 29339490
    433840 5ys0:B (2.601) BS01 ERG ? N/A Q06681 29339490
    433841 5ys1:A (1.49) BS01 CU 1.16.3.4 GO:0005507 ... P36649 30250139
    433842 5ys1:A (1.49) BS02 CU 1.16.3.4 GO:0005507 ... P36649 30250139
    433843 5ys1:A (1.49) BS03 CU 1.16.3.4 GO:0005507 ... P36649 30250139
    433844 5ys3:A (1.823) BS01 78M ? GO:0005886 ... A8ALU5 29588525
    433845 5ys3:B (1.823) BS01 78M ? GO:0005886 ... A8ALU5 29588525
    433846 5ys3:B (1.823) BS02 78M ? GO:0005886 ... A8ALU5 29588525
    433847 5ys3:C (1.823) BS01 78M ? GO:0005886 ... A8ALU5 29588525
    433848 5ys3:C (1.823) BS02 78M ? GO:0005886 ... A8ALU5 29588525
    433849 5ys5:A (2.2) BS01 CU 1.16.3.4 GO:0005507 ... P36649 30250139
    433850 5ys5:A (2.2) BS02 CU 1.16.3.4 GO:0005507 ... P36649 30250139
    433851 5ys5:A (2.2) BS03 CU 1.16.3.4 GO:0005507 ... P36649 30250139
    433852 5ys5:A (2.2) BS04 CU 1.16.3.4 GO:0005507 ... P36649 30250139
    433853 5ys5:A (2.2) BS05 CU 1.16.3.4 GO:0005507 ... P36649 30250139
    433854 5ys5:A (2.2) BS06 CU 1.16.3.4 GO:0005507 ... P36649 30250139
    433855 5ys8:A (2.798) BS01 ACT ? GO:0005886 ... A8ALU5 29588525
    433856 5ys8:A (2.798) BS02 ACT ? GO:0005886 ... A8ALU5 29588525
    433857 5ys8:B (2.798) BS01 ACT ? GO:0005886 ... A8ALU5 29588525
    433858 5ys8:B (2.798) BS02 78M ? GO:0005886 ... A8ALU5 29588525
    433859 5ys8:B (2.798) BS03 78M ? GO:0005886 ... A8ALU5 29588525
    433860 5ys8:C (2.798) BS01 ACT ? GO:0005886 ... A8ALU5 29588525
    433861 5ys9:A (2.5) BS01 FAD 1.3.3.6 GO:0003997 ... O74936 29429324
    433862 5ys9:A (2.5) BS02 FAD 1.3.3.6 GO:0003997 ... O74936 29429324
    433863 5ys9:B (2.5) BS01 FAD 1.3.3.6 GO:0003997 ... O74936 29429324
    433864 5ys9:B (2.5) BS02 FAD 1.3.3.6 GO:0003997 ... O74936 29429324
    433865 5ysb:A (2.2) BS01 ZN ? GO:0015768 ... Q92AS8 29678880
    433866 5ysb:A (2.2) BS02 ZN ? GO:0015768 ... Q92AS8 29678880
    433867 5ysb:A (2.2) BS03 ZN ? GO:0015768 ... Q92AS8 29678880
    433868 5ysb:A (2.2) BS04 ZN ? GO:0015768 ... Q92AS8 29678880
    433869 5ysb:B (2.2) BS01 ZN ? GO:0015768 ... Q92AS8 29678880
    433870 5ysb:B (2.2) BS02 ZN ? GO:0015768 ... Q92AS8 29678880
    433871 5ysb:B (2.2) BS03 ZN ? GO:0015768 ... Q92AS8 29678880
    433872 5ysc:A (1.673) BS01 CNC ? GO:0015889 ... A5F5P5 30463026
    433873 5ysd:A (2.1) BS01 GLC ? GO:0015768 ... Q92AS8 29678880
    433874 5ysd:A (2.1) BS02 BGC ? GO:0015768 ... Q92AS8 29678880
    433875 5ysd:A (2.1) BS03 BGC ? GO:0015768 ... Q92AS8 29678880
    433876 5ysd:A (2.1) BS04 MG ? GO:0015768 ... Q92AS8 29678880
    433877 5ysd:B (2.1) BS01 GLC ? GO:0015768 ... Q92AS8 29678880
    433878 5ysd:B (2.1) BS02 BGC ? GO:0015768 ... Q92AS8 29678880
    433879 5ysd:B (2.1) BS03 BGC ? GO:0015768 ... Q92AS8 29678880
    433880 5yse:A (1.6) BS01 BGC ? GO:0015768 ... Q92AS8 29678880
    433881 5yse:A (1.6) BS02 BGC ? GO:0015768 ... Q92AS8 29678880
    433882 5yse:A (1.6) BS03 BGC ? GO:0015768 ... Q92AS8 29678880
    433883 5yse:A (1.6) BS04 MG ? GO:0015768 ... Q92AS8 29678880
    433884 5yse:B (1.6) BS01 BGC ? GO:0015768 ... Q92AS8 29678880
    433885 5yse:B (1.6) BS02 BGC ? GO:0015768 ... Q92AS8 29678880
    433886 5yse:B (1.6) BS03 BGC ? GO:0015768 ... Q92AS8 29678880
    433887 5ysf:A (1.9) BS01 BGC ? GO:0015768 ... Q92AS8 29678880
    433888 5ysf:A (1.9) BS02 BGC ? GO:0015768 ... Q92AS8 29678880
    433889 5ysf:A (1.9) BS03 BGC ? GO:0015768 ... Q92AS8 29678880
    433890 5ysf:A (1.9) BS04 BGC ? GO:0015768 ... Q92AS8 29678880
    433891 5ysf:A (1.9) BS05 MG ? GO:0015768 ... Q92AS8 29678880
    433892 5ysf:B (1.9) BS01 BGC ? GO:0015768 ... Q92AS8 29678880
    433893 5ysf:B (1.9) BS02 BGC ? GO:0015768 ... Q92AS8 29678880
    433894 5ysf:B (1.9) BS03 BGC ? GO:0015768 ... Q92AS8 29678880
    433895 5ysf:B (1.9) BS04 BGC ? GO:0015768 ... Q92AS8 29678880
    433896 5ysg:A (2.0) BS01 CU ? GO:0005507 ... P19567 N/A
    433897 5ysg:B (2.0) BS01 CU ? GO:0005507 ... P19567 N/A
    433898 5ysg:C (2.0) BS01 CU ? GO:0005507 ... P19567 N/A
    433899 5ysg:D (2.0) BS01 CU ? GO:0005507 ... P19567 N/A
    433900 5ysh:A (1.9) BS01 CA 4.2.1.28 GO:0003824 ... Q59470 29797764
    433901 5ysh:A (1.9) BS02 B12 4.2.1.28 GO:0003824 ... Q59470 29797764
    433902 5ysh:B (1.9) BS01 B12 4.2.1.28 N/A Q59471 29797764
    433903 5ysh:D (1.9) BS01 CA 4.2.1.28 GO:0003824 ... Q59470 29797764
    433904 5ysh:D (1.9) BS02 B12 4.2.1.28 GO:0003824 ... Q59470 29797764
    433905 5ysh:E (1.9) BS01 B12 4.2.1.28 N/A Q59471 29797764
    433906 5ysh:G (1.9) BS01 CA 4.2.1.28 GO:0003824 ... Q59470 29797764
    433907 5ysh:G (1.9) BS02 B12 4.2.1.28 GO:0003824 ... Q59470 29797764
    433908 5ysh:H (1.9) BS01 B12 4.2.1.28 N/A Q59471 29797764
    433909 5ysh:J (1.9) BS01 CA 4.2.1.28 GO:0003824 ... Q59470 29797764
    433910 5ysh:J (1.9) BS02 B12 4.2.1.28 GO:0003824 ... Q59470 29797764
    433911 5ysh:K (1.9) BS01 B12 4.2.1.28 N/A Q59471 29797764
    433912 5ysi:A (1.546) BS01 NCA 2.3.2.-
    2.4.2.31
    3.4.22.-
    GO:0106274 ... Q5ZTK4 29870726
    433913 5ysm:A (1.9) BS01 HEM ? GO:0004497 ... A0A0H3CVZ6 29904078
    433914 5ysn:A (2.001) BS01 B12 4.3.1.7 GO:0005829 ... P0AEJ6 29797764
    433915 5ysn:B (2.001) BS01 B12 4.3.1.7 GO:0006520 ... P19636 29797764
    433916 5ysn:C (2.001) BS01 B12 4.3.1.7 GO:0005829 ... P0AEJ6 29797764
    433917 5ysn:D (2.001) BS01 B12 4.3.1.7 GO:0006520 ... P19636 29797764
    433918 5yso:A (2.501) BS01 90C ? N/A P62508 31010838 BindingDB: IC50=40.0nM
    433919 5yso:B (2.501) BS01 90C ? N/A P62508 31010838 BindingDB: IC50=40.0nM
    433920 5yso:C (2.501) BS01 90C ? N/A P62508 31010838 BindingDB: IC50=40.0nM
    433921 5ysp:A (1.7) BS01 INS ? GO:0016301 ... Q9WYP6 29720581
    433922 5ysp:A (1.7) BS02 MDN ? GO:0016301 ... Q9WYP6 29720581
    433923 5ysp:B (1.7) BS01 INS ? GO:0016301 ... Q9WYP6 29720581
    433924 5ysq:A (1.47) BS01 INS ? GO:0016301 ... Q9WYP6 29720581
    433925 5ysq:B (1.47) BS01 INS ? GO:0016301 ... Q9WYP6 29720581
    433926 5ysr:A (2.05) BS01 B12 4.3.1.7 GO:0005829 ... P0AEJ6 29797764
    433927 5ysr:B (2.05) BS01 B12 4.3.1.7 GO:0006520 ... P19636 29797764
    433928 5ysr:C (2.05) BS01 B12 4.3.1.7 GO:0005829 ... P0AEJ6 29797764
    433929 5ysr:D (2.05) BS01 B12 4.3.1.7 GO:0006520 ... P19636 29797764
    433930 5yss:B (2.276) BS01 NAD ? GO:0000166 ... A0A0D7LY80 30498220
    433931 5yss:D (2.276) BS01 NAD ? GO:0000166 ... A0A0D7LY80 30498220
    433932 5yst:A (2.04) BS01 GTP 3.6.5.- GO:0000054 ... P62826 N/A
    433933 5yst:A (2.04) BS02 MG 3.6.5.- GO:0000054 ... P62826 N/A
    433934 5ysu:A (2.3) BS01 GTP 3.6.5.- GO:0000054 ... P62826 N/A
    433935 5ysu:A (2.3) BS02 MG 3.6.5.- GO:0000054 ... P62826 N/A
    433936 5ysu:C (2.3) BS01 F2X ? GO:0000055 ... P30822 N/A
    433937 5ysu:C (2.3) BS02 F2X ? GO:0000055 ... P30822 N/A
    433938 5ysw:A (2.6) BS01 HEM ? GO:0004497 ... A0A0H3CVZ6 29904078
    433939 5ysw:A (2.6) BS02 9LF ? GO:0004497 ... A0A0H3CVZ6 29904078
    433940 5ysy:A (2.0) BS01 90L ? GO:0003677 ... P11473 29560490
    433941 5ysz:A (1.631) BS01 BGC ? GO:0000976 ... Q47RE1 30062758
    433942 5ysz:A (1.631) BS02 BGC ? GO:0000976 ... Q47RE1 30062758
    433943 5yt0:A (1.89) BS01 peptide ? GO:0003924 ... Q9Y9B3 29844065
    433944 5yt0:A (1.89) BS02 GDP ? GO:0003924 ... Q9Y9B3 29844065
    433945 5yt2:A (2.0) BS01 90O ? GO:0003677 ... P11473 29560490
    433946 5yt3:A (2.9) BS01 ANP 2.7.12.2 GO:0004672 ... Q02750 N/A
    433947 5yt3:A (2.9) BS02 MG 2.7.12.2 GO:0004672 ... Q02750 N/A
    433948 5yt3:B (2.9) BS01 ANP 2.7.12.2 GO:0004672 ... Q02750 N/A
    433949 5yt3:C (2.9) BS01 ANP 2.7.12.2 GO:0004672 ... Q02750 N/A
    433950 5yt3:C (2.9) BS02 MG 2.7.12.2 GO:0004672 ... Q02750 N/A
    433951 5yt3:D (2.9) BS01 ANP 2.7.12.2 GO:0004672 ... Q02750 N/A
    433952 5yt4:A (2.0) BS01 GOL ? GO:0002667 ... Q05315 29293962
    433953 5yt6:B (1.501) BS01 ZN ? N/A Q86VP1 29940186
    433954 5yt6:D (1.501) BS01 ZN ? N/A Q86VP1 29940186
    433955 5yt6:F (1.501) BS01 ZN ? N/A Q86VP1 29940186
    433956 5yt6:H (1.501) BS01 ZN ? N/A Q86VP1 29940186
    433957 5yt7:A (1.66) BS01 CU ? GO:0005507 ... P00282 N/A
    433958 5yt7:B (1.66) BS01 CU ? GO:0005507 ... P00282 N/A
    433959 5yt7:B (1.66) BS02 CA ? GO:0005507 ... P00282 N/A
    433960 5yt7:C (1.66) BS01 CU ? GO:0005507 ... P00282 N/A
    433961 5yt7:D (1.66) BS01 CU ? GO:0005507 ... P00282 N/A
    433962 5yta:A (2.1) BS01 NAD 1.1.1.27 GO:0003824 ... P00336 N/A
    433963 5yta:B (2.1) BS01 NAD 1.1.1.27 GO:0003824 ... P00336 N/A
    433964 5ytb:A (2.3) BS01 GTP 3.6.5.- GO:0000054 ... P62826 N/A
    433965 5ytb:A (2.3) BS02 MG 3.6.5.- GO:0000054 ... P62826 N/A
    433966 5ytc:A (2.28) BS01 dna 2.7.7.7 GO:0001882 ... P19821 30407705
    433967 5ytc:A (2.28) BS02 dna 2.7.7.7 GO:0001882 ... P19821 30407705
    433968 5ytc:A (2.28) BS03 DTP 2.7.7.7 GO:0001882 ... P19821 30407705
    433969 5ytc:A (2.28) BS04 MG 2.7.7.7 GO:0001882 ... P19821 30407705
    433970 5ytd:A (2.0) BS01 dna 2.7.7.7 GO:0001882 ... P19821 30407705
    433971 5ytd:A (2.0) BS02 dna 2.7.7.7 GO:0001882 ... P19821 30407705
    433972 5ytd:A (2.0) BS03 DGT 2.7.7.7 GO:0001882 ... P19821 30407705
    433973 5ytd:A (2.0) BS04 MG 2.7.7.7 GO:0001882 ... P19821 30407705
    433974 5ytd:A (2.0) BS05 MG 2.7.7.7 GO:0001882 ... P19821 30407705
    433975 5yte:A (2.21) BS01 dna 2.7.7.7 GO:0001882 ... P19821 30407705
    433976 5yte:A (2.21) BS02 dna 2.7.7.7 GO:0001882 ... P19821 30407705
    433977 5yte:A (2.21) BS03 DTP 2.7.7.7 GO:0001882 ... P19821 30407705
    433978 5yte:A (2.21) BS04 MG 2.7.7.7 GO:0001882 ... P19821 30407705
    433979 5yte:A (2.21) BS05 MG 2.7.7.7 GO:0001882 ... P19821 30407705
    433980 5ytf:A (1.98) BS01 dna 2.7.7.7 GO:0001882 ... P19821 30407705
    433981 5ytf:A (1.98) BS02 dna 2.7.7.7 GO:0001882 ... P19821 30407705
    433982 5ytf:A (1.98) BS03 MG 2.7.7.7 GO:0001882 ... P19821 30407705
    433983 5ytf:A (1.98) BS04 MG 2.7.7.7 GO:0001882 ... P19821 30407705
    433984 5ytf:A (1.98) BS05 DGT 2.7.7.7 GO:0001882 ... P19821 30407705
    433985 5ytg:A (2.07) BS01 dna 2.7.7.7 GO:0001882 ... P19821 30407705
    433986 5ytg:A (2.07) BS02 dna 2.7.7.7 GO:0001882 ... P19821 30407705
    433987 5ytg:A (2.07) BS03 DGT 2.7.7.7 GO:0001882 ... P19821 30407705
    433988 5ytg:A (2.07) BS04 MG 2.7.7.7 GO:0001882 ... P19821 30407705
    433989 5ytg:A (2.07) BS05 MG 2.7.7.7 GO:0001882 ... P19821 30407705
    433990 5yth:A (2.53) BS01 dna 2.7.7.7 GO:0001882 ... P19821 30407705
    433991 5yth:A (2.53) BS02 dna 2.7.7.7 GO:0001882 ... P19821 30407705
    433992 5yth:A (2.53) BS03 DGT 2.7.7.7 GO:0001882 ... P19821 30407705
    433993 5yth:A (2.53) BS04 MG 2.7.7.7 GO:0001882 ... P19821 30407705
    433994 5yth:A (2.53) BS05 MG 2.7.7.7 GO:0001882 ... P19821 30407705
    433995 5ytk:A (2.7) BS01 peptide 2.3.1.286 GO:0017136 ... Q9NTG7 29198988
    433996 5ytk:A (2.7) BS02 ZN 2.3.1.286 GO:0017136 ... Q9NTG7 29198988
    433997 5ytk:A (2.7) BS03 LEU 2.3.1.286 GO:0017136 ... Q9NTG7 29198988
    433998 5ytk:B (2.7) BS01 ZN 2.3.1.286 GO:0017136 ... Q9NTG7 29198988
    433999 5ytk:B (2.7) BS02 LEU 2.3.1.286 GO:0017136 ... Q9NTG7 29198988
    434000 5ytk:B (2.7) BS03 LYS 2.3.1.286 GO:0017136 ... Q9NTG7 29198988

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).