SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    434201 5yux:A (2.04) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434202 5yux:A (2.04) BS03 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434203 5yux:A (2.04) BS04 TTP 2.7.7.7 GO:0000287 ... Q47155 29850882
    434204 5yux:A (2.04) BS05 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434205 5yux:A (2.04) BS06 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434206 5yux:F (2.04) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434207 5yux:F (2.04) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434208 5yux:F (2.04) BS03 TTP 2.7.7.7 GO:0000287 ... Q47155 29850882
    434209 5yux:F (2.04) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434210 5yux:F (2.04) BS05 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434211 5yuy:A (1.74) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434212 5yuy:A (1.74) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434213 5yuy:A (1.74) BS03 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434214 5yuy:A (1.74) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434215 5yuy:A (1.74) BS05 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434216 5yuy:A (1.74) BS06 TTP 2.7.7.7 GO:0000287 ... Q47155 29850882
    434217 5yuy:F (1.74) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434218 5yuy:F (1.74) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434219 5yuy:F (1.74) BS03 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434220 5yuy:F (1.74) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434221 5yuy:F (1.74) BS05 TTP 2.7.7.7 GO:0000287 ... Q47155 29850882
    434222 5yuz:A (1.83) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434223 5yuz:A (1.83) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434224 5yuz:A (1.83) BS03 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434225 5yuz:A (1.83) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434226 5yuz:A (1.83) BS05 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434227 5yuz:A (1.83) BS06 TTP 2.7.7.7 GO:0000287 ... Q47155 29850882
    434228 5yuz:F (1.83) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434229 5yuz:F (1.83) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434230 5yuz:F (1.83) BS03 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434231 5yuz:F (1.83) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434232 5yv0:A (2.09) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434233 5yv0:A (2.09) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434234 5yv0:A (2.09) BS03 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434235 5yv0:A (2.09) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434236 5yv0:A (2.09) BS05 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434237 5yv0:A (2.09) BS06 TTP 2.7.7.7 GO:0000287 ... Q47155 29850882
    434238 5yv0:F (2.09) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434239 5yv0:F (2.09) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434240 5yv0:F (2.09) BS03 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434241 5yv0:F (2.09) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434242 5yv0:F (2.09) BS05 PO4 2.7.7.7 GO:0000287 ... Q47155 29850882
    434243 5yv0:F (2.09) BS06 PO4 2.7.7.7 GO:0000287 ... Q47155 29850882
    434244 5yv1:A (2.09) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434245 5yv1:A (2.09) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434246 5yv1:A (2.09) BS03 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434247 5yv1:A (2.09) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434248 5yv1:A (2.09) BS05 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434249 5yv1:F (2.09) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434250 5yv1:F (2.09) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434251 5yv1:F (2.09) BS03 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434252 5yv1:F (2.09) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434253 5yv1:F (2.09) BS05 PO4 2.7.7.7 GO:0000287 ... Q47155 29850882
    434254 5yv1:F (2.09) BS06 PO4 2.7.7.7 GO:0000287 ... Q47155 29850882
    434255 5yv2:A (1.9) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434256 5yv2:A (1.9) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434257 5yv2:A (1.9) BS03 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434258 5yv2:A (1.9) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434259 5yv2:A (1.9) BS05 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434260 5yv2:A (1.9) BS06 PO4 2.7.7.7 GO:0000287 ... Q47155 29850882
    434261 5yv2:A (1.9) BS07 PO4 2.7.7.7 GO:0000287 ... Q47155 29850882
    434262 5yv2:F (1.9) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434263 5yv2:F (1.9) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434264 5yv2:F (1.9) BS03 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434265 5yv2:F (1.9) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434266 5yv2:F (1.9) BS05 PO4 2.7.7.7 GO:0000287 ... Q47155 29850882
    434267 5yv3:A (2.03) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434268 5yv3:A (2.03) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434269 5yv3:A (2.03) BS03 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434270 5yv3:A (2.03) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434271 5yv3:A (2.03) BS05 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434272 5yv3:A (2.03) BS06 TTP 2.7.7.7 GO:0000287 ... Q47155 29850882
    434273 5yv3:F (2.03) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434274 5yv3:F (2.03) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 29850882
    434275 5yv3:F (2.03) BS03 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434276 5yv3:F (2.03) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 29850882
    434277 5yv3:F (2.03) BS05 TTP 2.7.7.7 GO:0000287 ... Q47155 29850882
    434278 5yv5:A (2.1) BS01 peptide ? GO:0005524 ... I6V0C7 30010948
    434279 5yv5:A (2.1) BS02 ADP ? GO:0005524 ... I6V0C7 30010948
    434280 5yv5:A (2.1) BS03 ADP ? GO:0005524 ... I6V0C7 30010948
    434281 5yv5:A (2.1) BS04 MG ? GO:0005524 ... I6V0C7 30010948
    434282 5yv5:A (2.1) BS05 MG ? GO:0005524 ... I6V0C7 30010948
    434283 5yv8:A (1.927) BS01 91L 2.7.11.17 GO:0004672 ... Q96RR4 32348940
    434284 5yv9:A (2.53) BS01 91O 2.7.11.17 GO:0004672 ... Q96RR4 32348940
    434285 5yva:A (2.574) BS01 91X 2.7.11.17 GO:0004672 ... Q96RR4 32348940
    434286 5yvb:A (2.02) BS01 92C 2.7.11.17 GO:0004672 ... Q96RR4 32348940
    434287 5yvc:A (2.02) BS01 SU6 2.7.11.17 GO:0004672 ... Q96RR4 32348940
    434288 5yve:A (3.4) BS01 MG ? GO:0001614 ... P56373 29674445
    434289 5yve:A (3.4) BS02 AF9 ? GO:0001614 ... P56373 29674445 BindingDB: IC50=45nM
    434290 5yvg:A (4.05) BS01 peptide ? GO:0006606 ... Q92973 29677513
    434291 5yvg:B (4.05) BS01 peptide ? GO:0006606 ... Q92973 29677513
    434292 5yvh:A (3.15) BS01 peptide ? GO:0006606 ... Q92973 29677513
    434293 5yvi:A (2.9) BS01 peptide ? GO:0006606 ... Q92973 29677513
    434294 5yvj:B (2.508) BS01 peptide 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... F8TEL4 N/A
    434295 5yvk:A (1.292) BS01 0HZ ? GO:0046872 ... V5TER4 30222239
    434296 5yvk:A (1.292) BS02 CA ? GO:0046872 ... V5TER4 30222239
    434297 5yvk:A (1.292) BS03 CA ? GO:0046872 ... V5TER4 30222239
    434298 5yvl:A (2.059) BS01 CA ? GO:0046872 ... A0A076NBW8 30222239
    434299 5yvl:A (2.059) BS02 CA ? GO:0046872 ... A0A076NBW8 30222239
    434300 5yvl:B (2.059) BS01 CA ? GO:0046872 ... A0A076NBW8 30222239
    434301 5yvl:B (2.059) BS02 CA ? GO:0046872 ... A0A076NBW8 30222239
    434302 5yvl:C (2.059) BS01 CA ? GO:0046872 ... A0A076NBW8 30222239
    434303 5yvl:C (2.059) BS02 CA ? GO:0046872 ... A0A076NBW8 30222239
    434304 5yvl:D (2.059) BS01 CA ? GO:0046872 ... A0A076NBW8 30222239
    434305 5yvl:D (2.059) BS02 CA ? GO:0046872 ... A0A076NBW8 30222239
    434306 5yvm:A (2.12) BS01 MN ? GO:0000166 ... A0A133UP32 29188989
    434307 5yvm:A (2.12) BS02 NZQ ? GO:0000166 ... A0A133UP32 29188989
    434308 5yvn:A (1.33) BS01 GSH 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 30874320
    434309 5yvo:A (1.8) BS01 MLX 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 30874320
    434310 5yvo:A (1.8) BS02 MLX 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 30874320
    434311 5yvp:A (2.051) BS01 CA ? GO:0046872 ... A0A1P8VSI6 30222239
    434312 5yvp:A (2.051) BS02 CA ? GO:0046872 ... A0A1P8VSI6 30222239
    434313 5yvp:B (2.051) BS01 CA ? GO:0046872 ... A0A1P8VSI6 30222239
    434314 5yvp:B (2.051) BS02 CA ? GO:0046872 ... A0A1P8VSI6 30222239
    434315 5yvp:C (2.051) BS01 CA ? GO:0046872 ... A0A1P8VSI6 30222239
    434316 5yvp:C (2.051) BS02 CA ? GO:0046872 ... A0A1P8VSI6 30222239
    434317 5yvp:D (2.051) BS01 CA ? GO:0046872 ... A0A1P8VSI6 30222239
    434318 5yvp:D (2.051) BS02 CA ? GO:0046872 ... A0A1P8VSI6 30222239
    434319 5yvr:A (1.896) BS01 MN ? GO:0000166 ... A0A133UP32 29188989
    434320 5yvr:A (1.896) BS02 NDP ? GO:0000166 ... A0A133UP32 29188989
    434321 5yvs:A (2.345) BS01 MN ? GO:0000166 ... A0A133UP32 29188989
    434322 5yvs:A (2.345) BS02 NDP ? GO:0000166 ... A0A133UP32 29188989
    434323 5yvt:A (2.4) BS01 MG 1.1.1.41 GO:0000287 ... P50213 29453450
    434324 5yvt:A (2.4) BS02 NAI 1.1.1.41 GO:0000287 ... P50213 29453450 MOAD: Kd=109uM
    434325 5yvt:A (2.4) BS03 NAI 1.1.1.41 GO:0000287 ... P50213 29453450 MOAD: Kd=109uM
    434326 5yvt:B (2.4) BS01 NAI ? GO:0000287 ... P51553 29453450 MOAD: Kd=109uM
    434327 5yvx:A (1.591) BS01 peptide 2.1.1.- GO:0008270 ... Q2LAE1 29496997
    434328 5yvx:A (1.591) BS02 ZN 2.1.1.- GO:0008270 ... Q2LAE1 29496997
    434329 5yvz:A (1.6) BS01 FE ? GO:0046872 ... B3DUR4 30092253
    434330 5yvz:A (1.6) BS02 AKG ? GO:0046872 ... B3DUR4 30092253
    434331 5yw0:A (1.49) BS01 FE ? GO:0046872 ... B3DUR4 30092253
    434332 5yw3:A (1.19) BS01 CU ? GO:0005507 ... P19567 N/A
    434333 5yw3:B (1.19) BS01 CU ? GO:0005507 ... P19567 N/A
    434334 5yw3:C (1.19) BS01 CU ? GO:0005507 ... P19567 N/A
    434335 5yw3:D (1.19) BS01 CU ? GO:0005507 ... P19567 N/A
    434336 5yw4:A (2.047) BS01 NAP 1.1.1.195 GO:0000166 ... A3LWG4 31866427
    434337 5yw5:A (1.9) BS01 ADE 2.4.2.7 GO:0002055 ... Q5NII9 29694705
    434338 5yw5:B (1.9) BS01 ADE 2.4.2.7 GO:0002055 ... Q5NII9 29694705
    434339 5yw5:C (1.9) BS01 ADE 2.4.2.7 GO:0002055 ... Q5NII9 29694705
    434340 5yw5:D (1.9) BS01 ADE 2.4.2.7 GO:0002055 ... Q5NII9 29694705
    434341 5yw7:B (4.4) BS01 GBM ? GO:0001508 ... A0A1U7R319 29594720
    434342 5yw7:B (4.4) BS02 AGS ? GO:0001508 ... A0A1U7R319 29594720
    434343 5yw8:A (4.4) BS01 AGS ? GO:0001508 ... Q61743 29594720
    434344 5yw8:B (4.4) BS01 AGS ? GO:0001508 ... A0A1U7R319 29594720
    434345 5yw8:C (4.4) BS01 AGS ? GO:0001508 ... Q61743 29594720
    434346 5yw8:D (4.4) BS01 AGS ? GO:0001508 ... A0A1U7R319 29594720
    434347 5yw8:E (4.4) BS01 AGS ? GO:0001508 ... Q61743 29594720
    434348 5yw8:F (4.4) BS01 AGS ? GO:0001508 ... A0A1U7R319 29594720
    434349 5yw8:G (4.4) BS01 AGS ? GO:0001508 ... Q61743 29594720
    434350 5yw8:H (4.4) BS01 AGS ? GO:0001508 ... A0A1U7R319 29594720
    434351 5yw9:A (5.0) BS01 AGS ? GO:0001508 ... Q61743 29594720
    434352 5yw9:B (5.0) BS01 AGS ? GO:0001508 ... A0A1U7R319 29594720
    434353 5yw9:C (5.0) BS01 AGS ? GO:0001508 ... Q61743 29594720
    434354 5yw9:D (5.0) BS01 AGS ? GO:0001508 ... A0A1U7R319 29594720
    434355 5yw9:E (5.0) BS01 AGS ? GO:0001508 ... Q61743 29594720
    434356 5yw9:F (5.0) BS01 AGS ? GO:0001508 ... A0A1U7R319 29594720
    434357 5yw9:G (5.0) BS01 AGS ? GO:0001508 ... Q61743 29594720
    434358 5yw9:H (5.0) BS01 AGS ? GO:0001508 ... A0A1U7R319 29594720
    434359 5ywa:A (6.1) BS01 AGS ? GO:0001508 ... Q61743 29594720
    434360 5ywa:B (6.1) BS01 AGS ? GO:0001508 ... A0A1U7R319 29594720
    434361 5ywa:C (6.1) BS01 AGS ? GO:0001508 ... Q61743 29594720
    434362 5ywa:D (6.1) BS01 AGS ? GO:0001508 ... A0A1U7R319 29594720
    434363 5ywa:E (6.1) BS01 AGS ? GO:0001508 ... Q61743 29594720
    434364 5ywa:F (6.1) BS01 AGS ? GO:0001508 ... A0A1U7R319 29594720
    434365 5ywa:G (6.1) BS01 AGS ? GO:0001508 ... Q61743 29594720
    434366 5ywa:H (6.1) BS01 AGS ? GO:0001508 ... A0A1U7R319 29594720
    434367 5ywb:A (5.2) BS01 ADP ? GO:0001508 ... Q61743 29594720
    434368 5ywb:B (5.2) BS01 ADP ? GO:0005267 ... Q09427 29594720
    434369 5ywb:B (5.2) BS02 ADP ? GO:0005267 ... Q09427 29594720
    434370 5ywb:B (5.2) BS03 MG ? GO:0005267 ... Q09427 29594720
    434371 5ywb:C (5.2) BS01 ADP ? GO:0001508 ... Q61743 29594720
    434372 5ywb:D (5.2) BS01 ADP ? GO:0005267 ... Q09427 29594720
    434373 5ywb:D (5.2) BS02 ADP ? GO:0005267 ... Q09427 29594720
    434374 5ywb:D (5.2) BS03 MG ? GO:0005267 ... Q09427 29594720
    434375 5ywb:E (5.2) BS01 ADP ? GO:0001508 ... Q61743 29594720
    434376 5ywb:F (5.2) BS01 ADP ? GO:0005267 ... Q09427 29594720
    434377 5ywb:F (5.2) BS02 ADP ? GO:0005267 ... Q09427 29594720
    434378 5ywb:F (5.2) BS03 MG ? GO:0005267 ... Q09427 29594720
    434379 5ywb:G (5.2) BS01 ADP ? GO:0001508 ... Q61743 29594720
    434380 5ywb:H (5.2) BS01 ADP ? GO:0005267 ... Q09427 29594720
    434381 5ywb:H (5.2) BS02 ADP ? GO:0005267 ... Q09427 29594720
    434382 5ywb:H (5.2) BS03 MG ? GO:0005267 ... Q09427 29594720
    434383 5ywc:A (4.3) BS01 ADP ? GO:0001508 ... Q61743 29594720
    434384 5ywc:A (4.3) BS02 ADP ? GO:0001508 ... Q61743 29594720
    434385 5ywc:B (4.3) BS01 ADP ? GO:0001508 ... A0A1U7R319 29594720
    434386 5ywc:B (4.3) BS02 ADP ? GO:0001508 ... A0A1U7R319 29594720
    434387 5ywc:B (4.3) BS03 MG ? GO:0001508 ... A0A1U7R319 29594720
    434388 5ywc:C (4.3) BS01 ADP ? GO:0001508 ... Q61743 29594720
    434389 5ywc:C (4.3) BS02 ADP ? GO:0001508 ... Q61743 29594720
    434390 5ywc:D (4.3) BS01 ADP ? GO:0001508 ... A0A1U7R319 29594720
    434391 5ywc:D (4.3) BS02 ADP ? GO:0001508 ... A0A1U7R319 29594720
    434392 5ywc:D (4.3) BS03 MG ? GO:0001508 ... A0A1U7R319 29594720
    434393 5ywc:E (4.3) BS01 ADP ? GO:0001508 ... Q61743 29594720
    434394 5ywc:E (4.3) BS02 ADP ? GO:0001508 ... Q61743 29594720
    434395 5ywc:F (4.3) BS01 ADP ? GO:0001508 ... A0A1U7R319 29594720
    434396 5ywc:F (4.3) BS02 ADP ? GO:0001508 ... A0A1U7R319 29594720
    434397 5ywc:F (4.3) BS03 MG ? GO:0001508 ... A0A1U7R319 29594720
    434398 5ywc:G (4.3) BS01 ADP ? GO:0001508 ... Q61743 29594720
    434399 5ywc:G (4.3) BS02 ADP ? GO:0001508 ... Q61743 29594720
    434400 5ywc:H (4.3) BS01 ADP ? GO:0001508 ... A0A1U7R319 29594720

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).