SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    434801 5z1t:A (1.42) BS01 EFN ? N/A O60885 29541371 BindingDB: Kd=498nM, IC50=630nM
    434802 5z1x:A (1.38) BS01 CU 1.10.3.2 GO:0005507 ... A0A3F2YLU5 30087829
    434803 5z1x:A (1.38) BS02 CU 1.10.3.2 GO:0005507 ... A0A3F2YLU5 30087829
    434804 5z1x:A (1.38) BS03 CU 1.10.3.2 GO:0005507 ... A0A3F2YLU5 30087829
    434805 5z1x:A (1.38) BS04 CU 1.10.3.2 GO:0005507 ... A0A3F2YLU5 30087829
    434806 5z1x:A (1.38) BS05 OXY 1.10.3.2 GO:0005507 ... A0A3F2YLU5 30087829
    434807 5z1x:B (1.38) BS01 CU 1.10.3.2 GO:0005507 ... A0A3F2YLU5 30087829
    434808 5z1x:B (1.38) BS02 CU 1.10.3.2 GO:0005507 ... A0A3F2YLU5 30087829
    434809 5z1x:B (1.38) BS03 CU 1.10.3.2 GO:0005507 ... A0A3F2YLU5 30087829
    434810 5z1x:B (1.38) BS04 CU 1.10.3.2 GO:0005507 ... A0A3F2YLU5 30087829
    434811 5z1x:B (1.38) BS05 OXY 1.10.3.2 GO:0005507 ... A0A3F2YLU5 30087829
    434812 5z20:A (2.2) BS01 NAI 1.1.1.28 GO:0000166 ... Q9I530 30149697
    434813 5z20:B (2.2) BS01 NAI 1.1.1.28 GO:0000166 ... Q9I530 30149697
    434814 5z20:C (2.2) BS01 NAI 1.1.1.28 GO:0000166 ... Q9I530 30149697
    434815 5z20:D (2.2) BS01 NAI 1.1.1.28 GO:0000166 ... Q9I530 30149697
    434816 5z20:E (2.2) BS01 NAI 1.1.1.28 GO:0000166 ... Q9I530 30149697
    434817 5z20:F (2.2) BS01 NAI 1.1.1.28 GO:0000166 ... Q9I530 30149697
    434818 5z21:A (2.3) BS01 NAI 1.1.1.28 GO:0000166 ... Q8RG11 30149697
    434819 5z21:B (2.3) BS01 NAI 1.1.1.28 GO:0000166 ... Q8RG11 30149697
    434820 5z21:C (2.3) BS01 NAI 1.1.1.28 GO:0000166 ... Q8RG11 30149697
    434821 5z21:D (2.3) BS01 NAI 1.1.1.28 GO:0000166 ... Q8RG11 30149697
    434822 5z22:A (1.5) BS01 CU N/A GO:0005507 ... N/A 31278318
    434823 5z22:A (1.5) BS02 CU N/A GO:0005507 ... N/A 31278318
    434824 5z22:A (1.5) BS03 CU N/A GO:0005507 ... N/A 31278318
    434825 5z22:A (1.5) BS04 CU N/A GO:0005507 ... N/A 31278318
    434826 5z22:A (1.5) BS05 OXY N/A GO:0005507 ... N/A 31278318
    434827 5z23:A (2.73) BS01 dna ? GO:0000786 ... P49450
    P68431
    30718488
    434828 5z23:A (2.73) BS02 dna ? GO:0000786 ... P49450
    P68431
    30718488
    434829 5z23:B (2.73) BS01 dna ? GO:0000781 ... P62805 30718488
    434830 5z23:B (2.73) BS02 dna ? GO:0000781 ... P62805 30718488
    434831 5z23:C (2.73) BS01 dna ? GO:0000786 ... P04908 30718488
    434832 5z23:C (2.73) BS02 dna ? GO:0000786 ... P04908 30718488
    434833 5z23:D (2.73) BS01 dna ? GO:0000786 ... P06899 30718488
    434834 5z23:D (2.73) BS02 dna ? GO:0000786 ... P06899 30718488
    434835 5z23:E (2.73) BS01 dna ? GO:0000786 ... P49450
    P68431
    30718488
    434836 5z23:E (2.73) BS02 dna ? GO:0000786 ... P49450
    P68431
    30718488
    434837 5z23:F (2.73) BS01 dna ? GO:0000781 ... P62805 30718488
    434838 5z23:F (2.73) BS02 dna ? GO:0000781 ... P62805 30718488
    434839 5z23:G (2.73) BS01 dna ? GO:0000786 ... P04908 30718488
    434840 5z23:G (2.73) BS02 dna ? GO:0000786 ... P04908 30718488
    434841 5z23:H (2.73) BS01 dna ? GO:0000786 ... P06899 30718488
    434842 5z23:H (2.73) BS02 dna ? GO:0000786 ... P06899 30718488
    434843 5z25:A (1.7) BS01 HEC ? GO:0009055 ... O67504 29484831
    434844 5z27:A (1.6) BS01 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    434845 5z27:A (1.6) BS02 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    434846 5z27:B (1.6) BS01 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    434847 5z27:B (1.6) BS02 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    434848 5z28:A (2.245) BS01 ZN ? N/A Q5CCK4 N/A
    434849 5z28:A (2.245) BS02 ZN ? N/A Q5CCK4 N/A
    434850 5z28:A (2.245) BS03 ZN ? N/A Q5CCK4 N/A
    434851 5z28:B (2.245) BS01 ZN ? N/A Q5CCK4 N/A
    434852 5z28:B (2.245) BS02 ZN ? N/A Q5CCK4 N/A
    434853 5z28:B (2.245) BS03 ZN ? N/A Q5CCK4 N/A
    434854 5z2b:A (1.901) BS01 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    434855 5z2b:A (1.901) BS02 OXY 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    434856 5z2b:A (1.901) BS03 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    434857 5z2b:B (1.901) BS01 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    434858 5z2b:B (1.901) BS02 AZA 1.7.3.3
    4.1.1.97
    GO:0004846 ... Q45697 N/A
    434859 5z2c:A (2.594) BS01 AYU 2.7.11.1 GO:0004674 ... Q96QP1 30111836
    434860 5z2c:B (2.594) BS01 AYU 2.7.11.1 GO:0004674 ... Q96QP1 30111836
    434861 5z2c:C (2.594) BS01 AYU 2.7.11.1 GO:0004674 ... Q96QP1 30111836
    434862 5z2c:D (2.594) BS01 AYU 2.7.11.1 GO:0004674 ... Q96QP1 30111836
    434863 5z2c:E (2.594) BS01 AYU 2.7.11.1 GO:0004674 ... Q96QP1 30111836
    434864 5z2c:F (2.594) BS01 AYU 2.7.11.1 GO:0004674 ... Q96QP1 30111836
    434865 5z2c:G (2.594) BS01 AYU 2.7.11.1 GO:0004674 ... Q96QP1 30111836
    434866 5z2c:H (2.594) BS01 AYU 2.7.11.1 GO:0004674 ... Q96QP1 30111836
    434867 5z2c:I (2.594) BS01 AYU 2.7.11.1 GO:0004674 ... Q96QP1 30111836
    434868 5z2e:A (1.8) BS01 PDC 1.17.1.8 GO:0000166 ... A0A3B6UER2 29786696
    434869 5z2f:A (2.1) BS01 NAP 1.17.1.8 GO:0000166 ... A0A3B6UER2 29786696
    434870 5z2f:A (2.1) BS02 PDC 1.17.1.8 GO:0000166 ... A0A3B6UER2 29786696
    434871 5z2g:A (2.676) BS01 FAD 1.4.3.2 GO:0016491 ... A8QL58 N/A
    434872 5z2g:B (2.676) BS01 FAD 1.4.3.2 GO:0016491 ... A8QL58 N/A
    434873 5z2k:A (1.8) BS01 MN ? GO:0007155 ... C6XF58 30125692
    434874 5z2l:A (1.7) BS01 NDP ? GO:0016491 ... P39333 29462616 MOAD: Kd=45uM
    434875 5z2l:B (1.7) BS01 NDP ? GO:0016491 ... P39333 29462616 MOAD: Kd=45uM
    434876 5z2l:C (1.7) BS01 NDP ? GO:0016491 ... P39333 29462616 MOAD: Kd=45uM
    434877 5z2l:D (1.7) BS01 NDP ? GO:0016491 ... P39333 29462616 MOAD: Kd=45uM
    434878 5z2l:E (1.7) BS01 NDP ? GO:0016491 ... P39333 29462616 MOAD: Kd=45uM
    434879 5z2l:F (1.7) BS01 NDP ? GO:0016491 ... P39333 29462616 MOAD: Kd=45uM
    434880 5z2l:G (1.7) BS01 NDP ? GO:0016491 ... P39333 29462616 MOAD: Kd=45uM
    434881 5z2l:H (1.7) BS01 NDP ? GO:0016491 ... P39333 29462616 MOAD: Kd=45uM
    434882 5z2l:I (1.7) BS01 NDP ? GO:0016491 ... P39333 29462616 MOAD: Kd=45uM
    434883 5z2l:J (1.7) BS01 NDP ? GO:0016491 ... P39333 29462616 MOAD: Kd=45uM
    434884 5z2l:K (1.7) BS01 NDP ? GO:0016491 ... P39333 29462616 MOAD: Kd=45uM
    434885 5z2l:L (1.7) BS01 NDP ? GO:0016491 ... P39333 29462616 MOAD: Kd=45uM
    434886 5z2m:A (2.142) BS01 MG 3.6.5.2 GO:0003924 ... P51150 30012887
    434887 5z2m:A (2.142) BS02 GTP 3.6.5.2 GO:0003924 ... P51150 30012887
    434888 5z2m:C (2.142) BS01 GTP 3.6.5.2 GO:0003924 ... P51150 30012887
    434889 5z2p:A (2.3) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434890 5z2p:A (2.3) BS02 MN 2.2.1.9 GO:0000287 ... P17109 30341164
    434891 5z2p:A (2.3) BS03 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434892 5z2p:B (2.3) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434893 5z2p:B (2.3) BS02 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434894 5z2p:B (2.3) BS03 MN 2.2.1.9 GO:0000287 ... P17109 30341164
    434895 5z2p:C (2.3) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434896 5z2p:C (2.3) BS02 MN 2.2.1.9 GO:0000287 ... P17109 30341164
    434897 5z2p:C (2.3) BS03 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434898 5z2p:D (2.3) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434899 5z2p:D (2.3) BS02 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434900 5z2p:D (2.3) BS03 MN 2.2.1.9 GO:0000287 ... P17109 30341164
    434901 5z2p:E (2.3) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434902 5z2p:E (2.3) BS02 MN 2.2.1.9 GO:0000287 ... P17109 30341164
    434903 5z2p:E (2.3) BS03 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434904 5z2p:F (2.3) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434905 5z2p:F (2.3) BS02 MN 2.2.1.9 GO:0000287 ... P17109 30341164
    434906 5z2p:F (2.3) BS03 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434907 5z2p:G (2.3) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434908 5z2p:G (2.3) BS02 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434909 5z2p:G (2.3) BS03 MN 2.2.1.9 GO:0000287 ... P17109 30341164
    434910 5z2p:H (2.3) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434911 5z2p:H (2.3) BS02 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434912 5z2p:H (2.3) BS03 MN 2.2.1.9 GO:0000287 ... P17109 30341164
    434913 5z2r:A (2.3) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434914 5z2r:A (2.3) BS02 MG 2.2.1.9 GO:0000287 ... P17109 30341164
    434915 5z2r:B (2.3) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434916 5z2r:B (2.3) BS02 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434917 5z2r:B (2.3) BS03 MG 2.2.1.9 GO:0000287 ... P17109 30341164
    434918 5z2r:C (2.3) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434919 5z2r:C (2.3) BS02 MG 2.2.1.9 GO:0000287 ... P17109 30341164
    434920 5z2r:C (2.3) BS03 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434921 5z2r:D (2.3) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434922 5z2r:D (2.3) BS02 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434923 5z2r:D (2.3) BS03 MG 2.2.1.9 GO:0000287 ... P17109 30341164
    434924 5z2r:E (2.3) BS01 MG 2.2.1.9 GO:0000287 ... P17109 30341164
    434925 5z2r:E (2.3) BS02 TPP 2.2.1.9 GO:0000287 ... P17109 30341164
    434926 5z2r:E (2.3) BS03 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434927 5z2r:F (2.3) BS01 TPP 2.2.1.9 GO:0000287 ... P17109 30341164
    434928 5z2r:F (2.3) BS02 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434929 5z2r:F (2.3) BS03 MG 2.2.1.9 GO:0000287 ... P17109 30341164
    434930 5z2r:G (2.3) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434931 5z2r:G (2.3) BS02 MN 2.2.1.9 GO:0000287 ... P17109 30341164
    434932 5z2r:G (2.3) BS03 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434933 5z2r:H (2.3) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434934 5z2r:H (2.3) BS02 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434935 5z2r:H (2.3) BS03 MG 2.2.1.9 GO:0000287 ... P17109 30341164
    434936 5z2t:C (2.623) BS01 dna ? GO:0003677 ... Q9UBX2 29572508
    434937 5z2t:C (2.623) BS02 dna ? GO:0003677 ... Q9UBX2 29572508
    434938 5z2t:D (2.623) BS01 dna ? GO:0003677 ... Q9UBX2 29572508
    434939 5z2u:A (2.35) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434940 5z2u:A (2.35) BS02 MG 2.2.1.9 GO:0000287 ... P17109 30341164
    434941 5z2u:B (2.35) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434942 5z2u:B (2.35) BS02 MG 2.2.1.9 GO:0000287 ... P17109 30341164
    434943 5z2u:B (2.35) BS03 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434944 5z2u:C (2.35) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434945 5z2u:C (2.35) BS02 MG 2.2.1.9 GO:0000287 ... P17109 30341164
    434946 5z2u:C (2.35) BS03 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434947 5z2u:D (2.35) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434948 5z2u:D (2.35) BS02 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434949 5z2u:D (2.35) BS03 MG 2.2.1.9 GO:0000287 ... P17109 30341164
    434950 5z2u:E (2.35) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434951 5z2u:E (2.35) BS02 MG 2.2.1.9 GO:0000287 ... P17109 30341164
    434952 5z2u:E (2.35) BS03 TPP 2.2.1.9 GO:0000287 ... P17109 30341164
    434953 5z2u:F (2.35) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434954 5z2u:F (2.35) BS02 TPP 2.2.1.9 GO:0000287 ... P17109 30341164
    434955 5z2u:F (2.35) BS03 MG 2.2.1.9 GO:0000287 ... P17109 30341164
    434956 5z2u:G (2.35) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434957 5z2u:G (2.35) BS02 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434958 5z2u:G (2.35) BS03 MG 2.2.1.9 GO:0000287 ... P17109 30341164
    434959 5z2u:H (2.35) BS01 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434960 5z2u:H (2.35) BS02 TD6 2.2.1.9 GO:0000287 ... P17109 30341164
    434961 5z2u:H (2.35) BS03 MG 2.2.1.9 GO:0000287 ... P17109 30341164
    434962 5z2v:A (2.2) BS01 ZN ? GO:0000725 ... Q9I3H9 29633970
    434963 5z2v:A (2.2) BS02 N ? GO:0000725 ... Q9I3H9 29633970
    434964 5z2v:B (2.2) BS01 ZN ? GO:0000725 ... Q9I3H9 29633970
    434965 5z2w:A (3.0) BS01 MG ? GO:0090529 ... P06136 30584256
    434966 5z2x:A (1.98) BS01 NAP 1.1.1.2 GO:0000166 ... A7TM80 30247889
    434967 5z2x:B (1.98) BS01 NAP 1.1.1.2 GO:0000166 ... A7TM80 30247889
    434968 5z30:A (2.45) BS01 dna ? GO:0000786 ... P68431 30053102
    434969 5z30:A (2.45) BS02 dna ? GO:0000786 ... P68431 30053102
    434970 5z30:B (2.45) BS01 dna ? GO:0000781 ... P62805 30053102
    434971 5z30:B (2.45) BS02 dna ? GO:0000781 ... P62805 30053102
    434972 5z30:C (2.45) BS01 dna ? GO:0000786 ... P0C0S5 30053102
    434973 5z30:C (2.45) BS02 dna ? GO:0000786 ... P0C0S5 30053102
    434974 5z30:D (2.45) BS01 dna ? GO:0000786 ... P06899 30053102
    434975 5z30:D (2.45) BS02 dna ? GO:0000786 ... P06899 30053102
    434976 5z30:E (2.45) BS01 dna ? GO:0000786 ... P68431 30053102
    434977 5z30:E (2.45) BS02 dna ? GO:0000786 ... P68431 30053102
    434978 5z30:F (2.45) BS01 dna ? GO:0000781 ... P62805 30053102
    434979 5z30:F (2.45) BS02 dna ? GO:0000781 ... P62805 30053102
    434980 5z30:G (2.45) BS01 dna ? GO:0000786 ... P0C0S5 30053102
    434981 5z30:G (2.45) BS02 dna ? GO:0000786 ... P0C0S5 30053102
    434982 5z30:H (2.45) BS01 dna ? GO:0000786 ... P06899 30053102
    434983 5z30:H (2.45) BS02 dna ? GO:0000786 ... P06899 30053102
    434984 5z34:A (2.399) BS01 ZN N/A GO:0005975 ... N/A N/A
    434985 5z36:A (-1.00) BS01 969 ? N/A A0A0K1H313 30151879
    434986 5z3a:A (1.401) BS01 GOL 3.2.1.205 GO:0000272 ... D2PPM8 34665923
    434987 5z3a:A (1.401) BS02 GOL 3.2.1.205 GO:0000272 ... D2PPM8 34665923
    434988 5z3a:A (1.401) BS03 GOL 3.2.1.205 GO:0000272 ... D2PPM8 34665923
    434989 5z3b:A (1.25) BS01 GOL 3.2.1.205 GO:0000272 ... D2PPM8 34665923
    434990 5z3b:A (1.25) BS02 GOL 3.2.1.205 GO:0000272 ... D2PPM8 34665923
    434991 5z3b:A (1.25) BS03 GOL 3.2.1.205 GO:0000272 ... D2PPM8 34665923
    434992 5z3c:A (1.6) BS01 GOL 3.2.1.205 GO:0000272 ... D2PPM8 34665923
    434993 5z3c:A (1.6) BS02 GOL 3.2.1.205 GO:0000272 ... D2PPM8 34665923
    434994 5z3c:A (1.6) BS03 GOL 3.2.1.205 GO:0000272 ... D2PPM8 34665923
    434995 5z3c:A (1.6) BS04 GOL 3.2.1.205 GO:0000272 ... D2PPM8 34665923
    434996 5z3c:A (1.6) BS05 GOL 3.2.1.205 GO:0000272 ... D2PPM8 34665923
    434997 5z3d:A (1.25) BS01 GOL 3.2.1.205 GO:0000272 ... D2PPM8 34665923
    434998 5z3e:A (1.1) BS01 GOL 3.2.1.205 GO:0000272 ... D2PPM8 34665923
    434999 5z3e:A (1.1) BS02 GOL 3.2.1.205 GO:0000272 ... D2PPM8 34665923
    435000 5z3e:A (1.1) BS03 GOL 3.2.1.205 GO:0000272 ... D2PPM8 34665923

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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