SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    43401 1q3s:F (3.0) BS01 ADP 3.6.4.9 GO:0005524 ... P61112 14729342
    43402 1q3s:G (3.0) BS01 ADP 3.6.4.9 GO:0005524 ... P61112 14729342
    43403 1q3s:H (3.0) BS01 ADP 3.6.4.9 GO:0005524 ... P61112 14729342
    43404 1q3u:A (2.9) BS01 dna ? GO:0003677 ... P06956 12954782
    43405 1q3u:A (2.9) BS02 dna ? GO:0003677 ... P06956 12954782
    43406 1q3u:B (2.9) BS01 dna ? GO:0003677 ... P06956 12954782
    43407 1q3u:B (2.9) BS02 dna ? GO:0003677 ... P06956 12954782
    43408 1q3u:E (2.9) BS01 dna ? GO:0003677 ... P06956 12954782
    43409 1q3u:E (2.9) BS02 dna ? GO:0003677 ... P06956 12954782
    43410 1q3u:F (2.9) BS01 dna ? GO:0003677 ... P06956 12954782
    43411 1q3u:F (2.9) BS02 dna ? GO:0003677 ... P06956 12954782
    43412 1q3v:A (2.91) BS01 dna ? GO:0003677 ... P06956 12954782
    43413 1q3v:A (2.91) BS02 dna ? GO:0003677 ... P06956 12954782
    43414 1q3v:A (2.91) BS03 MG ? GO:0003677 ... P06956 12954782
    43415 1q3v:B (2.91) BS01 dna ? GO:0003677 ... P06956 12954782
    43416 1q3v:B (2.91) BS02 dna ? GO:0003677 ... P06956 12954782
    43417 1q3v:B (2.91) BS03 dna ? GO:0003677 ... P06956 12954782
    43418 1q3v:E (2.91) BS01 dna ? GO:0003677 ... P06956 12954782
    43419 1q3v:E (2.91) BS02 dna ? GO:0003677 ... P06956 12954782
    43420 1q3v:F (2.91) BS01 dna ? GO:0003677 ... P06956 12954782
    43421 1q3v:F (2.91) BS02 dna ? GO:0003677 ... P06956 12954782
    43422 1q3v:F (2.91) BS03 dna ? GO:0003677 ... P06956 12954782
    43423 1q3w:A (2.3) BS01 ATU 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 14529625 MOAD: ic50=4nM
    BindingDB: IC50=4nM
    43424 1q3w:B (2.3) BS01 ATU 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 14529625 MOAD: ic50=4nM
    BindingDB: IC50=4nM
    43425 1q3y:A (-1.00) BS01 ZN N/A GO:0003676 ... P03366 15163759
    43426 1q3y:A (-1.00) BS02 ZN N/A GO:0003676 ... P03366 15163759
    43427 1q3z:A (-1.00) BS01 ZN N/A GO:0003676 ... P03366 15163759
    43428 1q3z:A (-1.00) BS02 ZN N/A GO:0003676 ... P03366 15163759
    43429 1q41:A (2.1) BS01 IXM 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 14529625 MOAD: ic50=22nM
    BindingDB: IC50=200nM
    43430 1q41:B (2.1) BS01 IXM 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 14529625 MOAD: ic50=22nM
    BindingDB: IC50=200nM
    43431 1q43:A (2.0) BS01 CMP ? N/A O88703 12968185
    43432 1q43:B (2.0) BS01 CMP ? N/A O88703 12968185
    43433 1q45:A (2.0) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FUP0 15468319
    43434 1q45:B (2.0) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FUP0 15468319
    43435 1q4g:A (2.0) BS01 BMA 1.14.99.1 GO:0001516 ... P05979 14672659
    43436 1q4g:A (2.0) BS02 BFL 1.14.99.1 GO:0001516 ... P05979 14672659 BindingDB: IC50=32nM, Ki=130nM
    43437 1q4g:A (2.0) BS03 HEM 1.14.99.1 GO:0001516 ... P05979 14672659
    43438 1q4g:A (2.0) BS04 GOL 1.14.99.1 GO:0001516 ... P05979 14672659
    43439 1q4g:A (2.0) BS05 GOL 1.14.99.1 GO:0001516 ... P05979 14672659
    43440 1q4g:B (2.0) BS01 BFL 1.14.99.1 GO:0001516 ... P05979 14672659 BindingDB: IC50=32nM, Ki=130nM
    43441 1q4g:B (2.0) BS02 HEM 1.14.99.1 GO:0001516 ... P05979 14672659
    43442 1q4g:B (2.0) BS03 GOL 1.14.99.1 GO:0001516 ... P05979 14672659
    43443 1q4g:B (2.0) BS04 GOL 1.14.99.1 GO:0001516 ... P05979 14672659
    43444 1q4g:B (2.0) BS05 GOL 1.14.99.1 GO:0001516 ... P05979 14672659
    43445 1q4j:A (2.2) BS01 GTX 2.5.1.18 GO:0004364 ... Q8ILQ7 12972411
    43446 1q4j:A (2.2) BS02 GTX 2.5.1.18 GO:0004364 ... Q8ILQ7 12972411
    43447 1q4j:B (2.2) BS01 GTX 2.5.1.18 GO:0004364 ... Q8ILQ7 12972411
    43448 1q4j:B (2.2) BS02 GTX 2.5.1.18 GO:0004364 ... Q8ILQ7 12972411
    43449 1q4k:A (2.3) BS01 peptide 2.7.11.21 N/A P53350 14592974
    43450 1q4k:B (2.3) BS01 peptide 2.7.11.21 N/A P53350 14592974
    43451 1q4k:C (2.3) BS01 peptide 2.7.11.21 N/A P53350 14592974
    43452 1q4l:A (2.77) BS01 679 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 14529625 BindingDB: IC50=76nM
    43453 1q4l:B (2.77) BS01 679 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 14529625 BindingDB: IC50=76nM
    43454 1q4n:X (2.07) BS01 CA 3.2.1.1 GO:0003824 ... P0DUB6 14678792
    43455 1q4q:A (2.1) BS01 peptide 2.3.2.27 N/A Q24306 14517550
    43456 1q4q:A (2.1) BS02 peptide 2.3.2.27 N/A Q24306 14517550
    43457 1q4q:A (2.1) BS03 ZN 2.3.2.27 N/A Q24306 14517550
    43458 1q4q:B (2.1) BS01 peptide 2.3.2.27 N/A Q24306 14517550
    43459 1q4q:B (2.1) BS02 peptide 2.3.2.27 N/A Q24306 14517550
    43460 1q4q:B (2.1) BS03 ZN 2.3.2.27 N/A Q24306 14517550
    43461 1q4q:C (2.1) BS01 peptide 2.3.2.27 N/A Q24306 14517550
    43462 1q4q:C (2.1) BS02 ZN 2.3.2.27 N/A Q24306 14517550
    43463 1q4q:D (2.1) BS01 peptide 2.3.2.27 N/A Q24306 14517550
    43464 1q4q:D (2.1) BS02 peptide 2.3.2.27 N/A Q24306 14517550
    43465 1q4q:D (2.1) BS03 ZN 2.3.2.27 N/A Q24306 14517550
    43466 1q4q:E (2.1) BS01 peptide 2.3.2.27 N/A Q24306 14517550
    43467 1q4q:E (2.1) BS02 ZN 2.3.2.27 N/A Q24306 14517550
    43468 1q4q:F (2.1) BS01 peptide 2.3.2.27 N/A Q24306 14517550
    43469 1q4q:F (2.1) BS02 peptide 2.3.2.27 N/A Q24306 14517550
    43470 1q4q:F (2.1) BS03 ZN 2.3.2.27 N/A Q24306 14517550
    43471 1q4q:G (2.1) BS01 peptide 2.3.2.27 N/A Q24306 14517550
    43472 1q4q:G (2.1) BS02 ZN 2.3.2.27 N/A Q24306 14517550
    43473 1q4q:H (2.1) BS01 peptide 2.3.2.27 N/A Q24306 14517550
    43474 1q4q:H (2.1) BS02 ZN 2.3.2.27 N/A Q24306 14517550
    43475 1q4q:I (2.1) BS01 peptide 2.3.2.27 N/A Q24306 14517550
    43476 1q4q:I (2.1) BS02 peptide 2.3.2.27 N/A Q24306 14517550
    43477 1q4q:I (2.1) BS03 ZN 2.3.2.27 N/A Q24306 14517550
    43478 1q4q:J (2.1) BS01 peptide 2.3.2.27 N/A Q24306 14517550
    43479 1q4q:J (2.1) BS02 peptide 2.3.2.27 N/A Q24306 14517550
    43480 1q4q:J (2.1) BS03 ZN 2.3.2.27 N/A Q24306 14517550
    43481 1q4r:A (1.9) BS01 MG ? GO:0003674 ... Q9LUV2 15326607
    43482 1q4s:A (1.95) BS01 COA 3.1.2.23 GO:0005829 ... Q04416 12907670
    43483 1q4s:A (1.95) BS02 COA 3.1.2.23 GO:0005829 ... Q04416 12907670
    43484 1q4s:B (1.95) BS01 COA 3.1.2.23 GO:0005829 ... Q04416 12907670
    43485 1q4s:B (1.95) BS02 COA 3.1.2.23 GO:0005829 ... Q04416 12907670
    43486 1q4t:A (1.6) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 12907670 MOAD: Ki=0.003uM
    43487 1q4t:A (1.6) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 12907670 MOAD: Ki=0.003uM
    43488 1q4t:B (1.6) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 12907670 MOAD: Ki=0.003uM
    43489 1q4t:B (1.6) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 12907670 MOAD: Ki=0.003uM
    43490 1q4u:A (1.6) BS01 4CA 3.1.2.23 GO:0005829 ... Q04416 12907670 MOAD: Ki=0.6uM
    43491 1q4u:A (1.6) BS02 4CA 3.1.2.23 GO:0005829 ... Q04416 12907670 MOAD: Ki=0.6uM
    43492 1q4u:B (1.6) BS01 4CA 3.1.2.23 GO:0005829 ... Q04416 12907670
    43493 1q4u:B (1.6) BS02 4CA 3.1.2.23 GO:0005829 ... Q04416 12907670
    43494 1q4v:B (2.0) BS01 peptide ? GO:0005179 ... P01308 14596591
    43495 1q4v:D (2.0) BS01 peptide ? GO:0005179 ... P01308 14596591
    43496 1q4w:A (1.93) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 15050823
    43497 1q4w:A (1.93) BS02 DQU 2.4.2.29 GO:0002099 ... P28720 15050823 MOAD: Ki=0.35uM
    43498 1q4x:A (2.8) BS01 G24 ? GO:0003677 ... P10828 14673100
    43499 1q51:A (2.3) BS01 CAA 4.1.3.36 GO:0005886 ... P9WNP5 12909628
    43500 1q51:B (2.3) BS01 CAA 4.1.3.36 GO:0005886 ... P9WNP5 12909628
    43501 1q51:C (2.3) BS01 CAA 4.1.3.36 GO:0005886 ... P9WNP5 12909628
    43502 1q51:D (2.3) BS01 CAA 4.1.3.36 GO:0005886 ... P9WNP5 12909628
    43503 1q51:E (2.3) BS01 CAA 4.1.3.36 GO:0005886 ... P9WNP5 12909628
    43504 1q51:F (2.3) BS01 CAA 4.1.3.36 GO:0005886 ... P9WNP5 12909628
    43505 1q51:G (2.3) BS01 CAA 4.1.3.36 GO:0005886 ... P9WNP5 12909628
    43506 1q51:H (2.3) BS01 CAA 4.1.3.36 GO:0005886 ... P9WNP5 12909628
    43507 1q51:I (2.3) BS01 CAA 4.1.3.36 GO:0005886 ... P9WNP5 12909628
    43508 1q51:J (2.3) BS01 CAA 4.1.3.36 GO:0005886 ... P9WNP5 12909628
    43509 1q51:K (2.3) BS01 CAA 4.1.3.36 GO:0005886 ... P9WNP5 12909628
    43510 1q51:L (2.3) BS01 CAA 4.1.3.36 GO:0005886 ... P9WNP5 12909628
    43511 1q54:A (1.93) BS01 MN 5.3.3.2 GO:0000287 ... Q46822 12630859
    43512 1q54:A (1.93) BS02 MG 5.3.3.2 GO:0000287 ... Q46822 12630859
    43513 1q54:A (1.93) BS03 BHI 5.3.3.2 GO:0000287 ... Q46822 12630859 MOAD: Ki=1.4uM
    43514 1q54:B (1.93) BS01 MN 5.3.3.2 GO:0000287 ... Q46822 12630859
    43515 1q54:B (1.93) BS02 MG 5.3.3.2 GO:0000287 ... Q46822 12630859
    43516 1q54:B (1.93) BS03 BHI 5.3.3.2 GO:0000287 ... Q46822 12630859 MOAD: Ki=1.4uM
    43517 1q55:A (30.0) BS01 CA N/A GO:0005509 ... N/A 14526082
    43518 1q55:A (30.0) BS02 CA N/A GO:0005509 ... N/A 14526082
    43519 1q55:A (30.0) BS03 CA N/A GO:0005509 ... N/A 14526082
    43520 1q55:A (30.0) BS04 CA N/A GO:0005509 ... N/A 14526082
    43521 1q55:A (30.0) BS05 CA N/A GO:0005509 ... N/A 14526082
    43522 1q55:A (30.0) BS06 CA N/A GO:0005509 ... N/A 14526082
    43523 1q55:A (30.0) BS07 CA N/A GO:0005509 ... N/A 14526082
    43524 1q55:A (30.0) BS08 CA N/A GO:0005509 ... N/A 14526082
    43525 1q55:A (30.0) BS09 CA N/A GO:0005509 ... N/A 14526082
    43526 1q55:A (30.0) BS10 CA N/A GO:0005509 ... N/A 14526082
    43527 1q55:A (30.0) BS11 CA N/A GO:0005509 ... N/A 14526082
    43528 1q55:A (30.0) BS12 CA N/A GO:0005509 ... N/A 14526082
    43529 1q55:B (30.0) BS01 CA N/A GO:0005509 ... N/A 14526082
    43530 1q55:B (30.0) BS02 CA N/A GO:0005509 ... N/A 14526082
    43531 1q55:B (30.0) BS03 CA N/A GO:0005509 ... N/A 14526082
    43532 1q55:B (30.0) BS04 CA N/A GO:0005509 ... N/A 14526082
    43533 1q55:B (30.0) BS05 CA N/A GO:0005509 ... N/A 14526082
    43534 1q55:B (30.0) BS06 CA N/A GO:0005509 ... N/A 14526082
    43535 1q55:B (30.0) BS07 CA N/A GO:0005509 ... N/A 14526082
    43536 1q55:B (30.0) BS08 CA N/A GO:0005509 ... N/A 14526082
    43537 1q55:B (30.0) BS09 CA N/A GO:0005509 ... N/A 14526082
    43538 1q55:B (30.0) BS10 CA N/A GO:0005509 ... N/A 14526082
    43539 1q55:B (30.0) BS11 CA N/A GO:0005509 ... N/A 14526082
    43540 1q55:B (30.0) BS12 CA N/A GO:0005509 ... N/A 14526082
    43541 1q55:C (30.0) BS01 CA N/A GO:0005509 ... N/A 14526082
    43542 1q55:C (30.0) BS02 CA N/A GO:0005509 ... N/A 14526082
    43543 1q55:C (30.0) BS03 CA N/A GO:0005509 ... N/A 14526082
    43544 1q55:C (30.0) BS04 CA N/A GO:0005509 ... N/A 14526082
    43545 1q55:C (30.0) BS05 CA N/A GO:0005509 ... N/A 14526082
    43546 1q55:C (30.0) BS06 CA N/A GO:0005509 ... N/A 14526082
    43547 1q55:C (30.0) BS07 CA N/A GO:0005509 ... N/A 14526082
    43548 1q55:C (30.0) BS08 CA N/A GO:0005509 ... N/A 14526082
    43549 1q55:C (30.0) BS09 CA N/A GO:0005509 ... N/A 14526082
    43550 1q55:C (30.0) BS10 CA N/A GO:0005509 ... N/A 14526082
    43551 1q55:C (30.0) BS11 CA N/A GO:0005509 ... N/A 14526082
    43552 1q55:C (30.0) BS12 CA N/A GO:0005509 ... N/A 14526082
    43553 1q55:D (30.0) BS01 CA N/A GO:0005509 ... N/A 14526082
    43554 1q55:D (30.0) BS02 CA N/A GO:0005509 ... N/A 14526082
    43555 1q55:D (30.0) BS03 CA N/A GO:0005509 ... N/A 14526082
    43556 1q55:D (30.0) BS04 CA N/A GO:0005509 ... N/A 14526082
    43557 1q55:D (30.0) BS05 CA N/A GO:0005509 ... N/A 14526082
    43558 1q55:D (30.0) BS06 CA N/A GO:0005509 ... N/A 14526082
    43559 1q55:D (30.0) BS07 CA N/A GO:0005509 ... N/A 14526082
    43560 1q55:D (30.0) BS08 CA N/A GO:0005509 ... N/A 14526082
    43561 1q55:D (30.0) BS09 CA N/A GO:0005509 ... N/A 14526082
    43562 1q55:D (30.0) BS10 CA N/A GO:0005509 ... N/A 14526082
    43563 1q55:D (30.0) BS11 CA N/A GO:0005509 ... N/A 14526082
    43564 1q55:D (30.0) BS12 CA N/A GO:0005509 ... N/A 14526082
    43565 1q5a:A (30.0) BS01 CA N/A GO:0005509 ... N/A 14526082
    43566 1q5a:A (30.0) BS02 CA N/A GO:0005509 ... N/A 14526082
    43567 1q5a:A (30.0) BS03 CA N/A GO:0005509 ... N/A 14526082
    43568 1q5a:A (30.0) BS04 CA N/A GO:0005509 ... N/A 14526082
    43569 1q5a:A (30.0) BS05 CA N/A GO:0005509 ... N/A 14526082
    43570 1q5a:A (30.0) BS06 CA N/A GO:0005509 ... N/A 14526082
    43571 1q5a:A (30.0) BS07 CA N/A GO:0005509 ... N/A 14526082
    43572 1q5a:A (30.0) BS08 CA N/A GO:0005509 ... N/A 14526082
    43573 1q5a:A (30.0) BS09 CA N/A GO:0005509 ... N/A 14526082
    43574 1q5a:A (30.0) BS10 CA N/A GO:0005509 ... N/A 14526082
    43575 1q5a:A (30.0) BS11 CA N/A GO:0005509 ... N/A 14526082
    43576 1q5a:A (30.0) BS12 CA N/A GO:0005509 ... N/A 14526082
    43577 1q5a:B (30.0) BS01 CA N/A GO:0005509 ... N/A 14526082
    43578 1q5a:B (30.0) BS02 CA N/A GO:0005509 ... N/A 14526082
    43579 1q5a:B (30.0) BS03 CA N/A GO:0005509 ... N/A 14526082
    43580 1q5a:B (30.0) BS04 CA N/A GO:0005509 ... N/A 14526082
    43581 1q5a:B (30.0) BS05 CA N/A GO:0005509 ... N/A 14526082
    43582 1q5a:B (30.0) BS06 CA N/A GO:0005509 ... N/A 14526082
    43583 1q5a:B (30.0) BS07 CA N/A GO:0005509 ... N/A 14526082
    43584 1q5a:B (30.0) BS08 CA N/A GO:0005509 ... N/A 14526082
    43585 1q5a:B (30.0) BS09 CA N/A GO:0005509 ... N/A 14526082
    43586 1q5a:B (30.0) BS10 CA N/A GO:0005509 ... N/A 14526082
    43587 1q5a:B (30.0) BS11 CA N/A GO:0005509 ... N/A 14526082
    43588 1q5a:B (30.0) BS12 CA N/A GO:0005509 ... N/A 14526082
    43589 1q5b:A (30.0) BS01 CA N/A GO:0005509 ... N/A 14526082
    43590 1q5b:A (30.0) BS02 CA N/A GO:0005509 ... N/A 14526082
    43591 1q5b:A (30.0) BS03 CA N/A GO:0005509 ... N/A 14526082
    43592 1q5b:A (30.0) BS04 CA N/A GO:0005509 ... N/A 14526082
    43593 1q5b:A (30.0) BS05 CA N/A GO:0005509 ... N/A 14526082
    43594 1q5b:A (30.0) BS06 CA N/A GO:0005509 ... N/A 14526082
    43595 1q5b:A (30.0) BS07 CA N/A GO:0005509 ... N/A 14526082
    43596 1q5b:A (30.0) BS08 CA N/A GO:0005509 ... N/A 14526082
    43597 1q5b:A (30.0) BS09 CA N/A GO:0005509 ... N/A 14526082
    43598 1q5b:A (30.0) BS10 CA N/A GO:0005509 ... N/A 14526082
    43599 1q5b:A (30.0) BS11 CA N/A GO:0005509 ... N/A 14526082
    43600 1q5b:A (30.0) BS12 CA N/A GO:0005509 ... N/A 14526082

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).