SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 2209 2210 2211 2212 2213 2214 2215 2216 2217 2218 2219 2220 2221 2222 2223 2224 2225 2226 2227 2228 2229 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    443601 6b47:A (3.2) BS01 rna ? GO:0005515 ... Q02ML9 28985564
    443602 6b47:B (3.2) BS01 rna ? GO:0005515 ... Q02MM0 28985564
    443603 6b47:C (3.2) BS01 rna ? GO:0005515 ... Q02MM1 28985564
    443604 6b47:D (3.2) BS01 rna ? GO:0005515 ... Q02MM1 28985564
    443605 6b47:E (3.2) BS01 rna ? GO:0005515 ... Q02MM1 28985564
    443606 6b47:F (3.2) BS01 rna ? GO:0005515 ... Q02MM1 28985564
    443607 6b47:G (3.2) BS01 rna ? GO:0005515 ... Q02MM1 28985564
    443608 6b47:H (3.2) BS01 rna ? GO:0005515 ... Q02MM1 28985564
    443609 6b47:L (3.2) BS01 rna 3.1.-.- GO:0003723 ... Q02MM2 28985564
    443610 6b48:A (3.6) BS01 rna ? GO:0005515 ... Q02ML9 28985564
    443611 6b48:B (3.6) BS01 rna ? GO:0005515 ... Q02MM0 28985564
    443612 6b48:C (3.6) BS01 rna ? GO:0005515 ... Q02MM1 28985564
    443613 6b48:D (3.6) BS01 rna ? GO:0005515 ... Q02MM1 28985564
    443614 6b48:E (3.6) BS01 rna ? GO:0005515 ... Q02MM1 28985564
    443615 6b48:F (3.6) BS01 rna ? GO:0005515 ... Q02MM1 28985564
    443616 6b48:G (3.6) BS01 rna ? GO:0005515 ... Q02MM1 28985564
    443617 6b48:H (3.6) BS01 rna ? GO:0005515 ... Q02MM1 28985564
    443618 6b48:L (3.6) BS01 rna 3.1.-.- GO:0003723 ... Q02MM2 28985564
    443619 6b4d:A (1.196) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 28947941
    443620 6b4d:A (1.196) BS02 53X 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 28947941 MOAD: Ki=0.78uM
    BindingDB: Ki=780nM
    443621 6b4e:A (1.75) BS01 PRO ? GO:0005643 ... Q12315 29899397
    443622 6b4e:D (1.75) BS01 PRO ? N/A P49686 29899397
    443623 6b4h:A (2.17) BS01 IHP ? GO:0005643 ... G0S7F3 29899397
    443624 6b4h:A (2.17) BS02 IHP ? GO:0005643 ... G0S7F3 29899397
    443625 6b4h:C (2.17) BS01 IHP ? GO:0005643 ... G0S7F3 29899397
    443626 6b4h:C (2.17) BS02 IHP ? GO:0005643 ... G0S7F3 29899397
    443627 6b4i:E (3.619) BS01 ADP 3.6.4.13 GO:0003676 ... Q9UMR2 29899397
    443628 6b4i:F (3.619) BS01 ADP 3.6.4.13 GO:0003676 ... Q9UMR2 29899397
    443629 6b4j:E (3.4) BS01 MG 3.6.4.13 GO:0003676 ... Q9UMR2 29899397
    443630 6b4j:E (3.4) BS02 ANP 3.6.4.13 GO:0003676 ... Q9UMR2 29899397
    443631 6b4j:F (3.4) BS01 MG 3.6.4.13 GO:0003676 ... Q9UMR2 29899397
    443632 6b4j:F (3.4) BS02 ANP 3.6.4.13 GO:0003676 ... Q9UMR2 29899397
    443633 6b4k:A (2.2) BS01 ANP 3.6.4.13 GO:0003676 ... Q9UMR2 29899397
    443634 6b4k:B (2.2) BS01 ANP 3.6.4.13 GO:0003676 ... Q9UMR2 29899397
    443635 6b4l:A (2.25) BS01 CJY ? GO:0042981 ... Q07820 25679114 MOAD: Ki=0.34uM
    BindingDB: Ki=7300nM
    443636 6b4l:B (2.25) BS01 CJY ? GO:0042981 ... Q07820 25679114 MOAD: Ki=0.34uM
    BindingDB: Ki=7300nM
    443637 6b4n:A (1.3) BS01 G53 3.1.13.2
    3.1.26.13
    GO:0004190 ... Q72498 29110408 MOAD: Ki=27.9pM
    443638 6b4n:B (1.3) BS01 G53 3.1.13.2
    3.1.26.13
    GO:0004190 ... Q72498 29110408
    443639 6b4o:A (1.73) BS01 FAD 1.8.1.7'
    '3.3.1.1
    GO:0000166 ... Q82Z09 N/A
    443640 6b4o:B (1.73) BS01 FAD 1.8.1.7'
    '3.3.1.1
    GO:0000166 ... Q82Z09 N/A
    443641 6b4o:C (1.73) BS01 FAD 1.8.1.7'
    '3.3.1.1
    GO:0000166 ... Q82Z09 N/A
    443642 6b4o:D (1.73) BS01 FAD 1.8.1.7'
    '3.3.1.1
    GO:0000166 ... Q82Z09 N/A
    443643 6b4q:A (1.6) BS01 CQG 2.4.2.1 GO:0003824 ... A0A0U3AGT1 N/A
    443644 6b4t:A (1.51) BS01 CQJ 2.4.2.1 GO:0003824 ... A0A0U3AGT1 N/A
    443645 6b4u:A (1.95) BS01 CN7 ? GO:0042981 ... Q07820 25679114 MOAD: Ki=21nM
    BindingDB: Ki=1230nM
    443646 6b4v:AA (3.4) BS01 rna ? GO:0003735 ... Q72I22 29366636
    443647 6b4v:AA (3.4) BS02 rna ? GO:0003735 ... Q72I22 29366636
    443648 6b4v:AB (3.4) BS01 rna ? GO:0003735 ... P62659 29366636
    443649 6b4v:AC (3.4) BS01 rna ? GO:0003723 ... Q72IA7 29366636
    443650 6b4v:AC (3.4) BS02 rna ? GO:0003723 ... Q72IA7 29366636
    443651 6b4v:AD (3.4) BS01 rna ? GO:0003735 ... P62656 29366636
    443652 6b4v:BA (3.4) BS01 rna ? GO:0003735 ... Q72JR0 29366636
    443653 6b4v:BB (3.4) BS01 rna ? GO:0000028 ... P62660 29366636
    443654 6b4v:BC (3.4) BS01 rna ? GO:0003735 ... Q72HR3 29366636
    443655 6b4v:BC (3.4) BS02 rna ? GO:0003735 ... Q72HR3 29366636
    443656 6b4v:BC (3.4) BS03 rna ? GO:0003735 ... Q72HR3 29366636
    443657 6b4v:BC (3.4) BS04 MG ? GO:0003735 ... Q72HR3 29366636
    443658 6b4v:BD (3.4) BS01 rna ? GO:0003735 ... P62657 29366636
    443659 6b4v:BD (3.4) BS02 rna ? GO:0003735 ... P62657 29366636
    443660 6b4v:CA (3.4) BS01 rna ? GO:0003735 ... P62652 29366636
    443661 6b4v:CA (3.4) BS02 ZN ? GO:0003735 ... P62652 29366636
    443662 6b4v:CB (3.4) BS01 rna ? GO:0003723 ... P62661 29366636
    443663 6b4v:CC (3.4) BS01 rna ? GO:0003735 ... Q72G84 29366636
    443664 6b4v:CC (3.4) BS02 rna ? GO:0003735 ... Q72G84 29366636
    443665 6b4v:CD (3.4) BS01 rna ? GO:0003735 ... P62238 29366636
    443666 6b4v:DA (3.4) BS01 rna ? GO:0003735 ... Q72GW3 29366636
    443667 6b4v:DC (3.4) BS01 rna ? GO:0003735 ... Q72I12 29366636
    443668 6b4v:DD (3.4) BS01 rna ? GO:0003735 ... P62658 29366636
    443669 6b4v:E (3.4) BS01 rna ? GO:0002181 ... Q72I07 29366636
    443670 6b4v:EA (3.4) BS01 rna ? GO:0003735 ... P80340 29366636
    443671 6b4v:EC (3.4) BS01 rna ? GO:0003735 ... Q72I22 29366636
    443672 6b4v:EC (3.4) BS02 rna ? GO:0003735 ... Q72I22 29366636
    443673 6b4v:ED (3.4) BS01 rna ? GO:0003735 ... P62659 29366636
    443674 6b4v:F (3.4) BS01 rna ? GO:0003735 ... Q72I04 29366636
    443675 6b4v:FA (3.4) BS01 rna ? GO:0003735 ... Q72L77 29366636
    443676 6b4v:FC (3.4) BS01 rna ? GO:0003735 ... Q72JR0 29366636
    443677 6b4v:FD (3.4) BS01 rna ? GO:0000028 ... P62660 29366636
    443678 6b4v:G (3.4) BS01 rna ? GO:0003735 ... Q72I05 29366636
    443679 6b4v:G (3.4) BS02 MG ? GO:0003735 ... Q72I05 29366636
    443680 6b4v:GA (3.4) BS01 rna ? GO:0003735 ... Q72I28 29366636
    443681 6b4v:GA (3.4) BS02 ZN ? GO:0003735 ... Q72I28 29366636
    443682 6b4v:GC (3.4) BS01 rna ? GO:0003735 ... P62652 29366636
    443683 6b4v:GC (3.4) BS02 ZN ? GO:0003735 ... P62652 29366636
    443684 6b4v:GD (3.4) BS01 rna ? GO:0003723 ... P62661 29366636
    443685 6b4v:H (3.4) BS01 rna ? GO:0000049 ... Q72I16 29366636
    443686 6b4v:H (3.4) BS02 rna ? GO:0000049 ... Q72I16 29366636
    443687 6b4v:H (3.4) BS03 rna ? GO:0000049 ... Q72I16 29366636
    443688 6b4v:HC (3.4) BS01 rna ? GO:0003735 ... Q72GW3 29366636
    443689 6b4v:I (3.4) BS01 rna ? GO:0002181 ... Q72I19 29366636
    443690 6b4v:I (3.4) BS02 MG ? GO:0002181 ... Q72I19 29366636
    443691 6b4v:IB (3.4) BS01 rna ? GO:0002181 ... Q72I07 29366636
    443692 6b4v:IC (3.4) BS01 rna ? GO:0003735 ... P80340 29366636
    443693 6b4v:J (3.4) BS01 rna ? GO:0003735 ... Q72GV5 29366636
    443694 6b4v:JA (3.4) BS01 rna ? GO:0003747 ... P0A7I0 29366636
    443695 6b4v:JA (3.4) BS02 rna ? GO:0003747 ... P0A7I0 29366636
    443696 6b4v:JA (3.4) BS03 rna ? GO:0003747 ... P0A7I0 29366636
    443697 6b4v:JA (3.4) BS04 rna ? GO:0003747 ... P0A7I0 29366636
    443698 6b4v:JA (3.4) BS05 MG ? GO:0003747 ... P0A7I0 29366636
    443699 6b4v:JB (3.4) BS01 rna ? GO:0003735 ... Q72I04 29366636
    443700 6b4v:JC (3.4) BS01 rna ? GO:0003735 ... Q72L77 29366636
    443701 6b4v:K (3.4) BS01 rna ? GO:0003729 ... Q72IN1 29366636
    443702 6b4v:K (3.4) BS02 MG ? GO:0003729 ... Q72IN1 29366636
    443703 6b4v:KA (3.4) BS01 rna ? GO:0003735 ... P62662 29366636
    443704 6b4v:KB (3.4) BS01 rna ? GO:0003735 ... Q72I05 29366636
    443705 6b4v:KB (3.4) BS02 MG ? GO:0003735 ... Q72I05 29366636
    443706 6b4v:KC (3.4) BS01 rna ? GO:0003735 ... Q72I28 29366636
    443707 6b4v:KC (3.4) BS02 ZN ? GO:0003735 ... Q72I28 29366636
    443708 6b4v:L (3.4) BS01 rna ? GO:0003735 ... Q72I14 29366636
    443709 6b4v:L (3.4) BS02 rna ? GO:0003735 ... Q72I14 29366636
    443710 6b4v:LA (3.4) BS01 rna ? GO:0003676 ... P62663 29366636
    443711 6b4v:LB (3.4) BS01 rna ? GO:0000049 ... Q72I16 29366636
    443712 6b4v:LB (3.4) BS02 rna ? GO:0000049 ... Q72I16 29366636
    443713 6b4v:LB (3.4) BS03 rna ? GO:0000049 ... Q72I16 29366636
    443714 6b4v:M (3.4) BS01 rna ? GO:0003735 ... Q72I23 29366636
    443715 6b4v:MA (3.4) BS01 rna ? GO:0003723 ... P62664 29366636
    443716 6b4v:MA (3.4) BS02 MG ? GO:0003723 ... P62664 29366636
    443717 6b4v:MA (3.4) BS03 MG ? GO:0003723 ... P62664 29366636
    443718 6b4v:MB (3.4) BS01 rna ? GO:0002181 ... Q72I19 29366636
    443719 6b4v:MB (3.4) BS02 MG ? GO:0002181 ... Q72I19 29366636
    443720 6b4v:N (3.4) BS01 rna ? GO:0000049 ... Q72I11 29366636
    443721 6b4v:N (3.4) BS02 rna ? GO:0000049 ... Q72I11 29366636
    443722 6b4v:NA (3.4) BS01 rna ? GO:0003723 ... P62665 29366636
    443723 6b4v:NB (3.4) BS01 rna ? GO:0003735 ... Q72GV5 29366636
    443724 6b4v:NB (3.4) BS02 MG ? GO:0003735 ... Q72GV5 29366636
    443725 6b4v:NC (3.4) BS01 rna ? GO:0003747 ... P0A7I0 29366636
    443726 6b4v:NC (3.4) BS02 rna ? GO:0003747 ... P0A7I0 29366636
    443727 6b4v:NC (3.4) BS03 rna ? GO:0003747 ... P0A7I0 29366636
    443728 6b4v:NC (3.4) BS04 rna ? GO:0003747 ... P0A7I0 29366636
    443729 6b4v:O (3.4) BS01 rna ? GO:0003735 ... Q72I33 29366636
    443730 6b4v:OA (3.4) BS01 rna ? GO:0003735 ... P62666 29366636
    443731 6b4v:OB (3.4) BS01 rna ? GO:0003729 ... Q72IN1 29366636
    443732 6b4v:OC (3.4) BS01 rna ? GO:0003735 ... P62662 29366636
    443733 6b4v:P (3.4) BS01 rna ? GO:0003735 ... Q72I20 29366636
    443734 6b4v:P (3.4) BS02 rna ? GO:0003735 ... Q72I20 29366636
    443735 6b4v:PA (3.4) BS01 rna ? GO:0000049 ... P62667 29366636
    443736 6b4v:PA (3.4) BS02 rna ? GO:0000049 ... P62667 29366636
    443737 6b4v:PA (3.4) BS03 rna ? GO:0000049 ... P62667 29366636
    443738 6b4v:PB (3.4) BS01 rna ? GO:0003735 ... Q72I14 29366636
    443739 6b4v:PB (3.4) BS02 rna ? GO:0003735 ... Q72I14 29366636
    443740 6b4v:PC (3.4) BS01 rna ? GO:0003676 ... P62663 29366636
    443741 6b4v:Q (3.4) BS01 rna ? GO:0003735 ... Q72JU9 29366636
    443742 6b4v:Q (3.4) BS02 rna ? GO:0003735 ... Q72JU9 29366636
    443743 6b4v:QA (3.4) BS01 rna ? GO:0003735 ... P62668 29366636
    443744 6b4v:QB (3.4) BS01 rna ? GO:0003735 ... Q72I23 29366636
    443745 6b4v:QC (3.4) BS01 rna ? GO:0003723 ... P62664 29366636
    443746 6b4v:QC (3.4) BS02 MG ? GO:0003723 ... P62664 29366636
    443747 6b4v:R (3.4) BS01 rna ? GO:0000027 ... Q72L76 29366636
    443748 6b4v:RA (3.4) BS01 rna ? GO:0000049 ... P62669 29366636
    443749 6b4v:RB (3.4) BS01 rna ? GO:0000049 ... Q72I11 29366636
    443750 6b4v:RB (3.4) BS02 rna ? GO:0000049 ... Q72I11 29366636
    443751 6b4v:RC (3.4) BS01 rna ? GO:0003723 ... P62665 29366636
    443752 6b4v:RC (3.4) BS02 MG ? GO:0003723 ... P62665 29366636
    443753 6b4v:S (3.4) BS01 rna ? GO:0003723 ... Q72HR2 29366636
    443754 6b4v:SA (3.4) BS01 rna ? GO:0000049 ... P62653 29366636
    443755 6b4v:SB (3.4) BS01 rna ? GO:0003735 ... Q72I33 29366636
    443756 6b4v:SC (3.4) BS01 rna ? GO:0003735 ... P62666 29366636
    443757 6b4v:T (3.4) BS01 rna ? GO:0003735 ... Q72I09 29366636
    443758 6b4v:TA (3.4) BS01 rna ? GO:0003735 ... P62654 29366636
    443759 6b4v:TB (3.4) BS01 rna ? GO:0003735 ... Q72I20 29366636
    443760 6b4v:TB (3.4) BS02 rna ? GO:0003735 ... Q72I20 29366636
    443761 6b4v:TC (3.4) BS01 rna ? GO:0000049 ... P62667 29366636
    443762 6b4v:TC (3.4) BS02 rna ? GO:0000049 ... P62667 29366636
    443763 6b4v:TC (3.4) BS03 rna ? GO:0000049 ... P62667 29366636
    443764 6b4v:U (3.4) BS01 rna ? GO:0003735 ... Q72I06 29366636
    443765 6b4v:U (3.4) BS02 MG ? GO:0003735 ... Q72I06 29366636
    443766 6b4v:UA (3.4) BS01 rna ? GO:0000049 ... P61941 29366636
    443767 6b4v:UB (3.4) BS01 rna ? GO:0003735 ... Q72JU9 29366636
    443768 6b4v:UB (3.4) BS02 rna ? GO:0003735 ... Q72JU9 29366636
    443769 6b4v:UB (3.4) BS03 MG ? GO:0003735 ... Q72JU9 29366636
    443770 6b4v:UC (3.4) BS01 rna ? GO:0003735 ... P62668 29366636
    443771 6b4v:V (3.4) BS01 rna ? GO:0003723 ... Q72I15 29366636
    443772 6b4v:V (3.4) BS02 ZN ? GO:0003723 ... Q72I15 29366636
    443773 6b4v:VA (3.4) BS01 rna ? GO:0000049 ... P62655 29366636
    443774 6b4v:VB (3.4) BS01 rna ? GO:0000027 ... Q72L76 29366636
    443775 6b4v:VC (3.4) BS01 rna ? GO:0000049 ... P62669 29366636
    443776 6b4v:VC (3.4) BS02 MG ? GO:0000049 ... P62669 29366636
    443777 6b4v:W (3.4) BS01 rna ? GO:0003723 ... Q72IA7 29366636
    443778 6b4v:W (3.4) BS02 rna ? GO:0003723 ... Q72IA7 29366636
    443779 6b4v:WA (3.4) BS01 rna ? GO:0003735 ... P62656 29366636
    443780 6b4v:WB (3.4) BS01 rna ? GO:0003723 ... Q72HR2 29366636
    443781 6b4v:WC (3.4) BS01 rna ? GO:0000049 ... P62653 29366636
    443782 6b4v:X (3.4) BS01 rna ? GO:0003735 ... Q72HR3 29366636
    443783 6b4v:X (3.4) BS02 rna ? GO:0003735 ... Q72HR3 29366636
    443784 6b4v:X (3.4) BS03 rna ? GO:0003735 ... Q72HR3 29366636
    443785 6b4v:XA (3.4) BS01 rna ? GO:0003735 ... P62657 29366636
    443786 6b4v:XA (3.4) BS02 rna ? GO:0003735 ... P62657 29366636
    443787 6b4v:XB (3.4) BS01 rna ? GO:0003735 ... Q72I09 29366636
    443788 6b4v:XC (3.4) BS01 rna ? GO:0003735 ... P62654 29366636
    443789 6b4v:Y (3.4) BS01 rna ? GO:0003735 ... Q72G84 29366636
    443790 6b4v:Y (3.4) BS02 rna ? GO:0003735 ... Q72G84 29366636
    443791 6b4v:YA (3.4) BS01 rna ? GO:0003735 ... P62238 29366636
    443792 6b4v:YB (3.4) BS01 rna ? GO:0003735 ... Q72I06 29366636
    443793 6b4v:YC (3.4) BS01 rna ? GO:0000049 ... P61941 29366636
    443794 6b4v:Z (3.4) BS01 rna ? GO:0003735 ... Q72I12 29366636
    443795 6b4v:ZA (3.4) BS01 rna ? GO:0003735 ... P62658 29366636
    443796 6b4v:ZB (3.4) BS01 rna ? GO:0003723 ... Q72I15 29366636
    443797 6b4v:ZB (3.4) BS02 ZN ? GO:0003723 ... Q72I15 29366636
    443798 6b4v:ZC (3.4) BS01 rna ? GO:0000049 ... P62655 29366636
    443799 6b4w:A (2.9) BS01 CQ7 2.7.12.1 GO:0004672 ... P33981 28991472 BindingDB: IC50=57nM
    443800 6b4x:A (1.46) BS01 A3P 2.8.2.- GO:0016740 ... G4VLE5 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).