SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    444201 6b8m:H (2.3) BS01 CA ? GO:0000086 ... P0DP23 29429937
    444202 6b8m:H (2.3) BS02 CA ? GO:0000086 ... P0DP23 29429937
    444203 6b8n:B (2.201) BS01 CA ? GO:0000086 ... P0DP23 29429937
    444204 6b8n:D (2.201) BS01 CA ? GO:0000086 ... P0DP23 29429937
    444205 6b8n:F (2.201) BS01 CA ? GO:0000086 ... P0DP23 29429937
    444206 6b8n:H (2.201) BS01 CA ? GO:0000086 ... P0DP23 29429937
    444207 6b8o:A (2.2) BS01 PSF ? N/A Q9NZC2 29794134
    444208 6b8o:B (2.2) BS01 PSF ? N/A Q9NZC2 29794134
    444209 6b8o:C (2.2) BS01 PSF ? N/A Q9NZC2 29794134
    444210 6b8o:D (2.2) BS01 PSF ? N/A Q9NZC2 29794134
    444211 6b8o:E (2.2) BS01 PSF ? N/A Q9NZC2 29794134
    444212 6b8o:F (2.2) BS01 PSF ? N/A Q9NZC2 29794134
    444213 6b8p:B (2.2) BS01 MG ? GO:0000086 ... P0DP23 29429937
    444214 6b8p:D (2.2) BS01 MG ? GO:0000086 ... P0DP23 29429937
    444215 6b8p:F (2.2) BS01 MG ? GO:0000086 ... P0DP23 29429937
    444216 6b8p:H (2.2) BS01 MG ? GO:0000086 ... P0DP23 29429937
    444217 6b8q:B (2.6) BS01 MG ? GO:0000086 ... P0DP23 29429937
    444218 6b8q:B (2.6) BS02 MG ? GO:0000086 ... P0DP23 29429937
    444219 6b8q:B (2.6) BS03 MG ? GO:0000086 ... P0DP23 29429937
    444220 6b8q:D (2.6) BS01 MG ? GO:0000086 ... P0DP23 29429937
    444221 6b8q:D (2.6) BS02 MG ? GO:0000086 ... P0DP23 29429937
    444222 6b8q:D (2.6) BS03 MG ? GO:0000086 ... P0DP23 29429937
    444223 6b8q:D (2.6) BS04 MG ? GO:0000086 ... P0DP23 29429937
    444224 6b8q:F (2.6) BS01 MG ? GO:0000086 ... P0DP23 29429937
    444225 6b8q:F (2.6) BS02 MG ? GO:0000086 ... P0DP23 29429937
    444226 6b8q:F (2.6) BS03 MG ? GO:0000086 ... P0DP23 29429937
    444227 6b8q:F (2.6) BS04 MG ? GO:0000086 ... P0DP23 29429937
    444228 6b8q:H (2.6) BS01 MG ? GO:0000086 ... P0DP23 29429937
    444229 6b8q:H (2.6) BS02 MG ? GO:0000086 ... P0DP23 29429937
    444230 6b8q:H (2.6) BS03 MG ? GO:0000086 ... P0DP23 29429937
    444231 6b8q:H (2.6) BS04 MG ? GO:0000086 ... P0DP23 29429937
    444232 6b8q:H (2.6) BS05 MG ? GO:0000086 ... P0DP23 29429937
    444233 6b8r:A (1.65) BS01 CA 3.1.31.1 GO:0003676 ... P00644 29466010
    444234 6b8r:A (1.65) BS02 THP 3.1.31.1 GO:0003676 ... P00644 29466010
    444235 6b8s:A (2.25) BS01 FMN 1.3.5.2 GO:0004152 ... B5Z6I2 N/A
    444236 6b8s:B (2.25) BS01 FMN 1.3.5.2 GO:0004152 ... B5Z6I2 N/A
    444237 6b8u:A (2.68) BS01 8EN 2.7.11.1 GO:0004672 ... P15056 29107542 BindingDB: IC50=0.200000nM, EC50=230nM
    444238 6b8u:B (2.68) BS01 8EN 2.7.11.1 GO:0004672 ... P15056 29107542 BindingDB: IC50=0.200000nM, EC50=230nM
    444239 6b8w:B (1.9) BS01 MN ? N/A A0A0H3CJW2 N/A
    444240 6b8y:A (1.65) BS01 D0A 2.7.11.30 GO:0004672 ... P36897 29422332 BindingDB: IC50=0.550000nM, Ki=0.220000nM
    444241 6b8z:A (1.8) BS01 FRJ 3.1.3.48 GO:0004725 ... P18031 29877794 BindingDB: IC50=8000nM
    444242 6b92:A (2.1) BS01 SAH 2.1.1.346
    2.1.1.348
    GO:0008168 ... Q86W50 29593291
    444243 6b94:A (1.8) BS01 FRU ? GO:0002317 ... P09382 29888844
    444244 6b94:A (1.8) BS02 GAL ? GO:0002317 ... P09382 29888844
    444245 6b94:B (1.8) BS01 FRU ? GO:0002317 ... P09382 29888844
    444246 6b94:B (1.8) BS02 GAL ? GO:0002317 ... P09382 29888844
    444247 6b95:A (1.95) BS01 D0P 3.1.3.48 GO:0004725 ... P18031 29877794
    444248 6b96:A (1.88) BS01 ZN 3.1.4.17 GO:0004114 ... O00408 29113762
    444249 6b96:A (1.88) BS02 CZV 3.1.4.17 GO:0004114 ... O00408 29113762 MOAD: Ki=14.3nM
    BindingDB: Ki=14nM
    444250 6b96:B (1.88) BS01 ZN 3.1.4.17 GO:0004114 ... O00408 29113762
    444251 6b96:B (1.88) BS02 CZV 3.1.4.17 GO:0004114 ... O00408 29113762 MOAD: Ki=14.3nM
    BindingDB: Ki=14nM
    444252 6b97:A (1.76) BS01 ZN 3.1.4.17 GO:0004114 ... O00408 29113762
    444253 6b97:A (1.76) BS02 CZY 3.1.4.17 GO:0004114 ... O00408 29113762 MOAD: Ki=0.237uM
    BindingDB: Ki=237nM
    444254 6b97:B (1.76) BS01 ZN 3.1.4.17 GO:0004114 ... O00408 29113762
    444255 6b97:B (1.76) BS02 CZY 3.1.4.17 GO:0004114 ... O00408 29113762 MOAD: Ki=0.237uM
    BindingDB: Ki=237nM
    444256 6b98:A (1.97) BS01 ZN 3.1.4.17 GO:0004114 ... O00408 29113762
    444257 6b98:A (1.97) BS02 D07 3.1.4.17 GO:0004114 ... O00408 29113762 MOAD: Ki=22.4uM
    BindingDB: Ki=22400nM
    444258 6b98:B (1.97) BS01 ZN 3.1.4.17 GO:0004114 ... O00408 29113762
    444259 6b98:B (1.97) BS02 D07 3.1.4.17 GO:0004114 ... O00408 29113762 MOAD: Ki=22.4uM
    BindingDB: Ki=22400nM
    444260 6b99:A (1.60238) BS01 NEC 3.6.4.10 GO:0005524 ... P07900 N/A
    444261 6b9a:A (1.65381) BS01 PA7 3.6.4.10 GO:0005524 ... P07900 N/A
    444262 6b9b:A (1.8) BS01 GLC 1.11.1.21 GO:0004096 ... Q3JNW6 29732452
    444263 6b9b:A (1.8) BS02 GLC 1.11.1.21 GO:0004096 ... Q3JNW6 29732452
    444264 6b9b:A (1.8) BS03 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 29732452
    444265 6b9b:A (1.8) BS04 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 29732452
    444266 6b9b:B (1.8) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 29732452
    444267 6b9b:B (1.8) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 29732452
    444268 6b9d:A (1.95) BS01 GDP 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444269 6b9d:A (1.95) BS02 MG 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444270 6b9d:B (1.95) BS01 GDP 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444271 6b9d:B (1.95) BS02 MG 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444272 6b9e:A (1.99) BS01 GDP 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444273 6b9e:A (1.99) BS02 MG 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444274 6b9e:B (1.99) BS01 GDP 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444275 6b9e:B (1.99) BS02 MG 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444276 6b9f:A (1.9) BS01 MG 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444277 6b9f:A (1.9) BS02 GDP 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444278 6b9f:A (1.9) BS03 ALF 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444279 6b9f:B (1.9) BS01 MG 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444280 6b9f:B (1.9) BS02 GDP 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444281 6b9f:B (1.9) BS03 ALF 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444282 6b9g:A (3.0) BS01 GDP 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444283 6b9g:B (3.0) BS01 GDP 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444284 6b9g:C (3.0) BS01 GDP 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444285 6b9g:D (3.0) BS01 GDP 3.6.5.- GO:0003924 ... Q8WXF7 29180453
    444286 6b9h:A (1.5) BS01 peptide ? GO:0030705 ... Q86VS8 29515126
    444287 6b9i:A (1.93) BS01 D0G ? GO:0008289 ... X5EH37 30429218
    444288 6b9i:B (1.93) BS01 D0G ? GO:0008289 ... X5EH37 30429218
    444289 6b9l:A (3.2) BS01 peptide 2.7.10.1 N/A P29317 30110533
    444290 6b9l:A (3.2) BS02 peptide 2.7.10.1 N/A P29317 30110533
    444291 6b9l:A (3.2) BS03 peptide 2.7.10.1 N/A P29317 30110533
    444292 6b9l:B (3.2) BS01 peptide 2.7.10.1 N/A P29317 30110533
    444293 6b9l:C (3.2) BS01 peptide 2.7.10.1 N/A P29317 30110533
    444294 6b9l:D (3.2) BS01 peptide 2.7.10.1 N/A P29317 30110533
    444295 6b9m:A (1.68) BS01 peptide 2.3.2.27 N/A E7EZF3 29395786
    444296 6b9m:B (1.68) BS01 peptide 2.3.2.27 N/A E7EZF3 29395786
    444297 6b9o:A (1.841) BS01 BMA 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444298 6b9o:A (1.841) BS02 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444299 6b9o:A (1.841) BS03 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444300 6b9o:A (1.841) BS04 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444301 6b9o:A (1.841) BS05 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444302 6b9o:A (1.841) BS06 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444303 6b9o:A (1.841) BS07 ZN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444304 6b9o:B (1.841) BS01 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444305 6b9o:B (1.841) BS02 BMA 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444306 6b9o:B (1.841) BS03 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444307 6b9o:B (1.841) BS04 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444308 6b9o:B (1.841) BS05 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444309 6b9o:B (1.841) BS06 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444310 6b9o:B (1.841) BS07 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444311 6b9o:B (1.841) BS08 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444312 6b9o:B (1.841) BS09 ZN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444313 6b9p:A (1.996) BS01 BMA 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444314 6b9p:A (1.996) BS02 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444315 6b9p:A (1.996) BS03 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444316 6b9p:A (1.996) BS04 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444317 6b9p:A (1.996) BS05 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444318 6b9p:A (1.996) BS06 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444319 6b9p:A (1.996) BS07 D0J 3.2.1.24 GO:0000326 ... C0HJB3 29722924 MOAD: Ki=0.001uM
    444320 6b9p:A (1.996) BS08 ZN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444321 6b9p:B (1.996) BS01 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444322 6b9p:B (1.996) BS02 BMA 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444323 6b9p:B (1.996) BS03 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444324 6b9p:B (1.996) BS04 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444325 6b9p:B (1.996) BS05 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444326 6b9p:B (1.996) BS06 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444327 6b9p:B (1.996) BS07 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444328 6b9p:B (1.996) BS08 MAN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444329 6b9p:B (1.996) BS09 D0J 3.2.1.24 GO:0000326 ... C0HJB3 29722924 MOAD: Ki=0.001uM
    444330 6b9p:B (1.996) BS10 ZN 3.2.1.24 GO:0000326 ... C0HJB3 29722924
    444331 6b9r:A (1.802) BS01 FE N/A GO:0003677 ... N/A 29217579
    444332 6b9r:A (1.802) BS02 2HE N/A GO:0003677 ... N/A 29217579
    444333 6b9r:B (1.802) BS01 FE N/A GO:0003677 ... N/A 29217579
    444334 6b9r:B (1.802) BS02 2HE N/A GO:0003677 ... N/A 29217579
    444335 6b9r:B (1.802) BS03 2HE N/A GO:0003677 ... N/A 29217579
    444336 6b9r:C (1.802) BS01 2HE N/A GO:0003677 ... N/A 29217579
    444337 6b9r:C (1.802) BS02 FE N/A GO:0003677 ... N/A 29217579
    444338 6b9r:C (1.802) BS03 2HE N/A GO:0003677 ... N/A 29217579
    444339 6b9r:D (1.802) BS01 2HE N/A GO:0003677 ... N/A 29217579
    444340 6b9r:D (1.802) BS02 FE N/A GO:0003677 ... N/A 29217579
    444341 6b9r:D (1.802) BS03 2HE N/A GO:0003677 ... N/A 29217579
    444342 6b9s:A (2.373) BS01 FE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444343 6b9s:C (2.373) BS01 FE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444344 6b9s:D (2.373) BS01 FE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444345 6b9s:E (2.373) BS01 FE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444346 6b9s:G (2.373) BS01 FE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444347 6b9t:A (2.35) BS01 FE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444348 6b9t:A (2.35) BS02 2HE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444349 6b9t:A (2.35) BS03 2HE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444350 6b9t:B (2.35) BS01 2HE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444351 6b9t:B (2.35) BS02 FE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444352 6b9t:B (2.35) BS03 2HE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444353 6b9t:C (2.35) BS01 FE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444354 6b9t:C (2.35) BS02 2HE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444355 6b9t:C (2.35) BS03 2HE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444356 6b9t:D (2.35) BS01 2HE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444357 6b9t:D (2.35) BS02 FE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444358 6b9t:D (2.35) BS03 2HE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444359 6b9t:E (2.35) BS01 FE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444360 6b9t:E (2.35) BS02 2HE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444361 6b9t:E (2.35) BS03 2HE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444362 6b9t:F (2.35) BS01 2HE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444363 6b9t:F (2.35) BS02 FE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444364 6b9t:F (2.35) BS03 2HE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444365 6b9t:G (2.35) BS01 FE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444366 6b9t:G (2.35) BS02 2HE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444367 6b9t:G (2.35) BS03 2HE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444368 6b9t:H (2.35) BS01 FE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444369 6b9t:H (2.35) BS02 2HE 1.13.11.73 GO:0003677 ... A9A1T2 29217579
    444370 6b9u:A (1.8) BS01 NAI ? GO:0000166 ... Q2YJS1 N/A
    444371 6b9u:B (1.8) BS01 NAI ? GO:0000166 ... Q2YJS1 N/A
    444372 6b9v:A (1.88) BS01 MN ? GO:0046872 ... Q1INB9 29229761
    444373 6b9v:A (1.88) BS02 MN ? GO:0046872 ... Q1INB9 29229761
    444374 6b9v:A (1.88) BS03 PO4 ? GO:0046872 ... Q1INB9 29229761
    444375 6b9v:A (1.88) BS04 ZN ? GO:0046872 ... Q1INB9 29229761
    444376 6b9v:B (1.88) BS01 MN ? GO:0046872 ... Q1INB9 29229761
    444377 6b9v:B (1.88) BS02 MN ? GO:0046872 ... Q1INB9 29229761
    444378 6b9v:B (1.88) BS03 PO4 ? GO:0046872 ... Q1INB9 29229761
    444379 6b9v:B (1.88) BS04 ZN ? GO:0046872 ... Q1INB9 29229761
    444380 6b9y:A (2.14) BS01 peptide ? GO:0002250 ... P01834 29763554
    444381 6b9y:B (2.14) BS01 peptide ? N/A Q6GMX6 29763554
    444382 6ba0:A (2.03) BS01 CA N/A GO:0016799 ... N/A N/A
    444383 6ba0:B (2.03) BS01 CA N/A GO:0016799 ... N/A N/A
    444384 6ba0:C (2.03) BS01 CA N/A GO:0016799 ... N/A N/A
    444385 6ba0:D (2.03) BS01 CA N/A GO:0016799 ... N/A N/A
    444386 6ba1:A (2.9) BS01 CA N/A GO:0016799 ... N/A N/A
    444387 6ba1:B (2.9) BS01 CA N/A GO:0016799 ... N/A N/A
    444388 6ba1:C (2.9) BS01 CA N/A GO:0016799 ... N/A N/A
    444389 6ba1:D (2.9) BS01 CA N/A GO:0016799 ... N/A N/A
    444390 6ba1:E (2.9) BS01 CA N/A GO:0016799 ... N/A N/A
    444391 6ba1:F (2.9) BS01 CA N/A GO:0016799 ... N/A N/A
    444392 6ba1:G (2.9) BS01 CA N/A GO:0016799 ... N/A N/A
    444393 6ba1:H (2.9) BS01 CA N/A GO:0016799 ... N/A N/A
    444394 6ba1:I (2.9) BS01 CA N/A GO:0016799 ... N/A N/A
    444395 6ba1:J (2.9) BS01 CA N/A GO:0016799 ... N/A N/A
    444396 6ba1:K (2.9) BS01 CA N/A GO:0016799 ... N/A N/A
    444397 6ba1:L (2.9) BS01 CA N/A GO:0016799 ... N/A N/A
    444398 6ba1:M (2.9) BS01 CA N/A GO:0016799 ... N/A N/A
    444399 6ba1:N (2.9) BS01 CA N/A GO:0016799 ... N/A N/A
    444400 6ba1:O (2.9) BS01 CA N/A GO:0016799 ... N/A N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).