SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    445601 6bmt:A (2.403) BS01 CA 1.11.2.2 GO:0004601 ... P05164 29524428
    445602 6bmt:A (2.403) BS02 HEM 1.11.2.2 GO:0004601 ... P05164 29524428
    445603 6bmu:A (2.12) BS01 5OD 3.1.3.48 GO:0004725 ... Q06124 29304282 BindingDB: IC50=70.0nM
    445604 6bmu:A (2.12) BS02 DZV 3.1.3.48 GO:0004725 ... Q06124 29304282
    445605 6bmu:B (2.12) BS01 5OD 3.1.3.48 GO:0004725 ... Q06124 29304282 BindingDB: IC50=70.0nM
    445606 6bmu:B (2.12) BS02 DZV 3.1.3.48 GO:0004725 ... Q06124 29304282
    445607 6bmv:A (2.053) BS01 DZS 3.1.3.48 GO:0004725 ... Q06124 29304282
    445608 6bmv:B (2.053) BS01 DZS 3.1.3.48 GO:0004725 ... Q06124 29304282
    445609 6bmw:A (2.1) BS01 5OD 3.1.3.48 GO:0004725 ... Q06124 29304282 BindingDB: IC50=70.0nM
    445610 6bmw:A (2.1) BS02 DZS 3.1.3.48 GO:0004725 ... Q06124 29304282
    445611 6bmw:B (2.1) BS01 5OD 3.1.3.48 GO:0004725 ... Q06124 29304282 BindingDB: IC50=70.0nM
    445612 6bmw:B (2.1) BS02 DZS 3.1.3.48 GO:0004725 ... Q06124 29304282
    445613 6bmx:A (2.424) BS01 DYV 3.1.3.48 GO:0004725 ... Q06124 29304282
    445614 6bmx:B (2.424) BS01 DYV 3.1.3.48 GO:0004725 ... Q06124 29304282
    445615 6bmy:A (2.09) BS01 5OD 3.1.3.48 GO:0004725 ... Q06124 29304282 BindingDB: IC50=70.0nM
    445616 6bmy:A (2.09) BS02 DYV 3.1.3.48 GO:0004725 ... Q06124 29304282
    445617 6bmy:B (2.09) BS01 5OD 3.1.3.48 GO:0004725 ... Q06124 29304282 BindingDB: IC50=70.0nM
    445618 6bmy:B (2.09) BS02 DYV 3.1.3.48 GO:0004725 ... Q06124 29304282
    445619 6bn2:A (1.65) BS01 CA 2.3.1.9 GO:0003985 ... A0A077EEP0 N/A
    445620 6bn5:A (2.22) BS01 DZJ 3.1.3.48 GO:0004725 ... Q06124 29089257
    445621 6bn5:B (2.22) BS01 DZJ 3.1.3.48 GO:0004725 ... Q06124 29089257
    445622 6bn6:A (2.4) BS01 XGH ? GO:0003677 ... P51449 29233651 BindingDB: EC50=12nM
    445623 6bn6:B (2.4) BS01 XGH ? GO:0003677 ... P51449 29233651 BindingDB: EC50=12nM
    445624 6bn7:B (3.501) BS01 ZN ? GO:0005515 ... Q96SW2 29892083
    445625 6bn7:B (3.501) BS02 RN3 ? GO:0005515 ... Q96SW2 29892083
    445626 6bn7:C (3.501) BS01 RN3 ? N/A O60885 29892083
    445627 6bn8:B (3.99004) BS01 ZN ? GO:0005515 ... Q96SW2 29892083
    445628 6bn9:B (4.382) BS01 ZN ? GO:0005515 ... Q96SW2 29892083
    445629 6bnb:B (6.343) BS01 ZN ? GO:0005515 ... Q96SW2 29892083
    445630 6bnc:A (1.5) BS01 ZN ? GO:0016772 ... A0A1E9VP98 29631403
    445631 6bnc:A (1.5) BS02 ZN ? GO:0016772 ... A0A1E9VP98 29631403
    445632 6bnc:B (1.5) BS01 ZN ? GO:0016772 ... A0A1E9VP98 29631403
    445633 6bnc:B (1.5) BS02 ZN ? GO:0016772 ... A0A1E9VP98 29631403
    445634 6bnd:A (1.66) BS01 ZN ? GO:0016772 ... A0A1E9VP98 29631403
    445635 6bnd:A (1.66) BS02 OPE ? GO:0016772 ... A0A1E9VP98 29631403
    445636 6bnd:B (1.66) BS01 ZN ? GO:0016772 ... A0A1E9VP98 29631403
    445637 6bnd:B (1.66) BS02 OPE ? GO:0016772 ... A0A1E9VP98 29631403
    445638 6bnf:A (2.33) BS01 ZN ? GO:0016772 ... A0A1E9VP98 29631403
    445639 6bnh:A (-1.00) BS01 peptide ? N/A O60885 29176719
    445640 6bni:A (1.85) BS01 LYS 6.1.1.6 GO:0000049 ... Q5CR27 N/A
    445641 6bni:A (1.85) BS02 ADN 6.1.1.6 GO:0000049 ... Q5CR27 N/A
    445642 6bni:B (1.85) BS01 LYS 6.1.1.6 GO:0000049 ... Q5CR27 N/A
    445643 6bni:B (1.85) BS02 ADN 6.1.1.6 GO:0000049 ... Q5CR27 N/A
    445644 6bnj:A (1.909) BS01 WPG 2.4.2.8 GO:0000166 ... P00492 29161011 MOAD: Ki=8nM
    BindingDB: Ki=8.0nM
    445645 6bnj:A (1.909) BS02 MG 2.4.2.8 GO:0000166 ... P00492 29161011
    445646 6bnj:B (1.909) BS01 WPG 2.4.2.8 GO:0000166 ... P00492 29161011 MOAD: Ki=8nM
    BindingDB: Ki=8.0nM
    445647 6bnj:B (1.909) BS02 MG 2.4.2.8 GO:0000166 ... P00492 29161011
    445648 6bnj:C (1.909) BS01 WPG 2.4.2.8 GO:0000166 ... P00492 29161011 MOAD: Ki=8nM
    BindingDB: Ki=8.0nM
    445649 6bnj:C (1.909) BS02 MG 2.4.2.8 GO:0000166 ... P00492 29161011
    445650 6bnj:D (1.909) BS01 WPG 2.4.2.8 GO:0000166 ... P00492 29161011 MOAD: Ki=8nM
    BindingDB: Ki=8.0nM
    445651 6bnj:D (1.909) BS02 MG 2.4.2.8 GO:0000166 ... P00492 29161011
    445652 6bnk:A (3.2) BS01 AGH ? N/A P11609 29576533
    445653 6bnk:C (3.2) BS01 AGH N/A N/A N/A 29576533
    445654 6bnk:E (3.2) BS01 AGH ? N/A P11609 29576533
    445655 6bnk:G (3.2) BS01 AGH N/A N/A N/A 29576533
    445656 6bnl:A (2.6) BS01 QWV ? N/A P11609 29576533
    445657 6bnl:C (2.6) BS01 QWV N/A N/A N/A 29576533
    445658 6bnl:E (2.6) BS01 QWV ? N/A P11609 29576533
    445659 6bnl:G (2.6) BS01 QWV N/A N/A N/A 29576533
    445660 6bnn:A (1.55) BS01 GSH 4.4.1.5 GO:0004462 ... B6TPH0 30993890
    445661 6bnn:A (1.55) BS02 CO 4.4.1.5 GO:0004462 ... B6TPH0 30993890
    445662 6bno:A (5.5) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445663 6bno:A (5.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445664 6bno:B (5.5) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445665 6bno:B (5.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445666 6bno:C (5.5) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445667 6bno:D (5.5) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445668 6bno:E (5.5) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445669 6bno:E (5.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445670 6bno:F (5.5) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445671 6bno:F (5.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445672 6bno:G (5.5) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445673 6bno:G (5.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445674 6bno:H (5.5) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445675 6bno:H (5.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445676 6bnp:A (4.6) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445677 6bnp:B (4.6) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445678 6bnp:B (4.6) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445679 6bnp:C (4.6) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445680 6bnp:C (4.6) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445681 6bnp:D (4.6) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445682 6bnp:E (4.6) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445683 6bnp:E (4.6) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445684 6bnp:F (4.6) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445685 6bnp:F (4.6) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445686 6bnp:G (4.6) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445687 6bnp:G (4.6) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445688 6bnp:H (4.6) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445689 6bnp:H (4.6) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445690 6bnq:A (5.5) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445691 6bnq:A (5.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445692 6bnq:B (5.5) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445693 6bnq:B (5.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445694 6bnq:C (5.5) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445695 6bnq:C (5.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445696 6bnq:D (5.5) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445697 6bnq:D (5.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445698 6bnq:E (5.5) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445699 6bnq:E (5.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445700 6bnq:F (5.5) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445701 6bnq:F (5.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445702 6bnq:G (5.5) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445703 6bnq:G (5.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445704 6bnq:H (5.5) BS01 MG 3.6.4.- GO:0000287 ... P68135 29199952
    445705 6bnq:H (5.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 29199952
    445706 6bnr:A (1.95) BS01 HEM ? GO:0004601 ... P69905 29655608
    445707 6bnr:A (1.95) BS02 E0J ? GO:0004601 ... P69905 29655608
    445708 6bnr:A (1.95) BS03 E0J ? GO:0004601 ... P69905 29655608
    445709 6bnr:B (1.95) BS01 HEM ? GO:0004601 ... P68871 29655608
    445710 6bnr:C (1.95) BS01 E0J ? GO:0004601 ... P69905 29655608
    445711 6bnr:C (1.95) BS02 HEM ? GO:0004601 ... P69905 29655608
    445712 6bnr:C (1.95) BS03 E0J ? GO:0004601 ... P69905 29655608
    445713 6bnr:D (1.95) BS01 HEM ? GO:0004601 ... P68871 29655608
    445714 6bns:A (2.56) BS01 XGH 2.3.1.48 GO:0003677 ... O75469
    Q15788
    29233651
    445715 6bns:B (2.56) BS01 XGH 2.3.1.48 GO:0003677 ... O75469
    Q15788
    29233651
    445716 6bnt:A (3.2) BS01 peptide ? GO:0006886 ... Q96CW1 30931927
    445717 6bnx:A (1.8) BS01 CO 4.4.1.5 GO:0004462 ... B6TPH0 30993890
    445718 6bny:A (3.341) BS01 E0M 2.7.11.1 GO:0002218 ... Q9UHD2 30082428 BindingDB: IC50=180nM
    445719 6bnz:A (1.45) BS01 CO 4.4.1.5 GO:0004462 ... B6TPH0 30993890
    445720 6bnz:A (1.45) BS02 GSH 4.4.1.5 GO:0004462 ... B6TPH0 30993890
    445721 6bo1:A (1.24) BS01 E3D 3.2.1.17 GO:0003796 ... P00698 29713703
    445722 6bo2:A (1.48) BS01 E3D 3.2.1.17 GO:0003796 ... P00698 29713703
    445723 6bo6:A (2.801) BS01 E0V 3.2.1.31 GO:0004553 ... C4Z6Z2 30062115
    445724 6bo7:A (2.856) BS01 MG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445725 6bo7:A (2.856) BS02 YPG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445726 6bo7:B (2.856) BS01 MG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445727 6bo7:B (2.856) BS02 YPG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445728 6bo7:C (2.856) BS01 MG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445729 6bo7:C (2.856) BS02 YPG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445730 6bo7:D (2.856) BS01 MG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445731 6bo7:D (2.856) BS02 YPG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445732 6bo7:E (2.856) BS01 MG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445733 6bo7:E (2.856) BS02 MG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445734 6bo7:E (2.856) BS03 YPG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445735 6bo7:F (2.856) BS01 MG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445736 6bo7:F (2.856) BS02 YPG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445737 6bo7:G (2.856) BS01 MG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445738 6bo7:G (2.856) BS02 YPG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445739 6bo7:H (2.856) BS01 MG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445740 6bo7:H (2.856) BS02 YPG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445741 6bo7:I (2.856) BS01 MG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445742 6bo7:I (2.856) BS02 YPG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445743 6bo7:J (2.856) BS01 MG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445744 6bo7:J (2.856) BS02 YPG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445745 6bo7:K (2.856) BS01 MG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445746 6bo7:K (2.856) BS02 MG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445747 6bo7:K (2.856) BS03 YPG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445748 6bo7:L (2.856) BS01 MG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445749 6bo7:L (2.856) BS02 MG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445750 6bo7:L (2.856) BS03 YPG 2.4.2.8 GO:0000166 ... A5K7E9 29161011
    445751 6bod:A (3.197) BS01 E0P 2.7.11.1 GO:0002218 ... Q9UHD2 30082428 BindingDB: IC50=123000nM
    445752 6boe:A (3.598) BS01 E0S 2.7.11.1 GO:0002218 ... Q9UHD2 30082428 BindingDB: IC50=180nM
    445753 6bof:A (1.401) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 30952657
    445754 6bof:B (1.401) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 30952657
    445755 6boh:AA (3.4) BS01 rna ? GO:0003735 ... Q72I22 29731232
    445756 6boh:AA (3.4) BS02 rna ? GO:0003735 ... Q72I22 29731232
    445757 6boh:AB (3.4) BS01 rna ? GO:0003735 ... P62658 29731232
    445758 6boh:AB (3.4) BS02 MG ? GO:0003735 ... P62658 29731232
    445759 6boh:AC (3.4) BS01 rna ? GO:0003723 ... Q72I15 29731232
    445760 6boh:AC (3.4) BS02 ZN ? GO:0003723 ... Q72I15 29731232
    445761 6boh:AD (3.4) BS01 rna ? GO:0000049 ... P61941 29731232
    445762 6boh:BA (3.4) BS01 rna ? GO:0003735 ... Q72JR0 29731232
    445763 6boh:BB (3.4) BS01 rna ? GO:0003735 ... P62659 29731232
    445764 6boh:BC (3.4) BS01 rna ? GO:0003723 ... Q72IA7 29731232
    445765 6boh:BC (3.4) BS02 rna ? GO:0003723 ... Q72IA7 29731232
    445766 6boh:BD (3.4) BS01 rna ? GO:0000049 ... P62655 29731232
    445767 6boh:CA (3.4) BS01 rna ? GO:0003735 ... P62652 29731232
    445768 6boh:CA (3.4) BS02 ZN ? GO:0003735 ... P62652 29731232
    445769 6boh:CB (3.4) BS01 rna ? GO:0000028 ... P62660 29731232
    445770 6boh:CC (3.4) BS01 rna ? GO:0003735 ... Q72HR3 29731232
    445771 6boh:CC (3.4) BS02 rna ? GO:0003735 ... Q72HR3 29731232
    445772 6boh:CC (3.4) BS03 rna ? GO:0003735 ... Q72HR3 29731232
    445773 6boh:CD (3.4) BS01 rna ? GO:0003735 ... P62656 29731232
    445774 6boh:DA (3.4) BS01 rna ? GO:0003735 ... Q72GW3 29731232
    445775 6boh:DB (3.4) BS01 rna ? GO:0003723 ... P62661 29731232
    445776 6boh:DC (3.4) BS01 rna ? GO:0003735 ... Q72G84 29731232
    445777 6boh:DD (3.4) BS01 rna ? GO:0003735 ... P62657 29731232
    445778 6boh:DD (3.4) BS02 rna ? GO:0003735 ... P62657 29731232
    445779 6boh:DD (3.4) BS03 MG ? GO:0003735 ... P62657 29731232
    445780 6boh:E (3.4) BS01 rna ? GO:0002181 ... Q72I07 29731232
    445781 6boh:E (3.4) BS02 rna ? GO:0002181 ... Q72I07 29731232
    445782 6boh:E (3.4) BS03 MG ? GO:0002181 ... Q72I07 29731232
    445783 6boh:E (3.4) BS04 MG ? GO:0002181 ... Q72I07 29731232
    445784 6boh:EA (3.4) BS01 rna ? GO:0003735 ... P80340 29731232
    445785 6boh:EC (3.4) BS01 rna ? GO:0003735 ... Q72I12 29731232
    445786 6boh:ED (3.4) BS01 rna ? GO:0003735 ... P62238 29731232
    445787 6boh:F (3.4) BS01 rna ? GO:0003735 ... Q72I04 29731232
    445788 6boh:FA (3.4) BS01 rna ? GO:0003735 ... Q72L77 29731232
    445789 6boh:FC (3.4) BS01 rna ? GO:0003735 ... Q72I22 29731232
    445790 6boh:FC (3.4) BS02 rna ? GO:0003735 ... Q72I22 29731232
    445791 6boh:FD (3.4) BS01 rna ? GO:0003735 ... P62658 29731232
    445792 6boh:G (3.4) BS01 rna ? GO:0003735 ... Q72I05 29731232
    445793 6boh:GA (3.4) BS01 rna ? GO:0003735 ... Q72I28 29731232
    445794 6boh:GC (3.4) BS01 rna ? GO:0003735 ... Q72JR0 29731232
    445795 6boh:GC (3.4) BS02 MG ? GO:0003735 ... Q72JR0 29731232
    445796 6boh:GD (3.4) BS01 rna ? GO:0003735 ... P62659 29731232
    445797 6boh:H (3.4) BS01 rna ? GO:0000049 ... Q72I16 29731232
    445798 6boh:H (3.4) BS02 rna ? GO:0000049 ... Q72I16 29731232
    445799 6boh:H (3.4) BS03 rna ? GO:0000049 ... Q72I16 29731232
    445800 6boh:HC (3.4) BS01 rna ? GO:0003735 ... P62652 29731232

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).