SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    446201 6bqk:B (1.97) BS02 ZN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P27958 29456803
    446202 6bql:A (2.0) BS01 BI9 2.7.11.17 GO:0004672 ... Q96RR4 N/A
    446203 6bqo:A (2.8) BS01 F ? GO:0005886 ... Q7VYU0 29526432
    446204 6bqo:B (2.8) BS01 F ? GO:0005886 ... Q7VYU0 29526432
    446205 6bqp:A (1.95) BS01 6T2 2.7.11.17 GO:0004672 ... Q96RR4 N/A
    446206 6bqq:A (1.8) BS01 R78 2.7.11.17 GO:0004672 ... Q96RR4 N/A BindingDB: Kd=23nM
    446207 6bqr:A (3.2) BS01 Y01 ? GO:0002250 ... Q8TD43 29217581
    446208 6bqr:A (3.2) BS02 Y01 ? GO:0002250 ... Q8TD43 29217581
    446209 6bqr:A (3.2) BS03 Y01 ? GO:0002250 ... Q8TD43 29217581
    446210 6bqr:A (3.2) BS04 Y01 ? GO:0002250 ... Q8TD43 29217581
    446211 6bqr:B (3.2) BS01 Y01 ? GO:0002250 ... Q8TD43 29217581
    446212 6bqr:B (3.2) BS02 Y01 ? GO:0002250 ... Q8TD43 29217581
    446213 6bqr:B (3.2) BS03 Y01 ? GO:0002250 ... Q8TD43 29217581
    446214 6bqr:B (3.2) BS04 Y01 ? GO:0002250 ... Q8TD43 29217581
    446215 6bqr:C (3.2) BS01 Y01 ? GO:0002250 ... Q8TD43 29217581
    446216 6bqr:C (3.2) BS02 Y01 ? GO:0002250 ... Q8TD43 29217581
    446217 6bqr:C (3.2) BS03 Y01 ? GO:0002250 ... Q8TD43 29217581
    446218 6bqr:C (3.2) BS04 Y01 ? GO:0002250 ... Q8TD43 29217581
    446219 6bqr:D (3.2) BS01 Y01 ? GO:0002250 ... Q8TD43 29217581
    446220 6bqr:D (3.2) BS02 Y01 ? GO:0002250 ... Q8TD43 29217581
    446221 6bqr:D (3.2) BS03 Y01 ? GO:0002250 ... Q8TD43 29217581
    446222 6bqr:D (3.2) BS04 Y01 ? GO:0002250 ... Q8TD43 29217581
    446223 6bqt:A (2.8) BS01 peptide ? GO:0005515 ... P27348 30696821
    446224 6bqt:B (2.8) BS01 peptide ? GO:0005515 ... P27348 30696821
    446225 6bqt:D (2.8) BS01 peptide ? GO:0005515 ... P27348 30696821
    446226 6bqt:E (2.8) BS01 peptide ? GO:0005515 ... P27348 30696821
    446227 6bqt:G (2.8) BS01 peptide ? GO:0005515 ... P27348 30696821
    446228 6bqt:H (2.8) BS01 peptide ? GO:0005515 ... P27348 30696821
    446229 6bqt:J (2.8) BS01 peptide ? GO:0005515 ... P27348 30696821
    446230 6bqt:K (2.8) BS01 peptide ? GO:0005515 ... P27348 30696821
    446231 6bqu:A (2.5) BS01 dna ? GO:0003700 ... P04150 N/A
    446232 6bqu:A (2.5) BS02 ZN ? GO:0003700 ... P04150 N/A
    446233 6bqu:A (2.5) BS03 ZN ? GO:0003700 ... P04150 N/A
    446234 6bqu:B (2.5) BS01 dna ? GO:0003700 ... P04150 N/A
    446235 6bqu:B (2.5) BS02 dna ? GO:0003700 ... P04150 N/A
    446236 6bqu:B (2.5) BS03 ZN ? GO:0003700 ... P04150 N/A
    446237 6bqu:B (2.5) BS04 ZN ? GO:0003700 ... P04150 N/A
    446238 6bqv:A (3.1) BS01 CA ? GO:0002250 ... Q8TD43 29217581
    446239 6bqv:A (3.1) BS02 Y01 ? GO:0002250 ... Q8TD43 29217581
    446240 6bqv:A (3.1) BS03 Y01 ? GO:0002250 ... Q8TD43 29217581
    446241 6bqv:A (3.1) BS04 Y01 ? GO:0002250 ... Q8TD43 29217581
    446242 6bqv:A (3.1) BS05 Y01 ? GO:0002250 ... Q8TD43 29217581
    446243 6bqv:B (3.1) BS01 CA ? GO:0002250 ... Q8TD43 29217581
    446244 6bqv:B (3.1) BS02 Y01 ? GO:0002250 ... Q8TD43 29217581
    446245 6bqv:B (3.1) BS03 Y01 ? GO:0002250 ... Q8TD43 29217581
    446246 6bqv:B (3.1) BS04 Y01 ? GO:0002250 ... Q8TD43 29217581
    446247 6bqv:B (3.1) BS05 Y01 ? GO:0002250 ... Q8TD43 29217581
    446248 6bqv:C (3.1) BS01 Y01 ? GO:0002250 ... Q8TD43 29217581
    446249 6bqv:C (3.1) BS02 CA ? GO:0002250 ... Q8TD43 29217581
    446250 6bqv:C (3.1) BS03 Y01 ? GO:0002250 ... Q8TD43 29217581
    446251 6bqv:C (3.1) BS04 Y01 ? GO:0002250 ... Q8TD43 29217581
    446252 6bqv:C (3.1) BS05 Y01 ? GO:0002250 ... Q8TD43 29217581
    446253 6bqv:D (3.1) BS01 Y01 ? GO:0002250 ... Q8TD43 29217581
    446254 6bqv:D (3.1) BS02 CA ? GO:0002250 ... Q8TD43 29217581
    446255 6bqv:D (3.1) BS03 Y01 ? GO:0002250 ... Q8TD43 29217581
    446256 6bqv:D (3.1) BS04 Y01 ? GO:0002250 ... Q8TD43 29217581
    446257 6bqv:D (3.1) BS05 Y01 ? GO:0002250 ... Q8TD43 29217581
    446258 6bqw:A (4.2) BS01 ANP ? N/A O52947 29440491
    446259 6bqw:B (4.2) BS01 ANP ? N/A O52947 29440491
    446260 6bqw:C (4.2) BS01 ANP ? N/A O52947 29440491
    446261 6bqw:D (4.2) BS01 ANP ? N/A O52947 29440491
    446262 6bqw:E (4.2) BS01 ANP ? N/A O52947 29440491
    446263 6bqw:F (4.2) BS01 ANP ? N/A O52947 29440491
    446264 6bqw:G (4.2) BS01 ANP ? N/A O52947 29440491
    446265 6bqw:H (4.2) BS01 ANP ? N/A O52947 29440491
    446266 6bqw:I (4.2) BS01 ANP ? N/A O52947 29440491
    446267 6bqx:A (1.992) BS01 9AG ? GO:0003756 ... P0AEG4 29237285
    446268 6bqz:A (2.3) BS01 TYR 6.1.1.1 GO:0000166 ... B0VML7 N/A
    446269 6bqz:A (2.3) BS02 MG 6.1.1.1 GO:0000166 ... B0VML7 N/A
    446270 6bqz:B (2.3) BS01 TYR 6.1.1.1 GO:0000166 ... B0VML7 N/A
    446271 6bqz:B (2.3) BS02 MG 6.1.1.1 GO:0000166 ... B0VML7 N/A
    446272 6br1:A (2.304) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    446273 6br1:A (2.304) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    446274 6br1:B (2.304) BS01 GDP ? GO:0000226 ... P02554 29406710
    446275 6br1:B (2.304) BS02 E3Y ? GO:0000226 ... P02554 29406710
    446276 6br1:C (2.304) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    446277 6br1:C (2.304) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    446278 6br1:D (2.304) BS01 GDP ? GO:0000226 ... P02554 29406710
    446279 6br1:D (2.304) BS02 E3Y ? GO:0000226 ... P02554 29406710
    446280 6br1:F (2.304) BS01 ACP N/A GO:0036211 ... N/A 29406710
    446281 6br2:A (3.18) BS01 E3S ? GO:0003677 ... P51449 29510038
    446282 6br2:B (3.18) BS01 E3S ? GO:0003677 ... P51449 29510038
    446283 6br3:A (3.0) BS01 E3V ? GO:0003677 ... P51449 29510038
    446284 6br3:B (3.0) BS01 E3V ? GO:0003677 ... P51449 29510038
    446285 6br4:A (1.99) BS01 60L ? GO:0003756 ... P0AEG4 29237285
    446286 6br4:B (1.99) BS01 CU ? GO:0003756 ... P0AEG4 29237285
    446287 6br5:A (2.03791) BS01 CA 3.2.1.18 GO:0004308 ... E0UY46 29453852
    446288 6br5:A (2.03791) BS02 GYG 3.2.1.18 GO:0004308 ... E0UY46 29453852 MOAD: ic50=19.9nM
    446289 6br6:A (2.03984) BS01 CA 3.2.1.18 GO:0004308 ... E0UY46 29453852
    446290 6br6:A (2.03984) BS02 E3M 3.2.1.18 GO:0004308 ... E0UY46 29453852 MOAD: Kd=3245nM
    446291 6br7:A (1.86) BS01 BEF ? GO:0000160 ... Q2VSW6 29438671
    446292 6br7:A (1.86) BS02 MG ? GO:0000160 ... Q2VSW6 29438671
    446293 6br7:B (1.86) BS01 BEF ? GO:0000160 ... Q2VSW6 29438671
    446294 6br7:B (1.86) BS02 MG ? GO:0000160 ... Q2VSW6 29438671
    446295 6br8:A (2.3) BS01 6OU ? N/A Q9J563 29915071
    446296 6br8:A (2.3) BS02 6OU ? N/A Q9J563 29915071
    446297 6br8:A (2.3) BS03 6OU ? N/A Q9J563 29915071
    446298 6br8:A (2.3) BS04 6OU ? N/A Q9J563 29915071
    446299 6br8:B (2.3) BS01 6OU ? N/A Q9J563 29915071
    446300 6br8:B (2.3) BS02 6OU ? N/A Q9J563 29915071
    446301 6br8:B (2.3) BS03 6OU ? N/A Q9J563 29915071
    446302 6br8:B (2.3) BS04 6OU ? N/A Q9J563 29915071
    446303 6br9:A (2.2) BS01 6OU ? N/A Q9J563 29915071
    446304 6br9:A (2.2) BS02 6OU ? N/A Q9J563 29915071
    446305 6br9:A (2.2) BS03 6OU ? N/A Q9J563 29915071
    446306 6br9:A (2.2) BS04 6OU ? N/A Q9J563 29915071
    446307 6bra:A (1.111) BS01 peptide ? GO:0004190 ... Q5RZ08 29968678
    446308 6bra:B (1.111) BS01 peptide ? GO:0004190 ... Q5RZ08 29968678
    446309 6brc:A (2.2) BS01 E5J 2.7.11.17 GO:0004672 ... Q96RR4 N/A
    446310 6brc:B (2.2) BS01 E5J 2.7.11.17 GO:0004672 ... Q96RR4 N/A
    446311 6brd:A (3.32) BS01 FAD 1.14.13.211 GO:0000166 ... F2R776 29398560
    446312 6brd:A (3.32) BS02 RFP 1.14.13.211 GO:0000166 ... F2R776 29398560
    446313 6brd:B (3.32) BS01 FAD 1.14.13.211 GO:0000166 ... F2R776 29398560
    446314 6brd:B (3.32) BS02 RFP 1.14.13.211 GO:0000166 ... F2R776 29398560
    446315 6brd:C (3.32) BS01 FAD 1.14.13.211 GO:0000166 ... F2R776 29398560
    446316 6brd:C (3.32) BS02 RFP 1.14.13.211 GO:0000166 ... F2R776 29398560
    446317 6brf:A (2.5) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    446318 6brf:A (2.5) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    446319 6brf:B (2.5) BS01 GDP ? GO:0000226 ... P02554 29406710
    446320 6brf:B (2.5) BS02 E44 ? GO:0000226 ... P02554 29406710
    446321 6brf:C (2.5) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    446322 6brf:C (2.5) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    446323 6brf:D (2.5) BS01 GDP ? GO:0000226 ... P02554 29406710
    446324 6brf:D (2.5) BS02 E44 ? GO:0000226 ... P02554 29406710
    446325 6brf:F (2.5) BS01 ACP N/A GO:0036211 ... N/A 29406710
    446326 6brg:A (3.5) BS01 MG 3.1.5.- GO:0000724 ... Q60710 29379009
    446327 6brg:B (3.5) BS01 MG 3.1.5.- GO:0000724 ... Q60710 29379009
    446328 6brg:C (3.5) BS01 MG 3.1.5.- GO:0000724 ... Q60710 29379009
    446329 6brg:D (3.5) BS01 MG 3.1.5.- GO:0000724 ... Q60710 29379009
    446330 6brh:A (3.4) BS01 MG 3.1.5.- GO:0000724 ... Q60710 29379009
    446331 6brh:A (3.4) BS02 DGT 3.1.5.- GO:0000724 ... Q60710 29379009
    446332 6brh:A (3.4) BS03 DGT 3.1.5.- GO:0000724 ... Q60710 29379009
    446333 6brh:B (3.4) BS01 DGT 3.1.5.- GO:0000724 ... Q60710 29379009
    446334 6brh:B (3.4) BS02 DGT 3.1.5.- GO:0000724 ... Q60710 29379009
    446335 6brh:B (3.4) BS03 MG 3.1.5.- GO:0000724 ... Q60710 29379009
    446336 6brj:A (2.231) BS01 VX6 2.7.10.1 GO:0004672 ... Q08345 30612951 BindingDB: Kd=28nM
    446337 6brk:A (3.5) BS01 DGT 3.1.5.- GO:0000724 ... Q60710 29379009
    446338 6brk:A (3.5) BS02 DGT 3.1.5.- GO:0000724 ... Q60710 29379009
    446339 6brk:A (3.5) BS03 DGT 3.1.5.- GO:0000724 ... Q60710 29379009
    446340 6brl:A (2.0) BS01 GLU 6.1.1.17 GO:0000049 ... A0A1T3HI54 35924598
    446341 6brm:A (2.55) BS01 ZN ? GO:0016787 ... A0A0N7FW12 29752272
    446342 6brm:A (2.55) BS02 ZN ? GO:0016787 ... A0A0N7FW12 29752272
    446343 6brm:B (2.55) BS01 ZN ? GO:0016787 ... A0A0N7FW12 29752272
    446344 6brm:B (2.55) BS02 ZN ? GO:0016787 ... A0A0N7FW12 29752272
    446345 6brm:C (2.55) BS01 ZN ? GO:0016787 ... A0A0N7FW12 29752272
    446346 6brm:C (2.55) BS02 ZN ? GO:0016787 ... A0A0N7FW12 29752272
    446347 6brm:D (2.55) BS01 ZN ? GO:0016787 ... A0A0N7FW12 29752272
    446348 6brm:D (2.55) BS02 ZN ? GO:0016787 ... A0A0N7FW12 29752272
    446349 6brm:E (2.55) BS01 ZN ? GO:0016787 ... A0A0N7FW12 29752272
    446350 6brm:E (2.55) BS02 ZN ? GO:0016787 ... A0A0N7FW12 29752272
    446351 6brm:F (2.55) BS01 ZN ? GO:0016787 ... A0A0N7FW12 29752272
    446352 6brm:F (2.55) BS02 ZN ? GO:0016787 ... A0A0N7FW12 29752272
    446353 6brm:G (2.55) BS01 ZN ? GO:0016787 ... A0A0N7FW12 29752272
    446354 6brm:G (2.55) BS02 ZN ? GO:0016787 ... A0A0N7FW12 29752272
    446355 6brm:H (2.55) BS01 ZN ? GO:0016787 ... A0A0N7FW12 29752272
    446356 6brm:H (2.55) BS02 ZN ? GO:0016787 ... A0A0N7FW12 29752272
    446357 6brr:A (2.97) BS01 dna 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 29414941
    446358 6brr:A (2.97) BS02 dna 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 29414941
    446359 6brr:A (2.97) BS03 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 29414941 BindingDB: IC50=>50000nM
    446360 6brr:D (2.97) BS01 dna 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 29414941
    446361 6brr:D (2.97) BS02 dna 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 29414941
    446362 6brr:D (2.97) BS03 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 29414941 BindingDB: IC50=>50000nM
    446363 6brs:A (2.3) BS01 peptide ? GO:0004222 ... Q6D8U3 30071011
    446364 6brs:A (2.3) BS02 peptide ? GO:0004222 ... Q6D8U3 30071011
    446365 6brt:A (2.393) BS01 H3M ? N/A A0A0D9Z3K8 30464344
    446366 6bru:B (1.8) BS01 E5M 2.7.11.1 GO:0000785 ... Q99986 N/A
    446367 6bru:D (1.8) BS01 E5M 2.7.11.1 GO:0000785 ... Q99986 N/A
    446368 6brw:A (2.031) BS01 5BS 2.7.10.2 GO:0004672 ... O60674 N/A
    446369 6brx:A (2.8) BS01 dna 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446370 6brx:A (2.8) BS02 dna 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446371 6brx:A (2.8) BS03 dna 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446372 6brx:A (2.8) BS04 MG 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446373 6brx:A (2.8) BS05 MG 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446374 6brx:A (2.8) BS06 MG 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446375 6brx:A (2.8) BS07 0KX 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446376 6brx:B (2.8) BS01 dna 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446377 6brx:B (2.8) BS02 dna 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446378 6brx:B (2.8) BS03 dna 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446379 6brx:B (2.8) BS04 MG 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446380 6brx:B (2.8) BS05 0KX 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446381 6brx:B (2.8) BS06 MG 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446382 6bry:A (2.7) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    446383 6bry:A (2.7) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    446384 6bry:B (2.7) BS01 GDP ? GO:0000226 ... P02554 29406710
    446385 6bry:B (2.7) BS02 GK9 ? GO:0000226 ... P02554 29406710
    446386 6bry:C (2.7) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    446387 6bry:C (2.7) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    446388 6bry:D (2.7) BS01 GDP ? GO:0000226 ... P02554 29406710
    446389 6bry:D (2.7) BS02 GK9 ? GO:0000226 ... P02554 29406710
    446390 6bry:F (2.7) BS01 ACP N/A GO:0036211 ... N/A 29406710
    446391 6bs0:A (1.541) BS01 E4V 2.7.10.2 GO:0004672 ... O60674 N/A
    446392 6bs1:A (3.15) BS01 dna 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446393 6bs1:A (3.15) BS02 dna 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446394 6bs1:A (3.15) BS03 dna 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446395 6bs1:A (3.15) BS04 MG 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446396 6bs1:A (3.15) BS05 MG 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446397 6bs1:A (3.15) BS06 MG 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446398 6bs1:A (3.15) BS07 DZ4 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446399 6bs1:B (3.15) BS01 dna 2.7.7.7 GO:0003684 ... Q9UBT6 29715472
    446400 6bs1:B (3.15) BS02 dna 2.7.7.7 GO:0003684 ... Q9UBT6 29715472

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).