SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    446801 6buq:B (1.88) BS05 PDO 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446802 6buq:C (1.88) BS01 BR8 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446803 6buq:C (1.88) BS02 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446804 6buq:C (1.88) BS03 PDO 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446805 6buq:C (1.88) BS04 PDO 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446806 6buq:C (1.88) BS05 PDO 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446807 6buq:D (1.88) BS01 PDO 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446808 6buq:D (1.88) BS02 BR8 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446809 6buq:D (1.88) BS03 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446810 6buq:D (1.88) BS04 PDO 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446811 6bur:A (2.18) BS01 BR8 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446812 6bur:A (2.18) BS02 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446813 6bur:B (2.18) BS01 BR8 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446814 6bur:B (2.18) BS02 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446815 6bur:C (2.18) BS01 BR8 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446816 6bur:C (2.18) BS02 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446817 6bur:D (2.18) BS01 BR8 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446818 6bur:D (2.18) BS02 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    446819 6buu:A (2.4) BS01 peptide 2.7.11.1 GO:0004672 ... P31749 30078705
    446820 6buu:B (2.4) BS01 peptide 2.7.11.1 GO:0004672 ... P31749 30078705
    446821 6buv:B (1.86) BS01 E9A 2.7.7.18 GO:0000309 ... P9WJJ5 30969758
    446822 6buw:QB (3.5) BS01 rna ? GO:0003735 ... P80371 30476222
    446823 6buw:QC (3.5) BS01 rna ? GO:0003676 ... P80372 30476222
    446824 6buw:QC (3.5) BS02 MG ? GO:0003676 ... P80372 30476222
    446825 6buw:QD (3.5) BS01 rna ? GO:0003723 ... P80373 30476222
    446826 6buw:QD (3.5) BS02 SF4 ? GO:0003723 ... P80373 30476222
    446827 6buw:QE (3.5) BS01 rna ? GO:0003723 ... Q5SHQ5 30476222
    446828 6buw:QF (3.5) BS01 rna ? GO:0003735 ... Q5SLP8 30476222
    446829 6buw:QG (3.5) BS01 rna ? GO:0000049 ... P17291 30476222
    446830 6buw:QH (3.5) BS01 rna ? GO:0003735 ... P0DOY9 30476222
    446831 6buw:QI (3.5) BS01 rna ? GO:0000049 ... P80374 30476222
    446832 6buw:QJ (3.5) BS01 rna ? GO:0000049 ... Q5SHN7 30476222
    446833 6buw:QJ (3.5) BS02 rna ? GO:0000049 ... Q5SHN7 30476222
    446834 6buw:QJ (3.5) BS03 MG ? GO:0000049 ... Q5SHN7 30476222
    446835 6buw:QK (3.5) BS01 rna ? GO:0003735 ... P80376 30476222
    446836 6buw:QL (3.5) BS01 rna ? GO:0000049 ... Q5SHN3 30476222
    446837 6buw:QM (3.5) BS01 rna ? GO:0000049 ... P80377 30476222
    446838 6buw:QM (3.5) BS02 rna ? GO:0000049 ... P80377 30476222
    446839 6buw:QM (3.5) BS03 MG ? GO:0000049 ... P80377 30476222
    446840 6buw:QN (3.5) BS01 rna ? GO:0003735 ... P0DOY6 30476222
    446841 6buw:QN (3.5) BS02 ZN ? GO:0003735 ... P0DOY6 30476222
    446842 6buw:QO (3.5) BS01 rna ? GO:0003735 ... Q5SJ76 30476222
    446843 6buw:QO (3.5) BS02 rna ? GO:0003735 ... Q5SJ76 30476222
    446844 6buw:QP (3.5) BS01 rna ? GO:0003735 ... Q5SJH3 30476222
    446845 6buw:QQ (3.5) BS01 rna ? GO:0003735 ... P0DOY7 30476222
    446846 6buw:QR (3.5) BS01 rna ? GO:0003735 ... Q5SLQ0 30476222
    446847 6buw:QS (3.5) BS01 rna ? GO:0000028 ... Q5SHP2 30476222
    446848 6buw:QT (3.5) BS01 rna ? GO:0003723 ... P80380 30476222
    446849 6buw:R0 (3.5) BS01 rna ? GO:0003735 ... P60493 30476222
    446850 6buw:R0 (3.5) BS02 rna ? GO:0003735 ... P60493 30476222
    446851 6buw:R0 (3.5) BS03 rna ? GO:0003735 ... P60493 30476222
    446852 6buw:R1 (3.5) BS01 rna ? GO:0003735 ... P60494 30476222
    446853 6buw:R2 (3.5) BS01 rna ? GO:0003735 ... Q5SHP6 30476222
    446854 6buw:R3 (3.5) BS01 rna ? GO:0003735 ... Q5SHQ6 30476222
    446855 6buw:R3 (3.5) BS02 rna ? GO:0003735 ... Q5SHQ6 30476222
    446856 6buw:R4 (3.5) BS01 rna ? GO:0003735 ... Q5SJE1 30476222
    446857 6buw:R4 (3.5) BS02 ZN ? GO:0003735 ... Q5SJE1 30476222
    446858 6buw:R5 (3.5) BS01 rna ? GO:0003735 ... P80339 30476222
    446859 6buw:R5 (3.5) BS02 ZN ? GO:0003735 ... P80339 30476222
    446860 6buw:R5 (3.5) BS03 MG ? GO:0003735 ... P80339 30476222
    446861 6buw:R6 (3.5) BS01 rna ? GO:0000049 ... P35871 30476222
    446862 6buw:R6 (3.5) BS02 ZN ? GO:0000049 ... P35871 30476222
    446863 6buw:R7 (3.5) BS01 rna ? GO:0003735 ... P80340 30476222
    446864 6buw:R8 (3.5) BS01 rna ? GO:0003735 ... Q5SKU1 30476222
    446865 6buw:R9 (3.5) BS01 rna ? GO:0003735 ... Q5SHR2 30476222
    446866 6buw:R9 (3.5) BS02 ZN ? GO:0003735 ... Q5SHR2 30476222
    446867 6buw:RD (3.5) BS01 rna ? GO:0002181 ... P60405 30476222
    446868 6buw:RE (3.5) BS01 rna ? GO:0003735 ... Q5SHN8 30476222
    446869 6buw:RE (3.5) BS02 MG ? GO:0003735 ... Q5SHN8 30476222
    446870 6buw:RF (3.5) BS01 rna ? GO:0003735 ... Q5SHN9 30476222
    446871 6buw:RF (3.5) BS02 MG ? GO:0003735 ... Q5SHN9 30476222
    446872 6buw:RF (3.5) BS03 MG ? GO:0003735 ... Q5SHN9 30476222
    446873 6buw:RG (3.5) BS01 rna ? GO:0000049 ... Q5SHQ0 30476222
    446874 6buw:RG (3.5) BS02 rna ? GO:0000049 ... Q5SHQ0 30476222
    446875 6buw:RG (3.5) BS03 rna ? GO:0000049 ... Q5SHQ0 30476222
    446876 6buw:RH (3.5) BS01 rna ? GO:0002181 ... P0DOY8 30476222
    446877 6buw:RI (3.5) BS01 rna ? GO:0003735 ... Q5SLQ1 30476222
    446878 6buw:RN (3.5) BS01 rna ? GO:0003729 ... P60488 30476222
    446879 6buw:RO (3.5) BS01 rna ? GO:0003735 ... Q5SHP8 30476222
    446880 6buw:RO (3.5) BS02 rna ? GO:0003735 ... Q5SHP8 30476222
    446881 6buw:RP (3.5) BS01 rna ? GO:0003735 ... Q5SHQ7 30476222
    446882 6buw:RQ (3.5) BS01 rna ? GO:0000049 ... P60489 30476222
    446883 6buw:RQ (3.5) BS02 rna ? GO:0000049 ... P60489 30476222
    446884 6buw:RQ (3.5) BS03 MG ? GO:0000049 ... P60489 30476222
    446885 6buw:RR (3.5) BS01 rna ? GO:0003735 ... Q9Z9H5 30476222
    446886 6buw:RS (3.5) BS01 rna ? GO:0003735 ... Q5SHQ4 30476222
    446887 6buw:RS (3.5) BS02 rna ? GO:0003735 ... Q5SHQ4 30476222
    446888 6buw:RT (3.5) BS01 rna ? GO:0003735 ... P60490 30476222
    446889 6buw:RT (3.5) BS02 rna ? GO:0003735 ... P60490 30476222
    446890 6buw:RU (3.5) BS01 rna ? GO:0000027 ... P60491 30476222
    446891 6buw:RV (3.5) BS01 rna ? GO:0003723 ... P60492 30476222
    446892 6buw:RW (3.5) BS01 rna ? GO:0003735 ... Q5SHP3 30476222
    446893 6buw:RX (3.5) BS01 rna ? GO:0003735 ... Q5SHP0 30476222
    446894 6buw:RY (3.5) BS01 rna ? GO:0003723 ... Q5SHP9 30476222
    446895 6buw:RY (3.5) BS02 ZN ? GO:0003723 ... Q5SHP9 30476222
    446896 6buw:RZ (3.5) BS01 rna ? GO:0003723 ... Q5SHZ1 30476222
    446897 6buw:RZ (3.5) BS02 rna ? GO:0003723 ... Q5SHZ1 30476222
    446898 6buw:XB (3.5) BS01 rna ? GO:0003735 ... P80371 30476222
    446899 6buw:XC (3.5) BS01 rna ? GO:0003676 ... P80372 30476222
    446900 6buw:XD (3.5) BS01 rna ? GO:0003723 ... P80373 30476222
    446901 6buw:XD (3.5) BS02 SF4 ? GO:0003723 ... P80373 30476222
    446902 6buw:XE (3.5) BS01 rna ? GO:0003723 ... Q5SHQ5 30476222
    446903 6buw:XE (3.5) BS02 MG ? GO:0003723 ... Q5SHQ5 30476222
    446904 6buw:XF (3.5) BS01 rna ? GO:0003735 ... Q5SLP8 30476222
    446905 6buw:XG (3.5) BS01 rna ? GO:0000049 ... P17291 30476222
    446906 6buw:XH (3.5) BS01 rna ? GO:0003735 ... P0DOY9 30476222
    446907 6buw:XI (3.5) BS01 rna ? GO:0000049 ... P80374 30476222
    446908 6buw:XJ (3.5) BS01 rna ? GO:0000049 ... Q5SHN7 30476222
    446909 6buw:XK (3.5) BS01 rna ? GO:0003735 ... P80376 30476222
    446910 6buw:XK (3.5) BS02 MG ? GO:0003735 ... P80376 30476222
    446911 6buw:XL (3.5) BS01 rna ? GO:0000049 ... Q5SHN3 30476222
    446912 6buw:XL (3.5) BS02 MG ? GO:0000049 ... Q5SHN3 30476222
    446913 6buw:XM (3.5) BS01 rna ? GO:0000049 ... P80377 30476222
    446914 6buw:XM (3.5) BS02 rna ? GO:0000049 ... P80377 30476222
    446915 6buw:XM (3.5) BS03 MG ? GO:0000049 ... P80377 30476222
    446916 6buw:XM (3.5) BS04 MG ? GO:0000049 ... P80377 30476222
    446917 6buw:XM (3.5) BS05 MG ? GO:0000049 ... P80377 30476222
    446918 6buw:XM (3.5) BS06 MG ? GO:0000049 ... P80377 30476222
    446919 6buw:XN (3.5) BS01 rna ? GO:0003735 ... P0DOY6 30476222
    446920 6buw:XN (3.5) BS02 ZN ? GO:0003735 ... P0DOY6 30476222
    446921 6buw:XO (3.5) BS01 rna ? GO:0003735 ... Q5SJ76 30476222
    446922 6buw:XO (3.5) BS02 rna ? GO:0003735 ... Q5SJ76 30476222
    446923 6buw:XP (3.5) BS01 rna ? GO:0003735 ... Q5SJH3 30476222
    446924 6buw:XQ (3.5) BS01 rna ? GO:0003735 ... P0DOY7 30476222
    446925 6buw:XQ (3.5) BS02 MG ? GO:0003735 ... P0DOY7 30476222
    446926 6buw:XR (3.5) BS01 rna ? GO:0003735 ... Q5SLQ0 30476222
    446927 6buw:XS (3.5) BS01 rna ? GO:0000028 ... Q5SHP2 30476222
    446928 6buw:XT (3.5) BS01 rna ? GO:0003723 ... P80380 30476222
    446929 6buw:Y0 (3.5) BS01 rna ? GO:0003735 ... P60493 30476222
    446930 6buw:Y0 (3.5) BS02 rna ? GO:0003735 ... P60493 30476222
    446931 6buw:Y0 (3.5) BS03 rna ? GO:0003735 ... P60493 30476222
    446932 6buw:Y1 (3.5) BS01 rna ? GO:0003735 ... P60494 30476222
    446933 6buw:Y2 (3.5) BS01 rna ? GO:0003735 ... Q5SHP6 30476222
    446934 6buw:Y3 (3.5) BS01 rna ? GO:0003735 ... Q5SHQ6 30476222
    446935 6buw:Y3 (3.5) BS02 rna ? GO:0003735 ... Q5SHQ6 30476222
    446936 6buw:Y4 (3.5) BS01 rna ? GO:0003735 ... Q5SJE1 30476222
    446937 6buw:Y4 (3.5) BS02 ZN ? GO:0003735 ... Q5SJE1 30476222
    446938 6buw:Y5 (3.5) BS01 rna ? GO:0003735 ... P80339 30476222
    446939 6buw:Y5 (3.5) BS02 ZN ? GO:0003735 ... P80339 30476222
    446940 6buw:Y6 (3.5) BS01 rna ? GO:0000049 ... P35871 30476222
    446941 6buw:Y7 (3.5) BS01 rna ? GO:0003735 ... P80340 30476222
    446942 6buw:Y8 (3.5) BS01 rna ? GO:0003735 ... Q5SKU1 30476222
    446943 6buw:Y9 (3.5) BS01 rna ? GO:0003735 ... Q5SHR2 30476222
    446944 6buw:Y9 (3.5) BS02 ZN ? GO:0003735 ... Q5SHR2 30476222
    446945 6buw:YD (3.5) BS01 rna ? GO:0002181 ... P60405 30476222
    446946 6buw:YD (3.5) BS02 MG ? GO:0002181 ... P60405 30476222
    446947 6buw:YD (3.5) BS03 MG ? GO:0002181 ... P60405 30476222
    446948 6buw:YE (3.5) BS01 rna ? GO:0003735 ... Q5SHN8 30476222
    446949 6buw:YE (3.5) BS02 MG ? GO:0003735 ... Q5SHN8 30476222
    446950 6buw:YF (3.5) BS01 rna ? GO:0003735 ... Q5SHN9 30476222
    446951 6buw:YG (3.5) BS01 rna ? GO:0000049 ... Q5SHQ0 30476222
    446952 6buw:YG (3.5) BS02 rna ? GO:0000049 ... Q5SHQ0 30476222
    446953 6buw:YG (3.5) BS03 rna ? GO:0000049 ... Q5SHQ0 30476222
    446954 6buw:YH (3.5) BS01 rna ? GO:0002181 ... P0DOY8 30476222
    446955 6buw:YI (3.5) BS01 rna ? GO:0003735 ... Q5SLQ1 30476222
    446956 6buw:YI (3.5) BS02 rna ? GO:0003735 ... Q5SLQ1 30476222
    446957 6buw:YN (3.5) BS01 rna ? GO:0003729 ... P60488 30476222
    446958 6buw:YO (3.5) BS01 rna ? GO:0003735 ... Q5SHP8 30476222
    446959 6buw:YO (3.5) BS02 rna ? GO:0003735 ... Q5SHP8 30476222
    446960 6buw:YP (3.5) BS01 rna ? GO:0003735 ... Q5SHQ7 30476222
    446961 6buw:YQ (3.5) BS01 rna ? GO:0000049 ... P60489 30476222
    446962 6buw:YQ (3.5) BS02 rna ? GO:0000049 ... P60489 30476222
    446963 6buw:YR (3.5) BS01 rna ? GO:0003735 ... Q9Z9H5 30476222
    446964 6buw:YS (3.5) BS01 rna ? GO:0003735 ... Q5SHQ4 30476222
    446965 6buw:YS (3.5) BS02 rna ? GO:0003735 ... Q5SHQ4 30476222
    446966 6buw:YT (3.5) BS01 rna ? GO:0003735 ... P60490 30476222
    446967 6buw:YT (3.5) BS02 rna ? GO:0003735 ... P60490 30476222
    446968 6buw:YU (3.5) BS01 rna ? GO:0000027 ... P60491 30476222
    446969 6buw:YV (3.5) BS01 rna ? GO:0003723 ... P60492 30476222
    446970 6buw:YW (3.5) BS01 rna ? GO:0003735 ... Q5SHP3 30476222
    446971 6buw:YX (3.5) BS01 rna ? GO:0003735 ... Q5SHP0 30476222
    446972 6buw:YX (3.5) BS02 MG ? GO:0003735 ... Q5SHP0 30476222
    446973 6buw:YX (3.5) BS03 MG ? GO:0003735 ... Q5SHP0 30476222
    446974 6buw:YY (3.5) BS01 rna ? GO:0003723 ... Q5SHP9 30476222
    446975 6buw:YY (3.5) BS02 ZN ? GO:0003723 ... Q5SHP9 30476222
    446976 6buw:YY (3.5) BS03 MG ? GO:0003723 ... Q5SHP9 30476222
    446977 6buw:YZ (3.5) BS01 rna ? GO:0003723 ... Q5SHZ1 30476222
    446978 6buw:YZ (3.5) BS02 rna ? GO:0003723 ... Q5SHZ1 30476222
    446979 6bux:A (1.856) BS01 dna 3.5.4.38 GO:0003824 ... Q9HC16 29941968
    446980 6bux:A (1.856) BS02 ZN 3.5.4.38 GO:0003824 ... Q9HC16 29941968
    446981 6buy:A (2.1) BS01 GLY 3.4.11.2 GO:0001525 ... P15145 28465619
    446982 6buy:A (2.1) BS02 ZN 3.4.11.2 GO:0001525 ... P15145 28465619
    446983 6buz:A (3.92) BS01 dna ? GO:0000132 ... P49450 29269420
    446984 6buz:A (3.92) BS02 dna ? GO:0000132 ... P49450 29269420
    446985 6buz:B (3.92) BS01 dna ? GO:0000781 ... P62805 29269420
    446986 6buz:B (3.92) BS02 dna ? GO:0000781 ... P62805 29269420
    446987 6buz:C (3.92) BS01 dna ? GO:0000786 ... P04908 29269420
    446988 6buz:C (3.92) BS02 dna ? GO:0000786 ... P04908 29269420
    446989 6buz:D (3.92) BS01 dna ? GO:0000786 ... P06899 29269420
    446990 6buz:D (3.92) BS02 dna ? GO:0000786 ... P06899 29269420
    446991 6buz:E (3.92) BS01 dna ? GO:0000132 ... P49450 29269420
    446992 6buz:E (3.92) BS02 dna ? GO:0000132 ... P49450 29269420
    446993 6buz:F (3.92) BS01 dna ? GO:0000781 ... P62805 29269420
    446994 6buz:F (3.92) BS02 dna ? GO:0000781 ... P62805 29269420
    446995 6buz:G (3.92) BS01 dna ? GO:0000786 ... P04908 29269420
    446996 6buz:G (3.92) BS02 dna ? GO:0000786 ... P04908 29269420
    446997 6buz:H (3.92) BS01 dna ? GO:0000786 ... P06899 29269420
    446998 6buz:H (3.92) BS02 dna ? GO:0000786 ... P06899 29269420
    446999 6buz:N (3.92) BS01 dna ? GO:0007059 ... P0AEX9
    Q96H22
    29269420
    447000 6bv0:A (1.86) BS01 ARG 3.4.11.2 GO:0001525 ... P15145 28465619

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).