SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    447001 6bv0:A (1.86) BS02 ZN 3.4.11.2 GO:0001525 ... P15145 28465619
    447002 6bv1:A (2.0) BS01 ASP 3.4.11.2 GO:0001525 ... P15145 28465619
    447003 6bv1:A (2.0) BS02 ZN 3.4.11.2 GO:0001525 ... P15145 28465619
    447004 6bv2:A (2.14) BS01 ILE 3.4.11.2 GO:0001525 ... P15145 28465619
    447005 6bv2:A (2.14) BS02 ZN 3.4.11.2 GO:0001525 ... P15145 28465619
    447006 6bv3:A (2.2) BS01 LEU 3.4.11.2 GO:0001525 ... P15145 28465619
    447007 6bv3:A (2.2) BS02 ZN 3.4.11.2 GO:0001525 ... P15145 28465619
    447008 6bv4:A (2.02) BS01 MET 3.4.11.2 GO:0001525 ... P15145 28465619
    447009 6bv4:A (2.02) BS02 ZN 3.4.11.2 GO:0001525 ... P15145 28465619
    447010 6bv5:A (1.79) BS01 JUG 3.1.26.5 N/A Q66GI4 N/A
    447011 6bv5:A (1.79) BS02 ZN 3.1.26.5 N/A Q66GI4 N/A
    447012 6bv6:A (2.2) BS01 JUG 3.1.26.5 N/A Q66GI4 N/A
    447013 6bv6:A (2.2) BS02 JUG 3.1.26.5 N/A Q66GI4 N/A
    447014 6bv6:A (2.2) BS03 JUG 3.1.26.5 N/A Q66GI4 N/A
    447015 6bv6:A (2.2) BS04 ZN 3.1.26.5 N/A Q66GI4 N/A
    447016 6bv8:A (2.1) BS01 JUG 3.1.26.5 N/A Q66GI4 N/A
    447017 6bv8:A (2.1) BS02 ZN 3.1.26.5 N/A Q66GI4 N/A
    447018 6bv9:A (2.1) BS01 JUG 3.1.26.5 N/A Q66GI4 N/A
    447019 6bv9:A (2.1) BS02 JUG 3.1.26.5 N/A Q66GI4 N/A
    447020 6bv9:A (2.1) BS03 JUG 3.1.26.5 N/A Q66GI4 N/A
    447021 6bv9:A (2.1) BS04 ZN 3.1.26.5 N/A Q66GI4 N/A
    447022 6bvb:V (2.002) BS01 peptide ? N/A P40337 30135421
    447023 6bvc:A (1.808) BS01 COA ? GO:0016740 ... Q53396 N/A
    447024 6bvd:A (2.09) BS01 CA ? GO:0004222 ... A0A384E125 29688327
    447025 6bvd:A (2.09) BS02 ZN ? GO:0004222 ... A0A384E125 29688327
    447026 6bvd:B (2.09) BS01 CA ? GO:0004222 ... A0A384E125 29688327
    447027 6bvd:B (2.09) BS02 ZN ? GO:0004222 ... A0A384E125 29688327
    447028 6bve:A (1.78) BS01 PGA 5.3.1.1 GO:0004807 ... Q59994 30538993
    447029 6bve:B (1.78) BS01 PGA 5.3.1.1 GO:0004807 ... Q59994 30538993
    447030 6bvf:B (4.0) BS01 E9D ? GO:0005198 ... P03147 29377794
    447031 6bvf:C (4.0) BS01 E9D ? GO:0005198 ... P03147 29377794
    447032 6bvf:C (4.0) BS02 E9D ? GO:0005198 ... P03147 29377794
    447033 6bvg:A (3.2) BS01 GLC 2.7.1.69 GO:0008982 ... Q63GK8 29784777
    447034 6bvg:A (3.2) BS02 GLC 2.7.1.69 GO:0008982 ... Q63GK8 29784777
    447035 6bvg:B (3.2) BS01 GLC 2.7.1.69 GO:0008982 ... Q63GK8 29784777
    447036 6bvg:B (3.2) BS02 GLC 2.7.1.69 GO:0008982 ... Q63GK8 29784777
    447037 6bvh:A (1.927) BS01 peptide 3.4.21.4 GO:0004175 ... P00760 30668585
    447038 6bvh:A (1.927) BS02 CA 3.4.21.4 GO:0004175 ... P00760 30668585
    447039 6bvi:A (1.746) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 29856609
    447040 6bvi:A (1.746) BS02 MG 3.6.5.2 GO:0003924 ... P01112 29856609
    447041 6bvi:B (1.746) BS01 EC4 ? GO:0005085 ... Q07889 29856609 BindingDB: EC50=1400nM
    447042 6bvj:A (1.747) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 29856609
    447043 6bvj:A (1.747) BS02 MG 3.6.5.2 GO:0003924 ... P01112 29856609
    447044 6bvj:B (1.747) BS01 EAS ? GO:0005085 ... Q07889 29856609 BindingDB: EC50=1600nM
    447045 6bvk:A (1.799) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 29856609
    447046 6bvk:A (1.799) BS02 MG 3.6.5.2 GO:0003924 ... P01112 29856609
    447047 6bvk:B (1.799) BS01 EAV ? GO:0005085 ... Q07889 29856609 BindingDB: EC50=3100nM
    447048 6bvl:A (1.748) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 29856609
    447049 6bvl:A (1.748) BS02 MG 3.6.5.2 GO:0003924 ... P01112 29856609
    447050 6bvl:B (1.748) BS01 EBY ? GO:0005085 ... Q07889 29856609 BindingDB: EC50=5900nM
    447051 6bvm:A (1.796) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 29856609
    447052 6bvm:A (1.796) BS02 MG 3.6.5.2 GO:0003924 ... P01112 29856609
    447053 6bvm:B (1.796) BS01 EBV ? GO:0005085 ... Q07889 29856609
    447054 6bvn:B (4.0) BS01 E9D ? GO:0005198 ... P03147 29377794
    447055 6bvn:C (4.0) BS01 E9D ? GO:0005198 ... P03147 29377794
    447056 6bvp:A (1.903) BS01 FE2 1.13.11.6 GO:0000334 ... Q1LCS4 29784877
    447057 6bvp:A (1.903) BS02 FE2 1.13.11.6 GO:0000334 ... Q1LCS4 29784877
    447058 6bvq:A (2.084) BS01 FE2 1.13.11.6 GO:0000334 ... Q1LCS4 29784877
    447059 6bvq:A (2.084) BS02 FE2 1.13.11.6 GO:0000334 ... Q1LCS4 29784877
    447060 6bvq:A (2.084) BS03 4AA 1.13.11.6 GO:0000334 ... Q1LCS4 29784877
    447061 6bvr:A (1.9) BS01 FE2 1.13.11.6 GO:0000334 ... Q1LCS4 29784877
    447062 6bvr:A (1.9) BS02 FE2 1.13.11.6 GO:0000334 ... Q1LCS4 29784877
    447063 6bvs:A (2.318) BS01 4AA 1.13.11.6 GO:0000334 ... Q1LCS4 29784877
    447064 6bvs:A (2.318) BS02 FE2 1.13.11.6 GO:0000334 ... Q1LCS4 29784877
    447065 6bvs:A (2.318) BS03 FE2 1.13.11.6 GO:0000334 ... Q1LCS4 29784877
    447066 6bvv:A (2.3) BS01 peptide ? GO:0005737 ... O00629 30209309
    447067 6bw0:E (2.1) BS01 peptide ? GO:0005737 ... P52293 30209309
    447068 6bw1:E (2.2) BS01 peptide ? GO:0005737 ... P52293 30209309
    447069 6bw2:A (2.75) BS01 ECY ? GO:0042981 ... Q07820 29323899 BindingDB: Ki=21nM
    447070 6bw2:B (2.75) BS01 ECY ? GO:0042981 ... Q07820 29323899 BindingDB: Ki=21nM
    447071 6bw2:C (2.75) BS01 ECY ? GO:0042981 ... Q07820 29323899 BindingDB: Ki=21nM
    447072 6bw2:D (2.75) BS01 ECY ? GO:0042981 ... Q07820 29323899 BindingDB: Ki=21nM
    447073 6bw3:A (2.2) BS01 peptide ? GO:0000118 ... Q09028 30462309
    447074 6bw3:C (2.2) BS01 peptide ? GO:0000118 ... Q09028 30462309
    447075 6bw4:A (2.0) BS01 peptide ? GO:0000118 ... Q09028 30462309
    447076 6bw4:C (2.0) BS01 peptide ? GO:0000118 ... Q09028 30462309
    447077 6bw5:A (3.1) BS01 TUM 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447078 6bw5:A (3.1) BS02 PGW 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447079 6bw5:A (3.1) BS03 PGW 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447080 6bw5:B (3.1) BS01 PGW 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447081 6bw5:B (3.1) BS02 TUM 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447082 6bw5:B (3.1) BS03 PGW 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447083 6bw5:C (3.1) BS01 TUM 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447084 6bw5:C (3.1) BS02 PGW 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447085 6bw5:C (3.1) BS03 PGW 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447086 6bw5:D (3.1) BS01 PGW 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447087 6bw5:D (3.1) BS02 TUM 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447088 6bw5:D (3.1) BS03 PGW 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447089 6bw6:A (2.95) BS01 TUM 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447090 6bw6:A (2.95) BS02 PGW 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447091 6bw6:A (2.95) BS03 PGW 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447092 6bw6:B (2.95) BS01 PGW 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447093 6bw6:B (2.95) BS02 PGW 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447094 6bw6:B (2.95) BS03 TUM 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447095 6bw6:C (2.95) BS01 TUM 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447096 6bw6:C (2.95) BS02 PGW 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447097 6bw6:C (2.95) BS03 PGW 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447098 6bw6:D (2.95) BS01 PGW 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447099 6bw6:D (2.95) BS02 PGW 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447100 6bw6:D (2.95) BS03 TUM 2.7.8.15 GO:0003975 ... Q9H3H5 29459785
    447101 6bw8:A (2.9) BS01 ECM ? GO:0042981 ... Q07820 29323899 BindingDB: Ki=<1.000000nM
    447102 6bw8:B (2.9) BS01 ECM ? GO:0042981 ... Q07820 29323899 BindingDB: Ki=<1.000000nM
    447103 6bw8:C (2.9) BS01 ECM ? GO:0042981 ... Q07820 29323899 BindingDB: Ki=<1.000000nM
    447104 6bw8:D (2.9) BS01 ECM ? GO:0042981 ... Q07820 29323899 BindingDB: Ki=<1.000000nM
    447105 6bw9:A (1.6) BS01 peptide ? GO:0005737 ... O00629 30209309
    447106 6bwa:A (2.2) BS01 peptide ? GO:0005737 ... O00629 30209309
    447107 6bwb:A (2.3) BS01 peptide ? GO:0005737 ... O00629 30209309
    447108 6bwc:A (2.7) BS01 NAP N/A N/A N/A 29266550
    447109 6bwc:A (2.7) BS02 UD1 N/A N/A N/A 29266550
    447110 6bwc:B (2.7) BS01 NAP N/A N/A N/A 29266550
    447111 6bwc:B (2.7) BS02 UD1 N/A N/A N/A 29266550
    447112 6bwc:C (2.7) BS01 NAP N/A N/A N/A 29266550
    447113 6bwc:C (2.7) BS02 UD1 N/A N/A N/A 29266550
    447114 6bwc:D (2.7) BS01 NAP N/A N/A N/A 29266550
    447115 6bwc:D (2.7) BS02 UD1 N/A N/A N/A 29266550
    447116 6bwc:E (2.7) BS01 NAP N/A N/A N/A 29266550
    447117 6bwc:E (2.7) BS02 UD1 N/A N/A N/A 29266550
    447118 6bwc:F (2.7) BS01 NAP N/A N/A N/A 29266550
    447119 6bwc:F (2.7) BS02 UD1 N/A N/A N/A 29266550
    447120 6bwd:A (3.7) BS01 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447121 6bwd:A (3.7) BS02 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447122 6bwd:A (3.7) BS03 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447123 6bwd:A (3.7) BS04 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447124 6bwd:A (3.7) BS05 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447125 6bwd:A (3.7) BS06 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447126 6bwd:B (3.7) BS01 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447127 6bwd:B (3.7) BS02 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447128 6bwd:B (3.7) BS03 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447129 6bwd:B (3.7) BS04 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447130 6bwd:B (3.7) BS05 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447131 6bwd:B (3.7) BS06 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447132 6bwd:C (3.7) BS01 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447133 6bwd:C (3.7) BS02 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447134 6bwd:C (3.7) BS03 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447135 6bwd:C (3.7) BS04 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447136 6bwd:C (3.7) BS05 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447137 6bwd:D (3.7) BS01 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447138 6bwd:D (3.7) BS02 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447139 6bwd:D (3.7) BS03 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447140 6bwd:D (3.7) BS04 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447141 6bwd:D (3.7) BS05 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447142 6bwd:D (3.7) BS06 Y01 2.7.11.1 GO:0005216 ... Q923J1 30108148
    447143 6bwh:A (2.18) BS01 PEP 2.7.7.105 GO:0005525 ... P9WP83 30952857
    447144 6bwh:A (2.18) BS02 MG 2.7.7.105 GO:0005525 ... P9WP83 30952857
    447145 6bwh:A (2.18) BS03 MG 2.7.7.105 GO:0005525 ... P9WP83 30952857
    447146 6bwh:B (2.18) BS01 PEP 2.7.7.105 GO:0005525 ... P9WP83 30952857
    447147 6bwh:B (2.18) BS02 MG 2.7.7.105 GO:0005525 ... P9WP83 30952857
    447148 6bwh:B (2.18) BS03 MG 2.7.7.105 GO:0005525 ... P9WP83 30952857
    447149 6bwh:C (2.18) BS01 PEP 2.7.7.105 GO:0005525 ... P9WP83 30952857
    447150 6bwh:C (2.18) BS02 MG 2.7.7.105 GO:0005525 ... P9WP83 30952857
    447151 6bwh:C (2.18) BS03 MG 2.7.7.105 GO:0005525 ... P9WP83 30952857
    447152 6bwi:A (3.7) BS01 Y01 ? GO:0005216 ... Q8TD43 29463718
    447153 6bwi:A (3.7) BS02 Y01 ? GO:0005216 ... Q8TD43 29463718
    447154 6bwi:A (3.7) BS03 Y01 ? GO:0005216 ... Q8TD43 29463718
    447155 6bwi:A (3.7) BS04 Y01 ? GO:0005216 ... Q8TD43 29463718
    447156 6bwi:A (3.7) BS05 Y01 ? GO:0005216 ... Q8TD43 29463718
    447157 6bwi:A (3.7) BS06 Y01 ? GO:0005216 ... Q8TD43 29463718
    447158 6bwi:A (3.7) BS07 Y01 ? GO:0005216 ... Q8TD43 29463718
    447159 6bwi:B (3.7) BS01 Y01 ? GO:0005216 ... Q8TD43 29463718
    447160 6bwi:B (3.7) BS02 Y01 ? GO:0005216 ... Q8TD43 29463718
    447161 6bwi:B (3.7) BS03 Y01 ? GO:0005216 ... Q8TD43 29463718
    447162 6bwi:B (3.7) BS04 Y01 ? GO:0005216 ... Q8TD43 29463718
    447163 6bwi:C (3.7) BS01 Y01 ? GO:0005216 ... Q8TD43 29463718
    447164 6bwi:C (3.7) BS02 Y01 ? GO:0005216 ... Q8TD43 29463718
    447165 6bwi:C (3.7) BS03 Y01 ? GO:0005216 ... Q8TD43 29463718
    447166 6bwi:C (3.7) BS04 Y01 ? GO:0005216 ... Q8TD43 29463718
    447167 6bwi:C (3.7) BS05 Y01 ? GO:0005216 ... Q8TD43 29463718
    447168 6bwi:C (3.7) BS06 Y01 ? GO:0005216 ... Q8TD43 29463718
    447169 6bwi:D (3.7) BS01 Y01 ? GO:0005216 ... Q8TD43 29463718
    447170 6bwi:D (3.7) BS02 Y01 ? GO:0005216 ... Q8TD43 29463718
    447171 6bwi:D (3.7) BS03 Y01 ? GO:0005216 ... Q8TD43 29463718
    447172 6bwi:D (3.7) BS04 Y01 ? GO:0005216 ... Q8TD43 29463718
    447173 6bwi:D (3.7) BS05 Y01 ? GO:0005216 ... Q8TD43 29463718
    447174 6bwj:A (3.1) BS01 6EU ? GO:0005216 ... G1SNM3 29728656
    447175 6bwj:A (3.1) BS02 6EU ? GO:0005216 ... G1SNM3 29728656
    447176 6bwj:B (3.1) BS01 6EU ? GO:0005216 ... G1SNM3 29728656
    447177 6bwl:A (1.45) BS01 NAD 4.2.1.46 GO:0000166 ... Q3ESA4 29266550
    447178 6bwl:A (1.45) BS02 UDP 4.2.1.46 GO:0000166 ... Q3ESA4 29266550
    447179 6bwn:A (2.94) BS01 CA ? GO:0005509 ... Q99PJ1 32963095
    447180 6bwn:A (2.94) BS02 CA ? GO:0005509 ... Q99PJ1 32963095
    447181 6bwp:A (1.7) BS01 HEM ? GO:0004601 ... P69905 29634905
    447182 6bwp:B (1.7) BS01 HEM ? GO:0004601 ... P68871 29634905
    447183 6bwp:B (1.7) BS02 EBJ ? GO:0004601 ... P68871 29634905
    447184 6bwp:C (1.7) BS01 HEM ? GO:0004601 ... P69905 29634905
    447185 6bwp:D (1.7) BS01 HEM ? GO:0004601 ... P68871 29634905
    447186 6bwp:D (1.7) BS02 EBJ ? GO:0004601 ... P68871 29634905
    447187 6bwq:A (1.85) BS01 CTP 4.99.1.12 N/A F9UST1 29887527
    447188 6bwq:B (1.85) BS01 CTP 4.99.1.12 N/A F9UST1 29887527
    447189 6bwu:A (2.0) BS01 HEM ? GO:0004601 ... P69905 29634905
    447190 6bwu:B (2.0) BS01 HEM ? GO:0004601 ... P68871 29634905
    447191 6bwu:B (2.0) BS02 EBJ ? GO:0004601 ... P68871 29634905
    447192 6bww:A (2.1) BS01 HEM 1.14.14.1 GO:0004497 ... P00178 29730233
    447193 6bww:A (2.1) BS02 CM5 1.14.14.1 GO:0004497 ... P00178 29730233
    447194 6bww:A (2.1) BS03 CM5 1.14.14.1 GO:0004497 ... P00178 29730233
    447195 6bww:A (2.1) BS04 ACT 1.14.14.1 GO:0004497 ... P00178 29730233
    447196 6bww:A (2.1) BS05 ACT 1.14.14.1 GO:0004497 ... P00178 29730233
    447197 6bww:A (2.1) BS06 ACT 1.14.14.1 GO:0004497 ... P00178 29730233
    447198 6bww:A (2.1) BS07 ACT 1.14.14.1 GO:0004497 ... P00178 29730233
    447199 6bww:A (2.1) BS08 ACT 1.14.14.1 GO:0004497 ... P00178 29730233
    447200 6bww:A (2.1) BS09 ACT 1.14.14.1 GO:0004497 ... P00178 29730233

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).