SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    449201 6c9h:C (2.65) BS02 AMP ? GO:0004691 ... P54619 30478170
    449202 6c9h:C (2.65) BS03 AMP ? GO:0004691 ... P54619 30478170
    449203 6c9j:A (3.05) BS01 R34 2.7.11.1
    2.7.11.26
    2.7.11.31
    GO:0004672 ... Q13131 30478170
    449204 6c9j:A (3.05) BS02 STU 2.7.11.1
    2.7.11.26
    2.7.11.31
    GO:0004672 ... Q13131 30478170
    449205 6c9j:B (3.05) BS01 R34 ? N/A Q9Y478 30478170
    449206 6c9j:C (3.05) BS01 AMP ? GO:0004691 ... P54619 30478170
    449207 6c9m:A (2.8) BS01 IHP ? GO:0001525 ... Q9BXJ9 29754825
    449208 6c9m:C (2.8) BS01 IHP ? GO:0001525 ... Q9BXJ9 29754825
    449209 6c9n:A (2.1) BS01 SGV 2.7.1.20 GO:0000287 ... P9WID5 31002508 BindingDB: IC50=16500nM
    449210 6c9n:A (2.1) BS02 SGV 2.7.1.20 GO:0000287 ... P9WID5 31002508 BindingDB: IC50=16500nM
    449211 6c9n:B (2.1) BS01 SGV 2.7.1.20 GO:0000287 ... P9WID5 31002508 BindingDB: IC50=16500nM
    449212 6c9n:B (2.1) BS02 SGV 2.7.1.20 GO:0000287 ... P9WID5 31002508 BindingDB: IC50=16500nM
    449213 6c9p:A (2.0) BS01 MTP 2.7.1.20 GO:0000287 ... P9WID5 31002508 BindingDB: IC50=2300nM
    449214 6c9p:A (2.0) BS02 MTP 2.7.1.20 GO:0000287 ... P9WID5 31002508 BindingDB: IC50=2300nM
    449215 6c9p:B (2.0) BS01 MTP 2.7.1.20 GO:0000287 ... P9WID5 31002508 BindingDB: IC50=2300nM
    449216 6c9p:B (2.0) BS02 MTP 2.7.1.20 GO:0000287 ... P9WID5 31002508 BindingDB: IC50=2300nM
    449217 6c9q:A (1.95) BS01 5N5 2.7.1.20 GO:0000287 ... P9WID5 31002508 BindingDB: IC50=8000nM
    449218 6c9r:A (2.1) BS01 ERJ 2.7.1.20 GO:0000287 ... P9WID5 31002508 BindingDB: IC50=197nM
    449219 6c9r:A (2.1) BS02 ERJ 2.7.1.20 GO:0000287 ... P9WID5 31002508 BindingDB: IC50=197nM
    449220 6c9r:B (2.1) BS01 ERJ 2.7.1.20 GO:0000287 ... P9WID5 31002508 BindingDB: IC50=197nM
    449221 6c9r:B (2.1) BS02 ERJ 2.7.1.20 GO:0000287 ... P9WID5 31002508 BindingDB: IC50=197nM
    449222 6c9s:A (2.23) BS01 ERP 2.7.1.20 GO:0000287 ... P9WID5 31002508 BindingDB: Ki=48nM
    449223 6c9s:A (2.23) BS02 ERP 2.7.1.20 GO:0000287 ... P9WID5 31002508 BindingDB: Ki=48nM
    449224 6c9s:B (2.23) BS01 ERP 2.7.1.20 GO:0000287 ... P9WID5 31002508 BindingDB: Ki=48nM
    449225 6c9s:B (2.23) BS02 ERP 2.7.1.20 GO:0000287 ... P9WID5 31002508 BindingDB: Ki=48nM
    449226 6c9v:A (1.7) BS01 ERS 2.7.1.20 GO:0000287 ... P9WID5 31002508 MOAD: Ki=120.2nM
    BindingDB: Ki=120nM
    449227 6c9v:B (1.7) BS01 ERS 2.7.1.20 GO:0000287 ... P9WID5 31002508 MOAD: Ki=120.2nM
    BindingDB: Ki=120nM
    449228 6c9w:A (3.0) BS01 9PG ? GO:0005351 ... P02920 30108145
    449229 6c9x:A (1.457) BS01 VOG 3.2.1.- GO:0003824 ... A5ZY13 N/A
    449230 6c9x:B (1.457) BS01 VOG 3.2.1.- GO:0003824 ... A5ZY13 N/A
    449231 6c9y:D (4.25) BS01 MG 2.7.7.6 GO:0000287 ... P0A8T7 29581236
    449232 6c9y:D (4.25) BS02 ZN 2.7.7.6 GO:0000287 ... P0A8T7 29581236
    449233 6c9y:D (4.25) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 29581236
    449234 6c9z:A (2.101) BS01 VOG 3.2.1.- GO:0003824 ... A5ZY13 N/A
    449235 6c9z:B (2.101) BS01 VOG 3.2.1.- GO:0003824 ... A5ZY13 N/A
    449236 6ca0:C (5.75) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 29581236
    449237 6ca0:D (5.75) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 29581236
    449238 6ca0:D (5.75) BS02 MG 2.7.7.6 GO:0000287 ... P0A8T7 29581236
    449239 6ca0:D (5.75) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 29581236
    449240 6ca0:F (5.75) BS01 dna ? GO:0000345 ... P00579 29581236
    449241 6ca0:F (5.75) BS02 dna ? GO:0000345 ... P00579 29581236
    449242 6ca1:A (1.95) BS01 MIG 3.2.1.- GO:0003824 ... A5ZY13 N/A
    449243 6ca1:B (1.95) BS01 MIG 3.2.1.- GO:0003824 ... A5ZY13 N/A
    449244 6ca2:A (2.5) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 1932029
    449245 6ca3:A (1.743) BS01 MIG 3.2.1.- GO:0003824 ... A5ZY13 N/A
    449246 6ca3:B (1.743) BS01 MIG 3.2.1.- GO:0003824 ... A5ZY13 N/A
    449247 6ca4:A (1.623) BS01 MG 3.1.4.- GO:0003824 ... Q5XJA0 29574079
    449248 6ca4:B (1.623) BS01 MG 3.1.4.- GO:0003824 ... Q5XJA0 29574079
    449249 6ca4:C (1.623) BS01 MG 3.1.4.- GO:0003824 ... Q5XJA0 29574079
    449250 6cac:A (1.79) BS01 ZN 3.5.2.6 N/A C7C422 30348667
    449251 6cac:A (1.79) BS02 CO 3.5.2.6 N/A C7C422 30348667
    449252 6cac:A (1.79) BS03 CA 3.5.2.6 N/A C7C422 30348667
    449253 6cac:B (1.79) BS01 ZN 3.5.2.6 N/A C7C422 30348667
    449254 6cac:B (1.79) BS02 CO 3.5.2.6 N/A C7C422 30348667
    449255 6cac:B (1.79) BS03 CA 3.5.2.6 N/A C7C422 30348667
    449256 6cac:C (1.79) BS01 ZN 3.5.2.6 N/A C7C422 30348667
    449257 6cac:C (1.79) BS02 CO 3.5.2.6 N/A C7C422 30348667
    449258 6cac:C (1.79) BS03 CA 3.5.2.6 N/A C7C422 30348667
    449259 6cac:D (1.79) BS01 ZN 3.5.2.6 N/A C7C422 30348667
    449260 6cac:D (1.79) BS02 CO 3.5.2.6 N/A C7C422 30348667
    449261 6cac:D (1.79) BS03 CA 3.5.2.6 N/A C7C422 30348667
    449262 6cad:A (2.55) BS01 EU4 2.7.11.1 GO:0004672 ... P15056 29407977 BindingDB: IC50=>10000nM
    449263 6cad:B (2.55) BS01 EU4 2.7.11.1 GO:0004672 ... P15056 29407977 BindingDB: IC50=>10000nM
    449264 6cae:10 (2.6) BS01 rna ? GO:0003735 ... P60493 29625040
    449265 6cae:10 (2.6) BS02 rna ? GO:0003735 ... P60493 29625040
    449266 6cae:10 (2.6) BS03 MG ? GO:0003735 ... P60493 29625040
    449267 6cae:10 (2.6) BS04 MG ? GO:0003735 ... P60493 29625040
    449268 6cae:11 (2.6) BS01 rna ? GO:0003735 ... P60494 29625040
    449269 6cae:11 (2.6) BS02 rna ? GO:0003735 ... P60494 29625040
    449270 6cae:11 (2.6) BS03 MG ? GO:0003735 ... P60494 29625040
    449271 6cae:12 (2.6) BS01 rna ? GO:0003735 ... Q5SHP6 29625040
    449272 6cae:12 (2.6) BS02 MG ? GO:0003735 ... Q5SHP6 29625040
    449273 6cae:13 (2.6) BS01 rna ? GO:0003735 ... Q5SHQ6 29625040
    449274 6cae:13 (2.6) BS02 rna ? GO:0003735 ... Q5SHQ6 29625040
    449275 6cae:13 (2.6) BS03 MG ? GO:0003735 ... Q5SHQ6 29625040
    449276 6cae:13 (2.6) BS04 MG ? GO:0003735 ... Q5SHQ6 29625040
    449277 6cae:14 (2.6) BS01 rna ? GO:0003735 ... Q5SJE1 29625040
    449278 6cae:14 (2.6) BS02 ZN ? GO:0003735 ... Q5SJE1 29625040
    449279 6cae:15 (2.6) BS01 rna ? GO:0003735 ... P80339 29625040
    449280 6cae:15 (2.6) BS02 MG ? GO:0003735 ... P80339 29625040
    449281 6cae:15 (2.6) BS03 MG ? GO:0003735 ... P80339 29625040
    449282 6cae:15 (2.6) BS04 MG ? GO:0003735 ... P80339 29625040
    449283 6cae:15 (2.6) BS05 ZN ? GO:0003735 ... P80339 29625040
    449284 6cae:16 (2.6) BS01 rna ? GO:0000049 ... P35871 29625040
    449285 6cae:16 (2.6) BS02 MG ? GO:0000049 ... P35871 29625040
    449286 6cae:16 (2.6) BS03 ZN ? GO:0000049 ... P35871 29625040
    449287 6cae:16 (2.6) BS04 MG ? GO:0000049 ... P35871 29625040
    449288 6cae:17 (2.6) BS01 rna ? GO:0003735 ... P80340 29625040
    449289 6cae:17 (2.6) BS02 MG ? GO:0003735 ... P80340 29625040
    449290 6cae:17 (2.6) BS03 MG ? GO:0003735 ... P80340 29625040
    449291 6cae:18 (2.6) BS01 rna ? GO:0003735 ... Q5SKU1 29625040
    449292 6cae:18 (2.6) BS02 MG ? GO:0003735 ... Q5SKU1 29625040
    449293 6cae:18 (2.6) BS03 MG ? GO:0003735 ... Q5SKU1 29625040
    449294 6cae:18 (2.6) BS04 MG ? GO:0003735 ... Q5SKU1 29625040
    449295 6cae:19 (2.6) BS01 rna ? GO:0003735 ... Q5SHR2 29625040
    449296 6cae:19 (2.6) BS02 ZN ? GO:0003735 ... Q5SHR2 29625040
    449297 6cae:1D (2.6) BS01 rna ? GO:0002181 ... P60405 29625040
    449298 6cae:1D (2.6) BS02 rna ? GO:0002181 ... P60405 29625040
    449299 6cae:1D (2.6) BS03 MG ? GO:0002181 ... P60405 29625040
    449300 6cae:1D (2.6) BS04 MG ? GO:0002181 ... P60405 29625040
    449301 6cae:1D (2.6) BS05 MG ? GO:0002181 ... P60405 29625040
    449302 6cae:1D (2.6) BS06 MG ? GO:0002181 ... P60405 29625040
    449303 6cae:1D (2.6) BS07 MG ? GO:0002181 ... P60405 29625040
    449304 6cae:1D (2.6) BS08 MG ? GO:0002181 ... P60405 29625040
    449305 6cae:1D (2.6) BS09 MG ? GO:0002181 ... P60405 29625040
    449306 6cae:1D (2.6) BS10 MG ? GO:0002181 ... P60405 29625040
    449307 6cae:1D (2.6) BS11 MG ? GO:0002181 ... P60405 29625040
    449308 6cae:1D (2.6) BS12 MG ? GO:0002181 ... P60405 29625040
    449309 6cae:1E (2.6) BS01 rna ? GO:0003735 ... Q5SHN8 29625040
    449310 6cae:1E (2.6) BS02 MG ? GO:0003735 ... Q5SHN8 29625040
    449311 6cae:1E (2.6) BS03 MG ? GO:0003735 ... Q5SHN8 29625040
    449312 6cae:1E (2.6) BS04 MG ? GO:0003735 ... Q5SHN8 29625040
    449313 6cae:1E (2.6) BS05 MG ? GO:0003735 ... Q5SHN8 29625040
    449314 6cae:1E (2.6) BS06 MG ? GO:0003735 ... Q5SHN8 29625040
    449315 6cae:1F (2.6) BS01 rna ? GO:0003735 ... Q5SHN9 29625040
    449316 6cae:1F (2.6) BS02 MG ? GO:0003735 ... Q5SHN9 29625040
    449317 6cae:1F (2.6) BS03 MG ? GO:0003735 ... Q5SHN9 29625040
    449318 6cae:1F (2.6) BS04 MG ? GO:0003735 ... Q5SHN9 29625040
    449319 6cae:1F (2.6) BS05 MG ? GO:0003735 ... Q5SHN9 29625040
    449320 6cae:1F (2.6) BS06 MG ? GO:0003735 ... Q5SHN9 29625040
    449321 6cae:1F (2.6) BS07 MG ? GO:0003735 ... Q5SHN9 29625040
    449322 6cae:1F (2.6) BS08 MG ? GO:0003735 ... Q5SHN9 29625040
    449323 6cae:1F (2.6) BS09 MG ? GO:0003735 ... Q5SHN9 29625040
    449324 6cae:1G (2.6) BS01 rna ? GO:0000049 ... Q5SHQ0 29625040
    449325 6cae:1G (2.6) BS02 rna ? GO:0000049 ... Q5SHQ0 29625040
    449326 6cae:1G (2.6) BS03 rna ? GO:0000049 ... Q5SHQ0 29625040
    449327 6cae:1G (2.6) BS04 MG ? GO:0000049 ... Q5SHQ0 29625040
    449328 6cae:1G (2.6) BS05 MG ? GO:0000049 ... Q5SHQ0 29625040
    449329 6cae:1G (2.6) BS06 MG ? GO:0000049 ... Q5SHQ0 29625040
    449330 6cae:1H (2.6) BS01 rna ? GO:0002181 ... P0DOY8 29625040
    449331 6cae:1I (2.6) BS01 rna ? GO:0003735 ... Q5SLQ1 29625040
    449332 6cae:1N (2.6) BS01 rna ? GO:0003729 ... P60488 29625040
    449333 6cae:1N (2.6) BS02 MG ? GO:0003729 ... P60488 29625040
    449334 6cae:1N (2.6) BS03 MG ? GO:0003729 ... P60488 29625040
    449335 6cae:1N (2.6) BS04 MG ? GO:0003729 ... P60488 29625040
    449336 6cae:1O (2.6) BS01 rna ? GO:0003735 ... Q5SHP8 29625040
    449337 6cae:1O (2.6) BS02 rna ? GO:0003735 ... Q5SHP8 29625040
    449338 6cae:1O (2.6) BS03 peptide ? GO:0003735 ... Q5SHP8 29625040
    449339 6cae:1O (2.6) BS04 MG ? GO:0003735 ... Q5SHP8 29625040
    449340 6cae:1O (2.6) BS05 MG ? GO:0003735 ... Q5SHP8 29625040
    449341 6cae:1O (2.6) BS06 MG ? GO:0003735 ... Q5SHP8 29625040
    449342 6cae:1P (2.6) BS01 rna ? GO:0003735 ... Q5SHQ7 29625040
    449343 6cae:1P (2.6) BS02 MG ? GO:0003735 ... Q5SHQ7 29625040
    449344 6cae:1P (2.6) BS03 MG ? GO:0003735 ... Q5SHQ7 29625040
    449345 6cae:1P (2.6) BS04 MG ? GO:0003735 ... Q5SHQ7 29625040
    449346 6cae:1P (2.6) BS05 MG ? GO:0003735 ... Q5SHQ7 29625040
    449347 6cae:1P (2.6) BS06 MG ? GO:0003735 ... Q5SHQ7 29625040
    449348 6cae:1Q (2.6) BS01 rna ? GO:0000049 ... P60489 29625040
    449349 6cae:1Q (2.6) BS02 rna ? GO:0000049 ... P60489 29625040
    449350 6cae:1Q (2.6) BS03 rna ? GO:0000049 ... P60489 29625040
    449351 6cae:1Q (2.6) BS04 MG ? GO:0000049 ... P60489 29625040
    449352 6cae:1Q (2.6) BS05 MG ? GO:0000049 ... P60489 29625040
    449353 6cae:1Q (2.6) BS06 MG ? GO:0000049 ... P60489 29625040
    449354 6cae:1Q (2.6) BS07 MG ? GO:0000049 ... P60489 29625040
    449355 6cae:1R (2.6) BS01 rna ? GO:0003735 ... Q9Z9H5 29625040
    449356 6cae:1R (2.6) BS02 MG ? GO:0003735 ... Q9Z9H5 29625040
    449357 6cae:1R (2.6) BS03 MG ? GO:0003735 ... Q9Z9H5 29625040
    449358 6cae:1S (2.6) BS01 rna ? GO:0003735 ... Q5SHQ4 29625040
    449359 6cae:1S (2.6) BS02 rna ? GO:0003735 ... Q5SHQ4 29625040
    449360 6cae:1S (2.6) BS03 MG ? GO:0003735 ... Q5SHQ4 29625040
    449361 6cae:1S (2.6) BS04 MG ? GO:0003735 ... Q5SHQ4 29625040
    449362 6cae:1T (2.6) BS01 rna ? GO:0003735 ... P60490 29625040
    449363 6cae:1T (2.6) BS02 rna ? GO:0003735 ... P60490 29625040
    449364 6cae:1T (2.6) BS03 MG ? GO:0003735 ... P60490 29625040
    449365 6cae:1U (2.6) BS01 rna ? GO:0000027 ... P60491 29625040
    449366 6cae:1U (2.6) BS02 MG ? GO:0000027 ... P60491 29625040
    449367 6cae:1U (2.6) BS03 MG ? GO:0000027 ... P60491 29625040
    449368 6cae:1U (2.6) BS04 MG ? GO:0000027 ... P60491 29625040
    449369 6cae:1U (2.6) BS05 MG ? GO:0000027 ... P60491 29625040
    449370 6cae:1U (2.6) BS06 MG ? GO:0000027 ... P60491 29625040
    449371 6cae:1U (2.6) BS07 MG ? GO:0000027 ... P60491 29625040
    449372 6cae:1U (2.6) BS08 MG ? GO:0000027 ... P60491 29625040
    449373 6cae:1U (2.6) BS09 MG ? GO:0000027 ... P60491 29625040
    449374 6cae:1V (2.6) BS01 rna ? GO:0003723 ... P60492 29625040
    449375 6cae:1V (2.6) BS02 MG ? GO:0003723 ... P60492 29625040
    449376 6cae:1V (2.6) BS03 MG ? GO:0003723 ... P60492 29625040
    449377 6cae:1V (2.6) BS04 MG ? GO:0003723 ... P60492 29625040
    449378 6cae:1V (2.6) BS05 MG ? GO:0003723 ... P60492 29625040
    449379 6cae:1V (2.6) BS06 MG ? GO:0003723 ... P60492 29625040
    449380 6cae:1V (2.6) BS07 MG ? GO:0003723 ... P60492 29625040
    449381 6cae:1W (2.6) BS01 rna ? GO:0003735 ... Q5SHP3 29625040
    449382 6cae:1W (2.6) BS02 MG ? GO:0003735 ... Q5SHP3 29625040
    449383 6cae:1W (2.6) BS03 MG ? GO:0003735 ... Q5SHP3 29625040
    449384 6cae:1X (2.6) BS01 rna ? GO:0003735 ... Q5SHP0 29625040
    449385 6cae:1X (2.6) BS02 MG ? GO:0003735 ... Q5SHP0 29625040
    449386 6cae:1X (2.6) BS03 MG ? GO:0003735 ... Q5SHP0 29625040
    449387 6cae:1X (2.6) BS04 MG ? GO:0003735 ... Q5SHP0 29625040
    449388 6cae:1X (2.6) BS05 MG ? GO:0003735 ... Q5SHP0 29625040
    449389 6cae:1X (2.6) BS06 MG ? GO:0003735 ... Q5SHP0 29625040
    449390 6cae:1Y (2.6) BS01 rna ? GO:0003723 ... Q5SHP9 29625040
    449391 6cae:1Y (2.6) BS02 ZN ? GO:0003723 ... Q5SHP9 29625040
    449392 6cae:1Y (2.6) BS03 MG ? GO:0003723 ... Q5SHP9 29625040
    449393 6cae:1Z (2.6) BS01 rna ? GO:0003723 ... Q5SHZ1 29625040
    449394 6cae:1Z (2.6) BS02 rna ? GO:0003723 ... Q5SHZ1 29625040
    449395 6cae:1b (2.6) BS01 rna ? GO:0003735 ... P80371 29625040
    449396 6cae:1b (2.6) BS02 MG ? GO:0003735 ... P80371 29625040
    449397 6cae:1c (2.6) BS01 rna ? GO:0003676 ... P80372 29625040
    449398 6cae:1d (2.6) BS01 rna ? GO:0003723 ... P80373 29625040
    449399 6cae:1d (2.6) BS02 SF4 ? GO:0003723 ... P80373 29625040
    449400 6cae:1e (2.6) BS01 rna ? GO:0003723 ... Q5SHQ5 29625040

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).