SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    449401 6cae:1e (2.6) BS02 MG ? GO:0003723 ... Q5SHQ5 29625040
    449402 6cae:1e (2.6) BS03 MG ? GO:0003723 ... Q5SHQ5 29625040
    449403 6cae:1f (2.6) BS01 rna ? GO:0003735 ... Q5SLP8 29625040
    449404 6cae:1g (2.6) BS01 rna ? GO:0000049 ... P17291 29625040
    449405 6cae:1g (2.6) BS02 rna ? GO:0000049 ... P17291 29625040
    449406 6cae:1h (2.6) BS01 rna ? GO:0003735 ... P0DOY9 29625040
    449407 6cae:1i (2.6) BS01 rna ? GO:0000049 ... P80374 29625040
    449408 6cae:1i (2.6) BS02 rna ? GO:0000049 ... P80374 29625040
    449409 6cae:1j (2.6) BS01 rna ? GO:0000049 ... Q5SHN7 29625040
    449410 6cae:1k (2.6) BS01 rna ? GO:0003735 ... P80376 29625040
    449411 6cae:1k (2.6) BS02 MG ? GO:0003735 ... P80376 29625040
    449412 6cae:1l (2.6) BS01 rna ? GO:0000049 ... Q5SHN3 29625040
    449413 6cae:1l (2.6) BS02 rna ? GO:0000049 ... Q5SHN3 29625040
    449414 6cae:1l (2.6) BS03 MG ? GO:0000049 ... Q5SHN3 29625040
    449415 6cae:1m (2.6) BS01 rna ? GO:0000049 ... P80377 29625040
    449416 6cae:1m (2.6) BS02 rna ? GO:0000049 ... P80377 29625040
    449417 6cae:1m (2.6) BS03 rna ? GO:0000049 ... P80377 29625040
    449418 6cae:1m (2.6) BS04 MG ? GO:0000049 ... P80377 29625040
    449419 6cae:1n (2.6) BS01 rna ? GO:0003735 ... P0DOY6 29625040
    449420 6cae:1n (2.6) BS02 ZN ? GO:0003735 ... P0DOY6 29625040
    449421 6cae:1o (2.6) BS01 rna ? GO:0003735 ... Q5SJ76 29625040
    449422 6cae:1o (2.6) BS02 rna ? GO:0003735 ... Q5SJ76 29625040
    449423 6cae:1p (2.6) BS01 rna ? GO:0003735 ... Q5SJH3 29625040
    449424 6cae:1q (2.6) BS01 rna ? GO:0003735 ... P0DOY7 29625040
    449425 6cae:1r (2.6) BS01 rna ? GO:0003735 ... Q5SLQ0 29625040
    449426 6cae:1s (2.6) BS01 rna ? GO:0000028 ... Q5SHP2 29625040
    449427 6cae:1t (2.6) BS01 rna ? GO:0003723 ... P80380 29625040
    449428 6cae:20 (2.6) BS01 rna ? GO:0003735 ... P60493 29625040
    449429 6cae:20 (2.6) BS02 rna ? GO:0003735 ... P60493 29625040
    449430 6cae:20 (2.6) BS03 MG ? GO:0003735 ... P60493 29625040
    449431 6cae:21 (2.6) BS01 rna ? GO:0003735 ... P60494 29625040
    449432 6cae:21 (2.6) BS02 rna ? GO:0003735 ... P60494 29625040
    449433 6cae:21 (2.6) BS03 MG ? GO:0003735 ... P60494 29625040
    449434 6cae:22 (2.6) BS01 rna ? GO:0003735 ... Q5SHP6 29625040
    449435 6cae:23 (2.6) BS01 rna ? GO:0003735 ... Q5SHQ6 29625040
    449436 6cae:23 (2.6) BS02 rna ? GO:0003735 ... Q5SHQ6 29625040
    449437 6cae:23 (2.6) BS03 MG ? GO:0003735 ... Q5SHQ6 29625040
    449438 6cae:23 (2.6) BS04 MG ? GO:0003735 ... Q5SHQ6 29625040
    449439 6cae:24 (2.6) BS01 rna ? GO:0003735 ... Q5SJE1 29625040
    449440 6cae:24 (2.6) BS02 ZN ? GO:0003735 ... Q5SJE1 29625040
    449441 6cae:25 (2.6) BS01 rna ? GO:0003735 ... P80339 29625040
    449442 6cae:25 (2.6) BS02 MG ? GO:0003735 ... P80339 29625040
    449443 6cae:25 (2.6) BS03 ZN ? GO:0003735 ... P80339 29625040
    449444 6cae:25 (2.6) BS04 MG ? GO:0003735 ... P80339 29625040
    449445 6cae:26 (2.6) BS01 rna ? GO:0000049 ... P35871 29625040
    449446 6cae:26 (2.6) BS02 ZN ? GO:0000049 ... P35871 29625040
    449447 6cae:27 (2.6) BS01 rna ? GO:0003735 ... P80340 29625040
    449448 6cae:28 (2.6) BS01 rna ? GO:0003735 ... Q5SKU1 29625040
    449449 6cae:29 (2.6) BS01 rna ? GO:0003735 ... Q5SHR2 29625040
    449450 6cae:29 (2.6) BS02 ZN ? GO:0003735 ... Q5SHR2 29625040
    449451 6cae:2D (2.6) BS01 rna ? GO:0002181 ... P60405 29625040
    449452 6cae:2D (2.6) BS02 rna ? GO:0002181 ... P60405 29625040
    449453 6cae:2D (2.6) BS03 MG ? GO:0002181 ... P60405 29625040
    449454 6cae:2D (2.6) BS04 MG ? GO:0002181 ... P60405 29625040
    449455 6cae:2D (2.6) BS05 MG ? GO:0002181 ... P60405 29625040
    449456 6cae:2D (2.6) BS06 MG ? GO:0002181 ... P60405 29625040
    449457 6cae:2D (2.6) BS07 MG ? GO:0002181 ... P60405 29625040
    449458 6cae:2E (2.6) BS01 rna ? GO:0003735 ... Q5SHN8 29625040
    449459 6cae:2E (2.6) BS02 MG ? GO:0003735 ... Q5SHN8 29625040
    449460 6cae:2F (2.6) BS01 rna ? GO:0003735 ... Q5SHN9 29625040
    449461 6cae:2F (2.6) BS02 MG ? GO:0003735 ... Q5SHN9 29625040
    449462 6cae:2F (2.6) BS03 MG ? GO:0003735 ... Q5SHN9 29625040
    449463 6cae:2F (2.6) BS04 MG ? GO:0003735 ... Q5SHN9 29625040
    449464 6cae:2G (2.6) BS01 rna ? GO:0000049 ... Q5SHQ0 29625040
    449465 6cae:2G (2.6) BS02 rna ? GO:0000049 ... Q5SHQ0 29625040
    449466 6cae:2G (2.6) BS03 rna ? GO:0000049 ... Q5SHQ0 29625040
    449467 6cae:2G (2.6) BS04 MG ? GO:0000049 ... Q5SHQ0 29625040
    449468 6cae:2H (2.6) BS01 rna ? GO:0002181 ... P0DOY8 29625040
    449469 6cae:2I (2.6) BS01 rna ? GO:0003735 ... Q5SLQ1 29625040
    449470 6cae:2N (2.6) BS01 rna ? GO:0003729 ... P60488 29625040
    449471 6cae:2O (2.6) BS01 rna ? GO:0003735 ... Q5SHP8 29625040
    449472 6cae:2O (2.6) BS02 rna ? GO:0003735 ... Q5SHP8 29625040
    449473 6cae:2P (2.6) BS01 rna ? GO:0003735 ... Q5SHQ7 29625040
    449474 6cae:2Q (2.6) BS01 rna ? GO:0000049 ... P60489 29625040
    449475 6cae:2Q (2.6) BS02 rna ? GO:0000049 ... P60489 29625040
    449476 6cae:2Q (2.6) BS03 MG ? GO:0000049 ... P60489 29625040
    449477 6cae:2Q (2.6) BS04 MG ? GO:0000049 ... P60489 29625040
    449478 6cae:2Q (2.6) BS05 MG ? GO:0000049 ... P60489 29625040
    449479 6cae:2R (2.6) BS01 rna ? GO:0003735 ... Q9Z9H5 29625040
    449480 6cae:2S (2.6) BS01 rna ? GO:0003735 ... Q5SHQ4 29625040
    449481 6cae:2S (2.6) BS02 rna ? GO:0003735 ... Q5SHQ4 29625040
    449482 6cae:2T (2.6) BS01 rna ? GO:0003735 ... P60490 29625040
    449483 6cae:2T (2.6) BS02 rna ? GO:0003735 ... P60490 29625040
    449484 6cae:2T (2.6) BS03 MG ? GO:0003735 ... P60490 29625040
    449485 6cae:2U (2.6) BS01 rna ? GO:0000027 ... P60491 29625040
    449486 6cae:2U (2.6) BS02 MG ? GO:0000027 ... P60491 29625040
    449487 6cae:2U (2.6) BS03 MG ? GO:0000027 ... P60491 29625040
    449488 6cae:2U (2.6) BS04 MG ? GO:0000027 ... P60491 29625040
    449489 6cae:2V (2.6) BS01 rna ? GO:0003723 ... P60492 29625040
    449490 6cae:2V (2.6) BS02 MG ? GO:0003723 ... P60492 29625040
    449491 6cae:2V (2.6) BS03 MG ? GO:0003723 ... P60492 29625040
    449492 6cae:2W (2.6) BS01 rna ? GO:0003735 ... Q5SHP3 29625040
    449493 6cae:2W (2.6) BS02 MG ? GO:0003735 ... Q5SHP3 29625040
    449494 6cae:2W (2.6) BS03 MG ? GO:0003735 ... Q5SHP3 29625040
    449495 6cae:2X (2.6) BS01 rna ? GO:0003735 ... Q5SHP0 29625040
    449496 6cae:2X (2.6) BS02 MG ? GO:0003735 ... Q5SHP0 29625040
    449497 6cae:2Y (2.6) BS01 rna ? GO:0003723 ... Q5SHP9 29625040
    449498 6cae:2Y (2.6) BS02 ZN ? GO:0003723 ... Q5SHP9 29625040
    449499 6cae:2Z (2.6) BS01 rna ? GO:0003723 ... Q5SHZ1 29625040
    449500 6cae:2Z (2.6) BS02 rna ? GO:0003723 ... Q5SHZ1 29625040
    449501 6cae:2Z (2.6) BS03 MG ? GO:0003723 ... Q5SHZ1 29625040
    449502 6cae:2b (2.6) BS01 rna ? GO:0003735 ... P80371 29625040
    449503 6cae:2c (2.6) BS01 rna ? GO:0003676 ... P80372 29625040
    449504 6cae:2d (2.6) BS01 rna ? GO:0003723 ... P80373 29625040
    449505 6cae:2d (2.6) BS02 SF4 ? GO:0003723 ... P80373 29625040
    449506 6cae:2d (2.6) BS03 MG ? GO:0003723 ... P80373 29625040
    449507 6cae:2e (2.6) BS01 rna ? GO:0003723 ... Q5SHQ5 29625040
    449508 6cae:2e (2.6) BS02 MG ? GO:0003723 ... Q5SHQ5 29625040
    449509 6cae:2f (2.6) BS01 rna ? GO:0003735 ... Q5SLP8 29625040
    449510 6cae:2f (2.6) BS02 MG ? GO:0003735 ... Q5SLP8 29625040
    449511 6cae:2g (2.6) BS01 rna ? GO:0000049 ... P17291 29625040
    449512 6cae:2g (2.6) BS02 rna ? GO:0000049 ... P17291 29625040
    449513 6cae:2h (2.6) BS01 rna ? GO:0003735 ... P0DOY9 29625040
    449514 6cae:2i (2.6) BS01 rna ? GO:0000049 ... P80374 29625040
    449515 6cae:2i (2.6) BS02 rna ? GO:0000049 ... P80374 29625040
    449516 6cae:2j (2.6) BS01 rna ? GO:0000049 ... Q5SHN7 29625040
    449517 6cae:2k (2.6) BS01 rna ? GO:0003735 ... P80376 29625040
    449518 6cae:2k (2.6) BS02 MG ? GO:0003735 ... P80376 29625040
    449519 6cae:2l (2.6) BS01 rna ? GO:0000049 ... Q5SHN3 29625040
    449520 6cae:2l (2.6) BS02 MG ? GO:0000049 ... Q5SHN3 29625040
    449521 6cae:2l (2.6) BS03 MG ? GO:0000049 ... Q5SHN3 29625040
    449522 6cae:2m (2.6) BS01 rna ? GO:0000049 ... P80377 29625040
    449523 6cae:2m (2.6) BS02 rna ? GO:0000049 ... P80377 29625040
    449524 6cae:2n (2.6) BS01 rna ? GO:0003735 ... P0DOY6 29625040
    449525 6cae:2n (2.6) BS02 ZN ? GO:0003735 ... P0DOY6 29625040
    449526 6cae:2o (2.6) BS01 rna ? GO:0003735 ... Q5SJ76 29625040
    449527 6cae:2o (2.6) BS02 rna ? GO:0003735 ... Q5SJ76 29625040
    449528 6cae:2p (2.6) BS01 rna ? GO:0003735 ... Q5SJH3 29625040
    449529 6cae:2q (2.6) BS01 rna ? GO:0003735 ... P0DOY7 29625040
    449530 6cae:2q (2.6) BS02 MG ? GO:0003735 ... P0DOY7 29625040
    449531 6cae:2q (2.6) BS03 MG ? GO:0003735 ... P0DOY7 29625040
    449532 6cae:2r (2.6) BS01 rna ? GO:0003735 ... Q5SLQ0 29625040
    449533 6cae:2s (2.6) BS01 rna ? GO:0000028 ... Q5SHP2 29625040
    449534 6cae:2t (2.6) BS01 rna ? GO:0003723 ... P80380 29625040
    449535 6cae:2t (2.6) BS02 MG ? GO:0003723 ... P80380 29625040
    449536 6caj:C (2.8) BS01 C7B ? GO:0001541 ... P49770 29599213
    449537 6caj:D (2.8) BS01 C7B ? GO:0001541 ... P49770 29599213
    449538 6cam:A (1.75) BS01 CA ? N/A Q8DTF1 29685986
    449539 6cam:A (1.75) BS02 BGC ? N/A Q8DTF1 29685986
    449540 6cam:A (1.75) BS03 BGC ? N/A Q8DTF1 29685986
    449541 6can:A (2.2) BS01 CL 3.4.21.26 GO:0004252 ... Q51714 30786206
    449542 6can:A (2.2) BS02 CL 3.4.21.26 GO:0004252 ... Q51714 30786206
    449543 6can:B (2.2) BS01 CL 3.4.21.26 GO:0004252 ... Q51714 30786206
    449544 6can:B (2.2) BS02 CL 3.4.21.26 GO:0004252 ... Q51714 30786206
    449545 6cao:B (3.45) BS01 rna ? GO:0003735 ... P80371 30139800
    449546 6cao:C (3.45) BS01 rna ? GO:0003676 ... P80372 30139800
    449547 6cao:D (3.45) BS01 rna ? GO:0003723 ... P80373 30139800
    449548 6cao:D (3.45) BS02 MG ? GO:0003723 ... P80373 30139800
    449549 6cao:E (3.45) BS01 rna ? GO:0003723 ... Q5SHQ5 30139800
    449550 6cao:F (3.45) BS01 rna ? GO:0003735 ... Q5SLP8 30139800
    449551 6cao:G (3.45) BS01 rna ? GO:0000049 ... P17291 30139800
    449552 6cao:H (3.45) BS01 rna ? GO:0003735 ... P0DOY9 30139800
    449553 6cao:I (3.45) BS01 rna ? GO:0000049 ... P80374 30139800
    449554 6cao:J (3.45) BS01 rna ? GO:0000049 ... Q5SHN7 30139800
    449555 6cao:K (3.45) BS01 rna ? GO:0003735 ... P80376 30139800
    449556 6cao:L (3.45) BS01 rna ? GO:0000049 ... Q5SHN3 30139800
    449557 6cao:M (3.45) BS01 rna ? GO:0000049 ... P80377 30139800
    449558 6cao:M (3.45) BS02 MG ? GO:0000049 ... P80377 30139800
    449559 6cao:N (3.45) BS01 rna ? GO:0003735 ... P0DOY6 30139800
    449560 6cao:N (3.45) BS02 ZN ? GO:0003735 ... P0DOY6 30139800
    449561 6cao:O (3.45) BS01 rna ? GO:0003735 ... Q5SJ76 30139800
    449562 6cao:P (3.45) BS01 rna ? GO:0003735 ... Q5SJH3 30139800
    449563 6cao:Q (3.45) BS01 rna ? GO:0003735 ... P0DOY7 30139800
    449564 6cao:Q (3.45) BS02 MG ? GO:0003735 ... P0DOY7 30139800
    449565 6cao:R (3.45) BS01 rna ? GO:0003735 ... Q5SLQ0 30139800
    449566 6cao:S (3.45) BS01 rna ? GO:0003723 ... Q5SHP2 30139800
    449567 6cao:S (3.45) BS02 MG ? GO:0003723 ... Q5SHP2 30139800
    449568 6cao:T (3.45) BS01 rna ? GO:0003723 ... P80380 30139800
    449569 6cao:T (3.45) BS02 MG ? GO:0003723 ... P80380 30139800
    449570 6cap:B (3.4) BS01 rna ? GO:0003735 ... P80371 N/A
    449571 6cap:B (3.4) BS02 MG ? GO:0003735 ... P80371 N/A
    449572 6cap:C (3.4) BS01 rna ? GO:0003676 ... P80372 N/A
    449573 6cap:C (3.4) BS02 MG ? GO:0003676 ... P80372 N/A
    449574 6cap:C (3.4) BS03 MG ? GO:0003676 ... P80372 N/A
    449575 6cap:D (3.4) BS01 rna ? GO:0003723 ... P80373 N/A
    449576 6cap:E (3.4) BS01 rna ? GO:0003723 ... Q5SHQ5 N/A
    449577 6cap:F (3.4) BS01 rna ? GO:0003735 ... Q5SLP8 N/A
    449578 6cap:G (3.4) BS01 rna ? GO:0000049 ... P17291 N/A
    449579 6cap:H (3.4) BS01 rna ? GO:0003735 ... P0DOY9 N/A
    449580 6cap:I (3.4) BS01 rna ? GO:0000049 ... P80374 N/A
    449581 6cap:J (3.4) BS01 rna ? GO:0000049 ... Q5SHN7 N/A
    449582 6cap:J (3.4) BS02 MG ? GO:0000049 ... Q5SHN7 N/A
    449583 6cap:K (3.4) BS01 rna ? GO:0003735 ... P80376 N/A
    449584 6cap:L (3.4) BS01 rna ? GO:0000049 ... Q5SHN3 N/A
    449585 6cap:M (3.4) BS01 rna ? GO:0000049 ... P80377 N/A
    449586 6cap:N (3.4) BS01 rna ? GO:0003735 ... P0DOY6 N/A
    449587 6cap:N (3.4) BS02 ZN ? GO:0003735 ... P0DOY6 N/A
    449588 6cap:O (3.4) BS01 rna ? GO:0003735 ... Q5SJ76 N/A
    449589 6cap:P (3.4) BS01 rna ? GO:0003735 ... Q5SJH3 N/A
    449590 6cap:Q (3.4) BS01 rna ? GO:0003735 ... P0DOY7 N/A
    449591 6cap:Q (3.4) BS02 MG ? GO:0003735 ... P0DOY7 N/A
    449592 6cap:R (3.4) BS01 rna ? GO:0003735 ... Q5SLQ0 N/A
    449593 6cap:S (3.4) BS01 rna ? GO:0003723 ... Q5SHP2 N/A
    449594 6cap:T (3.4) BS01 rna ? GO:0003723 ... P80380 N/A
    449595 6caq:B (3.4) BS01 rna ? GO:0003735 ... P80371 N/A
    449596 6caq:B (3.4) BS02 MG ? GO:0003735 ... P80371 N/A
    449597 6caq:C (3.4) BS01 rna ? GO:0003676 ... P80372 N/A
    449598 6caq:C (3.4) BS02 MG ? GO:0003676 ... P80372 N/A
    449599 6caq:C (3.4) BS03 MG ? GO:0003676 ... P80372 N/A
    449600 6caq:D (3.4) BS01 rna ? GO:0003723 ... P80373 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).