SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    450201 6cfj:17 (2.8) BS03 MG ? GO:0003735 ... P80340 29410130
    450202 6cfj:18 (2.8) BS01 rna ? GO:0003735 ... Q5SKU1 29410130
    450203 6cfj:18 (2.8) BS02 MG ? GO:0003735 ... Q5SKU1 29410130
    450204 6cfj:18 (2.8) BS03 MG ? GO:0003735 ... Q5SKU1 29410130
    450205 6cfj:18 (2.8) BS04 MG ? GO:0003735 ... Q5SKU1 29410130
    450206 6cfj:18 (2.8) BS05 MG ? GO:0003735 ... Q5SKU1 29410130
    450207 6cfj:19 (2.8) BS01 rna ? GO:0003735 ... Q5SHR2 29410130
    450208 6cfj:19 (2.8) BS02 ZN ? GO:0003735 ... Q5SHR2 29410130
    450209 6cfj:1D (2.8) BS01 rna ? GO:0002181 ... P60405 29410130
    450210 6cfj:1D (2.8) BS02 rna ? GO:0002181 ... P60405 29410130
    450211 6cfj:1D (2.8) BS03 MG ? GO:0002181 ... P60405 29410130
    450212 6cfj:1D (2.8) BS04 MG ? GO:0002181 ... P60405 29410130
    450213 6cfj:1D (2.8) BS05 MG ? GO:0002181 ... P60405 29410130
    450214 6cfj:1D (2.8) BS06 MG ? GO:0002181 ... P60405 29410130
    450215 6cfj:1D (2.8) BS07 MG ? GO:0002181 ... P60405 29410130
    450216 6cfj:1D (2.8) BS08 MG ? GO:0002181 ... P60405 29410130
    450217 6cfj:1D (2.8) BS09 MG ? GO:0002181 ... P60405 29410130
    450218 6cfj:1D (2.8) BS10 MG ? GO:0002181 ... P60405 29410130
    450219 6cfj:1D (2.8) BS11 MG ? GO:0002181 ... P60405 29410130
    450220 6cfj:1D (2.8) BS12 MG ? GO:0002181 ... P60405 29410130
    450221 6cfj:1D (2.8) BS13 MG ? GO:0002181 ... P60405 29410130
    450222 6cfj:1D (2.8) BS14 MG ? GO:0002181 ... P60405 29410130
    450223 6cfj:1D (2.8) BS15 MG ? GO:0002181 ... P60405 29410130
    450224 6cfj:1E (2.8) BS01 rna ? GO:0003735 ... Q5SHN8 29410130
    450225 6cfj:1E (2.8) BS02 MG ? GO:0003735 ... Q5SHN8 29410130
    450226 6cfj:1E (2.8) BS03 MG ? GO:0003735 ... Q5SHN8 29410130
    450227 6cfj:1E (2.8) BS04 MG ? GO:0003735 ... Q5SHN8 29410130
    450228 6cfj:1F (2.8) BS01 rna ? GO:0003735 ... Q5SHN9 29410130
    450229 6cfj:1F (2.8) BS02 MG ? GO:0003735 ... Q5SHN9 29410130
    450230 6cfj:1F (2.8) BS03 MG ? GO:0003735 ... Q5SHN9 29410130
    450231 6cfj:1F (2.8) BS04 MG ? GO:0003735 ... Q5SHN9 29410130
    450232 6cfj:1F (2.8) BS05 MG ? GO:0003735 ... Q5SHN9 29410130
    450233 6cfj:1F (2.8) BS06 MG ? GO:0003735 ... Q5SHN9 29410130
    450234 6cfj:1F (2.8) BS07 MG ? GO:0003735 ... Q5SHN9 29410130
    450235 6cfj:1F (2.8) BS08 MG ? GO:0003735 ... Q5SHN9 29410130
    450236 6cfj:1F (2.8) BS09 MG ? GO:0003735 ... Q5SHN9 29410130
    450237 6cfj:1F (2.8) BS10 MG ? GO:0003735 ... Q5SHN9 29410130
    450238 6cfj:1F (2.8) BS11 MG ? GO:0003735 ... Q5SHN9 29410130
    450239 6cfj:1F (2.8) BS12 MG ? GO:0003735 ... Q5SHN9 29410130
    450240 6cfj:1F (2.8) BS13 MG ? GO:0003735 ... Q5SHN9 29410130
    450241 6cfj:1G (2.8) BS01 rna ? GO:0000049 ... Q5SHQ0 29410130
    450242 6cfj:1G (2.8) BS02 rna ? GO:0000049 ... Q5SHQ0 29410130
    450243 6cfj:1G (2.8) BS03 rna ? GO:0000049 ... Q5SHQ0 29410130
    450244 6cfj:1G (2.8) BS04 MG ? GO:0000049 ... Q5SHQ0 29410130
    450245 6cfj:1H (2.8) BS01 rna ? GO:0002181 ... P0DOY8 29410130
    450246 6cfj:1I (2.8) BS01 rna ? GO:0003735 ... Q5SLQ1 29410130
    450247 6cfj:1I (2.8) BS02 MG ? GO:0003735 ... Q5SLQ1 29410130
    450248 6cfj:1N (2.8) BS01 rna ? GO:0003729 ... P60488 29410130
    450249 6cfj:1N (2.8) BS02 MG ? GO:0003729 ... P60488 29410130
    450250 6cfj:1N (2.8) BS03 MG ? GO:0003729 ... P60488 29410130
    450251 6cfj:1N (2.8) BS04 MG ? GO:0003729 ... P60488 29410130
    450252 6cfj:1O (2.8) BS01 rna ? GO:0003735 ... Q5SHP8 29410130
    450253 6cfj:1O (2.8) BS02 rna ? GO:0003735 ... Q5SHP8 29410130
    450254 6cfj:1O (2.8) BS03 MG ? GO:0003735 ... Q5SHP8 29410130
    450255 6cfj:1O (2.8) BS04 MG ? GO:0003735 ... Q5SHP8 29410130
    450256 6cfj:1P (2.8) BS01 rna ? GO:0003735 ... Q5SHQ7 29410130
    450257 6cfj:1P (2.8) BS02 MG ? GO:0003735 ... Q5SHQ7 29410130
    450258 6cfj:1P (2.8) BS03 MG ? GO:0003735 ... Q5SHQ7 29410130
    450259 6cfj:1P (2.8) BS04 MG ? GO:0003735 ... Q5SHQ7 29410130
    450260 6cfj:1Q (2.8) BS01 rna ? GO:0000049 ... P60489 29410130
    450261 6cfj:1Q (2.8) BS02 rna ? GO:0000049 ... P60489 29410130
    450262 6cfj:1Q (2.8) BS03 rna ? GO:0000049 ... P60489 29410130
    450263 6cfj:1Q (2.8) BS04 MG ? GO:0000049 ... P60489 29410130
    450264 6cfj:1Q (2.8) BS05 MG ? GO:0000049 ... P60489 29410130
    450265 6cfj:1Q (2.8) BS06 MG ? GO:0000049 ... P60489 29410130
    450266 6cfj:1Q (2.8) BS07 MG ? GO:0000049 ... P60489 29410130
    450267 6cfj:1Q (2.8) BS08 MG ? GO:0000049 ... P60489 29410130
    450268 6cfj:1R (2.8) BS01 rna ? GO:0003735 ... Q9Z9H5 29410130
    450269 6cfj:1R (2.8) BS02 MG ? GO:0003735 ... Q9Z9H5 29410130
    450270 6cfj:1S (2.8) BS01 rna ? GO:0003735 ... Q5SHQ4 29410130
    450271 6cfj:1S (2.8) BS02 rna ? GO:0003735 ... Q5SHQ4 29410130
    450272 6cfj:1S (2.8) BS03 MG ? GO:0003735 ... Q5SHQ4 29410130
    450273 6cfj:1S (2.8) BS04 MG ? GO:0003735 ... Q5SHQ4 29410130
    450274 6cfj:1T (2.8) BS01 rna ? GO:0003735 ... P60490 29410130
    450275 6cfj:1T (2.8) BS02 rna ? GO:0003735 ... P60490 29410130
    450276 6cfj:1T (2.8) BS03 MG ? GO:0003735 ... P60490 29410130
    450277 6cfj:1U (2.8) BS01 rna ? GO:0000027 ... P60491 29410130
    450278 6cfj:1U (2.8) BS02 MG ? GO:0000027 ... P60491 29410130
    450279 6cfj:1U (2.8) BS03 MG ? GO:0000027 ... P60491 29410130
    450280 6cfj:1U (2.8) BS04 MG ? GO:0000027 ... P60491 29410130
    450281 6cfj:1U (2.8) BS05 MG ? GO:0000027 ... P60491 29410130
    450282 6cfj:1U (2.8) BS06 MG ? GO:0000027 ... P60491 29410130
    450283 6cfj:1U (2.8) BS07 MG ? GO:0000027 ... P60491 29410130
    450284 6cfj:1U (2.8) BS08 MG ? GO:0000027 ... P60491 29410130
    450285 6cfj:1V (2.8) BS01 rna ? GO:0003723 ... P60492 29410130
    450286 6cfj:1V (2.8) BS02 MG ? GO:0003723 ... P60492 29410130
    450287 6cfj:1V (2.8) BS03 MG ? GO:0003723 ... P60492 29410130
    450288 6cfj:1V (2.8) BS04 MG ? GO:0003723 ... P60492 29410130
    450289 6cfj:1V (2.8) BS05 MG ? GO:0003723 ... P60492 29410130
    450290 6cfj:1V (2.8) BS06 MG ? GO:0003723 ... P60492 29410130
    450291 6cfj:1W (2.8) BS01 rna ? GO:0003735 ... Q5SHP3 29410130
    450292 6cfj:1W (2.8) BS02 MG ? GO:0003735 ... Q5SHP3 29410130
    450293 6cfj:1W (2.8) BS03 MG ? GO:0003735 ... Q5SHP3 29410130
    450294 6cfj:1W (2.8) BS04 MG ? GO:0003735 ... Q5SHP3 29410130
    450295 6cfj:1W (2.8) BS05 MG ? GO:0003735 ... Q5SHP3 29410130
    450296 6cfj:1X (2.8) BS01 rna ? GO:0003735 ... Q5SHP0 29410130
    450297 6cfj:1X (2.8) BS02 MG ? GO:0003735 ... Q5SHP0 29410130
    450298 6cfj:1X (2.8) BS03 MG ? GO:0003735 ... Q5SHP0 29410130
    450299 6cfj:1Y (2.8) BS01 rna ? GO:0003723 ... Q5SHP9 29410130
    450300 6cfj:1Y (2.8) BS02 MG ? GO:0003723 ... Q5SHP9 29410130
    450301 6cfj:1Y (2.8) BS03 ZN ? GO:0003723 ... Q5SHP9 29410130
    450302 6cfj:1Y (2.8) BS04 MG ? GO:0003723 ... Q5SHP9 29410130
    450303 6cfj:1Z (2.8) BS01 rna ? GO:0003723 ... Q5SHZ1 29410130
    450304 6cfj:1b (2.8) BS01 rna ? GO:0003735 ... P80371 29410130
    450305 6cfj:1b (2.8) BS02 MG ? GO:0003735 ... P80371 29410130
    450306 6cfj:1c (2.8) BS01 rna ? GO:0003676 ... P80372 29410130
    450307 6cfj:1d (2.8) BS01 rna ? GO:0003723 ... P80373 29410130
    450308 6cfj:1d (2.8) BS02 SF4 ? GO:0003723 ... P80373 29410130
    450309 6cfj:1e (2.8) BS01 rna ? GO:0003723 ... Q5SHQ5 29410130
    450310 6cfj:1e (2.8) BS02 MG ? GO:0003723 ... Q5SHQ5 29410130
    450311 6cfj:1e (2.8) BS03 MG ? GO:0003723 ... Q5SHQ5 29410130
    450312 6cfj:1f (2.8) BS01 rna ? GO:0003735 ... Q5SLP8 29410130
    450313 6cfj:1f (2.8) BS02 MG ? GO:0003735 ... Q5SLP8 29410130
    450314 6cfj:1g (2.8) BS01 rna ? GO:0000049 ... P17291 29410130
    450315 6cfj:1g (2.8) BS02 rna ? GO:0000049 ... P17291 29410130
    450316 6cfj:1h (2.8) BS01 rna ? GO:0003735 ... P0DOY9 29410130
    450317 6cfj:1i (2.8) BS01 rna ? GO:0000049 ... P80374 29410130
    450318 6cfj:1i (2.8) BS02 rna ? GO:0000049 ... P80374 29410130
    450319 6cfj:1j (2.8) BS01 rna ? GO:0000049 ... Q5SHN7 29410130
    450320 6cfj:1k (2.8) BS01 rna ? GO:0003735 ... P80376 29410130
    450321 6cfj:1k (2.8) BS02 MG ? GO:0003735 ... P80376 29410130
    450322 6cfj:1l (2.8) BS01 rna ? GO:0000049 ... Q5SHN3 29410130
    450323 6cfj:1l (2.8) BS02 MG ? GO:0000049 ... Q5SHN3 29410130
    450324 6cfj:1m (2.8) BS01 rna ? GO:0000049 ... P80377 29410130
    450325 6cfj:1m (2.8) BS02 rna ? GO:0000049 ... P80377 29410130
    450326 6cfj:1m (2.8) BS03 rna ? GO:0000049 ... P80377 29410130
    450327 6cfj:1m (2.8) BS04 MG ? GO:0000049 ... P80377 29410130
    450328 6cfj:1n (2.8) BS01 rna ? GO:0003735 ... P0DOY6 29410130
    450329 6cfj:1n (2.8) BS02 ZN ? GO:0003735 ... P0DOY6 29410130
    450330 6cfj:1n (2.8) BS03 MG ? GO:0003735 ... P0DOY6 29410130
    450331 6cfj:1o (2.8) BS01 rna ? GO:0003735 ... Q5SJ76 29410130
    450332 6cfj:1o (2.8) BS02 rna ? GO:0003735 ... Q5SJ76 29410130
    450333 6cfj:1p (2.8) BS01 rna ? GO:0003735 ... Q5SJH3 29410130
    450334 6cfj:1q (2.8) BS01 rna ? GO:0003735 ... P0DOY7 29410130
    450335 6cfj:1r (2.8) BS01 rna ? GO:0003735 ... Q5SLQ0 29410130
    450336 6cfj:1s (2.8) BS01 rna ? GO:0000028 ... Q5SHP2 29410130
    450337 6cfj:1t (2.8) BS01 rna ? GO:0003723 ... P80380 29410130
    450338 6cfj:1t (2.8) BS02 MG ? GO:0003723 ... P80380 29410130
    450339 6cfj:20 (2.8) BS01 rna ? GO:0003735 ... P60493 29410130
    450340 6cfj:20 (2.8) BS02 rna ? GO:0003735 ... P60493 29410130
    450341 6cfj:20 (2.8) BS03 rna ? GO:0003735 ... P60493 29410130
    450342 6cfj:20 (2.8) BS04 MG ? GO:0003735 ... P60493 29410130
    450343 6cfj:21 (2.8) BS01 rna ? GO:0003735 ... P60494 29410130
    450344 6cfj:21 (2.8) BS02 rna ? GO:0003735 ... P60494 29410130
    450345 6cfj:21 (2.8) BS03 MG ? GO:0003735 ... P60494 29410130
    450346 6cfj:22 (2.8) BS01 rna ? GO:0003735 ... Q5SHP6 29410130
    450347 6cfj:23 (2.8) BS01 rna ? GO:0003735 ... Q5SHQ6 29410130
    450348 6cfj:23 (2.8) BS02 rna ? GO:0003735 ... Q5SHQ6 29410130
    450349 6cfj:23 (2.8) BS03 MG ? GO:0003735 ... Q5SHQ6 29410130
    450350 6cfj:24 (2.8) BS01 rna ? GO:0003735 ... Q5SJE1 29410130
    450351 6cfj:24 (2.8) BS02 ZN ? GO:0003735 ... Q5SJE1 29410130
    450352 6cfj:25 (2.8) BS01 rna ? GO:0003735 ... P80339 29410130
    450353 6cfj:25 (2.8) BS02 ZN ? GO:0003735 ... P80339 29410130
    450354 6cfj:25 (2.8) BS03 MG ? GO:0003735 ... P80339 29410130
    450355 6cfj:26 (2.8) BS01 rna ? GO:0000049 ... P35871 29410130
    450356 6cfj:26 (2.8) BS02 ZN ? GO:0000049 ... P35871 29410130
    450357 6cfj:27 (2.8) BS01 rna ? GO:0003735 ... P80340 29410130
    450358 6cfj:27 (2.8) BS02 MG ? GO:0003735 ... P80340 29410130
    450359 6cfj:28 (2.8) BS01 rna ? GO:0003735 ... Q5SKU1 29410130
    450360 6cfj:29 (2.8) BS01 rna ? GO:0003735 ... Q5SHR2 29410130
    450361 6cfj:29 (2.8) BS02 ZN ? GO:0003735 ... Q5SHR2 29410130
    450362 6cfj:2D (2.8) BS01 rna ? GO:0002181 ... P60405 29410130
    450363 6cfj:2D (2.8) BS02 rna ? GO:0002181 ... P60405 29410130
    450364 6cfj:2D (2.8) BS03 MG ? GO:0002181 ... P60405 29410130
    450365 6cfj:2D (2.8) BS04 MG ? GO:0002181 ... P60405 29410130
    450366 6cfj:2D (2.8) BS05 MG ? GO:0002181 ... P60405 29410130
    450367 6cfj:2D (2.8) BS06 MG ? GO:0002181 ... P60405 29410130
    450368 6cfj:2D (2.8) BS07 MG ? GO:0002181 ... P60405 29410130
    450369 6cfj:2E (2.8) BS01 rna ? GO:0003735 ... Q5SHN8 29410130
    450370 6cfj:2F (2.8) BS01 rna ? GO:0003735 ... Q5SHN9 29410130
    450371 6cfj:2F (2.8) BS02 MG ? GO:0003735 ... Q5SHN9 29410130
    450372 6cfj:2F (2.8) BS03 MG ? GO:0003735 ... Q5SHN9 29410130
    450373 6cfj:2F (2.8) BS04 MG ? GO:0003735 ... Q5SHN9 29410130
    450374 6cfj:2G (2.8) BS01 rna ? GO:0000049 ... Q5SHQ0 29410130
    450375 6cfj:2G (2.8) BS02 rna ? GO:0000049 ... Q5SHQ0 29410130
    450376 6cfj:2G (2.8) BS03 rna ? GO:0000049 ... Q5SHQ0 29410130
    450377 6cfj:2G (2.8) BS04 MG ? GO:0000049 ... Q5SHQ0 29410130
    450378 6cfj:2H (2.8) BS01 rna ? GO:0002181 ... P0DOY8 29410130
    450379 6cfj:2I (2.8) BS01 rna ? GO:0003735 ... Q5SLQ1 29410130
    450380 6cfj:2N (2.8) BS01 rna ? GO:0003729 ... P60488 29410130
    450381 6cfj:2O (2.8) BS01 rna ? GO:0003735 ... Q5SHP8 29410130
    450382 6cfj:2O (2.8) BS02 rna ? GO:0003735 ... Q5SHP8 29410130
    450383 6cfj:2P (2.8) BS01 rna ? GO:0003735 ... Q5SHQ7 29410130
    450384 6cfj:2Q (2.8) BS01 rna ? GO:0000049 ... P60489 29410130
    450385 6cfj:2Q (2.8) BS02 rna ? GO:0000049 ... P60489 29410130
    450386 6cfj:2Q (2.8) BS03 rna ? GO:0000049 ... P60489 29410130
    450387 6cfj:2Q (2.8) BS04 MG ? GO:0000049 ... P60489 29410130
    450388 6cfj:2R (2.8) BS01 rna ? GO:0003735 ... Q9Z9H5 29410130
    450389 6cfj:2S (2.8) BS01 rna ? GO:0003735 ... Q5SHQ4 29410130
    450390 6cfj:2S (2.8) BS02 rna ? GO:0003735 ... Q5SHQ4 29410130
    450391 6cfj:2T (2.8) BS01 rna ? GO:0003735 ... P60490 29410130
    450392 6cfj:2T (2.8) BS02 rna ? GO:0003735 ... P60490 29410130
    450393 6cfj:2T (2.8) BS03 MG ? GO:0003735 ... P60490 29410130
    450394 6cfj:2U (2.8) BS01 rna ? GO:0000027 ... P60491 29410130
    450395 6cfj:2U (2.8) BS02 MG ? GO:0000027 ... P60491 29410130
    450396 6cfj:2U (2.8) BS03 MG ? GO:0000027 ... P60491 29410130
    450397 6cfj:2U (2.8) BS04 MG ? GO:0000027 ... P60491 29410130
    450398 6cfj:2V (2.8) BS01 rna ? GO:0003723 ... P60492 29410130
    450399 6cfj:2V (2.8) BS02 MG ? GO:0003723 ... P60492 29410130
    450400 6cfj:2V (2.8) BS03 MG ? GO:0003723 ... P60492 29410130

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).