SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    450601 6cfk:2E (2.7) BS02 MG ? GO:0003735 ... Q5SHN8 29410130
    450602 6cfk:2E (2.7) BS03 MG ? GO:0003735 ... Q5SHN8 29410130
    450603 6cfk:2F (2.7) BS01 rna ? GO:0003735 ... Q5SHN9 29410130
    450604 6cfk:2F (2.7) BS02 MG ? GO:0003735 ... Q5SHN9 29410130
    450605 6cfk:2F (2.7) BS03 MG ? GO:0003735 ... Q5SHN9 29410130
    450606 6cfk:2F (2.7) BS04 MG ? GO:0003735 ... Q5SHN9 29410130
    450607 6cfk:2G (2.7) BS01 rna ? GO:0000049 ... Q5SHQ0 29410130
    450608 6cfk:2G (2.7) BS02 rna ? GO:0000049 ... Q5SHQ0 29410130
    450609 6cfk:2G (2.7) BS03 MG ? GO:0000049 ... Q5SHQ0 29410130
    450610 6cfk:2H (2.7) BS01 rna ? GO:0002181 ... P0DOY8 29410130
    450611 6cfk:2I (2.7) BS01 rna ? GO:0003735 ... Q5SLQ1 29410130
    450612 6cfk:2I (2.7) BS02 MG ? GO:0003735 ... Q5SLQ1 29410130
    450613 6cfk:2N (2.7) BS01 rna ? GO:0003729 ... P60488 29410130
    450614 6cfk:2O (2.7) BS01 rna ? GO:0003735 ... Q5SHP8 29410130
    450615 6cfk:2O (2.7) BS02 rna ? GO:0003735 ... Q5SHP8 29410130
    450616 6cfk:2P (2.7) BS01 rna ? GO:0003735 ... Q5SHQ7 29410130
    450617 6cfk:2Q (2.7) BS01 rna ? GO:0000049 ... P60489 29410130
    450618 6cfk:2Q (2.7) BS02 rna ? GO:0000049 ... P60489 29410130
    450619 6cfk:2Q (2.7) BS03 MG ? GO:0000049 ... P60489 29410130
    450620 6cfk:2Q (2.7) BS04 MG ? GO:0000049 ... P60489 29410130
    450621 6cfk:2R (2.7) BS01 rna ? GO:0003735 ... Q9Z9H5 29410130
    450622 6cfk:2S (2.7) BS01 rna ? GO:0003735 ... Q5SHQ4 29410130
    450623 6cfk:2S (2.7) BS02 rna ? GO:0003735 ... Q5SHQ4 29410130
    450624 6cfk:2T (2.7) BS01 rna ? GO:0003735 ... P60490 29410130
    450625 6cfk:2T (2.7) BS02 rna ? GO:0003735 ... P60490 29410130
    450626 6cfk:2U (2.7) BS01 rna ? GO:0000027 ... P60491 29410130
    450627 6cfk:2U (2.7) BS02 MG ? GO:0000027 ... P60491 29410130
    450628 6cfk:2V (2.7) BS01 rna ? GO:0003723 ... P60492 29410130
    450629 6cfk:2V (2.7) BS02 MG ? GO:0003723 ... P60492 29410130
    450630 6cfk:2V (2.7) BS03 MG ? GO:0003723 ... P60492 29410130
    450631 6cfk:2W (2.7) BS01 rna ? GO:0003735 ... Q5SHP3 29410130
    450632 6cfk:2W (2.7) BS02 MG ? GO:0003735 ... Q5SHP3 29410130
    450633 6cfk:2X (2.7) BS01 rna ? GO:0003735 ... Q5SHP0 29410130
    450634 6cfk:2Y (2.7) BS01 rna ? GO:0003723 ... Q5SHP9 29410130
    450635 6cfk:2Y (2.7) BS02 ZN ? GO:0003723 ... Q5SHP9 29410130
    450636 6cfk:2Z (2.7) BS01 rna ? GO:0003723 ... Q5SHZ1 29410130
    450637 6cfk:2Z (2.7) BS02 rna ? GO:0003723 ... Q5SHZ1 29410130
    450638 6cfk:2b (2.7) BS01 rna ? GO:0003735 ... P80371 29410130
    450639 6cfk:2c (2.7) BS01 rna ? GO:0003676 ... P80372 29410130
    450640 6cfk:2d (2.7) BS01 rna ? GO:0003723 ... P80373 29410130
    450641 6cfk:2d (2.7) BS02 SF4 ? GO:0003723 ... P80373 29410130
    450642 6cfk:2e (2.7) BS01 rna ? GO:0003723 ... Q5SHQ5 29410130
    450643 6cfk:2f (2.7) BS01 rna ? GO:0003735 ... Q5SLP8 29410130
    450644 6cfk:2f (2.7) BS02 MG ? GO:0003735 ... Q5SLP8 29410130
    450645 6cfk:2g (2.7) BS01 rna ? GO:0000049 ... P17291 29410130
    450646 6cfk:2h (2.7) BS01 rna ? GO:0003735 ... P0DOY9 29410130
    450647 6cfk:2i (2.7) BS01 rna ? GO:0000049 ... P80374 29410130
    450648 6cfk:2j (2.7) BS01 rna ? GO:0000049 ... Q5SHN7 29410130
    450649 6cfk:2j (2.7) BS02 MG ? GO:0000049 ... Q5SHN7 29410130
    450650 6cfk:2k (2.7) BS01 rna ? GO:0003735 ... P80376 29410130
    450651 6cfk:2k (2.7) BS02 MG ? GO:0003735 ... P80376 29410130
    450652 6cfk:2l (2.7) BS01 rna ? GO:0000049 ... Q5SHN3 29410130
    450653 6cfk:2m (2.7) BS01 rna ? GO:0000049 ... P80377 29410130
    450654 6cfk:2n (2.7) BS01 rna ? GO:0003735 ... P0DOY6 29410130
    450655 6cfk:2n (2.7) BS02 ZN ? GO:0003735 ... P0DOY6 29410130
    450656 6cfk:2o (2.7) BS01 rna ? GO:0003735 ... Q5SJ76 29410130
    450657 6cfk:2o (2.7) BS02 rna ? GO:0003735 ... Q5SJ76 29410130
    450658 6cfk:2p (2.7) BS01 rna ? GO:0003735 ... Q5SJH3 29410130
    450659 6cfk:2q (2.7) BS01 rna ? GO:0003735 ... P0DOY7 29410130
    450660 6cfk:2r (2.7) BS01 rna ? GO:0003735 ... Q5SLQ0 29410130
    450661 6cfk:2s (2.7) BS01 rna ? GO:0000028 ... Q5SHP2 29410130
    450662 6cfk:2t (2.7) BS01 rna ? GO:0003723 ... P80380 29410130
    450663 6cfk:2t (2.7) BS02 MG ? GO:0003723 ... P80380 29410130
    450664 6cfk:2y (2.7) BS01 rna ? GO:0005515 ... P0AD49 29410130
    450665 6cfl:10 (2.6) BS01 rna ? GO:0003735 ... P60493 29410130
    450666 6cfl:10 (2.6) BS02 rna ? GO:0003735 ... P60493 29410130
    450667 6cfl:10 (2.6) BS03 MG ? GO:0003735 ... P60493 29410130
    450668 6cfl:10 (2.6) BS04 MG ? GO:0003735 ... P60493 29410130
    450669 6cfl:10 (2.6) BS05 MG ? GO:0003735 ... P60493 29410130
    450670 6cfl:11 (2.6) BS01 rna ? GO:0003735 ... P60494 29410130
    450671 6cfl:11 (2.6) BS02 MG ? GO:0003735 ... P60494 29410130
    450672 6cfl:12 (2.6) BS01 rna ? GO:0003735 ... Q5SHP6 29410130
    450673 6cfl:13 (2.6) BS01 rna ? GO:0003735 ... Q5SHQ6 29410130
    450674 6cfl:13 (2.6) BS02 rna ? GO:0003735 ... Q5SHQ6 29410130
    450675 6cfl:13 (2.6) BS03 MG ? GO:0003735 ... Q5SHQ6 29410130
    450676 6cfl:13 (2.6) BS04 MG ? GO:0003735 ... Q5SHQ6 29410130
    450677 6cfl:14 (2.6) BS01 rna ? GO:0003735 ... Q5SJE1 29410130
    450678 6cfl:14 (2.6) BS02 ZN ? GO:0003735 ... Q5SJE1 29410130
    450679 6cfl:15 (2.6) BS01 rna ? GO:0003735 ... P80339 29410130
    450680 6cfl:15 (2.6) BS02 MG ? GO:0003735 ... P80339 29410130
    450681 6cfl:15 (2.6) BS03 ZN ? GO:0003735 ... P80339 29410130
    450682 6cfl:16 (2.6) BS01 rna ? GO:0000049 ... P35871 29410130
    450683 6cfl:16 (2.6) BS02 ZN ? GO:0000049 ... P35871 29410130
    450684 6cfl:17 (2.6) BS01 rna ? GO:0003735 ... P80340 29410130
    450685 6cfl:17 (2.6) BS02 MG ? GO:0003735 ... P80340 29410130
    450686 6cfl:17 (2.6) BS03 MG ? GO:0003735 ... P80340 29410130
    450687 6cfl:17 (2.6) BS04 MG ? GO:0003735 ... P80340 29410130
    450688 6cfl:18 (2.6) BS01 rna ? GO:0003735 ... Q5SKU1 29410130
    450689 6cfl:18 (2.6) BS02 MG ? GO:0003735 ... Q5SKU1 29410130
    450690 6cfl:18 (2.6) BS03 MG ? GO:0003735 ... Q5SKU1 29410130
    450691 6cfl:19 (2.6) BS01 rna ? GO:0003735 ... Q5SHR2 29410130
    450692 6cfl:19 (2.6) BS02 ZN ? GO:0003735 ... Q5SHR2 29410130
    450693 6cfl:1D (2.6) BS01 rna ? GO:0002181 ... P60405 29410130
    450694 6cfl:1D (2.6) BS02 MG ? GO:0002181 ... P60405 29410130
    450695 6cfl:1D (2.6) BS03 MG ? GO:0002181 ... P60405 29410130
    450696 6cfl:1D (2.6) BS04 MG ? GO:0002181 ... P60405 29410130
    450697 6cfl:1D (2.6) BS05 MG ? GO:0002181 ... P60405 29410130
    450698 6cfl:1D (2.6) BS06 MG ? GO:0002181 ... P60405 29410130
    450699 6cfl:1D (2.6) BS07 MG ? GO:0002181 ... P60405 29410130
    450700 6cfl:1E (2.6) BS01 rna ? GO:0003735 ... Q5SHN8 29410130
    450701 6cfl:1E (2.6) BS02 MG ? GO:0003735 ... Q5SHN8 29410130
    450702 6cfl:1E (2.6) BS03 MG ? GO:0003735 ... Q5SHN8 29410130
    450703 6cfl:1E (2.6) BS04 MG ? GO:0003735 ... Q5SHN8 29410130
    450704 6cfl:1F (2.6) BS01 rna ? GO:0003735 ... Q5SHN9 29410130
    450705 6cfl:1F (2.6) BS02 MG ? GO:0003735 ... Q5SHN9 29410130
    450706 6cfl:1F (2.6) BS03 MG ? GO:0003735 ... Q5SHN9 29410130
    450707 6cfl:1F (2.6) BS04 MG ? GO:0003735 ... Q5SHN9 29410130
    450708 6cfl:1F (2.6) BS05 MG ? GO:0003735 ... Q5SHN9 29410130
    450709 6cfl:1F (2.6) BS06 MG ? GO:0003735 ... Q5SHN9 29410130
    450710 6cfl:1F (2.6) BS07 MG ? GO:0003735 ... Q5SHN9 29410130
    450711 6cfl:1F (2.6) BS08 MG ? GO:0003735 ... Q5SHN9 29410130
    450712 6cfl:1F (2.6) BS09 MG ? GO:0003735 ... Q5SHN9 29410130
    450713 6cfl:1F (2.6) BS10 MG ? GO:0003735 ... Q5SHN9 29410130
    450714 6cfl:1F (2.6) BS11 MG ? GO:0003735 ... Q5SHN9 29410130
    450715 6cfl:1F (2.6) BS12 MG ? GO:0003735 ... Q5SHN9 29410130
    450716 6cfl:1F (2.6) BS13 MG ? GO:0003735 ... Q5SHN9 29410130
    450717 6cfl:1F (2.6) BS14 ARG ? GO:0003735 ... Q5SHN9 29410130
    450718 6cfl:1G (2.6) BS01 rna ? GO:0000049 ... Q5SHQ0 29410130
    450719 6cfl:1G (2.6) BS02 rna ? GO:0000049 ... Q5SHQ0 29410130
    450720 6cfl:1G (2.6) BS03 MG ? GO:0000049 ... Q5SHQ0 29410130
    450721 6cfl:1G (2.6) BS04 MG ? GO:0000049 ... Q5SHQ0 29410130
    450722 6cfl:1H (2.6) BS01 rna ? GO:0002181 ... P0DOY8 29410130
    450723 6cfl:1I (2.6) BS01 rna ? GO:0003735 ... Q5SLQ1 29410130
    450724 6cfl:1N (2.6) BS01 rna ? GO:0003729 ... P60488 29410130
    450725 6cfl:1N (2.6) BS02 MG ? GO:0003729 ... P60488 29410130
    450726 6cfl:1N (2.6) BS03 MG ? GO:0003729 ... P60488 29410130
    450727 6cfl:1O (2.6) BS01 rna ? GO:0003735 ... Q5SHP8 29410130
    450728 6cfl:1O (2.6) BS02 rna ? GO:0003735 ... Q5SHP8 29410130
    450729 6cfl:1P (2.6) BS01 rna ? GO:0003735 ... Q5SHQ7 29410130
    450730 6cfl:1P (2.6) BS02 MG ? GO:0003735 ... Q5SHQ7 29410130
    450731 6cfl:1P (2.6) BS03 MG ? GO:0003735 ... Q5SHQ7 29410130
    450732 6cfl:1Q (2.6) BS01 rna ? GO:0000049 ... P60489 29410130
    450733 6cfl:1Q (2.6) BS02 rna ? GO:0000049 ... P60489 29410130
    450734 6cfl:1Q (2.6) BS03 MG ? GO:0000049 ... P60489 29410130
    450735 6cfl:1Q (2.6) BS04 MG ? GO:0000049 ... P60489 29410130
    450736 6cfl:1R (2.6) BS01 rna ? GO:0003735 ... Q9Z9H5 29410130
    450737 6cfl:1R (2.6) BS02 MG ? GO:0003735 ... Q9Z9H5 29410130
    450738 6cfl:1R (2.6) BS03 MG ? GO:0003735 ... Q9Z9H5 29410130
    450739 6cfl:1R (2.6) BS04 MG ? GO:0003735 ... Q9Z9H5 29410130
    450740 6cfl:1S (2.6) BS01 rna ? GO:0003735 ... Q5SHQ4 29410130
    450741 6cfl:1S (2.6) BS02 rna ? GO:0003735 ... Q5SHQ4 29410130
    450742 6cfl:1T (2.6) BS01 rna ? GO:0003735 ... P60490 29410130
    450743 6cfl:1T (2.6) BS02 rna ? GO:0003735 ... P60490 29410130
    450744 6cfl:1U (2.6) BS01 rna ? GO:0000027 ... P60491 29410130
    450745 6cfl:1U (2.6) BS02 MG ? GO:0000027 ... P60491 29410130
    450746 6cfl:1U (2.6) BS03 MG ? GO:0000027 ... P60491 29410130
    450747 6cfl:1U (2.6) BS04 MG ? GO:0000027 ... P60491 29410130
    450748 6cfl:1U (2.6) BS05 MG ? GO:0000027 ... P60491 29410130
    450749 6cfl:1U (2.6) BS06 MG ? GO:0000027 ... P60491 29410130
    450750 6cfl:1V (2.6) BS01 rna ? GO:0003723 ... P60492 29410130
    450751 6cfl:1V (2.6) BS02 MG ? GO:0003723 ... P60492 29410130
    450752 6cfl:1V (2.6) BS03 MG ? GO:0003723 ... P60492 29410130
    450753 6cfl:1V (2.6) BS04 MG ? GO:0003723 ... P60492 29410130
    450754 6cfl:1W (2.6) BS01 rna ? GO:0003735 ... Q5SHP3 29410130
    450755 6cfl:1W (2.6) BS02 MG ? GO:0003735 ... Q5SHP3 29410130
    450756 6cfl:1X (2.6) BS01 rna ? GO:0003735 ... Q5SHP0 29410130
    450757 6cfl:1Y (2.6) BS01 rna ? GO:0003723 ... Q5SHP9 29410130
    450758 6cfl:1Y (2.6) BS02 ZN ? GO:0003723 ... Q5SHP9 29410130
    450759 6cfl:1Z (2.6) BS01 rna ? GO:0003723 ... Q5SHZ1 29410130
    450760 6cfl:1Z (2.6) BS02 rna ? GO:0003723 ... Q5SHZ1 29410130
    450761 6cfl:1b (2.6) BS01 rna ? GO:0003735 ... P80371 29410130
    450762 6cfl:1c (2.6) BS01 rna ? GO:0003676 ... P80372 29410130
    450763 6cfl:1d (2.6) BS01 rna ? GO:0003723 ... P80373 29410130
    450764 6cfl:1d (2.6) BS02 SF4 ? GO:0003723 ... P80373 29410130
    450765 6cfl:1e (2.6) BS01 rna ? GO:0003723 ... Q5SHQ5 29410130
    450766 6cfl:1e (2.6) BS02 MG ? GO:0003723 ... Q5SHQ5 29410130
    450767 6cfl:1f (2.6) BS01 rna ? GO:0003735 ... Q5SLP8 29410130
    450768 6cfl:1g (2.6) BS01 rna ? GO:0000049 ... P17291 29410130
    450769 6cfl:1h (2.6) BS01 rna ? GO:0003735 ... P0DOY9 29410130
    450770 6cfl:1i (2.6) BS01 rna ? GO:0000049 ... P80374 29410130
    450771 6cfl:1j (2.6) BS01 rna ? GO:0000049 ... Q5SHN7 29410130
    450772 6cfl:1k (2.6) BS01 rna ? GO:0003735 ... P80376 29410130
    450773 6cfl:1k (2.6) BS02 MG ? GO:0003735 ... P80376 29410130
    450774 6cfl:1l (2.6) BS01 rna ? GO:0000049 ... Q5SHN3 29410130
    450775 6cfl:1l (2.6) BS02 MG ? GO:0000049 ... Q5SHN3 29410130
    450776 6cfl:1m (2.6) BS01 rna ? GO:0000049 ... P80377 29410130
    450777 6cfl:1m (2.6) BS02 MG ? GO:0000049 ... P80377 29410130
    450778 6cfl:1n (2.6) BS01 rna ? GO:0003735 ... P0DOY6 29410130
    450779 6cfl:1n (2.6) BS02 ZN ? GO:0003735 ... P0DOY6 29410130
    450780 6cfl:1n (2.6) BS03 MG ? GO:0003735 ... P0DOY6 29410130
    450781 6cfl:1o (2.6) BS01 rna ? GO:0003735 ... Q5SJ76 29410130
    450782 6cfl:1o (2.6) BS02 rna ? GO:0003735 ... Q5SJ76 29410130
    450783 6cfl:1p (2.6) BS01 rna ? GO:0003735 ... Q5SJH3 29410130
    450784 6cfl:1q (2.6) BS01 rna ? GO:0003735 ... P0DOY7 29410130
    450785 6cfl:1r (2.6) BS01 rna ? GO:0003735 ... Q5SLQ0 29410130
    450786 6cfl:1s (2.6) BS01 rna ? GO:0000028 ... Q5SHP2 29410130
    450787 6cfl:1t (2.6) BS01 rna ? GO:0003723 ... P80380 29410130
    450788 6cfl:1t (2.6) BS02 MG ? GO:0003723 ... P80380 29410130
    450789 6cfl:1y (2.6) BS01 rna ? GO:0005515 ... P0AD49 29410130
    450790 6cfl:1y (2.6) BS02 MG ? GO:0005515 ... P0AD49 29410130
    450791 6cfl:1y (2.6) BS03 MG ? GO:0005515 ... P0AD49 29410130
    450792 6cfl:20 (2.6) BS01 rna ? GO:0003735 ... P60493 29410130
    450793 6cfl:20 (2.6) BS02 rna ? GO:0003735 ... P60493 29410130
    450794 6cfl:20 (2.6) BS03 MG ? GO:0003735 ... P60493 29410130
    450795 6cfl:21 (2.6) BS01 rna ? GO:0003735 ... P60494 29410130
    450796 6cfl:22 (2.6) BS01 rna ? GO:0003735 ... Q5SHP6 29410130
    450797 6cfl:23 (2.6) BS01 rna ? GO:0003735 ... Q5SHQ6 29410130
    450798 6cfl:23 (2.6) BS02 rna ? GO:0003735 ... Q5SHQ6 29410130
    450799 6cfl:23 (2.6) BS03 MG ? GO:0003735 ... Q5SHQ6 29410130
    450800 6cfl:24 (2.6) BS01 rna ? GO:0003735 ... Q5SJE1 29410130

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).