SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    45201 1qn9:B (1.9) BS01 dna ? GO:0003677 ... P28147 10617571
    45202 1qn9:B (1.9) BS02 dna ? GO:0003677 ... P28147 10617571
    45203 1qna:A (1.8) BS01 dna ? GO:0003677 ... P28147 10617571
    45204 1qna:A (1.8) BS02 dna ? GO:0003677 ... P28147 10617571
    45205 1qna:B (1.8) BS01 dna ? GO:0003677 ... P28147 10617571
    45206 1qna:B (1.8) BS02 dna ? GO:0003677 ... P28147 10617571
    45207 1qnb:A (2.23) BS01 dna ? GO:0003677 ... P28147 10617571
    45208 1qnb:A (2.23) BS02 dna ? GO:0003677 ... P28147 10617571
    45209 1qnb:B (2.23) BS01 dna ? GO:0003677 ... P28147 10617571
    45210 1qnb:B (2.23) BS02 dna ? GO:0003677 ... P28147 10617571
    45211 1qnc:A (2.3) BS01 dna ? GO:0003677 ... P28147 10617571
    45212 1qnc:A (2.3) BS02 dna ? GO:0003677 ... P28147 10617571
    45213 1qnc:B (2.3) BS01 dna ? GO:0003677 ... P28147 10617571
    45214 1qnc:B (2.3) BS02 dna ? GO:0003677 ... P28147 10617571
    45215 1qne:A (1.9) BS01 dna ? GO:0003677 ... P28147 10617571
    45216 1qne:A (1.9) BS02 dna ? GO:0003677 ... P28147 10617571
    45217 1qne:B (1.9) BS01 dna ? GO:0003677 ... P28147 10617571
    45218 1qne:B (1.9) BS02 dna ? GO:0003677 ... P28147 10617571
    45219 1qnf:A (1.8) BS01 FAD 4.1.99.3 GO:0003677 ... P05327 9360600
    45220 1qnf:A (1.8) BS02 HDF 4.1.99.3 GO:0003677 ... P05327 9360600
    45221 1qng:A (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... Q25756 10756109
    45222 1qnh:A (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... Q25756 10756109
    45223 1qnh:B (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... Q25756 10756109
    45224 1qni:A (2.4) BS01 CUA ? GO:0004129 ... Q7SIA3 10700275
    45225 1qni:A (2.4) BS02 CA ? GO:0004129 ... Q7SIA3 10700275
    45226 1qni:A (2.4) BS03 CA ? GO:0004129 ... Q7SIA3 10700275
    45227 1qni:B (2.4) BS01 CUA ? GO:0004129 ... Q7SIA3 10700275
    45228 1qni:B (2.4) BS02 CA ? GO:0004129 ... Q7SIA3 10700275
    45229 1qni:B (2.4) BS03 CA ? GO:0004129 ... Q7SIA3 10700275
    45230 1qni:C (2.4) BS01 CUA ? GO:0004129 ... Q7SIA3 10700275
    45231 1qni:C (2.4) BS02 CA ? GO:0004129 ... Q7SIA3 10700275
    45232 1qni:C (2.4) BS03 CA ? GO:0004129 ... Q7SIA3 10700275
    45233 1qni:D (2.4) BS01 CUA ? GO:0004129 ... Q7SIA3 10700275
    45234 1qni:D (2.4) BS02 CA ? GO:0004129 ... Q7SIA3 10700275
    45235 1qni:D (2.4) BS03 CA ? GO:0004129 ... Q7SIA3 10700275
    45236 1qni:E (2.4) BS01 CUA ? GO:0004129 ... Q7SIA3 10700275
    45237 1qni:E (2.4) BS02 CA ? GO:0004129 ... Q7SIA3 10700275
    45238 1qni:E (2.4) BS03 CA ? GO:0004129 ... Q7SIA3 10700275
    45239 1qni:F (2.4) BS01 CUA ? GO:0004129 ... Q7SIA3 10700275
    45240 1qni:F (2.4) BS02 CA ? GO:0004129 ... Q7SIA3 10700275
    45241 1qni:F (2.4) BS03 CA ? GO:0004129 ... Q7SIA3 10700275
    45242 1qnl:A (2.7) BS01 BMD ? GO:0006865 ... P27017 10708652
    45243 1qnm:A (2.3) BS01 MN 1.15.1.1 GO:0004784 ... P04179 9537988
    45244 1qnm:B (2.3) BS01 MN 1.15.1.1 GO:0004784 ... P04179 9537988
    45245 1qnn:A (1.8) BS01 FE 1.15.1.1 GO:0004784 ... P19665 10848964
    45246 1qnn:B (1.8) BS01 FE 1.15.1.1 GO:0004784 ... P19665 10848964
    45247 1qnn:C (1.8) BS01 FE 1.15.1.1 GO:0004784 ... P19665 10848964
    45248 1qnn:D (1.8) BS01 FE 1.15.1.1 GO:0004784 ... P19665 10848964
    45249 1qnq:A (1.65) BS01 TPT 3.2.1.78 GO:0000272 ... Q99036 10666621
    45250 1qnq:A (1.65) BS02 TPT 3.2.1.78 GO:0000272 ... Q99036 10666621
    45251 1qnr:A (1.4) BS01 BMA 3.2.1.78 GO:0000272 ... Q99036 10666621
    45252 1qnr:A (1.4) BS02 BMA 3.2.1.78 GO:0000272 ... Q99036 10666621
    45253 1qnu:A (2.23) BS01 GAL ? GO:0005576 ... V5URS0 10688205
    45254 1qnu:A (2.23) BS02 GAL ? GO:0005576 ... V5URS0 10688205
    45255 1qnu:B (2.23) BS01 GAL ? GO:0005576 ... V5URS0 10688205
    45256 1qnu:B (2.23) BS02 GAL ? GO:0005576 ... V5URS0 10688205
    45257 1qnu:C (2.23) BS01 GAL ? GO:0005576 ... V5URS0 10688205
    45258 1qnu:C (2.23) BS02 GAL ? GO:0005576 ... V5URS0 10688205
    45259 1qnu:D (2.23) BS01 GAL ? GO:0005576 ... V5URS0 10688205
    45260 1qnu:D (2.23) BS02 GAL ? GO:0005576 ... V5URS0 10688205
    45261 1qnu:E (2.23) BS01 GAL ? GO:0005576 ... V5URS0 10688205
    45262 1qnu:E (2.23) BS02 GAL ? GO:0005576 ... V5URS0 10688205
    45263 1qnv:A (2.5) BS01 PB 4.2.1.24 GO:0004655 ... P05373 10739915
    45264 1qnw:A (2.35) BS01 MN ? GO:0030246 ... P22973 10966800
    45265 1qnw:A (2.35) BS02 CA ? GO:0030246 ... P22973 10966800
    45266 1qnw:B (2.35) BS01 MN ? GO:0030246 ... P22973 10966800
    45267 1qnw:B (2.35) BS02 CA ? GO:0030246 ... P22973 10966800
    45268 1qnw:C (2.35) BS01 MN ? GO:0030246 ... P22973 10966800
    45269 1qnw:C (2.35) BS02 CA ? GO:0030246 ... P22973 10966800
    45270 1qnw:D (2.35) BS01 MN ? GO:0030246 ... P22973 10966800
    45271 1qnw:D (2.35) BS02 CA ? GO:0030246 ... P22973 10966800
    45272 1qny:A (1.8) BS01 MN ? GO:0030246 ... P02866 10771422
    45273 1qny:A (1.8) BS02 CA ? GO:0030246 ... P02866 10771422
    45274 1qnz:H (-1.00) BS01 peptide ? GO:0003823 ... P01750 10801487
    45275 1qnz:L (-1.00) BS01 peptide ? GO:0005576 ... P01665 10801487
    45276 1qo0:A (2.25) BS01 BMD ? GO:0006865 ... P27017 10508151
    45277 1qo0:B (2.25) BS01 BMD ? GO:0006865 ... P27017 10508151
    45278 1qo3:A (2.3) BS01 peptide ? N/A P01900 10604468
    45279 1qo4:A (3.0) BS01 HEM 1.11.1.7 GO:0002215 ... Q42578 11551197
    45280 1qo4:A (3.0) BS02 CA 1.11.1.7 GO:0002215 ... Q42578 11551197
    45281 1qo4:A (3.0) BS03 CA 1.11.1.7 GO:0002215 ... Q42578 11551197
    45282 1qo8:A (2.15) BS01 HEM 1.3.2.- GO:0010181 ... Q9Z4P0 10581549
    45283 1qo8:A (2.15) BS02 HEM 1.3.2.- GO:0010181 ... Q9Z4P0 10581549
    45284 1qo8:A (2.15) BS03 HEM 1.3.2.- GO:0010181 ... Q9Z4P0 10581549
    45285 1qo8:A (2.15) BS04 HEM 1.3.2.- GO:0010181 ... Q9Z4P0 10581549
    45286 1qo8:A (2.15) BS05 FAD 1.3.2.- GO:0010181 ... Q9Z4P0 10581549
    45287 1qo8:D (2.15) BS01 HEM 1.3.2.- GO:0010181 ... Q9Z4P0 10581549
    45288 1qo8:D (2.15) BS02 HEM 1.3.2.- GO:0010181 ... Q9Z4P0 10581549
    45289 1qo8:D (2.15) BS03 HEM 1.3.2.- GO:0010181 ... Q9Z4P0 10581549
    45290 1qo8:D (2.15) BS04 HEM 1.3.2.- GO:0010181 ... Q9Z4P0 10581549
    45291 1qo8:D (2.15) BS05 FAD 1.3.2.- GO:0010181 ... Q9Z4P0 10581549
    45292 1qoa:A (1.7) BS01 FES ? GO:0009055 ... P0A3C7 9398238
    45293 1qoa:B (1.7) BS01 FES ? GO:0009055 ... P0A3C7 9398238
    45294 1qob:A (1.8) BS01 FES ? GO:0009055 ... P0A3C7 9287153
    45295 1qob:B (1.8) BS01 FES ? GO:0009055 ... P0A3C7 9287153
    45296 1qof:A (1.8) BS01 FES ? GO:0009055 ... P0A3C7 9287153
    45297 1qof:B (1.8) BS01 FES ? GO:0009055 ... P0A3C7 9287153
    45298 1qog:A (1.8) BS01 FES ? GO:0009055 ... P0A3C7 9287153
    45299 1qog:B (1.8) BS01 FES ? GO:0009055 ... P0A3C7 9287153
    45300 1qom:A (2.7) BS01 HEM 1.14.13.39 GO:0004517 ... P29477 10562539
    45301 1qom:A (2.7) BS02 H4B 1.14.13.39 GO:0004517 ... P29477 10562539
    45302 1qom:B (2.7) BS01 HEM 1.14.13.39 GO:0004517 ... P29477 10562539
    45303 1qom:B (2.7) BS02 H4B 1.14.13.39 GO:0004517 ... P29477 10562539
    45304 1qoo:A (2.75) BS01 MN ? GO:0030246 ... Q9FVF8 10966800
    45305 1qoo:A (2.75) BS02 CA ? GO:0030246 ... Q9FVF8 10966800
    45306 1qoo:B (2.75) BS01 MN ? GO:0030246 ... Q9FVF8 10966800
    45307 1qoo:B (2.75) BS02 CA ? GO:0030246 ... Q9FVF8 10966800
    45308 1qoo:C (2.75) BS01 MN ? GO:0030246 ... Q9FVF8 10966800
    45309 1qoo:C (2.75) BS02 CA ? GO:0030246 ... Q9FVF8 10966800
    45310 1qoo:D (2.75) BS01 MN ? GO:0030246 ... Q9FVF8 10966800
    45311 1qoo:D (2.75) BS02 CA ? GO:0030246 ... Q9FVF8 10966800
    45312 1qop:B (1.4) BS01 PLP 4.2.1.20 GO:0000162 ... P0A2K1 10600108
    45313 1qop:B (1.4) BS02 NA 4.2.1.20 GO:0000162 ... P0A2K1 10600108
    45314 1qoq:A (1.8) BS01 IGP 4.2.1.20 GO:0000162 ... P00929 10600108
    45315 1qoq:B (1.8) BS01 PLP 4.2.1.20 GO:0000162 ... P0A2K1 10600108
    45316 1qor:A (2.2) BS01 NDP 1.6.5.5 GO:0003960 ... P28304 7602590
    45317 1qor:B (2.2) BS01 NDP 1.6.5.5 GO:0003960 ... P28304 7602590
    45318 1qos:A (2.95) BS01 MN ? GO:0030246 ... Q9FVF8 10966800
    45319 1qos:A (2.95) BS02 CA ? GO:0030246 ... Q9FVF8 10966800
    45320 1qos:B (2.95) BS01 MN ? GO:0030246 ... Q9FVF8 10966800
    45321 1qos:B (2.95) BS02 CA ? GO:0030246 ... Q9FVF8 10966800
    45322 1qot:A (3.0) BS01 GAL ? GO:0030246 ... Q9FVF8 10966800
    45323 1qot:A (3.0) BS02 FUC ? GO:0030246 ... Q9FVF8 10966800
    45324 1qot:A (3.0) BS03 MN ? GO:0030246 ... Q9FVF8 10966800
    45325 1qot:A (3.0) BS04 CA ? GO:0030246 ... Q9FVF8 10966800
    45326 1qot:B (3.0) BS01 GAL ? GO:0030246 ... Q9FVF8 10966800
    45327 1qot:B (3.0) BS02 FUC ? GO:0030246 ... Q9FVF8 10966800
    45328 1qot:B (3.0) BS03 MN ? GO:0030246 ... Q9FVF8 10966800
    45329 1qot:B (3.0) BS04 CA ? GO:0030246 ... Q9FVF8 10966800
    45330 1qot:C (3.0) BS01 GAL ? GO:0030246 ... Q9FVF8 10966800
    45331 1qot:C (3.0) BS02 FUC ? GO:0030246 ... Q9FVF8 10966800
    45332 1qot:C (3.0) BS03 MN ? GO:0030246 ... Q9FVF8 10966800
    45333 1qot:C (3.0) BS04 CA ? GO:0030246 ... Q9FVF8 10966800
    45334 1qot:D (3.0) BS01 GAL ? GO:0030246 ... Q9FVF8 10966800
    45335 1qot:D (3.0) BS02 FUC ? GO:0030246 ... Q9FVF8 10966800
    45336 1qot:D (3.0) BS03 MN ? GO:0030246 ... Q9FVF8 10966800
    45337 1qot:D (3.0) BS04 CA ? GO:0030246 ... Q9FVF8 10966800
    45338 1qov:H (2.1) BS01 CDL ? GO:0019684 ... P0C0Y7 10611277
    45339 1qov:L (2.1) BS01 BCL ? GO:0009772 ... P0C0Y8 10611277
    45340 1qov:L (2.1) BS02 BCL ? GO:0009772 ... P0C0Y8 10611277
    45341 1qov:L (2.1) BS03 U10 ? GO:0009772 ... P0C0Y8 10611277
    45342 1qov:L (2.1) BS04 BCL ? GO:0009772 ... P0C0Y8 10611277
    45343 1qov:L (2.1) BS05 BPH ? GO:0009772 ... P0C0Y8 10611277
    45344 1qov:L (2.1) BS06 BPH ? GO:0009772 ... P0C0Y8 10611277
    45345 1qov:L (2.1) BS07 FE2 ? GO:0009772 ... P0C0Y8 10611277
    45346 1qov:M (2.1) BS01 BCL ? GO:0009772 ... P0C0Y9 10611277
    45347 1qov:M (2.1) BS02 BCL ? GO:0009772 ... P0C0Y9 10611277
    45348 1qov:M (2.1) BS03 BCL ? GO:0009772 ... P0C0Y9 10611277
    45349 1qov:M (2.1) BS04 BPH ? GO:0009772 ... P0C0Y9 10611277
    45350 1qov:M (2.1) BS05 BPH ? GO:0009772 ... P0C0Y9 10611277
    45351 1qov:M (2.1) BS06 FE2 ? GO:0009772 ... P0C0Y9 10611277
    45352 1qov:M (2.1) BS07 SPN ? GO:0009772 ... P0C0Y9 10611277
    45353 1qov:M (2.1) BS08 CDL ? GO:0009772 ... P0C0Y9 10611277
    45354 1qp0:A (2.9) BS01 dna ? GO:0000976 ... P0ACP7 10438625
    45355 1qp0:A (2.9) BS02 HPA ? GO:0000976 ... P0ACP7 10438625
    45356 1qp4:A (3.0) BS01 dna ? GO:0000976 ... P0ACP7 10438625
    45357 1qp4:A (3.0) BS02 HPA ? GO:0000976 ... P0ACP7 10438625
    45358 1qp7:A (2.9) BS01 dna ? GO:0000976 ... P0ACP7 10438625
    45359 1qp7:A (2.9) BS02 HPA ? GO:0000976 ... P0ACP7 10438625
    45360 1qp8:A (2.8) BS01 NDP ? GO:0005829 ... Q8ZXP5 N/A
    45361 1qp8:B (2.8) BS01 NDP ? GO:0005829 ... Q8ZXP5 N/A
    45362 1qp9:A (2.8) BS01 dna ? GO:0000981 ... P0CS82 11024163
    45363 1qp9:A (2.8) BS02 dna ? GO:0000981 ... P0CS82 11024163
    45364 1qp9:A (2.8) BS03 ZN ? GO:0000981 ... P0CS82 11024163
    45365 1qp9:A (2.8) BS04 ZN ? GO:0000981 ... P0CS82 11024163
    45366 1qp9:B (2.8) BS01 dna ? GO:0000981 ... P0CS82 11024163
    45367 1qp9:B (2.8) BS02 dna ? GO:0000981 ... P0CS82 11024163
    45368 1qp9:B (2.8) BS03 ZN ? GO:0000981 ... P0CS82 11024163
    45369 1qp9:B (2.8) BS04 ZN ? GO:0000981 ... P0CS82 11024163
    45370 1qp9:B (2.8) BS05 ZN ? GO:0000981 ... P0CS82 11024163
    45371 1qp9:C (2.8) BS01 dna ? GO:0000981 ... P0CS82 11024163
    45372 1qp9:C (2.8) BS02 dna ? GO:0000981 ... P0CS82 11024163
    45373 1qp9:C (2.8) BS03 ZN ? GO:0000981 ... P0CS82 11024163
    45374 1qp9:C (2.8) BS04 ZN ? GO:0000981 ... P0CS82 11024163
    45375 1qp9:D (2.8) BS01 dna ? GO:0000981 ... P0CS82 11024163
    45376 1qp9:D (2.8) BS02 dna ? GO:0000981 ... P0CS82 11024163
    45377 1qp9:D (2.8) BS03 ZN ? GO:0000981 ... P0CS82 11024163
    45378 1qp9:D (2.8) BS04 ZN ? GO:0000981 ... P0CS82 11024163
    45379 1qp9:D (2.8) BS05 ZN ? GO:0000981 ... P0CS82 11024163
    45380 1qpa:A (1.8) BS01 MAN 1.11.1.14 GO:0000302 ... P11542 10024453
    45381 1qpa:A (1.8) BS02 MAN 1.11.1.14 GO:0000302 ... P11542 10024453
    45382 1qpa:A (1.8) BS03 CA 1.11.1.14 GO:0000302 ... P11542 10024453
    45383 1qpa:A (1.8) BS04 CA 1.11.1.14 GO:0000302 ... P11542 10024453
    45384 1qpa:A (1.8) BS05 HEM 1.11.1.14 GO:0000302 ... P11542 10024453
    45385 1qpa:B (1.8) BS01 FUC 1.11.1.14 GO:0000302 ... P11542 10024453
    45386 1qpa:B (1.8) BS02 MAN 1.11.1.14 GO:0000302 ... P11542 10024453
    45387 1qpa:B (1.8) BS03 MAN 1.11.1.14 GO:0000302 ... P11542 10024453
    45388 1qpa:B (1.8) BS04 MAN 1.11.1.14 GO:0000302 ... P11542 10024453
    45389 1qpa:B (1.8) BS05 MAN 1.11.1.14 GO:0000302 ... P11542 10024453
    45390 1qpa:B (1.8) BS06 CA 1.11.1.14 GO:0000302 ... P11542 10024453
    45391 1qpa:B (1.8) BS07 CA 1.11.1.14 GO:0000302 ... P11542 10024453
    45392 1qpa:B (1.8) BS08 HEM 1.11.1.14 GO:0000302 ... P11542 10024453
    45393 1qpb:A (2.4) BS01 TPP 4.1.1.-
    4.1.1.43
    4.1.1.72
    4.1.1.74
    GO:0000287 ... P06169 10651824
    45394 1qpb:A (2.4) BS02 MG 4.1.1.-
    4.1.1.43
    4.1.1.72
    4.1.1.74
    GO:0000287 ... P06169 10651824
    45395 1qpb:A (2.4) BS03 PYM 4.1.1.-
    4.1.1.43
    4.1.1.72
    4.1.1.74
    GO:0000287 ... P06169 10651824 MOAD: Kd=44mM
    45396 1qpb:A (2.4) BS04 TPP 4.1.1.-
    4.1.1.43
    4.1.1.72
    4.1.1.74
    GO:0000287 ... P06169 10651824
    45397 1qpb:B (2.4) BS01 TPP 4.1.1.-
    4.1.1.43
    4.1.1.72
    4.1.1.74
    GO:0000287 ... P06169 10651824
    45398 1qpb:B (2.4) BS02 TPP 4.1.1.-
    4.1.1.43
    4.1.1.72
    4.1.1.74
    GO:0000287 ... P06169 10651824
    45399 1qpb:B (2.4) BS03 MG 4.1.1.-
    4.1.1.43
    4.1.1.72
    4.1.1.74
    GO:0000287 ... P06169 10651824
    45400 1qpb:B (2.4) BS04 PYM 4.1.1.-
    4.1.1.43
    4.1.1.72
    4.1.1.74
    GO:0000287 ... P06169 10651824 MOAD: Kd=44mM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).