SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    454401 6d9e:A (2.85) BS02 UD1 N/A GO:0008767 ... N/A N/A
    454402 6d9f:A (2.03) BS01 FE ? GO:0016491 ... E4N6B3 32935984
    454403 6d9f:A (2.03) BS02 FE ? GO:0016491 ... E4N6B3 32935984
    454404 6d9f:B (2.03) BS01 FE ? GO:0016491 ... E4N6B3 32935984
    454405 6d9f:B (2.03) BS02 FE ? GO:0016491 ... E4N6B3 32935984
    454406 6d9h:R (3.6) BS01 ADN ? GO:0001609 ... P08173
    P30542
    29925945
    454407 6d9j:9 (3.2) BS01 rna 3.6.5.- GO:0002244 ... P13639 29856316
    454408 6d9j:9 (3.2) BS02 rna 3.6.5.- GO:0002244 ... P13639 29856316
    454409 6d9j:9 (3.2) BS03 rna 3.6.5.- GO:0002244 ... P13639 29856316
    454410 6d9j:A (3.2) BS01 rna ? GO:0002181 ... G1TT27 29856316
    454411 6d9j:A (3.2) BS02 rna ? GO:0002181 ... G1TT27 29856316
    454412 6d9j:B (3.2) BS01 rna ? GO:0003723 ... G1TL06 29856316
    454413 6d9j:BB (3.2) BS01 rna N/A GO:0003735 ... N/A 29856316
    454414 6d9j:C (3.2) BS01 rna ? GO:0003735 ... G1SVW5 29856316
    454415 6d9j:C (3.2) BS02 rna ? GO:0003735 ... G1SVW5 29856316
    454416 6d9j:CC (3.2) BS01 rna ? GO:0003735 ... G1SS70 29856316
    454417 6d9j:CC (3.2) BS02 rna ? GO:0003735 ... G1SS70 29856316
    454418 6d9j:D (3.2) BS01 rna ? GO:0000027 ... P19949 29856316
    454419 6d9j:D (3.2) BS02 rna ? GO:0000027 ... P19949 29856316
    454420 6d9j:DD (3.2) BS01 rna N/A GO:0003723 ... N/A 29856316
    454421 6d9j:E (3.2) BS01 rna ? GO:0000027 ... G1SKF7 29856316
    454422 6d9j:EE (3.2) BS01 rna 4.2.99.18 GO:0003677 ... G1TNM3 29856316
    454423 6d9j:F (3.2) BS01 rna ? GO:0000463 ... G1SV32 29856316
    454424 6d9j:F (3.2) BS02 rna ? GO:0000463 ... G1SV32 29856316
    454425 6d9j:FF (3.2) BS01 rna N/A GO:0003723 ... N/A 29856316
    454426 6d9j:G (3.2) BS01 rna ? GO:0003723 ... G1STW0 29856316
    454427 6d9j:G (3.2) BS02 rna ? GO:0003723 ... G1STW0 29856316
    454428 6d9j:GG (3.2) BS01 rna ? GO:0003723 ... G1TFM5 29856316
    454429 6d9j:H (3.2) BS01 rna ? GO:0002181 ... G1SWI6 29856316
    454430 6d9j:HH (3.2) BS01 rna ? GO:0003735 ... G1TM55 29856316
    454431 6d9j:I (3.2) BS01 rna ? GO:0003735 ... B7NZQ2 29856316
    454432 6d9j:I (3.2) BS02 rna ? GO:0003735 ... B7NZQ2 29856316
    454433 6d9j:I (3.2) BS03 rna ? GO:0003735 ... B7NZQ2 29856316
    454434 6d9j:II (3.2) BS01 rna ? GO:0003735 ... G1SVB0 29856316
    454435 6d9j:J (3.2) BS01 rna ? GO:0003735 ... G1TUB8 29856316
    454436 6d9j:J (3.2) BS02 rna ? GO:0003735 ... G1TUB8 29856316
    454437 6d9j:J (3.2) BS03 rna ? GO:0003735 ... G1TUB8 29856316
    454438 6d9j:JJ (3.2) BS01 rna ? GO:0003735 ... G1TJW1 29856316
    454439 6d9j:K (3.2) BS01 rna ? GO:0003723 ... G1SKZ8 29856316
    454440 6d9j:K (3.2) BS02 rna ? GO:0003723 ... G1SKZ8 29856316
    454441 6d9j:KK (3.2) BS01 rna ? GO:0003723 ... B7NZS8 29856316
    454442 6d9j:L (3.2) BS01 rna N/A GO:0003735 ... N/A 29856316
    454443 6d9j:L (3.2) BS02 rna N/A GO:0003735 ... N/A 29856316
    454444 6d9j:LL (3.2) BS01 rna ? GO:0003723 ... G1U0Y5 29856316
    454445 6d9j:M (3.2) BS01 rna ? GO:0003723 ... G1SZ12 29856316
    454446 6d9j:MM (3.2) BS01 rna ? GO:0003735 ... G1TRM4 29856316
    454447 6d9j:N (3.2) BS01 rna ? GO:0002181 ... G1T0C1 29856316
    454448 6d9j:N (3.2) BS02 rna ? GO:0002181 ... G1T0C1 29856316
    454449 6d9j:NN (3.2) BS01 rna ? GO:0003735 ... G1SFR8 29856316
    454450 6d9j:O (3.2) BS01 rna N/A GO:0003735 ... N/A 29856316
    454451 6d9j:OO (3.2) BS01 rna ? GO:0003735 ... G1SP51 29856316
    454452 6d9j:OO (3.2) BS02 rna ? GO:0003735 ... G1SP51 29856316
    454453 6d9j:P (3.2) BS01 rna ? GO:0002181 ... A0AAG1VQ99 29856316
    454454 6d9j:P (3.2) BS02 rna ? GO:0002181 ... A0AAG1VQ99 29856316
    454455 6d9j:PP (3.2) BS01 rna ? GO:0003735 ... G1T1F0 29856316
    454456 6d9j:Q (3.2) BS01 rna N/A GO:0003735 ... N/A 29856316
    454457 6d9j:QQ (3.2) BS01 rna ? GO:0000028 ... G1U0Q2 29856316
    454458 6d9j:QQ (3.2) BS02 rna ? GO:0000028 ... G1U0Q2 29856316
    454459 6d9j:R (3.2) BS01 rna N/A GO:0003723 ... N/A 29856316
    454460 6d9j:R (3.2) BS02 rna N/A GO:0003723 ... N/A 29856316
    454461 6d9j:RR (3.2) BS01 rna ? GO:0000462 ... G1SGX4 29856316
    454462 6d9j:S (3.2) BS01 rna N/A GO:0003735 ... N/A 29856316
    454463 6d9j:S (3.2) BS02 rna N/A GO:0003735 ... N/A 29856316
    454464 6d9j:SS (3.2) BS01 rna ? GO:0003735 ... G1TU13 29856316
    454465 6d9j:T (3.2) BS01 rna ? GO:0003735 ... G1SHQ2 29856316
    454466 6d9j:T (3.2) BS02 rna ? GO:0003735 ... G1SHQ2 29856316
    454467 6d9j:TT (3.2) BS01 rna ? GO:0003676 ... G1TPG3 29856316
    454468 6d9j:U (3.2) BS01 rna N/A GO:0003735 ... N/A 29856316
    454469 6d9j:UU (3.2) BS01 rna ? GO:0000028 ... G1TN62 29856316
    454470 6d9j:V (3.2) BS01 rna ? GO:0003735 ... G1T6D1 29856316
    454471 6d9j:VV (3.2) BS01 rna ? GO:0003723 ... G1SIZ2 29856316
    454472 6d9j:W (3.2) BS01 rna ? GO:0000027 ... G1SE28 29856316
    454473 6d9j:W (3.2) BS02 rna ? GO:0000027 ... G1SE28 29856316
    454474 6d9j:X (3.2) BS01 rna ? GO:0003735 ... G1SE76 29856316
    454475 6d9j:X (3.2) BS02 rna ? GO:0003735 ... G1SE76 29856316
    454476 6d9j:XX (3.2) BS01 rna ? GO:0003735 ... G1TG89 29856316
    454477 6d9j:Y (3.2) BS01 rna ? GO:0003723 ... G1SQH0 29856316
    454478 6d9j:Y (3.2) BS02 rna ? GO:0003723 ... G1SQH0 29856316
    454479 6d9j:YY (3.2) BS01 rna ? GO:0003735 ... G1SZ47 29856316
    454480 6d9j:Z (3.2) BS01 rna ? GO:0003735 ... G1TXF6 29856316
    454481 6d9j:ZZ (3.2) BS01 rna ? GO:0003735 ... G1T3D8 29856316
    454482 6d9j:a (3.2) BS01 rna ? GO:0003735 ... G1SNY0 29856316
    454483 6d9j:aa (3.2) BS01 rna ? GO:0003735 ... G1TDB3 29856316
    454484 6d9j:b (3.2) BS01 rna ? GO:0002181 ... G1SGR6 29856316
    454485 6d9j:bb (3.2) BS01 rna N/A GO:0003735 ... N/A 29856316
    454486 6d9j:bb (3.2) BS02 ZN N/A GO:0003735 ... N/A 29856316
    454487 6d9j:c (3.2) BS01 rna ? GO:0002181 ... G1TDL2 29856316
    454488 6d9j:cc (3.2) BS01 rna ? GO:0003735 ... G1TZ76 29856316
    454489 6d9j:d (3.2) BS01 rna ? GO:0002181 ... G1SHG0 29856316
    454490 6d9j:dd (3.2) BS01 rna ? GO:0000028 ... G1TIB4 29856316
    454491 6d9j:e (3.2) BS01 rna ? GO:0003735 ... G1TUN8 29856316
    454492 6d9j:ee (3.2) BS01 rna N/A GO:0003735 ... N/A 29856316
    454493 6d9j:ee (3.2) BS02 ZN N/A GO:0003735 ... N/A 29856316
    454494 6d9j:f (3.2) BS01 rna ? GO:0000049 ... G1SF08 29856316
    454495 6d9j:ff (3.2) BS01 rna ? GO:0003735 ... G1T8A2 29856316
    454496 6d9j:g (3.2) BS01 rna ? GO:0003735 ... A0AAA9WXS4 29856316
    454497 6d9j:gg (3.2) BS01 rna ? GO:0003735 ... G1SK22 29856316
    454498 6d9j:gg (3.2) BS02 ZN ? GO:0003735 ... G1SK22 29856316
    454499 6d9j:h (3.2) BS01 rna ? GO:0000463 ... G1SIT5 29856316
    454500 6d9j:h (3.2) BS02 rna ? GO:0000463 ... G1SIT5 29856316
    454501 6d9j:hh (3.2) BS01 rna ? GO:0001891 ... G1SJB4 29856316
    454502 6d9j:i (3.2) BS01 rna ? GO:0003735 ... G1TTQ5 29856316
    454503 6d9j:j (3.2) BS01 rna ? GO:0003723 ... U3KPD5 29856316
    454504 6d9j:j (3.2) BS02 rna ? GO:0003723 ... U3KPD5 29856316
    454505 6d9j:k (3.2) BS01 rna N/A GO:0003735 ... N/A 29856316
    454506 6d9j:l (3.2) BS01 rna ? GO:0003735 ... G1TTN1 29856316
    454507 6d9j:l (3.2) BS02 rna ? GO:0003735 ... G1TTN1 29856316
    454508 6d9j:m (3.2) BS01 rna N/A GO:0003735 ... N/A 29856316
    454509 6d9j:o (3.2) BS01 rna ? GO:0003735 ... G1T040 29856316
    454510 6d9j:p (3.2) BS01 rna ? GO:0003735 ... G1SY53 29856316
    454511 6d9j:p (3.2) BS02 ZN ? GO:0003735 ... G1SY53 29856316
    454512 6d9j:r (3.2) BS01 rna ? GO:0003735 ... G1U7L1 29856316
    454513 6d9j:s (3.2) BS01 rna N/A GO:0042254 ... A0A1U7UFL5 29856316
    454514 6d9j:t (3.2) BS01 rna ? GO:0003723 ... G1SMR7 29856316
    454515 6d9k:A (2.0) BS01 rna ? GO:0003676 ... A4WYU7 29996105
    454516 6d9k:A (2.0) BS02 dna ? GO:0003676 ... A4WYU7 29996105
    454517 6d9k:F (2.0) BS01 rna ? GO:0003676 ... A4WYU7 29996105
    454518 6d9k:F (2.0) BS02 dna ? GO:0003676 ... A4WYU7 29996105
    454519 6d9l:A (2.6) BS01 rna ? GO:0003676 ... A4WYU7 29996105
    454520 6d9l:A (2.6) BS02 dna ? GO:0003676 ... A4WYU7 29996105
    454521 6d9l:F (2.6) BS01 rna ? GO:0003676 ... A4WYU7 29996105
    454522 6d9l:F (2.6) BS02 dna ? GO:0003676 ... A4WYU7 29996105
    454523 6d9m:A (1.35) BS01 GTP 3.2.1.17 GO:0003796 ... P00720
    Q39UD1
    30964001
    454524 6d9m:A (1.35) BS02 GTP 3.2.1.17 GO:0003796 ... P00720
    Q39UD1
    30964001
    454525 6d9m:A (1.35) BS03 GMP 3.2.1.17 GO:0003796 ... P00720
    Q39UD1
    30964001
    454526 6d9m:A (1.35) BS04 POP 3.2.1.17 GO:0003796 ... P00720
    Q39UD1
    30964001
    454527 6d9m:A (1.35) BS05 MG 3.2.1.17 GO:0003796 ... P00720
    Q39UD1
    30964001
    454528 6d9r:A (1.64) BS01 9DG 2.4.2.8 GO:0000166 ... B9ZW32 31552824
    454529 6d9r:A (1.64) BS02 PRP 2.4.2.8 GO:0000166 ... B9ZW32 31552824
    454530 6d9r:B (1.64) BS01 9DG 2.4.2.8 GO:0000166 ... B9ZW32 31552824
    454531 6d9r:B (1.64) BS02 PRP 2.4.2.8 GO:0000166 ... B9ZW32 31552824
    454532 6d9s:A (2.105) BS01 G4P 2.4.2.8 GO:0000166 ... B9ZW32 31552824
    454533 6d9s:B (2.105) BS01 G4P 2.4.2.8 GO:0000166 ... B9ZW32 31552824
    454534 6d9s:B (2.105) BS02 MG 2.4.2.8 GO:0000166 ... B9ZW32 31552824
    454535 6d9t:A (2.0) BS01 UDP 2.4.1.345
    2.4.1.57
    GO:0000166 ... A0A068A5A2 30968475
    454536 6d9t:A (2.0) BS02 UDP 2.4.1.345
    2.4.1.57
    GO:0000166 ... A0A068A5A2 30968475
    454537 6d9x:A (1.83) BS01 FZM ? GO:0000122 ... P61964 29889518 MOAD: Ki=323uM
    BindingDB: Ki=323000nM
    454538 6d9y:B (1.3) BS01 NAD 1.3.8.- GO:0000166 ... B2JLJ0 N/A
    454539 6da0:A (2.2) BS01 BGC 2.7.1.2 GO:0004340 ... A0A384E136 30783001
    454540 6da0:A (2.2) BS02 ANP 2.7.1.2 GO:0004340 ... A0A384E136 30783001
    454541 6da1:A (2.00013) BS01 peptide ? GO:0003700 ... P27577 30597162
    454542 6da1:B (2.00013) BS01 peptide ? GO:0003700 ... P27577 30597162
    454543 6da2:A (2.65) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932
    454544 6da2:A (2.65) BS02 G0D 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932
    454545 6da3:A (2.37) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932
    454546 6da3:A (2.37) BS02 G0D 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932 MOAD: Kd=0.063uM
    454547 6da4:A (2.9) BS01 G4V 2.7.10.2 GO:0004672 ... P52333 30423248
    454548 6da5:A (2.25) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932
    454549 6da5:A (2.25) BS02 G1J 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932 MOAD: Kd=0.07uM
    454550 6da8:A (2.802) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932
    454551 6da8:A (2.802) BS02 G0J 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932
    454552 6da9:A (2.05) BS01 FMN 4.1.1.93 GO:0000166 ... C6ZCR8 30152678
    454553 6da9:A (2.05) BS02 MN 4.1.1.93 GO:0000166 ... C6ZCR8 30152678
    454554 6daa:A (2.15) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932
    454555 6daa:A (2.15) BS02 G0M 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932 MOAD: Kd=0.042uM
    454556 6dab:A (2.35) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932
    454557 6dab:A (2.35) BS02 G0V 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932 MOAD: Kd=0.042uM
    BindingDB: IC50=310nM
    454558 6dac:A (2.55) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932
    454559 6dac:A (2.55) BS02 FZV 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932 BindingDB: IC50=310nM
    454560 6dad:A (1.65) BS01 peptide ? GO:0000086 ... P0DP23 30348784
    454561 6dad:A (1.65) BS02 CA ? GO:0000086 ... P0DP23 30348784
    454562 6dad:A (1.65) BS03 CA ? GO:0000086 ... P0DP23 30348784
    454563 6dad:A (1.65) BS04 CA ? GO:0000086 ... P0DP23 30348784
    454564 6dad:B (1.65) BS01 peptide ? GO:0000086 ... P0DP23 30348784
    454565 6dad:B (1.65) BS02 CA ? GO:0000086 ... P0DP23 30348784
    454566 6dad:B (1.65) BS03 CA ? GO:0000086 ... P0DP23 30348784
    454567 6dad:B (1.65) BS04 CA ? GO:0000086 ... P0DP23 30348784
    454568 6dae:A (2.0) BS01 peptide ? GO:0000086 ... P0DP23 30348784
    454569 6dae:A (2.0) BS02 CA ? GO:0000086 ... P0DP23 30348784
    454570 6dae:A (2.0) BS03 CA ? GO:0000086 ... P0DP23 30348784
    454571 6dae:A (2.0) BS04 CA ? GO:0000086 ... P0DP23 30348784
    454572 6dae:B (2.0) BS01 peptide ? GO:0000086 ... P0DP23 30348784
    454573 6dae:B (2.0) BS02 CA ? GO:0000086 ... P0DP23 30348784
    454574 6dae:B (2.0) BS03 CA ? GO:0000086 ... P0DP23 30348784
    454575 6dae:B (2.0) BS04 CA ? GO:0000086 ... P0DP23 30348784
    454576 6daf:A (2.4) BS01 peptide ? GO:0000086 ... P0DP23 30348784
    454577 6daf:A (2.4) BS02 CA ? GO:0000086 ... P0DP23 30348784
    454578 6daf:A (2.4) BS03 CA ? GO:0000086 ... P0DP23 30348784
    454579 6daf:A (2.4) BS04 CA ? GO:0000086 ... P0DP23 30348784
    454580 6daf:A (2.4) BS05 CA ? GO:0000086 ... P0DP23 30348784
    454581 6daf:B (2.4) BS01 peptide ? GO:0000086 ... P0DP23 30348784
    454582 6daf:B (2.4) BS02 CA ? GO:0000086 ... P0DP23 30348784
    454583 6daf:B (2.4) BS03 CA ? GO:0000086 ... P0DP23 30348784
    454584 6daf:B (2.4) BS04 CA ? GO:0000086 ... P0DP23 30348784
    454585 6daf:B (2.4) BS05 CA ? GO:0000086 ... P0DP23 30348784
    454586 6dag:A (2.8) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932
    454587 6dag:A (2.8) BS02 G0Y 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932 BindingDB: IC50=310nM
    454588 6dah:A (2.502) BS01 CA ? GO:0000086 ... P0DP23 30348784
    454589 6dah:A (2.502) BS02 CA ? GO:0000086 ... P0DP23 30348784
    454590 6dah:A (2.502) BS03 CA ? GO:0000086 ... P0DP23 30348784
    454591 6dah:A (2.502) BS04 CA ? GO:0000086 ... P0DP23 30348784
    454592 6dah:B (2.502) BS01 CA ? GO:0000086 ... P0DP23 30348784
    454593 6dah:B (2.502) BS02 CA ? GO:0000086 ... P0DP23 30348784
    454594 6dah:B (2.502) BS03 CA ? GO:0000086 ... P0DP23 30348784
    454595 6dah:B (2.502) BS04 CA ? GO:0000086 ... P0DP23 30348784
    454596 6dah:C (2.502) BS01 CA ? GO:0000086 ... P0DP23 30348784
    454597 6dah:C (2.502) BS02 CA ? GO:0000086 ... P0DP23 30348784
    454598 6dah:C (2.502) BS03 CA ? GO:0000086 ... P0DP23 30348784
    454599 6dah:C (2.502) BS04 CA ? GO:0000086 ... P0DP23 30348784
    454600 6dah:D (2.502) BS01 CA ? GO:0000086 ... P0DP23 30348784

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).