SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    455001 6ddj:A (1.05) BS01 G7V ? N/A P25440 32651255
    455002 6ddp:A (1.49) BS01 NDP 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455003 6ddp:A (1.49) BS02 G6Y 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455004 6ddp:B (1.49) BS01 NDP 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455005 6ddp:B (1.49) BS02 G6Y 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455006 6ddp:C (1.49) BS01 G6Y 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455007 6ddp:C (1.49) BS02 NDP 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455008 6ddp:D (1.49) BS01 NDP 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455009 6ddp:D (1.49) BS02 G6Y 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455010 6dds:A (1.72) BS01 NDP 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455011 6dds:A (1.72) BS02 U75 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455012 6dds:B (1.72) BS01 NDP 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455013 6dds:B (1.72) BS02 U75 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455014 6dds:C (1.72) BS01 NDP 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455015 6dds:C (1.72) BS02 U75 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455016 6dds:D (1.72) BS01 NDP 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455017 6dds:D (1.72) BS02 U75 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455018 6ddt:A (2.1) BS01 FUC 3.2.1.25 GO:0004553 ... Q8K2I4 30552791
    455019 6ddt:A (2.1) BS02 CA 3.2.1.25 GO:0004553 ... Q8K2I4 30552791
    455020 6ddu:A (2.668) BS01 FUC 3.2.1.25 GO:0004553 ... Q8K2I4 30552791
    455021 6ddu:A (2.668) BS02 CA 3.2.1.25 GO:0004553 ... Q8K2I4 30552791
    455022 6ddu:A (2.668) BS03 BMA 3.2.1.25 GO:0004553 ... Q8K2I4 30552791
    455023 6ddw:A (1.4) BS01 NDP 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455024 6ddw:A (1.4) BS02 G7D 1.5.1.3 GO:0004146 ... P9WNX1 30930162
    455025 6ddz:A (1.97) BS01 ATP 2.7.1.77
    3.1.3.5
    3.1.3.99
    GO:0000255 ... P49902 29990496
    455026 6ddz:A (1.97) BS02 MG 2.7.1.77
    3.1.3.5
    3.1.3.99
    GO:0000255 ... P49902 29990496
    455027 6de2:A (2.1) BS01 ATP 2.7.1.77
    3.1.3.5
    3.1.3.99
    GO:0000255 ... P49902 29990496
    455028 6de3:A (3.06) BS01 ATP 2.7.1.77
    3.1.3.5
    3.1.3.99
    GO:0000255 ... P49902 29990496
    455029 6de4:A (2.411) BS01 NDP 1.5.1.3 GO:0000900 ... P00374 30930162
    455030 6de4:A (2.411) BS02 G6Y 1.5.1.3 GO:0000900 ... P00374 30930162 BindingDB: Ki=234nM
    455031 6de4:B (2.411) BS01 NDP 1.5.1.3 GO:0000900 ... P00374 30930162
    455032 6de4:B (2.411) BS02 G6Y 1.5.1.3 GO:0000900 ... P00374 30930162 BindingDB: Ki=234nM
    455033 6de5:A (2.3) BS01 NDP ? GO:0000166 ... P71968 30930162
    455034 6de5:A (2.3) BS02 G8J ? GO:0000166 ... P71968 30930162
    455035 6de6:A (2.1) BS01 ADP ? GO:0000166 ... Q60I59 37146865
    455036 6de6:A (2.1) BS02 FMN ? GO:0000166 ... Q60I59 37146865
    455037 6de6:A (2.1) BS03 SF4 ? GO:0000166 ... Q60I59 37146865
    455038 6de6:B (2.1) BS01 ADP ? GO:0000166 ... Q60I59 37146865
    455039 6de6:B (2.1) BS02 FMN ? GO:0000166 ... Q60I59 37146865
    455040 6de6:B (2.1) BS03 SF4 ? GO:0000166 ... Q60I59 37146865
    455041 6de7:D (4.123) BS01 MAN ? N/A P01857 29902444
    455042 6de7:G (4.123) BS01 MAN ? GO:0019031 ... Q2N0S6 29902444
    455043 6de7:L (4.123) BS01 MAN ? GO:0002250 ... P0DOY2 29902444
    455044 6de7:L (4.123) BS02 MAN ? GO:0002250 ... P0DOY2 29902444
    455045 6de9:A (1.95) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 32382661
    455046 6deb:B (1.7) BS01 MTX 1.5.1.5
    3.5.4.9
    GO:0000105 ... Q0PA35 N/A
    455047 6deb:B (1.7) BS02 MTX 1.5.1.5
    3.5.4.9
    GO:0000105 ... Q0PA35 N/A
    455048 6dec:A (4.6) BS01 ATP ? GO:0003779 ... P61157 30322896
    455049 6dec:B (4.6) BS01 ATP ? GO:0003779 ... A7MB62 30322896
    455050 6dec:H (4.6) BS01 ATP ? GO:0003779 ... P61157 30322896
    455051 6dec:I (4.6) BS01 ATP ? GO:0003779 ... A7MB62 30322896
    455052 6def:A (2.26) BS01 MG 3.-.-.- GO:0003924 ... G0SFF0 30087125
    455053 6def:B (2.26) BS01 MG 3.-.-.- GO:0003924 ... G0SFF0 30087125
    455054 6def:C (2.26) BS01 MG 3.-.-.- GO:0003924 ... G0SFF0 30087125
    455055 6def:D (2.26) BS01 MG 3.-.-.- GO:0003924 ... G0SFF0 30087125
    455056 6dei:A (1.699) BS01 peptide ? GO:0033551 ... P25651 30252178
    455057 6dei:B (1.699) BS01 peptide ? GO:0033551 ... P25651 30252178
    455058 6dei:B (1.699) BS02 peptide ? GO:0033551 ... P25651 30252178
    455059 6dek:A (2.971) BS01 FAD 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455060 6dek:A (2.971) BS02 MG 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455061 6dek:A (2.971) BS03 TPP 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455062 6del:A (2.119) BS01 MG 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455063 6del:A (2.119) BS02 CIE 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455064 6del:A (2.119) BS03 FAD 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455065 6del:A (2.119) BS04 TP9 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455066 6del:A (2.119) BS05 G8G 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455067 6dem:A (2.038) BS01 FAD 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455068 6dem:A (2.038) BS02 MG 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455069 6dem:A (2.038) BS03 TP9 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455070 6dem:A (2.038) BS04 60G 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455071 6den:A (1.806) BS01 MG 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455072 6den:A (1.806) BS02 G8A 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455073 6den:A (1.806) BS03 FAD 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455074 6den:A (1.806) BS04 TP9 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455075 6deo:A (1.971) BS01 FAD 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455076 6deo:A (1.971) BS02 MG 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455077 6deo:A (1.971) BS03 TP9 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455078 6deo:A (1.971) BS04 H4V 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455079 6dep:A (2.149) BS01 FAD 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455080 6dep:A (2.149) BS02 MG 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455081 6dep:A (2.149) BS03 1SM 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455082 6dep:A (2.149) BS04 TZD 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455083 6dep:A (2.149) BS05 TP9 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455084 6deq:A (2.127) BS01 FAD 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455085 6deq:A (2.127) BS02 MG 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455086 6deq:A (2.127) BS03 PXD 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455087 6deq:A (2.127) BS04 TP9 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455088 6der:A (2.126) BS01 FAD 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455089 6der:A (2.126) BS02 MG 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455090 6der:A (2.126) BS03 G87 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455091 6der:A (2.126) BS04 TZD 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455092 6der:A (2.126) BS05 TP9 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455093 6des:A (2.402) BS01 FAD 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455094 6des:A (2.402) BS02 MG 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455095 6des:A (2.402) BS03 6R4 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455096 6des:A (2.402) BS04 TZD 2.2.1.6 GO:0000166 ... A0A1D8PJF9 30249642
    455097 6det:A (1.75) BS01 ARG ? N/A S3MDF0 30242931 MOAD: Kd=0.006uM
    455098 6dew:A (2.0) BS01 FOF ? GO:0006744 ... O75208 30661980
    455099 6dew:B (2.0) BS01 64Z ? GO:0006744 ... O75208 30661980
    455100 6dex:B (2.1) BS01 ZN ? GO:0005634 ... Q74ZQ8 N/A
    455101 6df1:H (2.3) BS01 peptide N/A N/A N/A 30398859
    455102 6df2:B (2.6) BS01 peptide N/A N/A N/A 30398859
    455103 6df2:H (2.6) BS01 peptide N/A N/A N/A 30398859
    455104 6df4:A (1.3) BS01 G9Y ? GO:0004402 ... U3KMH2 30289257 MOAD: ic50=0.023uM
    455105 6df5:A (1.819) BS01 dna ? N/A Q86T24 32352758
    455106 6df5:A (1.819) BS02 dna ? N/A Q86T24 32352758
    455107 6df5:A (1.819) BS03 ZN ? N/A Q86T24 32352758
    455108 6df5:A (1.819) BS04 ZN ? N/A Q86T24 32352758
    455109 6df5:A (1.819) BS05 ZN ? N/A Q86T24 32352758
    455110 6df6:A (2.5) BS01 G8Y ? N/A P03372 30732944 MOAD: ic50=0.059uM
    BindingDB: IC50=0.059000nM
    455111 6df6:B (2.5) BS01 G8Y ? N/A P03372 30732944 MOAD: ic50=0.059uM
    BindingDB: IC50=0.059000nM
    455112 6df6:C (2.5) BS01 G8Y ? N/A P03372 30732944 MOAD: ic50=0.059uM
    BindingDB: IC50=0.059000nM
    455113 6df6:D (2.5) BS01 G8Y ? N/A P03372 30732944 MOAD: ic50=0.059uM
    BindingDB: IC50=0.059000nM
    455114 6df7:A (2.0) BS01 G9V ? GO:0004402 ... U3KMH2 30289257 MOAD: ic50=0.01uM
    455115 6df7:B (2.0) BS01 G9V ? GO:0004402 ... U3KMH2 30289257 MOAD: ic50=0.01uM
    455116 6df8:A (2.536) BS01 dna ? N/A Q86T24 32352758
    455117 6df8:A (2.536) BS02 dna ? N/A Q86T24 32352758
    455118 6df8:A (2.536) BS03 ZN ? N/A Q86T24 32352758
    455119 6df8:A (2.536) BS04 ZN ? N/A Q86T24 32352758
    455120 6df8:A (2.536) BS05 ZN ? N/A Q86T24 32352758
    455121 6df9:A (2.319) BS01 dna ? N/A Q86T24 32352758
    455122 6df9:A (2.319) BS02 dna ? N/A Q86T24 32352758
    455123 6df9:A (2.319) BS03 ZN ? N/A Q86T24 32352758
    455124 6df9:A (2.319) BS04 ZN ? N/A Q86T24 32352758
    455125 6df9:A (2.319) BS05 ZN ? N/A Q86T24 32352758
    455126 6dfa:A (1.908) BS01 dna ? N/A Q86T24 32352758
    455127 6dfa:A (1.908) BS02 dna ? N/A Q86T24 32352758
    455128 6dfa:A (1.908) BS03 ZN ? N/A Q86T24 32352758
    455129 6dfa:A (1.908) BS04 ZN ? N/A Q86T24 32352758
    455130 6dfa:A (1.908) BS05 ZN ? N/A Q86T24 32352758
    455131 6dfb:A (1.66) BS01 dna ? N/A Q86T24 32352758
    455132 6dfb:A (1.66) BS02 dna ? N/A Q86T24 32352758
    455133 6dfb:A (1.66) BS03 ZN ? N/A Q86T24 32352758
    455134 6dfb:A (1.66) BS04 ZN ? N/A Q86T24 32352758
    455135 6dfb:A (1.66) BS05 ZN ? N/A Q86T24 32352758
    455136 6dfc:A (1.85) BS01 dna ? N/A Q86T24 32352758
    455137 6dfc:A (1.85) BS02 dna ? N/A Q86T24 32352758
    455138 6dfc:A (1.85) BS03 ZN ? N/A Q86T24 32352758
    455139 6dfc:A (1.85) BS04 ZN ? N/A Q86T24 32352758
    455140 6dfc:A (1.85) BS05 ZN ? N/A Q86T24 32352758
    455141 6dfe:A (2.31) BS01 GN1 2.4.99.23 GO:0005829 ... A0A152KUZ3 30122450
    455142 6dfe:A (2.31) BS02 GN4 2.4.99.23 GO:0005829 ... A0A152KUZ3 30122450
    455143 6dfe:A (2.31) BS03 GA7 2.4.99.23 GO:0005829 ... A0A152KUZ3 30122450
    455144 6dfe:B (2.31) BS01 GN1 2.4.99.23 GO:0005829 ... A0A152KUZ3 30122450
    455145 6dfe:B (2.31) BS02 GN4 2.4.99.23 GO:0005829 ... A0A152KUZ3 30122450
    455146 6dfe:B (2.31) BS03 GA7 2.4.99.23 GO:0005829 ... A0A152KUZ3 30122450
    455147 6dff:C (3.9) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 30053425
    455148 6dff:C (3.9) BS02 MG 3.6.5.2 GO:0000139 ... P84077 30053425
    455149 6dff:H (3.9) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 30053425
    455150 6dff:H (3.9) BS02 MG 3.6.5.2 GO:0000139 ... P84077 30053425
    455151 6dff:M (3.9) BS01 peptide ? GO:0005515 ... P35585 30053425
    455152 6dff:S (3.9) BS01 peptide ? GO:0000139 ... Q96PC3 30053425
    455153 6dfg:G (4.42) BS01 MAN N/A N/A N/A 31672916
    455154 6dfg:G (4.42) BS02 MAN N/A N/A N/A 31672916
    455155 6dfg:G (4.42) BS03 MAN N/A N/A N/A 31672916
    455156 6dfg:H (4.42) BS01 MAN N/A N/A N/A 31672916
    455157 6dfg:H (4.42) BS02 MAN N/A N/A N/A 31672916
    455158 6dfg:H (4.42) BS03 MAN N/A N/A N/A 31672916
    455159 6dfg:I (4.42) BS01 MAN N/A N/A N/A 31672916
    455160 6dfg:I (4.42) BS02 MAN N/A N/A N/A 31672916
    455161 6dfg:I (4.42) BS03 MAN N/A N/A N/A 31672916
    455162 6dfh:G (3.85) BS01 MAN N/A N/A N/A 31672916
    455163 6dfh:H (3.85) BS01 MAN N/A N/A N/A 31672916
    455164 6dfh:I (3.85) BS01 MAN N/A N/A N/A 31672916
    455165 6dfl:A (2.396) BS01 G9S 2.7.10.2
    2.7.1.235
    GO:0004713 ... Q9HUF7 30237436
    455166 6dfm:A (2.14) BS01 3BH 3.6.4.10 GO:0005524 ... P11021 N/A BindingDB: Kd=6.80e+3nM, koff=>1s-1
    455167 6dfm:B (2.14) BS01 3BH 3.6.4.10 GO:0005524 ... P11021 N/A BindingDB: Kd=6.80e+3nM, koff=>1s-1
    455168 6dfn:A (2.1) BS01 G9J ? N/A P03372 30732944
    455169 6dfn:B (2.1) BS01 G91 ? N/A P03372 30732944 MOAD: ic50=0.055uM
    BindingDB: IC50=0.055000nM
    455170 6dfn:B (2.1) BS02 G9J ? N/A P03372 30732944
    455171 6dfn:C (2.1) BS01 G9J ? N/A P03372 30732944
    455172 6dfn:D (2.1) BS01 G9J ? N/A P03372 30732944
    455173 6dfn:D (2.1) BS02 G91 ? N/A P03372 30732944 MOAD: ic50=0.055uM
    BindingDB: IC50=0.055000nM
    455174 6dfo:A (2.54) BS01 GBA 3.6.4.10 GO:0005524 ... P11021 N/A
    455175 6dfo:B (2.54) BS01 GBA 3.6.4.10 GO:0005524 ... P11021 N/A
    455176 6dfq:C (2.6) BS01 CA N/A N/A N/A 30952805
    455177 6dfr:A (2.4) BS01 NAP 1.5.1.3 GO:0004146 ... P0ABQ4 2185835 MOAD: Kd=24uM
    455178 6dft:A (3.5) BS01 NAD 2.5.1.46 GO:0005515 ... Q38BX0 30197036
    455179 6dft:A (3.5) BS02 NAD 2.5.1.46 GO:0005515 ... Q38BX0 30197036
    455180 6dft:B (3.5) BS01 NAD 2.5.1.46 GO:0005737 ... Q4GZD1 30197036
    455181 6dft:B (3.5) BS02 NAD 2.5.1.46 GO:0005737 ... Q4GZD1 30197036
    455182 6dft:C (3.5) BS01 NAD 2.5.1.46 GO:0005515 ... Q38BX0 30197036
    455183 6dft:C (3.5) BS02 NAD 2.5.1.46 GO:0005515 ... Q38BX0 30197036
    455184 6dft:D (3.5) BS01 NAD 2.5.1.46 GO:0005737 ... Q4GZD1 30197036
    455185 6dft:D (3.5) BS02 NAD 2.5.1.46 GO:0005737 ... Q4GZD1 30197036
    455186 6dft:E (3.5) BS01 NAD 2.5.1.46 GO:0005515 ... Q38BX0 30197036
    455187 6dft:E (3.5) BS02 NAD 2.5.1.46 GO:0005515 ... Q38BX0 30197036
    455188 6dft:F (3.5) BS01 NAD 2.5.1.46 GO:0005737 ... Q4GZD1 30197036
    455189 6dft:F (3.5) BS02 NAD 2.5.1.46 GO:0005737 ... Q4GZD1 30197036
    455190 6dft:G (3.5) BS01 NAD 2.5.1.46 GO:0005515 ... Q38BX0 30197036
    455191 6dft:G (3.5) BS02 NAD 2.5.1.46 GO:0005515 ... Q38BX0 30197036
    455192 6dft:H (3.5) BS01 NAD 2.5.1.46 GO:0005737 ... Q4GZD1 30197036
    455193 6dft:H (3.5) BS02 NAD 2.5.1.46 GO:0005737 ... Q4GZD1 30197036
    455194 6dft:I (3.5) BS01 NAD 2.5.1.46 GO:0005515 ... Q38BX0 30197036
    455195 6dft:I (3.5) BS02 NAD 2.5.1.46 GO:0005515 ... Q38BX0 30197036
    455196 6dft:J (3.5) BS01 NAD 2.5.1.46 GO:0005737 ... Q4GZD1 30197036
    455197 6dft:J (3.5) BS02 NAD 2.5.1.46 GO:0005737 ... Q4GZD1 30197036
    455198 6dft:K (3.5) BS01 NAD 2.5.1.46 GO:0005515 ... Q38BX0 30197036
    455199 6dft:K (3.5) BS02 NAD 2.5.1.46 GO:0005515 ... Q38BX0 30197036
    455200 6dft:L (3.5) BS01 NAD 2.5.1.46 GO:0005737 ... Q4GZD1 30197036

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).