SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 2277 2278 2279 2280 2281 2282 2283 2284 2285 2286 2287 2288 2289 2290 2291 2292 2293 2294 2295 2296 2297 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    457201 6dqb:A (1.791) BS04 MN 1.14.11.67 N/A P29375 30392349
    457202 6dqc:A (1.755) BS01 H5Y 1.14.11.67 N/A P29375 N/A
    457203 6dqc:A (1.755) BS02 MN 1.14.11.67 N/A P29375 N/A
    457204 6dqd:A (1.987) BS01 H67 1.14.11.67 N/A P29375 N/A
    457205 6dqd:A (1.987) BS02 MN 1.14.11.67 N/A P29375 N/A
    457206 6dqe:A (1.689) BS01 H6A 1.14.11.67 N/A P29375 N/A
    457207 6dqe:A (1.689) BS02 MN 1.14.11.67 N/A P29375 N/A
    457208 6dqf:A (1.688) BS01 H61 1.14.11.67 N/A P29375 N/A
    457209 6dqf:A (1.688) BS02 MN 1.14.11.67 N/A P29375 N/A
    457210 6dqh:A (1.104) BS01 ZN N/A N/A N/A N/A
    457211 6dqj:A (3.49) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457212 6dqj:B (3.49) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457213 6dqj:C (3.49) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457214 6dqj:D (3.49) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457215 6dql:A (3.3) BS01 peptide ? N/A D3KVD8 31197146
    457216 6dqn:A (3.33) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457217 6dqn:A (3.33) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457218 6dqn:B (3.33) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457219 6dqn:B (3.33) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457220 6dqn:C (3.33) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457221 6dqn:C (3.33) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457222 6dqn:D (3.33) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457223 6dqn:D (3.33) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457224 6dqo:A (1.705) BS01 FMN 1.5.1.38 GO:0005515 ... P80644 30171650
    457225 6dqo:A (1.705) BS02 FMN 1.5.1.38 GO:0005515 ... P80644 30171650
    457226 6dqq:A (1.85) BS01 peptide ? GO:0015833 ... Q4QLH0 30455346
    457227 6dqr:A (2.08) BS01 peptide ? GO:0015833 ... Q4QLH0 30455346
    457228 6dqs:A (4.12) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457229 6dqs:A (4.12) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457230 6dqs:B (4.12) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457231 6dqs:B (4.12) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457232 6dqs:C (4.12) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457233 6dqs:C (4.12) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457234 6dqs:D (4.12) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457235 6dqs:D (4.12) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457236 6dqt:A (1.95) BS01 peptide ? GO:0015833 ... Q4QLH0 30455346
    457237 6dqu:A (1.65) BS01 peptide ? GO:0015833 ... Q4QLH0 30455346
    457238 6dqv:A (3.82) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457239 6dqv:A (3.82) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457240 6dqv:B (3.82) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457241 6dqv:B (3.82) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457242 6dqv:C (3.82) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457243 6dqv:C (3.82) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457244 6dqv:D (3.82) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457245 6dqv:D (3.82) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457246 6dqy:A (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457247 6dqy:B (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457248 6dqy:C (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457249 6dqy:D (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457250 6dqy:E (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457251 6dqy:F (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457252 6dqy:G (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457253 6dqy:H (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457254 6dqy:I (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457255 6dqy:J (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457256 6dqy:K (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457257 6dqy:L (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457258 6dqy:M (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457259 6dqy:N (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457260 6dqy:O (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457261 6dqy:P (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457262 6dqy:Q (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457263 6dqy:R (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457264 6dqy:S (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457265 6dqy:T (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457266 6dqy:U (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457267 6dqy:V (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457268 6dqy:W (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457269 6dqy:X (2.3) BS01 MN 1.15.1.1 GO:0004784 ... G0RQS7 N/A
    457270 6dqz:A (6.01) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457271 6dqz:A (6.01) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457272 6dqz:B (6.01) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457273 6dqz:B (6.01) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457274 6dqz:C (6.01) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457275 6dqz:C (6.01) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457276 6dqz:D (6.01) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457277 6dqz:D (6.01) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457278 6dr0:A (4.47) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457279 6dr0:A (4.47) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457280 6dr0:B (4.47) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457281 6dr0:B (4.47) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457282 6dr0:C (4.47) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457283 6dr0:C (4.47) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457284 6dr0:D (4.47) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457285 6dr0:D (4.47) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457286 6dr2:A (4.33) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457287 6dr2:A (4.33) BS02 CA ? GO:0000822 ... Q14573 30013099
    457288 6dr2:A (4.33) BS03 CA ? GO:0000822 ... Q14573 30013099
    457289 6dr2:B (4.33) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457290 6dr2:B (4.33) BS02 CA ? GO:0000822 ... Q14573 30013099
    457291 6dr2:B (4.33) BS03 CA ? GO:0000822 ... Q14573 30013099
    457292 6dr2:C (4.33) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457293 6dr2:C (4.33) BS02 CA ? GO:0000822 ... Q14573 30013099
    457294 6dr2:C (4.33) BS03 CA ? GO:0000822 ... Q14573 30013099
    457295 6dr2:D (4.33) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457296 6dr2:D (4.33) BS02 CA ? GO:0000822 ... Q14573 30013099
    457297 6dr2:D (4.33) BS03 CA ? GO:0000822 ... Q14573 30013099
    457298 6dr8:A (1.476) BS01 ZN N/A N/A N/A N/A
    457299 6dr8:A (1.476) BS02 ZN N/A N/A N/A N/A
    457300 6dr8:A (1.476) BS03 1KA N/A N/A N/A N/A
    457301 6dra:A (3.96) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457302 6dra:A (3.96) BS02 CA ? GO:0000822 ... Q14573 30013099
    457303 6dra:A (3.96) BS03 CA ? GO:0000822 ... Q14573 30013099
    457304 6dra:B (3.96) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457305 6dra:B (3.96) BS02 CA ? GO:0000822 ... Q14573 30013099
    457306 6dra:B (3.96) BS03 CA ? GO:0000822 ... Q14573 30013099
    457307 6dra:C (3.96) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457308 6dra:C (3.96) BS02 CA ? GO:0000822 ... Q14573 30013099
    457309 6dra:C (3.96) BS03 CA ? GO:0000822 ... Q14573 30013099
    457310 6dra:D (3.96) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457311 6dra:D (3.96) BS02 CA ? GO:0000822 ... Q14573 30013099
    457312 6dra:D (3.96) BS03 CA ? GO:0000822 ... Q14573 30013099
    457313 6drb:A (2.745) BS01 WO4 3.1.3.48 GO:0004725 ... O68720 30110154
    457314 6drc:A (3.92) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457315 6drc:A (3.92) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457316 6drc:A (3.92) BS03 CA ? GO:0000822 ... Q14573 30013099
    457317 6drc:A (3.92) BS04 CA ? GO:0000822 ... Q14573 30013099
    457318 6drc:B (3.92) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457319 6drc:B (3.92) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457320 6drc:B (3.92) BS03 CA ? GO:0000822 ... Q14573 30013099
    457321 6drc:B (3.92) BS04 CA ? GO:0000822 ... Q14573 30013099
    457322 6drc:C (3.92) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457323 6drc:C (3.92) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457324 6drc:C (3.92) BS03 CA ? GO:0000822 ... Q14573 30013099
    457325 6drc:C (3.92) BS04 CA ? GO:0000822 ... Q14573 30013099
    457326 6drc:D (3.92) BS01 ZN ? GO:0000822 ... Q14573 30013099
    457327 6drc:D (3.92) BS02 I3P ? GO:0000822 ... Q14573 30013099 BindingDB: Kd=195nM
    457328 6drc:D (3.92) BS03 CA ? GO:0000822 ... Q14573 30013099
    457329 6drc:D (3.92) BS04 CA ? GO:0000822 ... Q14573 30013099
    457330 6drd:C (3.9) BS01 ZN ? GO:0000428 ... P19387 30190596
    457331 6drd:I (3.9) BS01 ZN ? GO:0000428 ... P36954 30190596
    457332 6drd:I (3.9) BS02 ZN ? GO:0000428 ... P36954 30190596
    457333 6drd:J (3.9) BS01 ZN ? GO:0000428 ... P62875 30190596
    457334 6drd:L (3.9) BS01 ZN ? GO:0000428 ... P53803 30190596
    457335 6dre:A (1.8) BS01 MG 3.2.2.19 GO:0003875 ... A8GG79 30343895
    457336 6drg:A (-1.00) BS01 2VN ? GO:0003682 ... P07148 30598509
    457337 6drh:C (2.299) BS01 MG 3.2.2.19 GO:0003875 ... A8GG79 30343895
    457338 6drj:A (3.3) BS01 APR ? GO:0005216 ... A0A0R4IMY7 30250252
    457339 6drj:A (3.3) BS02 CA ? GO:0005216 ... A0A0R4IMY7 30250252
    457340 6drj:B (3.3) BS01 APR ? GO:0005216 ... A0A0R4IMY7 30250252
    457341 6drj:B (3.3) BS02 CA ? GO:0005216 ... A0A0R4IMY7 30250252
    457342 6drj:C (3.3) BS01 APR ? GO:0005216 ... A0A0R4IMY7 30250252
    457343 6drj:C (3.3) BS02 CA ? GO:0005216 ... A0A0R4IMY7 30250252
    457344 6drj:D (3.3) BS01 APR ? GO:0005216 ... A0A0R4IMY7 30250252
    457345 6drj:D (3.3) BS02 CA ? GO:0005216 ... A0A0R4IMY7 30250252
    457346 6drs:A (1.997) BS01 H8A 1.5.1.3 GO:0004146 ... B8NBN5 N/A
    457347 6drs:A (1.997) BS02 NAP 1.5.1.3 GO:0004146 ... B8NBN5 N/A
    457348 6drt:A (2.117) BS01 peptide ? GO:0006260 ... P04525 30169742
    457349 6drt:B (2.117) BS01 peptide ? GO:0006260 ... P04525 30169742
    457350 6drt:C (2.117) BS01 peptide ? GO:0006260 ... P04525 30169742
    457351 6dru:A (2.7) BS01 BMA 3.2.1.177 GO:0003824 ... A2QTU5 32161692
    457352 6dru:A (2.7) BS02 MAN 3.2.1.177 GO:0003824 ... A2QTU5 32161692
    457353 6dru:A (2.7) BS03 MAN 3.2.1.177 GO:0003824 ... A2QTU5 32161692
    457354 6dru:A (2.7) BS04 MAN 3.2.1.177 GO:0003824 ... A2QTU5 32161692
    457355 6dru:A (2.7) BS05 BGC 3.2.1.177 GO:0003824 ... A2QTU5 32161692
    457356 6dru:A (2.7) BS06 BGC 3.2.1.177 GO:0003824 ... A2QTU5 32161692
    457357 6dru:A (2.7) BS07 MAN 3.2.1.177 GO:0003824 ... A2QTU5 32161692
    457358 6dru:A (2.7) BS08 MAN 3.2.1.177 GO:0003824 ... A2QTU5 32161692
    457359 6dru:A (2.7) BS09 XYS 3.2.1.177 GO:0003824 ... A2QTU5 32161692
    457360 6dru:B (2.7) BS01 MAN 3.2.1.177 GO:0003824 ... A2QTU5 32161692
    457361 6dru:B (2.7) BS02 MAN 3.2.1.177 GO:0003824 ... A2QTU5 32161692
    457362 6dru:B (2.7) BS03 MAN 3.2.1.177 GO:0003824 ... A2QTU5 32161692
    457363 6dru:B (2.7) BS04 MAN 3.2.1.177 GO:0003824 ... A2QTU5 32161692
    457364 6dru:B (2.7) BS05 BGC 3.2.1.177 GO:0003824 ... A2QTU5 32161692
    457365 6dru:B (2.7) BS06 XYS 3.2.1.177 GO:0003824 ... A2QTU5 32161692
    457366 6drw:A (2.303) BS01 SKE 2.7.10.2 GO:0004672 ... O60674 N/A BindingDB: Kd=220nM, IC50=2960nM, Ki=220000nM
    457367 6drx:A (3.1) BS01 H8G ? GO:0004930 ... P0ABE7
    P41595
    30127358
    457368 6drx:A (3.1) BS02 CLR ? GO:0004930 ... P0ABE7
    P41595
    30127358
    457369 6dry:A (2.918) BS01 H8D ? GO:0004930 ... P0ABE7
    P41595
    30127358
    457370 6dry:A (2.918) BS02 CLR ? GO:0004930 ... P0ABE7
    P41595
    30127358
    457371 6drz:A (3.102) BS01 CLR ? GO:0004930 ... P0ABE7
    P41595
    30127358
    457372 6drz:A (3.102) BS02 H8J ? GO:0004930 ... P0ABE7
    P41595
    30127358
    457373 6ds0:A (3.188) BS01 CLR ? GO:0004930 ... P0ABE7
    P41595
    30127358
    457374 6ds0:A (3.188) BS02 H8M ? GO:0004930 ... P0ABE7
    P41595
    30127358
    457375 6ds1:A (2.119) BS01 NAP ? GO:0000166 ... Q0PB28 31925306
    457376 6ds1:B (2.119) BS01 NAP ? GO:0000166 ... Q0PB28 31925306
    457377 6ds1:B (2.119) BS02 MG ? GO:0000166 ... Q0PB28 31925306
    457378 6ds1:C (2.119) BS01 NAP ? GO:0000166 ... Q0PB28 31925306
    457379 6ds1:D (2.119) BS01 NAP ? GO:0000166 ... Q0PB28 31925306
    457380 6ds1:D (2.119) BS02 MG ? GO:0000166 ... Q0PB28 31925306
    457381 6ds2:A (2.1) BS01 NI ? GO:0002523 ... P05109 29890074
    457382 6ds2:B (2.1) BS01 NI ? GO:0002523 ... P06702 29890074
    457383 6ds2:C (2.1) BS01 NI ? GO:0002523 ... P05109 29890074
    457384 6ds2:C (2.1) BS02 NI ? GO:0002523 ... P05109 29890074
    457385 6ds2:D (2.1) BS01 NI ? GO:0002523 ... P06702 29890074
    457386 6ds2:D (2.1) BS02 NI ? GO:0002523 ... P06702 29890074
    457387 6ds2:E (2.1) BS01 NI ? GO:0002523 ... P05109 29890074
    457388 6ds2:E (2.1) BS02 NI ? GO:0002523 ... P05109 29890074
    457389 6ds2:F (2.1) BS01 NI ? GO:0002523 ... P06702 29890074
    457390 6ds2:F (2.1) BS02 NI ? GO:0002523 ... P06702 29890074
    457391 6ds2:G (2.1) BS01 NI ? GO:0002523 ... P05109 29890074
    457392 6ds2:H (2.1) BS01 NI ? GO:0002523 ... P06702 29890074
    457393 6ds6:A (1.95) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 30150647
    457394 6ds6:A (1.95) BS02 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 30150647
    457395 6ds7:A (1.9) BS01 HEM 1.14.99.57 GO:0004392 ... P9WKH3 N/A
    457396 6ds7:A (1.9) BS02 HEM 1.14.99.57 GO:0004392 ... P9WKH3 N/A
    457397 6ds7:B (1.9) BS01 HEM 1.14.99.57 GO:0004392 ... P9WKH3 N/A
    457398 6ds7:B (1.9) BS02 HEM 1.14.99.57 GO:0004392 ... P9WKH3 N/A
    457399 6ds8:A (2.4) BS01 MNH 1.14.99.57 GO:0004392 ... P9WKH3 N/A
    457400 6ds8:A (2.4) BS02 MNH 1.14.99.57 GO:0004392 ... P9WKH3 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).