SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    459201 6e9f:A (3.3) BS02 rna ? N/A B0MS50 30241607
    459202 6e9l:A (2.8) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 30384606
    459203 6e9l:A (2.8) BS02 J0P 2.7.11.11 GO:0000287 ... P00517 30384606
    459204 6e9n:A (2.915) BS01 GCO ? GO:0005886 ... J7QAK3 31083648
    459205 6e9o:A (3.501) BS01 J0M ? GO:0005886 ... J7QAK3 31083648
    459206 6e9o:B (3.501) BS01 J0M ? GO:0005886 ... J7QAK3 31083648
    459207 6e9p:A (2.569) BS01 HDJ 4.2.1.20 GO:0000162 ... P9WFY1 N/A
    459208 6e9p:B (2.569) BS01 HDJ 4.2.1.20 GO:0000162 ... P9WFX9 N/A
    459209 6e9p:D (2.569) BS01 HDJ 4.2.1.20 GO:0000162 ... P9WFX9 N/A
    459210 6e9p:F (2.569) BS01 HDJ 4.2.1.20 GO:0000162 ... P9WFX9 N/A
    459211 6e9p:G (2.569) BS01 HDJ 4.2.1.20 GO:0000162 ... P9WFY1 N/A
    459212 6e9p:H (2.569) BS01 HDJ 4.2.1.20 GO:0000162 ... P9WFX9 N/A
    459213 6e9w:A (2.96) BS01 J0P 2.7.11.1 GO:0004672 ... Q13464 30384606 BindingDB: IC50=450nM
    459214 6e9w:B (2.96) BS01 J0P 2.7.11.1 GO:0004672 ... Q13464 30384606 BindingDB: IC50=450nM
    459215 6ea1:A (1.815) BS01 ZN 3.4.11.- GO:0006508 ... O96935 30537832
    459216 6ea1:A (1.815) BS02 J0Y 3.4.11.- GO:0006508 ... O96935 30537832 MOAD: Ki=257nM
    459217 6ea2:A (1.35) BS01 ZN 3.4.11.- GO:0006508 ... O96935 30537832
    459218 6ea2:A (1.35) BS02 J1G 3.4.11.- GO:0006508 ... O96935 30537832 MOAD: Ki=285nM
    459219 6ea3:B (1.65) BS01 SRP ? N/A Q47NS0 N/A
    459220 6ea4:A (2.45) BS01 MAN 3.4.11.- GO:0002250 ... Q6P179 N/A
    459221 6ea4:A (2.45) BS02 ZN 3.4.11.- GO:0002250 ... Q6P179 N/A
    459222 6ea4:A (2.45) BS03 J2G 3.4.11.- GO:0002250 ... Q6P179 N/A
    459223 6ea4:A (2.45) BS04 LYS 3.4.11.- GO:0002250 ... Q6P179 N/A
    459224 6ea4:A (2.45) BS05 LYS 3.4.11.- GO:0002250 ... Q6P179 N/A
    459225 6ea4:B (2.45) BS01 ZN 3.4.11.- GO:0002250 ... Q6P179 N/A
    459226 6ea4:B (2.45) BS02 J2G 3.4.11.- GO:0002250 ... Q6P179 N/A
    459227 6ea4:B (2.45) BS03 LYS 3.4.11.- GO:0002250 ... Q6P179 N/A
    459228 6ea4:B (2.45) BS04 LYS 3.4.11.- GO:0002250 ... Q6P179 N/A
    459229 6ea7:L (4.25) BS01 MAN N/A N/A N/A 30206174
    459230 6ea8:A (2.6) BS01 J2A 3.1.-.- GO:0004518 ... Q01225 30728498
    459231 6ea8:B (2.6) BS01 J2A 3.1.-.- GO:0004518 ... Q01225 30728498
    459232 6ea8:E (2.6) BS01 J2A 3.1.-.- GO:0004518 ... Q01225 30728498
    459233 6ea8:F (2.6) BS01 J2A 3.1.-.- GO:0004518 ... Q01225 30728498
    459234 6ea8:G (2.6) BS01 J2B 3.1.-.- GO:0004518 ... Q01225 30728498
    459235 6ea8:H (2.6) BS01 J2B 3.1.-.- GO:0004518 ... Q01225 30728498
    459236 6ea9:A (2.1) BS01 9BG 3.1.-.- GO:0004518 ... Q01225 30728498
    459237 6ea9:A (2.1) BS02 9BG 3.1.-.- GO:0004518 ... Q01225 30728498
    459238 6ea9:B (2.1) BS01 9BG 3.1.-.- GO:0004518 ... Q01225 30728498
    459239 6ea9:B (2.1) BS02 9BG 3.1.-.- GO:0004518 ... Q01225 30728498
    459240 6ea9:C (2.1) BS01 9BG 3.1.-.- GO:0004518 ... Q01225 30728498
    459241 6ea9:C (2.1) BS02 9BG 3.1.-.- GO:0004518 ... Q01225 30728498
    459242 6ea9:D (2.1) BS01 9BG 3.1.-.- GO:0004518 ... Q01225 30728498
    459243 6ea9:D (2.1) BS02 9BG 3.1.-.- GO:0004518 ... Q01225 30728498
    459244 6ea9:E (2.1) BS01 9BG 3.1.-.- GO:0004518 ... Q01225 30728498
    459245 6eaa:A (1.65) BS01 ZN 3.4.11.- GO:0006508 ... O96935 30537832
    459246 6eaa:A (1.65) BS02 J1V 3.4.11.- GO:0006508 ... O96935 30537832 MOAD: Ki=818nM
    459247 6eab:A (1.85) BS01 ZN 3.4.11.- GO:0006508 ... O96935 30537832
    459248 6eab:A (1.85) BS02 J2D 3.4.11.- GO:0006508 ... O96935 30537832 MOAD: Ki=431nM
    459249 6eac:A (2.269) BS01 MG 2.7.7.108 GO:0000287 ... Q87VB1 30270044
    459250 6eac:A (2.269) BS02 CA 2.7.7.108 GO:0000287 ... Q87VB1 30270044
    459251 6eac:A (2.269) BS03 CA 2.7.7.108 GO:0000287 ... Q87VB1 30270044
    459252 6eac:A (2.269) BS04 ANP 2.7.7.108 GO:0000287 ... Q87VB1 30270044
    459253 6eac:B (2.269) BS01 MG 2.7.7.108 GO:0000287 ... Q87VB1 30270044
    459254 6eac:B (2.269) BS02 CA 2.7.7.108 GO:0000287 ... Q87VB1 30270044
    459255 6eac:B (2.269) BS03 CA 2.7.7.108 GO:0000287 ... Q87VB1 30270044
    459256 6eac:B (2.269) BS04 ANP 2.7.7.108 GO:0000287 ... Q87VB1 30270044
    459257 6eac:C (2.269) BS01 MG 2.7.7.108 GO:0000287 ... Q87VB1 30270044
    459258 6eac:C (2.269) BS02 CA 2.7.7.108 GO:0000287 ... Q87VB1 30270044
    459259 6eac:C (2.269) BS03 ANP 2.7.7.108 GO:0000287 ... Q87VB1 30270044
    459260 6eac:D (2.269) BS01 MG 2.7.7.108 GO:0000287 ... Q87VB1 30270044
    459261 6eac:D (2.269) BS02 CA 2.7.7.108 GO:0000287 ... Q87VB1 30270044
    459262 6eac:D (2.269) BS03 ANP 2.7.7.108 GO:0000287 ... Q87VB1 30270044
    459263 6eag:F (3.302) BS01 5NK ? GO:0019064 ... P03420 N/A
    459264 6eah:C (3.0) BS01 FUC ? GO:0019064 ... P03420 N/A
    459265 6eak:F (2.6) BS01 5NK ? GO:0019064 ... P03420 N/A
    459266 6eaq:A (2.22) BS01 GAL ? N/A P0DOX5 30361439
    459267 6eaq:B (2.22) BS01 BMA ? N/A P0DOX5 30361439
    459268 6eaq:B (2.22) BS02 GAL ? N/A P0DOX5 30361439
    459269 6eas:A (2.0) BS01 J3A ? GO:0004672 ... C0P4K9 N/A
    459270 6eat:A (1.149) BS01 peptide 3.4.21.4 GO:0004175 ... P00760 30817908
    459271 6eat:A (1.149) BS02 CA 3.4.21.4 GO:0004175 ... P00760 30817908
    459272 6eau:A (1.18) BS01 peptide 3.4.21.4 GO:0004175 ... P00760 N/A
    459273 6eau:A (1.18) BS02 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    459274 6eav:A (1.391) BS01 peptide 3.4.21.4 GO:0004175 ... P00760 N/A
    459275 6eav:A (1.391) BS02 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    459276 6eaw:A (1.289) BS01 peptide 3.4.21.4 GO:0004175 ... P00760 N/A
    459277 6eaw:A (1.289) BS02 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    459278 6eax:A (1.189) BS01 peptide 3.4.21.4 GO:0004175 ... P00760 N/A
    459279 6eax:A (1.189) BS02 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    459280 6eax:A (1.189) BS03 J3D 3.4.21.4 GO:0004175 ... P00760 N/A
    459281 6eb0:C (2.37) BS01 ACT ? GO:0004497 ... A0A140NG21 31068633
    459282 6eb1:A (2.2) BS01 J3M ? GO:0003676 ... F2WR52 30783506 MOAD: ic50=4.65uM
    BindingDB: IC50=4650nM
    459283 6eb2:A (2.493) BS01 J3P ? GO:0003676 ... F2WR52 30783506 MOAD: ic50=0.48uM
    BindingDB: IC50=23400nM, EC50=<1790nM
    459284 6eb3:A (2.35) BS01 J3J N/A N/A N/A N/A
    459285 6eb3:B (2.35) BS01 J3G N/A N/A N/A N/A
    459286 6eb3:C (2.35) BS01 ABU N/A N/A N/A N/A
    459287 6eb3:D (2.35) BS01 ABU N/A N/A N/A N/A
    459288 6eb5:A (2.6) BS01 CA ? GO:0005509 ... Q96QU1 32963095
    459289 6eb5:A (2.6) BS02 CA ? GO:0005509 ... Q96QU1 32963095
    459290 6eb5:A (2.6) BS03 CA ? GO:0005509 ... Q96QU1 32963095
    459291 6eb5:B (2.6) BS01 CA ? GO:0005509 ... Q96QU1 32963095
    459292 6eb5:B (2.6) BS02 CA ? GO:0005509 ... Q96QU1 32963095
    459293 6eb5:B (2.6) BS03 CA ? GO:0005509 ... Q96QU1 32963095
    459294 6eb7:A (1.58) BS01 BEF ? GO:0000160 ... A0A0H2UQ68 N/A
    459295 6eb7:A (1.58) BS02 MN ? GO:0000160 ... A0A0H2UQ68 N/A
    459296 6ebd:A (2.61) BS01 J3S ? GO:0006979 ... A0A202B6V5 N/A
    459297 6ebd:A (2.61) BS02 J3S ? GO:0006979 ... A0A202B6V5 N/A
    459298 6ebd:B (2.61) BS01 J3S ? GO:0006979 ... A0A202B6V5 N/A
    459299 6ebd:C (2.61) BS01 J3S ? GO:0006979 ... A0A202B6V5 N/A
    459300 6ebe:A (1.88) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 30433782
    459301 6ebe:A (1.88) BS02 J3V 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 30433782 MOAD: Ki=0.2uM
    459302 6ebg:A (2.15) BS01 J3S ? GO:0006979 ... Q7NV52 N/A
    459303 6ebg:A (2.15) BS02 J3S ? GO:0006979 ... Q7NV52 N/A
    459304 6ebg:B (2.15) BS01 J3S ? GO:0006979 ... Q7NV52 N/A
    459305 6ebg:B (2.15) BS02 J3S ? GO:0006979 ... Q7NV52 N/A
    459306 6ebg:C (2.15) BS01 J3S ? GO:0006979 ... Q7NV52 N/A
    459307 6ebg:D (2.15) BS01 J3S ? GO:0006979 ... Q7NV52 N/A
    459308 6ebg:D (2.15) BS02 J3S ? GO:0006979 ... Q7NV52 N/A
    459309 6ebk:A (3.3) BS01 NAP 1.1.1.- GO:0002244 ... P62483 30109985
    459310 6ebk:C (3.3) BS01 NAP 1.1.1.- GO:0002244 ... P62483 30109985
    459311 6ebk:E (3.3) BS01 NAP 1.1.1.- GO:0002244 ... P62483 30109985
    459312 6ebk:G (3.3) BS01 NAP 1.1.1.- GO:0002244 ... P62483 30109985
    459313 6ebl:A (3.0) BS01 NAP 1.1.1.- GO:0002244 ... P62483 30109985
    459314 6ebl:C (3.0) BS01 NAP 1.1.1.- GO:0002244 ... P62483 30109985
    459315 6ebl:E (3.0) BS01 NAP 1.1.1.- GO:0002244 ... P62483 30109985
    459316 6ebl:G (3.0) BS01 NAP 1.1.1.- GO:0002244 ... P62483 30109985
    459317 6ebo:A (1.58) BS01 CA 1.17.4.1 GO:0004748 ... F2I8X9 30224458
    459318 6ebo:B (1.58) BS01 CA 1.17.4.1 GO:0004748 ... F2I8X9 30224458
    459319 6ebo:C (1.58) BS01 CA 1.17.4.1 GO:0004748 ... F2I8X9 30224458
    459320 6ebo:D (1.58) BS01 CA 1.17.4.1 GO:0004748 ... F2I8X9 30224458
    459321 6ebp:A (1.59) BS01 CA 1.17.4.1 GO:0004748 ... F2I8X9 30224458
    459322 6ebp:B (1.59) BS01 CA 1.17.4.1 GO:0004748 ... F2I8X9 30224458
    459323 6ebp:C (1.59) BS01 CA 1.17.4.1 GO:0004748 ... F2I8X9 30224458
    459324 6ebp:D (1.59) BS01 CA 1.17.4.1 GO:0004748 ... F2I8X9 30224458
    459325 6ebq:A (1.95) BS01 FMN ? GO:0000166 ... F2I8Y0 30224458
    459326 6ebq:B (1.95) BS01 FMN ? GO:0000166 ... F2I8Y0 30224458
    459327 6ebr:A (1.816) BS01 BEF ? GO:0000160 ... A0A0H2UQ68 N/A
    459328 6ebr:A (1.816) BS02 MN ? GO:0000160 ... A0A0H2UQ68 N/A
    459329 6ebs:A (2.05) BS01 FMN 1.3.98.1 GO:0000166 ... Q4QEW7 N/A
    459330 6ebs:B (2.05) BS01 FMN 1.3.98.1 GO:0000166 ... Q4QEW7 N/A
    459331 6ebv:A (3.0) BS01 ADP 2.7.1.33 GO:0004594 ... Q2FWC7 N/A
    459332 6ebv:A (3.0) BS02 27Q 2.7.1.33 GO:0004594 ... Q2FWC7 N/A
    459333 6ebv:A (3.0) BS03 27Q 2.7.1.33 GO:0004594 ... Q2FWC7 N/A
    459334 6ebv:B (3.0) BS01 ADP 2.7.1.33 GO:0004594 ... Q2FWC7 N/A
    459335 6ebv:B (3.0) BS02 ADP 2.7.1.33 GO:0004594 ... Q2FWC7 N/A
    459336 6ebv:B (3.0) BS03 27Q 2.7.1.33 GO:0004594 ... Q2FWC7 N/A
    459337 6ebv:B (3.0) BS04 27Q 2.7.1.33 GO:0004594 ... Q2FWC7 N/A
    459338 6ebv:C (3.0) BS01 27Q 2.7.1.33 GO:0004594 ... Q2FWC7 N/A
    459339 6ebv:C (3.0) BS02 ADP 2.7.1.33 GO:0004594 ... Q2FWC7 N/A
    459340 6ebv:C (3.0) BS03 27Q 2.7.1.33 GO:0004594 ... Q2FWC7 N/A
    459341 6ebv:D (3.0) BS01 27Q 2.7.1.33 GO:0004594 ... Q2FWC7 N/A
    459342 6ebv:D (3.0) BS02 ADP 2.7.1.33 GO:0004594 ... Q2FWC7 N/A
    459343 6ebv:D (3.0) BS03 27Q 2.7.1.33 GO:0004594 ... Q2FWC7 N/A
    459344 6ebw:A (2.455) BS01 J3Y 2.7.10.1 GO:0004672 ... Q9UM73 31009559 MOAD: ic50=2.5nM
    459345 6ebx:B (1.7) BS01 SCN ? GO:0005576 ... Q90VW1 1418823
    459346 6ebz:A (1.66) BS01 CA 1.17.4.1 GO:0004748 ... F2I8X9 30224458
    459347 6ebz:B (1.66) BS01 CA 1.17.4.1 GO:0004748 ... F2I8X9 30224458
    459348 6ebz:C (1.66) BS01 CA 1.17.4.1 GO:0004748 ... F2I8X9 30224458
    459349 6ebz:D (1.66) BS01 CA 1.17.4.1 GO:0004748 ... F2I8X9 30224458
    459350 6ec0:B (2.983) BS01 CO ? GO:0005198 ... P13645 31036554
    459351 6ec8:A (2.148) BS01 J4G ? N/A D6Y502 31409709
    459352 6ecd:A (1.9) BS01 peptide 3.1.2.- GO:0009058 ... Q1PSF3 30542153
    459353 6ece:A (2.0) BS01 peptide 3.1.2.- GO:0009058 ... Q1PSF3 30542153
    459354 6ece:B (2.0) BS01 peptide 3.1.2.- GO:0009058 ... Q1PSF3 30542153
    459355 6ecf:A (2.5) BS01 peptide 3.1.2.- GO:0009058 ... Q1PSF3 30542153
    459356 6ecf:B (2.5) BS01 peptide 3.1.2.- GO:0009058 ... Q1PSF3 30542153
    459357 6ecf:C (2.5) BS01 peptide 3.1.2.- GO:0009058 ... Q1PSF3 30542153
    459358 6ecf:D (2.5) BS01 peptide 3.1.2.- GO:0009058 ... Q1PSF3 30542153
    459359 6ecf:E (2.5) BS01 peptide 3.1.2.- GO:0009058 ... Q1PSF3 30542153
    459360 6ecf:F (2.5) BS01 peptide 3.1.2.- GO:0009058 ... Q1PSF3 30542153
    459361 6ecg:A (2.27) BS01 PM9 4.1.99.2 GO:0006520 ... P31013 30260636
    459362 6ech:A (2.19) BS01 FBP 2.7.1.40 GO:0000287 ... P12928 31825824
    459363 6ech:A (2.19) BS02 MG 2.7.1.40 GO:0000287 ... P12928 31825824
    459364 6ech:A (2.19) BS03 MG 2.7.1.40 GO:0000287 ... P12928 31825824
    459365 6ech:A (2.19) BS04 ATP 2.7.1.40 GO:0000287 ... P12928 31825824
    459366 6ech:A (2.19) BS05 OXL 2.7.1.40 GO:0000287 ... P12928 31825824
    459367 6ech:B (2.19) BS01 FBP 2.7.1.40 GO:0000287 ... P12928 31825824
    459368 6ech:B (2.19) BS02 MG 2.7.1.40 GO:0000287 ... P12928 31825824
    459369 6ech:B (2.19) BS03 MG 2.7.1.40 GO:0000287 ... P12928 31825824
    459370 6ech:B (2.19) BS04 ATP 2.7.1.40 GO:0000287 ... P12928 31825824
    459371 6ech:B (2.19) BS05 OXL 2.7.1.40 GO:0000287 ... P12928 31825824
    459372 6ech:C (2.19) BS01 FBP 2.7.1.40 GO:0000287 ... P12928 31825824
    459373 6ech:C (2.19) BS02 MG 2.7.1.40 GO:0000287 ... P12928 31825824
    459374 6ech:C (2.19) BS03 MG 2.7.1.40 GO:0000287 ... P12928 31825824
    459375 6ech:C (2.19) BS04 OXL 2.7.1.40 GO:0000287 ... P12928 31825824
    459376 6ech:D (2.19) BS01 FBP 2.7.1.40 GO:0000287 ... P12928 31825824
    459377 6ech:D (2.19) BS02 MG 2.7.1.40 GO:0000287 ... P12928 31825824
    459378 6ech:D (2.19) BS03 MG 2.7.1.40 GO:0000287 ... P12928 31825824
    459379 6ech:D (2.19) BS04 ATP 2.7.1.40 GO:0000287 ... P12928 31825824
    459380 6ech:D (2.19) BS05 OXL 2.7.1.40 GO:0000287 ... P12928 31825824
    459381 6eci:A (2.69) BS01 FAD ? GO:0000166 ... I7GF07 30567740
    459382 6eci:A (2.69) BS02 FAD ? GO:0000166 ... I7GF07 30567740
    459383 6eci:B (2.69) BS01 FAD ? GO:0000166 ... I7GF07 30567740
    459384 6eci:B (2.69) BS02 FAD ? GO:0000166 ... I7GF07 30567740
    459385 6eci:C (2.69) BS01 FAD ? GO:0000166 ... I7GF07 30567740
    459386 6eci:C (2.69) BS02 FAD ? GO:0000166 ... I7GF07 30567740
    459387 6eci:D (2.69) BS01 FAD ? GO:0000166 ... I7GF07 30567740
    459388 6eci:D (2.69) BS02 FAD ? GO:0000166 ... I7GF07 30567740
    459389 6eci:E (2.69) BS01 FAD ? GO:0000166 ... I7GF07 30567740
    459390 6eci:E (2.69) BS02 FAD ? GO:0000166 ... I7GF07 30567740
    459391 6eci:F (2.69) BS01 FAD ? GO:0000166 ... I7GF07 30567740
    459392 6eci:F (2.69) BS02 FAD ? GO:0000166 ... I7GF07 30567740
    459393 6eci:G (2.69) BS01 FAD ? GO:0000166 ... I7GF07 30567740
    459394 6eci:G (2.69) BS02 FAD ? GO:0000166 ... I7GF07 30567740
    459395 6eci:H (2.69) BS01 FAD ? GO:0000166 ... I7GF07 30567740
    459396 6eci:H (2.69) BS02 FAD ? GO:0000166 ... I7GF07 30567740
    459397 6eci:I (2.69) BS01 FAD ? GO:0000166 ... I7GF07 30567740
    459398 6eci:J (2.69) BS01 FAD ? GO:0000166 ... I7GF07 30567740
    459399 6eci:K (2.69) BS01 FAD ? GO:0000166 ... I7GF07 30567740
    459400 6eci:L (2.69) BS01 FAD ? GO:0000166 ... I7GF07 30567740

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).