SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    459601 6eeb:A (1.96) BS04 CA ? GO:0000086 ... P0DP23 31337679
    459602 6eeb:A (1.96) BS05 CA ? GO:0000086 ... P0DP23 31337679
    459603 6eeb:A (1.96) BS06 ZN ? GO:0000086 ... P0DP23 31337679
    459604 6eec:C (3.55) BS01 dna 2.7.7.6 GO:0000428 ... P9WGY9 30626968
    459605 6eec:C (3.55) BS02 C0L 2.7.7.6 GO:0000428 ... P9WGY9 30626968
    459606 6eec:D (3.55) BS01 dna 2.7.7.6 GO:0000287 ... P9WGY7 30626968
    459607 6eec:D (3.55) BS02 dna 2.7.7.6 GO:0000287 ... P9WGY7 30626968
    459608 6eec:D (3.55) BS03 C0L 2.7.7.6 GO:0000287 ... P9WGY7 30626968
    459609 6eec:D (3.55) BS04 ZN 2.7.7.6 GO:0000287 ... P9WGY7 30626968
    459610 6eec:D (3.55) BS05 ZN 2.7.7.6 GO:0000287 ... P9WGY7 30626968
    459611 6eec:D (3.55) BS06 MG 2.7.7.6 GO:0000287 ... P9WGY7 30626968
    459612 6eec:F (3.55) BS01 dna ? GO:0003677 ... P9WGI1 30626968
    459613 6eec:F (3.55) BS02 dna ? GO:0003677 ... P9WGI1 30626968
    459614 6eec:M (3.55) BS01 dna ? GO:0005515 ... P9WJG3 30626968
    459615 6eec:M (3.55) BS02 dna ? GO:0005515 ... P9WJG3 30626968
    459616 6eed:A (1.5) BS01 ZN 3.4.11.- GO:0006508 ... O96935 30537832
    459617 6eed:A (1.5) BS02 J6A 3.4.11.- GO:0006508 ... O96935 30537832 MOAD: Ki=812nM
    459618 6eee:A (2.3) BS01 J4V 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832 MOAD: Ki=28.9nM
    459619 6eee:A (2.3) BS02 CO3 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459620 6eee:A (2.3) BS03 ZN 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459621 6eee:B (2.3) BS01 J4V 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832 MOAD: Ki=28.9nM
    459622 6eee:B (2.3) BS02 CO3 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459623 6eee:B (2.3) BS03 ZN 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459624 6eee:C (2.3) BS01 J4V 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832 MOAD: Ki=28.9nM
    459625 6eee:C (2.3) BS02 CO3 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459626 6eee:C (2.3) BS03 ZN 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459627 6eee:D (2.3) BS01 J4V 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832 MOAD: Ki=28.9nM
    459628 6eee:D (2.3) BS02 CO3 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459629 6eee:D (2.3) BS03 ZN 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459630 6eee:E (2.3) BS01 J4V 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832 MOAD: Ki=28.9nM
    459631 6eee:E (2.3) BS02 CO3 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459632 6eee:E (2.3) BS03 ZN 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459633 6eee:F (2.3) BS01 J4V 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832 MOAD: Ki=28.9nM
    459634 6eee:F (2.3) BS02 CO3 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459635 6eee:F (2.3) BS03 ZN 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459636 6eee:G (2.3) BS01 J4V 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832 MOAD: Ki=28.9nM
    459637 6eee:G (2.3) BS02 CO3 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459638 6eee:G (2.3) BS03 ZN 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459639 6eee:H (2.3) BS01 J4V 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832 MOAD: Ki=28.9nM
    459640 6eee:H (2.3) BS02 CO3 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459641 6eee:H (2.3) BS03 ZN 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459642 6eee:I (2.3) BS01 J4V 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832 MOAD: Ki=28.9nM
    459643 6eee:I (2.3) BS02 CO3 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459644 6eee:I (2.3) BS03 ZN 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459645 6eee:J (2.3) BS01 J4V 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832 MOAD: Ki=28.9nM
    459646 6eee:J (2.3) BS02 CO3 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459647 6eee:J (2.3) BS03 ZN 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459648 6eee:K (2.3) BS01 J4V 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832 MOAD: Ki=28.9nM
    459649 6eee:K (2.3) BS02 CO3 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459650 6eee:K (2.3) BS03 ZN 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459651 6eee:L (2.3) BS01 J4V 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832 MOAD: Ki=28.9nM
    459652 6eee:L (2.3) BS02 CO3 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459653 6eee:L (2.3) BS03 ZN 3.4.11.1 GO:0005737 ... A0A0L7KHE6 30537832
    459654 6eeg:A (1.95) BS01 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    459655 6eeg:A (1.95) BS02 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    459656 6eeh:A (1.629) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 30433782
    459657 6eeh:A (1.629) BS02 J4D 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 30433782 MOAD: Ki=0.29uM
    459658 6eeh:A (1.629) BS03 J4D 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 30433782 MOAD: Ki=0.29uM
    459659 6eeh:A (1.629) BS04 J4D 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 30433782 MOAD: Ki=0.29uM
    459660 6eei:A (1.99001) BS01 PHE 4.1.1.107
    4.1.1.109
    GO:0006520 ... Q8RY79 32371491
    459661 6eei:B (1.99001) BS01 PHE 4.1.1.107
    4.1.1.109
    GO:0006520 ... Q8RY79 32371491
    459662 6eej:A (1.892) BS01 J6S ? GO:0016829 ... D7C0E5 31524380
    459663 6eej:B (1.892) BS01 J6S ? GO:0016829 ... D7C0E5 31524380
    459664 6eej:C (1.892) BS01 J6S ? GO:0016829 ... D7C0E5 31524380
    459665 6eej:D (1.892) BS01 J6S ? GO:0016829 ... D7C0E5 31524380
    459666 6eem:A (2.61001) BS01 0PR 4.1.1.25 GO:0004837 ... O82415 32371491
    459667 6eem:A (2.61001) BS02 TYR 4.1.1.25 GO:0004837 ... O82415 32371491
    459668 6eem:B (2.61001) BS01 0PR 4.1.1.25 GO:0004837 ... O82415 32371491
    459669 6eem:B (2.61001) BS02 TYR 4.1.1.25 GO:0004837 ... O82415 32371491
    459670 6een:A (2.01) BS01 rna N/A N/A N/A N/A
    459671 6een:A (2.01) BS02 rna N/A N/A N/A N/A
    459672 6een:A (2.01) BS03 rna N/A N/A N/A N/A
    459673 6een:A (2.01) BS04 rna N/A N/A N/A N/A
    459674 6een:B (2.01) BS01 rna N/A N/A N/A N/A
    459675 6een:B (2.01) BS02 rna N/A N/A N/A N/A
    459676 6een:B (2.01) BS03 rna N/A N/A N/A N/A
    459677 6een:B (2.01) BS04 rna N/A N/A N/A N/A
    459678 6een:C (2.01) BS01 rna N/A N/A N/A N/A
    459679 6een:C (2.01) BS02 rna N/A N/A N/A N/A
    459680 6een:C (2.01) BS03 rna N/A N/A N/A N/A
    459681 6een:C (2.01) BS04 rna N/A N/A N/A N/A
    459682 6een:D (2.01) BS01 rna N/A N/A N/A N/A
    459683 6een:D (2.01) BS02 rna N/A N/A N/A N/A
    459684 6een:D (2.01) BS03 rna N/A N/A N/A N/A
    459685 6een:D (2.01) BS04 rna N/A N/A N/A N/A
    459686 6eeo:A (1.719) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 30433782
    459687 6eeo:A (1.719) BS02 J6V 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 30433782 MOAD: Ki=0.37uM
    459688 6eer:A (1.82) BS01 MG ? GO:0046872 ... A0A161XU12 30605596
    459689 6eer:B (1.82) BS01 MG ? GO:0046872 ... A0A161XU12 30605596
    459690 6eer:C (1.82) BS01 MG ? GO:0046872 ... A0A161XU12 30605596
    459691 6eer:D (1.82) BS01 MG ? GO:0046872 ... A0A161XU12 30605596
    459692 6eet:A (3.23) BS01 MAN ? GO:0005509 ... Q99PJ1 32963095
    459693 6eet:A (3.23) BS02 MAN ? GO:0005509 ... Q99PJ1 32963095
    459694 6eet:A (3.23) BS03 MAN ? GO:0005509 ... Q99PJ1 32963095
    459695 6eet:A (3.23) BS04 CA ? GO:0005509 ... Q99PJ1 32963095
    459696 6eet:A (3.23) BS05 CA ? GO:0005509 ... Q99PJ1 32963095
    459697 6eet:A (3.23) BS06 CA ? GO:0005509 ... Q99PJ1 32963095
    459698 6eet:A (3.23) BS07 CA ? GO:0005509 ... Q99PJ1 32963095
    459699 6eev:A (1.49) BS01 GLC 1.1.1.88 GO:0000166 ... A9BQX8 30199631
    459700 6eev:A (1.49) BS02 GLC 1.1.1.88 GO:0000166 ... A9BQX8 30199631
    459701 6eev:A (1.49) BS03 MEV 1.1.1.88 GO:0000166 ... A9BQX8 30199631
    459702 6eew:A (2.05002) BS01 TRP 4.1.1.28 GO:0004058 ... P17770 32371491
    459703 6eew:A (2.05002) BS02 TRP 4.1.1.28 GO:0004058 ... P17770 32371491
    459704 6eew:B (2.05002) BS01 TRP 4.1.1.28 GO:0004058 ... P17770 32371491
    459705 6eew:C (2.05002) BS01 TRP 4.1.1.28 GO:0004058 ... P17770 32371491
    459706 6eew:D (2.05002) BS01 TRP 4.1.1.28 GO:0004058 ... P17770 32371491
    459707 6ef0:H (4.43) BS01 ADP ? GO:0005524 ... P33299 30309908
    459708 6ef0:I (4.43) BS01 peptide ? GO:0005524 ... P40327 30309908
    459709 6ef0:I (4.43) BS02 ATP ? GO:0005524 ... P40327 30309908
    459710 6ef0:J (4.43) BS01 ATP ? GO:0005524 ... Q01939 30309908
    459711 6ef0:J (4.43) BS02 ATP ? GO:0005524 ... Q01939 30309908
    459712 6ef0:K (4.43) BS01 ATP ? GO:0005524 ... P33298 30309908
    459713 6ef0:K (4.43) BS02 ATP ? GO:0005524 ... P33298 30309908
    459714 6ef0:L (4.43) BS01 peptide ? GO:0005524 ... P53549 30309908
    459715 6ef0:L (4.43) BS02 ATP ? GO:0005524 ... P53549 30309908
    459716 6ef0:L (4.43) BS03 ADP ? GO:0005524 ... P53549 30309908
    459717 6ef0:M (4.43) BS01 ADP ? GO:0005524 ... P33297 30309908
    459718 6ef1:H (4.73) BS01 ATP ? GO:0005524 ... P33299 30309908
    459719 6ef1:I (4.73) BS01 ATP ? GO:0005524 ... P40327 30309908
    459720 6ef1:J (4.73) BS01 ATP ? GO:0005524 ... Q01939 30309908
    459721 6ef1:J (4.73) BS02 ATP ? GO:0005524 ... Q01939 30309908
    459722 6ef1:K (4.73) BS01 peptide ? GO:0005524 ... P33298 30309908
    459723 6ef1:K (4.73) BS02 ATP ? GO:0005524 ... P33298 30309908
    459724 6ef1:L (4.73) BS01 peptide ? GO:0005524 ... P53549 30309908
    459725 6ef1:L (4.73) BS02 ADP ? GO:0005524 ... P53549 30309908
    459726 6ef1:M (4.73) BS01 ADP ? GO:0005524 ... P33297 30309908
    459727 6ef2:H (4.27) BS01 ATP ? GO:0005524 ... P33299 30309908
    459728 6ef2:I (4.27) BS01 peptide ? GO:0005524 ... P40327 30309908
    459729 6ef2:I (4.27) BS02 ATP ? GO:0005524 ... P40327 30309908
    459730 6ef2:I (4.27) BS03 ATP ? GO:0005524 ... P40327 30309908
    459731 6ef2:J (4.27) BS01 ATP ? GO:0005524 ... Q01939 30309908
    459732 6ef2:K (4.27) BS01 peptide ? GO:0005524 ... P33298 30309908
    459733 6ef2:K (4.27) BS02 ADP ? GO:0005524 ... P33298 30309908
    459734 6ef2:L (4.27) BS01 peptide ? GO:0005524 ... P53549 30309908
    459735 6ef2:L (4.27) BS02 ADP ? GO:0005524 ... P53549 30309908
    459736 6ef2:M (4.27) BS01 ATP ? GO:0005524 ... P33297 30309908
    459737 6ef3:1 (4.17) BS01 peptide 3.4.25.1 GO:0000502 ... P38624 30309908
    459738 6ef3:2 (4.17) BS01 peptide 3.4.25.1 GO:0000502 ... P25043 30309908
    459739 6ef3:H (4.17) BS01 ATP ? GO:0000502 ... P33299 30309908
    459740 6ef3:I (4.17) BS01 ATP ? GO:0000502 ... P40327 30309908
    459741 6ef3:I (4.17) BS02 ATP ? GO:0000502 ... P40327 30309908
    459742 6ef3:J (4.17) BS01 ATP ? GO:0000502 ... Q01939 30309908
    459743 6ef3:K (4.17) BS01 ADP ? GO:0000502 ... P33298 30309908
    459744 6ef3:L (4.17) BS01 ADP ? GO:0000502 ... P53549 30309908
    459745 6ef3:M (4.17) BS01 ATP ? GO:0000502 ... P33297 30309908
    459746 6ef5:A (2.44) BS01 peptide ? GO:0000122 ... P63104 N/A
    459747 6ef5:B (2.44) BS01 peptide ? GO:0000122 ... P63104 N/A
    459748 6ef5:C (2.44) BS01 peptide ? GO:0000122 ... P63104 N/A
    459749 6ef5:D (2.44) BS01 peptide ? GO:0000122 ... P63104 N/A
    459750 6ef6:A (1.35) BS01 JFN ? GO:0004413 ... A0QP47 30361441
    459751 6ef7:A (1.03) BS01 CA ? N/A Q939N5 35585145
    459752 6ef8:A (3.7) BS01 HEC ? GO:0009055 ... Q74A86 30951668
    459753 6ef8:A (3.7) BS02 HEC ? GO:0009055 ... Q74A86 30951668
    459754 6ef8:A (3.7) BS03 HEC ? GO:0009055 ... Q74A86 30951668
    459755 6ef8:A (3.7) BS04 HEC ? GO:0009055 ... Q74A86 30951668
    459756 6ef8:A (3.7) BS05 HEC ? GO:0009055 ... Q74A86 30951668
    459757 6ef8:A (3.7) BS06 HEC ? GO:0009055 ... Q74A86 30951668
    459758 6ef8:A (3.7) BS07 HEC ? GO:0009055 ... Q74A86 30951668
    459759 6ef8:A (3.7) BS08 HEC ? GO:0009055 ... Q74A86 30951668
    459760 6ef8:A (3.7) BS09 HEC ? GO:0009055 ... Q74A86 30951668
    459761 6ef8:B (3.7) BS01 HEC ? GO:0009055 ... Q74A86 30951668
    459762 6ef8:B (3.7) BS02 HEC ? GO:0009055 ... Q74A86 30951668
    459763 6ef8:B (3.7) BS03 HEC ? GO:0009055 ... Q74A86 30951668
    459764 6ef8:B (3.7) BS04 HEC ? GO:0009055 ... Q74A86 30951668
    459765 6ef8:B (3.7) BS05 HEC ? GO:0009055 ... Q74A86 30951668
    459766 6ef8:B (3.7) BS06 HEC ? GO:0009055 ... Q74A86 30951668
    459767 6ef8:B (3.7) BS07 HEC ? GO:0009055 ... Q74A86 30951668
    459768 6ef8:B (3.7) BS08 HEC ? GO:0009055 ... Q74A86 30951668
    459769 6ef8:B (3.7) BS09 HEC ? GO:0009055 ... Q74A86 30951668
    459770 6ef8:C (3.7) BS01 HEC ? GO:0009055 ... Q74A86 30951668
    459771 6ef8:C (3.7) BS02 HEC ? GO:0009055 ... Q74A86 30951668
    459772 6ef8:C (3.7) BS03 HEC ? GO:0009055 ... Q74A86 30951668
    459773 6ef8:C (3.7) BS04 HEC ? GO:0009055 ... Q74A86 30951668
    459774 6ef8:C (3.7) BS05 HEC ? GO:0009055 ... Q74A86 30951668
    459775 6ef8:C (3.7) BS06 HEC ? GO:0009055 ... Q74A86 30951668
    459776 6ef8:C (3.7) BS07 HEC ? GO:0009055 ... Q74A86 30951668
    459777 6ef8:C (3.7) BS08 HEC ? GO:0009055 ... Q74A86 30951668
    459778 6ef8:C (3.7) BS09 HEC ? GO:0009055 ... Q74A86 30951668
    459779 6ef8:D (3.7) BS01 HEC ? GO:0009055 ... Q74A86 30951668
    459780 6ef8:D (3.7) BS02 HEC ? GO:0009055 ... Q74A86 30951668
    459781 6ef8:D (3.7) BS03 HEC ? GO:0009055 ... Q74A86 30951668
    459782 6ef8:D (3.7) BS04 HEC ? GO:0009055 ... Q74A86 30951668
    459783 6ef8:D (3.7) BS05 HEC ? GO:0009055 ... Q74A86 30951668
    459784 6ef8:D (3.7) BS06 HEC ? GO:0009055 ... Q74A86 30951668
    459785 6ef8:D (3.7) BS07 HEC ? GO:0009055 ... Q74A86 30951668
    459786 6ef8:D (3.7) BS08 HEC ? GO:0009055 ... Q74A86 30951668
    459787 6ef8:D (3.7) BS09 HEC ? GO:0009055 ... Q74A86 30951668
    459788 6ef8:E (3.7) BS01 HEC ? GO:0009055 ... Q74A86 30951668
    459789 6ef8:E (3.7) BS02 HEC ? GO:0009055 ... Q74A86 30951668
    459790 6ef8:E (3.7) BS03 HEC ? GO:0009055 ... Q74A86 30951668
    459791 6ef8:E (3.7) BS04 HEC ? GO:0009055 ... Q74A86 30951668
    459792 6ef8:E (3.7) BS05 HEC ? GO:0009055 ... Q74A86 30951668
    459793 6ef8:E (3.7) BS06 HEC ? GO:0009055 ... Q74A86 30951668
    459794 6ef8:E (3.7) BS07 HEC ? GO:0009055 ... Q74A86 30951668
    459795 6ef8:E (3.7) BS08 HEC ? GO:0009055 ... Q74A86 30951668
    459796 6ef8:E (3.7) BS09 HEC ? GO:0009055 ... Q74A86 30951668
    459797 6ef8:F (3.7) BS01 HEC ? GO:0009055 ... Q74A86 30951668
    459798 6ef8:F (3.7) BS02 HEC ? GO:0009055 ... Q74A86 30951668
    459799 6ef8:F (3.7) BS03 HEC ? GO:0009055 ... Q74A86 30951668
    459800 6ef8:F (3.7) BS04 HEC ? GO:0009055 ... Q74A86 30951668

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).