SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    459801 6ef8:F (3.7) BS05 HEC ? GO:0009055 ... Q74A86 30951668
    459802 6ef8:F (3.7) BS06 HEC ? GO:0009055 ... Q74A86 30951668
    459803 6ef8:F (3.7) BS07 HEC ? GO:0009055 ... Q74A86 30951668
    459804 6ef8:F (3.7) BS08 HEC ? GO:0009055 ... Q74A86 30951668
    459805 6ef8:G (3.7) BS01 HEC ? GO:0009055 ... Q74A86 30951668
    459806 6ef8:G (3.7) BS02 HEC ? GO:0009055 ... Q74A86 30951668
    459807 6ef8:G (3.7) BS03 HEC ? GO:0009055 ... Q74A86 30951668
    459808 6ef8:G (3.7) BS04 HEC ? GO:0009055 ... Q74A86 30951668
    459809 6ef8:G (3.7) BS05 HEC ? GO:0009055 ... Q74A86 30951668
    459810 6ef8:G (3.7) BS06 HEC ? GO:0009055 ... Q74A86 30951668
    459811 6ef8:G (3.7) BS07 HEC ? GO:0009055 ... Q74A86 30951668
    459812 6efa:A (1.6) BS01 CA ? N/A Q939N5 35585145
    459813 6efb:A (1.9) BS01 CA N/A N/A N/A 35585145
    459814 6efc:A (1.4) BS01 CA ? N/A A8AWU7 35585145
    459815 6efd:A (1.85) BS01 GAL ? N/A A8AWU7 35585145
    459816 6efd:A (1.85) BS02 SIA ? N/A A8AWU7 35585145
    459817 6eff:A (1.6) BS01 CA N/A N/A N/A 35585145
    459818 6eff:A (1.6) BS02 CA N/A N/A N/A 35585145
    459819 6eff:B (1.6) BS01 CA N/A N/A N/A 35585145
    459820 6eff:B (1.6) BS02 CA N/A N/A N/A 35585145
    459821 6eff:C (1.6) BS01 CA N/A N/A N/A 35585145
    459822 6eff:C (1.6) BS02 CA N/A N/A N/A 35585145
    459823 6eff:D (1.6) BS01 CA N/A N/A N/A 35585145
    459824 6eff:D (1.6) BS02 CA N/A N/A N/A 35585145
    459825 6efg:A (2.04) BS01 TPP 4.1.1.1 GO:0000287 ... Q12629 N/A
    459826 6efg:A (2.04) BS02 MG 4.1.1.1 GO:0000287 ... Q12629 N/A
    459827 6efg:A (2.04) BS03 TPP 4.1.1.1 GO:0000287 ... Q12629 N/A
    459828 6efg:B (2.04) BS01 TPP 4.1.1.1 GO:0000287 ... Q12629 N/A
    459829 6efg:B (2.04) BS02 TPP 4.1.1.1 GO:0000287 ... Q12629 N/A
    459830 6efg:B (2.04) BS03 MG 4.1.1.1 GO:0000287 ... Q12629 N/A
    459831 6efg:D (2.04) BS01 TPP 4.1.1.1 GO:0000287 ... Q12629 N/A
    459832 6efg:D (2.04) BS02 MG 4.1.1.1 GO:0000287 ... Q12629 N/A
    459833 6efg:D (2.04) BS03 TPP 4.1.1.1 GO:0000287 ... Q12629 N/A
    459834 6efg:E (2.04) BS01 TPP 4.1.1.1 GO:0000287 ... Q12629 N/A
    459835 6efg:E (2.04) BS02 TPP 4.1.1.1 GO:0000287 ... Q12629 N/A
    459836 6efg:E (2.04) BS03 MG 4.1.1.1 GO:0000287 ... Q12629 N/A
    459837 6efh:A (2.99) BS01 PY0 4.1.1.1 GO:0000287 ... Q12629 N/A
    459838 6efh:A (2.99) BS02 TPP 4.1.1.1 GO:0000287 ... Q12629 N/A
    459839 6efh:A (2.99) BS03 MG 4.1.1.1 GO:0000287 ... Q12629 N/A
    459840 6efh:A (2.99) BS04 TPP 4.1.1.1 GO:0000287 ... Q12629 N/A
    459841 6efh:B (2.99) BS01 TPP 4.1.1.1 GO:0000287 ... Q12629 N/A
    459842 6efh:B (2.99) BS02 PY0 4.1.1.1 GO:0000287 ... Q12629 N/A
    459843 6efh:B (2.99) BS03 TPP 4.1.1.1 GO:0000287 ... Q12629 N/A
    459844 6efh:B (2.99) BS04 MG 4.1.1.1 GO:0000287 ... Q12629 N/A
    459845 6efi:A (1.715) BS01 CA ? N/A F0FS71 35585145
    459846 6efi:B (1.715) BS01 CA ? N/A F0FS71 35585145
    459847 6efj:A (1.65) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 30942078
    459848 6efj:A (1.65) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 30942078
    459849 6efj:A (1.65) BS03 O5E 3.5.2.6 GO:0008270 ... C7C422 30942078 MOAD: Ki=477uM
    459850 6efk:A (1.5) BS01 peptide 2.3.2.27 N/A Q9UNE7 31320752
    459851 6efk:B (1.5) BS01 peptide 2.3.2.27 N/A Q9UNE7 31320752
    459852 6efn:A (1.291) BS01 SAM 1.21.98.- GO:0003824 ... O31423 N/A
    459853 6efn:A (1.291) BS02 SF4 1.21.98.- GO:0003824 ... O31423 N/A
    459854 6efn:A (1.291) BS03 FES 1.21.98.- GO:0003824 ... O31423 N/A
    459855 6efv:A (2.341) BS01 FAD 1.8.1.2 GO:0000103 ... W8SX42 30654136
    459856 6efv:A (2.341) BS02 FMN 1.8.1.2 GO:0000103 ... W8SX42 30654136
    459857 6efx:A (2.0) BS01 ANP 4.2.1.93 GO:0005524 ... J9VIT7 N/A
    459858 6eg0:B (2.9) BS01 FUC ? N/A Q9VMN9 30467080
    459859 6eg1:A (2.95) BS01 FUC ? N/A Q59DZ4 30467080
    459860 6eg1:B (2.95) BS01 FUC ? N/A Q9VMN6 30467080
    459861 6eg1:C (2.95) BS01 BU3 ? N/A Q59DZ4 30467080
    459862 6eg2:A (2.98) BS01 J7J 3.6.4.- GO:0005515 ... P0AEX9
    P51531
    30339381
    459863 6eg3:A (2.84) BS01 J7G 3.6.4.- GO:0005515 ... P0AEX9
    P51531
    30339381
    459864 6eg5:A (2.45) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    459865 6eg5:A (2.45) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    459866 6eg5:B (2.45) BS01 GDP ? GO:0000226 ... Q6B856 N/A
    459867 6eg5:B (2.45) BS02 J7S ? GO:0000226 ... Q6B856 N/A
    459868 6eg5:C (2.45) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    459869 6eg5:C (2.45) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    459870 6eg5:C (2.45) BS03 J7S 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    459871 6eg5:D (2.45) BS01 GTP ? GO:0000226 ... Q6B856 N/A
    459872 6eg5:D (2.45) BS02 J7S ? GO:0000226 ... Q6B856 N/A
    459873 6eg5:F (2.45) BS01 ACP N/A GO:0036211 ... N/A N/A
    459874 6eg7:A (3.0) BS01 I3C ? GO:0004519 ... Q5D6Y4 30395313
    459875 6eg7:A (3.0) BS02 I3C ? GO:0004519 ... Q5D6Y4 30395313
    459876 6eg7:A (3.0) BS03 I3C ? GO:0004519 ... Q5D6Y4 30395313
    459877 6eg7:B (3.0) BS01 I3C ? GO:0004519 ... Q5D6Y4 30395313
    459878 6eg7:B (3.0) BS02 I3C ? GO:0004519 ... Q5D6Y4 30395313
    459879 6eg7:B (3.0) BS03 I3C ? GO:0004519 ... Q5D6Y4 30395313
    459880 6eg8:I (2.8) BS01 GDP ? GO:0002862 ... P63092 31080070
    459881 6eg8:I (2.8) BS02 MG ? GO:0002862 ... P63092 31080070
    459882 6eg8:J (2.8) BS01 GDP ? GO:0002862 ... P63092 31080070
    459883 6eg8:J (2.8) BS02 MG ? GO:0002862 ... P63092 31080070
    459884 6eg8:K (2.8) BS01 GDP ? GO:0002862 ... P63092 31080070
    459885 6eg8:K (2.8) BS02 MG ? GO:0002862 ... P63092 31080070
    459886 6eg8:L (2.8) BS01 GDP ? GO:0002862 ... P63092 31080070
    459887 6eg8:L (2.8) BS02 MG ? GO:0002862 ... P63092 31080070
    459888 6eg9:A (2.414) BS01 0LI 2.7.11.1 GO:0000287 ... Q9NWZ3 30679311 MOAD: ic50=66.9nM
    459889 6eg9:B (2.414) BS01 0LI 2.7.11.1 GO:0000287 ... Q9NWZ3 30679311 MOAD: ic50=66.9nM
    459890 6eg9:B (2.414) BS02 CO 2.7.11.1 GO:0000287 ... Q9NWZ3 30679311
    459891 6ega:A (2.512) BS01 J8A 2.7.11.1 GO:0000287 ... Q9NWZ3 30679311
    459892 6ega:B (2.512) BS01 J8A 2.7.11.1 GO:0000287 ... Q9NWZ3 30679311
    459893 6ega:B (2.512) BS02 CO 2.7.11.1 GO:0000287 ... Q9NWZ3 30679311
    459894 6egd:A (2.1) BS01 J87 2.7.11.1 GO:0000287 ... Q9NWZ3 30679311
    459895 6egd:D (2.1) BS01 J87 2.7.11.1 GO:0000287 ... Q9NWZ3 30679311
    459896 6ege:A (1.401) BS01 DL1 2.7.11.1 GO:0000287 ... Q9NWZ3 30679311
    459897 6ege:D (1.401) BS01 DL1 2.7.11.1 GO:0000287 ... Q9NWZ3 30679311
    459898 6egf:B (2.61) BS01 ANP 2.7.11.1 GO:0000287 ... Q9NWZ3 30679311
    459899 6egf:B (2.61) BS02 MG 2.7.11.1 GO:0000287 ... Q9NWZ3 30679311
    459900 6egl:A (1.4) BS01 ZN N/A N/A N/A 30861211
    459901 6egm:A (1.84) BS01 ZN N/A N/A N/A 30861211
    459902 6egn:B (1.84) BS01 ZN N/A N/A N/A 30861211
    459903 6egn:C (1.84) BS01 ZN N/A N/A N/A 30861211
    459904 6egn:C (1.84) BS02 ZN N/A N/A N/A 30861211
    459905 6ego:A (1.93) BS01 ZN N/A N/A N/A 30861211
    459906 6egp:A (1.77) BS01 ZN N/A N/A N/A N/A
    459907 6egr:A (1.45) BS01 PLP 4.4.1.11 GO:0005737 ... A0A0A5P8W7 30268810
    459908 6egs:A (2.7) BS01 MN 2.4.1.41 N/A Q10471 29601100
    459909 6egs:A (2.7) BS02 UD2 2.4.1.41 N/A Q10471 29601100
    459910 6egs:B (2.7) BS01 MN 2.4.1.41 N/A Q10471 29601100
    459911 6egs:B (2.7) BS02 UD2 2.4.1.41 N/A Q10471 29601100
    459912 6egu:A (2.3) BS01 43Y ? N/A P03518 29097548
    459913 6egu:B (2.3) BS01 43Y ? N/A P03518 29097548
    459914 6egu:C (2.3) BS01 43Y ? N/A P03518 29097548
    459915 6egv:A (3.18) BS01 peptide ? N/A Q9WCE9 29987012
    459916 6egv:B (3.18) BS01 peptide ? GO:0005198 ... Q6ITS8 29987012
    459917 6egv:C (3.18) BS01 peptide ? GO:0005198 ... A0A2I6HDZ6 29987012
    459918 6egw:A (1.74) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    459919 6egw:A (1.74) BS02 9LQ 2.7.11.11 GO:0000287 ... P25321 N/A
    459920 6egx:A (4.06) BS01 peptide ? N/A Q9WCE9 29987012
    459921 6egx:B (4.06) BS01 peptide ? GO:0005198 ... A0A223DN66 29987012
    459922 6egx:C (4.06) BS01 peptide ? GO:0005198 ... A0A2I6HDZ6 29987012
    459923 6egy:A (2.7) BS01 HEC ? GO:0005515 ... P00044 30445810
    459924 6egy:A (2.7) BS02 B4T ? GO:0005515 ... P00044 30445810
    459925 6egy:A (2.7) BS03 B4T ? GO:0005515 ... P00044 30445810
    459926 6egy:A (2.7) BS04 B4T ? GO:0005515 ... P00044 30445810
    459927 6egy:B (2.7) BS01 B4T ? GO:0005515 ... P00044 30445810
    459928 6egy:B (2.7) BS02 HEC ? GO:0005515 ... P00044 30445810
    459929 6egy:B (2.7) BS03 B4T ? GO:0005515 ... P00044 30445810
    459930 6egz:A (2.17) BS01 HEC ? GO:0005515 ... P00044 30445810
    459931 6egz:A (2.17) BS02 B4X ? GO:0005515 ... P00044 30445810
    459932 6egz:B (2.17) BS01 HEC ? GO:0005515 ... P00044 30445810
    459933 6egz:B (2.17) BS02 B4X ? GO:0005515 ... P00044 30445810
    459934 6egz:B (2.17) BS03 B4X ? GO:0005515 ... P00044 30445810
    459935 6eh1:A (7.25) BS01 peptide ? N/A Q9WCE9 29987012
    459936 6eh1:B (7.25) BS01 peptide ? GO:0005198 ... A0A223DN66 29987012
    459937 6eh2:A (1.76) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    459938 6eh2:A (1.76) BS02 AMP 2.7.11.11 GO:0000287 ... P25321 N/A
    459939 6eh3:A (1.95) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    459940 6eh3:A (1.95) BS02 B4Z 2.7.11.11 GO:0000287 ... P25321 N/A
    459941 6eha:A (2.0) BS01 HEM 1.14.14.18 GO:0001525 ... P09601 31276659
    459942 6eha:A (2.0) BS02 B5B 1.14.14.18 GO:0001525 ... P09601 31276659
    459943 6eha:B (2.0) BS01 HEM 1.14.14.18 GO:0001525 ... P09601 31276659
    459944 6eha:B (2.0) BS02 B5B 1.14.14.18 GO:0001525 ... P09601 31276659
    459945 6ehb:B (1.55) BS01 C8E ? GO:0006811 ... A5F934 29657131
    459946 6ehb:B (1.55) BS02 C8E ? GO:0006811 ... A5F934 29657131
    459947 6ehb:B (1.55) BS03 C8E ? GO:0006811 ... A5F934 29657131
    459948 6ehb:C (1.55) BS01 C8E ? GO:0006811 ... A5F934 29657131
    459949 6ehb:C (1.55) BS02 C8E ? GO:0006811 ... A5F934 29657131
    459950 6ehb:C (1.55) BS03 C8E ? GO:0006811 ... A5F934 29657131
    459951 6ehb:C (1.55) BS04 C8E ? GO:0006811 ... A5F934 29657131
    459952 6ehb:C (1.55) BS05 C8E ? GO:0006811 ... A5F934 29657131
    459953 6ehc:A (2.02) BS01 C8E ? GO:0006811 ... A5F934 29657131
    459954 6ehc:B (2.02) BS01 C8E ? GO:0006811 ... A5F934 29657131
    459955 6ehd:A (1.66) BS01 C8E ? GO:0009279 ... A0A0H3AME7 29657131
    459956 6ehd:A (1.66) BS02 C8E ? GO:0009279 ... A0A0H3AME7 29657131
    459957 6ehd:A (1.66) BS03 C8E ? GO:0009279 ... A0A0H3AME7 29657131
    459958 6ehd:A (1.66) BS04 C8E ? GO:0009279 ... A0A0H3AME7 29657131
    459959 6ehd:A (1.66) BS05 C8E ? GO:0009279 ... A0A0H3AME7 29657131
    459960 6ehe:A (2.312) BS01 C8E ? GO:0009279 ... A0A0H3AME7 29657131
    459961 6ehe:A (2.312) BS02 C8E ? GO:0009279 ... A0A0H3AME7 29657131
    459962 6ehe:A (2.312) BS03 C8E ? GO:0009279 ... A0A0H3AME7 29657131
    459963 6ehe:A (2.312) BS04 C8E ? GO:0009279 ... A0A0H3AME7 29657131
    459964 6ehf:A (2.72) BS01 CA ? GO:0009279 ... A0A0H3AME7 29657131
    459965 6ehh:A (2.4) BS01 2GE 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266 MOAD: ic50=32nM
    459966 6ehh:B (2.4) BS01 2GE 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266 MOAD: ic50=32nM
    459967 6ehh:B (2.4) BS02 CU 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266
    459968 6ehh:C (2.4) BS01 2GE 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266 MOAD: ic50=32nM
    459969 6ehh:C (2.4) BS02 CU 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266
    459970 6ehh:C (2.4) BS03 MG 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266
    459971 6ehh:D (2.4) BS01 2GE 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266 MOAD: ic50=32nM
    459972 6ehh:D (2.4) BS02 CU 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266
    459973 6ehj:A (2.1) BS01 MYA 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 32111831
    459974 6ehj:A (2.1) BS02 ASN 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 32111831
    459975 6ehj:A (2.1) BS03 SER 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 32111831
    459976 6ehj:A (2.1) BS04 LYS 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 32111831
    459977 6ehj:A (2.1) BS05 PRO 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 32111831
    459978 6ehj:A (2.1) BS06 LYS 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 32111831
    459979 6ehj:A (2.1) BS07 COA 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 32111831
    459980 6ehj:B (2.1) BS01 COA 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 32111831
    459981 6ehj:B (2.1) BS02 ASN 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 32111831
    459982 6ehj:B (2.1) BS03 LYS 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 32111831
    459983 6ehj:B (2.1) BS04 SER 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 32111831
    459984 6ehj:B (2.1) BS05 LYS 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 32111831
    459985 6ehj:B (2.1) BS06 PRO 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 32111831
    459986 6ehk:A (1.4) BS01 AUW 2.7.11.1 GO:0004672 ... P68400 29732088 BindingDB: IC50=7000nM
    459987 6ehk:A (1.4) BS02 54G 2.7.11.1 GO:0004672 ... P68400 29732088 BindingDB: Kd=58000nM
    459988 6ehq:L (2.2) BS01 F3S 1.12.99.6 GO:0005515 ... P0ACE0 29555844
    459989 6ehq:L (2.2) BS02 SF4 1.12.99.6 GO:0005515 ... P0ACE0 29555844
    459990 6ehq:L (2.2) BS03 FCO 1.12.99.6 GO:0005515 ... P0ACE0 29555844
    459991 6ehq:L (2.2) BS04 MG 1.12.99.6 GO:0005515 ... P0ACE0 29555844
    459992 6ehq:M (2.2) BS01 F3S 1.12.99.6 GO:0005515 ... P0ACE0 29555844
    459993 6ehq:M (2.2) BS02 FCO 1.12.99.6 GO:0005515 ... P0ACE0 29555844
    459994 6ehq:M (2.2) BS03 MG 1.12.99.6 GO:0005515 ... P0ACE0 29555844
    459995 6ehq:S (2.2) BS01 SF4 1.12.99.6 GO:0008901 ... P69741 29555844
    459996 6ehq:S (2.2) BS02 F3S 1.12.99.6 GO:0008901 ... P69741 29555844
    459997 6ehq:S (2.2) BS03 SF4 1.12.99.6 GO:0008901 ... P69741 29555844
    459998 6ehq:T (2.2) BS01 SF4 1.12.99.6 GO:0008901 ... P69741 29555844
    459999 6ehq:T (2.2) BS02 F3S 1.12.99.6 GO:0008901 ... P69741 29555844
    460000 6ehq:T (2.2) BS03 SF4 1.12.99.6 GO:0008901 ... P69741 29555844

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).