SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 2297 2298 2299 2300 2301 2302 2303 2304 2305 2306 2307 2308 2309 2310 2311 2312 2313 2314 2315 2316 2317 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    461201 6eot:K (3.5) BS01 peptide 3.4.14.5 GO:0004177 ... Q6V1X1 29382749
    461202 6eow:A (1.8) BS01 NAP ? GO:0000166 ... G1FCG0 N/A
    461203 6eow:B (1.8) BS01 BKZ ? GO:0000166 ... G1FCG0 N/A
    461204 6eow:B (1.8) BS02 NAP ? GO:0000166 ... G1FCG0 N/A
    461205 6eow:C (1.8) BS01 BKZ ? GO:0000166 ... G1FCG0 N/A
    461206 6eow:C (1.8) BS02 NAP ? GO:0000166 ... G1FCG0 N/A
    461207 6eow:D (1.8) BS01 BKZ ? GO:0000166 ... G1FCG0 N/A
    461208 6eow:D (1.8) BS02 NAP ? GO:0000166 ... G1FCG0 N/A
    461209 6eox:A (1.3) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 29727184
    461210 6eox:A (1.3) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 29727184
    461211 6eox:A (1.3) BS03 CA 3.4.24.65 GO:0004222 ... P39900 29727184
    461212 6eox:A (1.3) BS04 CA 3.4.24.65 GO:0004222 ... P39900 29727184
    461213 6eox:A (1.3) BS05 CA 3.4.24.65 GO:0004222 ... P39900 29727184
    461214 6eox:A (1.3) BS06 BKW 3.4.24.65 GO:0004222 ... P39900 29727184 BindingDB: IC50=140nM
    461215 6eoy:A (1.38) BS01 BM8 ? GO:0001523 ... P02766 34555615
    461216 6eoy:B (1.38) BS01 BM8 ? GO:0001523 ... P02766 34555615
    461217 6eoz:A (1.55) BS01 AKG 1.14.11.81 N/A Q5AR53 29563492
    461218 6eoz:A (1.55) BS02 58K 1.14.11.81 N/A Q5AR53 29563492
    461219 6ep0:A (2.35) BS01 AMP N/A N/A N/A 30850593
    461220 6ep0:A (2.35) BS02 CA N/A N/A N/A 30850593
    461221 6ep0:B (2.35) BS01 AMP N/A N/A N/A 30850593
    461222 6ep1:A (1.3) BS01 BQB ? GO:0001523 ... P02766 N/A
    461223 6ep1:B (1.3) BS01 BQB ? GO:0001523 ... P02766 N/A
    461224 6ep2:A (2.15) BS01 ADP N/A N/A N/A 30850593
    461225 6ep2:B (2.15) BS01 ADP N/A N/A N/A 30850593
    461226 6ep2:C (2.15) BS01 ADP N/A N/A N/A 30850593
    461227 6ep2:D (2.15) BS01 ADP N/A N/A N/A 30850593
    461228 6ep2:E (2.15) BS01 ADP N/A N/A N/A 30850593
    461229 6ep2:F (2.15) BS01 ADP N/A N/A N/A 30850593
    461230 6ep2:G (2.15) BS01 ADP N/A N/A N/A 30850593
    461231 6ep2:H (2.15) BS01 ADP N/A N/A N/A 30850593
    461232 6ep2:I (2.15) BS01 ADP N/A N/A N/A 30850593
    461233 6ep2:J (2.15) BS01 ADP N/A N/A N/A 30850593
    461234 6ep2:K (2.15) BS01 ADP N/A N/A N/A 30850593
    461235 6ep2:L (2.15) BS01 ADP N/A N/A N/A 30850593
    461236 6ep4:A (2.30005) BS01 FUL 3.1.1.8 GO:0001540 ... P06276 29186056
    461237 6ep4:A (2.30005) BS02 DME 3.1.1.8 GO:0001540 ... P06276 29186056 MOAD: Ki=4.5uM
    461238 6ep5:A (1.928) BS01 ADP N/A N/A N/A 30850593
    461239 6ep5:B (1.928) BS01 ADP N/A N/A N/A 30850593
    461240 6ep5:C (1.928) BS01 ADP N/A N/A N/A 30850593
    461241 6ep5:D (1.928) BS01 ADP N/A N/A N/A 30850593
    461242 6ep5:E (1.928) BS01 ADP N/A N/A N/A 30850593
    461243 6ep5:F (1.928) BS01 ADP N/A N/A N/A 30850593
    461244 6ep7:A (1.947) BS01 GSH 2.5.1.18 GO:0004364 ... Q9M9F1 29031766
    461245 6ep7:B (1.947) BS01 GSH 2.5.1.18 GO:0004364 ... Q9M9F1 29031766
    461246 6ep8:A (1.8) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 30217823
    461247 6ep9:A (2.01) BS01 BNB 2.7.10.2 GO:0004672 ... Q06187 30756207
    461248 6epa:A (1.82) BS01 CA ? GO:0005509 ... Q9VWX8 29966094
    461249 6epa:A (1.82) BS02 CA ? GO:0005509 ... Q9VWX8 29966094
    461250 6epa:A (1.82) BS03 CA ? GO:0005509 ... Q9VWX8 29966094
    461251 6epa:A (1.82) BS04 BNQ ? GO:0005509 ... Q9VWX8 29966094 BindingDB: Kd=1130nM
    461252 6epb:A (1.75) BS01 ZN 3.2.1.14 GO:0004553 ... P48827 29566690
    461253 6epc:R (12.3) BS01 peptide ? GO:0000502 ... Q6PCT9 29398115
    461254 6epd:R (15.4) BS01 peptide ? GO:0000502 ... Q6PCT9 29398115
    461255 6epe:R (12.8) BS01 peptide ? GO:0000502 ... Q6PCT9 29398115
    461256 6epe:S (12.8) BS01 peptide ? GO:0000502 ... A6HIT6 29398115
    461257 6epf:R (11.8) BS01 peptide ? GO:0000502 ... Q6PCT9 29398115
    461258 6epf:S (11.8) BS01 peptide ? GO:0000502 ... A6HIT6 29398115
    461259 6eph:B (2.7) BS01 EPZ ? N/A D5K9G7 29703974
    461260 6eph:D (2.7) BS01 EPZ ? N/A D5K9G7 29703974
    461261 6eph:F (2.7) BS01 EPZ ? N/A D5K9G7 29703974
    461262 6eph:H (2.7) BS01 EPZ ? N/A D5K9G7 29703974
    461263 6epi:B (2.8) BS01 BNW ? N/A D5K9G7 29703974
    461264 6epi:D (2.8) BS01 BNW ? N/A D5K9G7 29703974
    461265 6epi:F (2.8) BS01 BNW ? N/A D5K9G7 29703974
    461266 6epi:H (2.8) BS01 BNW ? N/A D5K9G7 29703974
    461267 6epj:A (1.652) BS01 BOH 3.6.1.- N/A Q6PL18 32832026 BindingDB: IC50=>150000nM
    461268 6epj:A (1.652) BS02 BOH 3.6.1.- N/A Q6PL18 32832026 BindingDB: IC50=>150000nM
    461269 6epm:S (2.5) BS01 BQ5 ? GO:0005085 ... Q07889 30683722
    461270 6epn:S (2.5) BS01 BQ2 ? GO:0005085 ... Q07889 30683722
    461271 6epo:S (2.4) BS01 BPW ? GO:0005085 ... Q07889 30683722
    461272 6epo:S (2.4) BS02 BPW ? GO:0005085 ... Q07889 30683722
    461273 6epp:S (2.4) BS01 BOQ ? GO:0005085 ... Q07889 30683722
    461274 6epr:A (2.053) BS01 BQE 3.6.1.- N/A Q6PL18 N/A
    461275 6eps:A (2.081) BS01 BQK 3.6.1.- N/A Q6PL18 N/A
    461276 6ept:A (1.65) BS01 G1E 3.6.1.- N/A Q6PL18 32832026 BindingDB: IC50=>150000nM
    461277 6ept:A (1.65) BS02 BQQ 3.6.1.- N/A Q6PL18 32832026
    461278 6epu:A (1.8) BS01 BQH 3.6.1.- N/A Q6PL18 32832026
    461279 6epv:A (1.793) BS01 BQT 3.6.1.- N/A Q6PL18 32832026 BindingDB: IC50=>150000nM
    461280 6epw:A (1.924) BS01 BQ8 3.6.1.- N/A Q6PL18 N/A
    461281 6epw:A (1.924) BS02 BQ8 3.6.1.- N/A Q6PL18 N/A
    461282 6epx:A (1.84) BS01 BQW 3.6.1.- N/A Q6PL18 32832026
    461283 6epx:A (1.84) BS02 BQW 3.6.1.- N/A Q6PL18 32832026
    461284 6epy:A (2.04) BS01 FRU N/A N/A N/A 29602905
    461285 6epy:A (2.04) BS02 GLC N/A N/A N/A 29602905
    461286 6epy:A (2.04) BS03 GLA N/A N/A N/A 29602905
    461287 6epy:A (2.04) BS04 CA N/A N/A N/A 29602905
    461288 6epy:A (2.04) BS05 CA N/A N/A N/A 29602905
    461289 6epy:A (2.04) BS06 CA N/A N/A N/A 29602905
    461290 6epy:A (2.04) BS07 CA N/A N/A N/A 29602905
    461291 6epy:A (2.04) BS08 CA N/A N/A N/A 29602905
    461292 6epy:A (2.04) BS09 CA N/A N/A N/A 29602905
    461293 6epy:A (2.04) BS10 CA N/A N/A N/A 29602905
    461294 6epy:A (2.04) BS11 CA N/A N/A N/A 29602905
    461295 6epy:A (2.04) BS12 CA N/A N/A N/A 29602905
    461296 6epy:A (2.04) BS13 CA N/A N/A N/A 29602905
    461297 6epy:A (2.04) BS14 CA N/A N/A N/A 29602905
    461298 6epy:A (2.04) BS15 CA N/A N/A N/A 29602905
    461299 6epy:A (2.04) BS16 CA N/A N/A N/A 29602905
    461300 6epy:A (2.04) BS17 CA N/A N/A N/A 29602905
    461301 6epy:A (2.04) BS18 CA N/A N/A N/A 29602905
    461302 6epy:A (2.04) BS19 CA N/A N/A N/A 29602905
    461303 6epy:A (2.04) BS20 CA N/A N/A N/A 29602905
    461304 6epy:A (2.04) BS21 CA N/A N/A N/A 29602905
    461305 6epy:A (2.04) BS22 CA N/A N/A N/A 29602905
    461306 6epy:A (2.04) BS23 CA N/A N/A N/A 29602905
    461307 6epy:A (2.04) BS24 CA N/A N/A N/A 29602905
    461308 6epy:A (2.04) BS25 CA N/A N/A N/A 29602905
    461309 6epy:A (2.04) BS26 CA N/A N/A N/A 29602905
    461310 6epy:A (2.04) BS27 CA N/A N/A N/A 29602905
    461311 6epy:A (2.04) BS28 CA N/A N/A N/A 29602905
    461312 6epy:A (2.04) BS29 CA N/A N/A N/A 29602905
    461313 6epy:A (2.04) BS30 CA N/A N/A N/A 29602905
    461314 6epy:A (2.04) BS31 CA N/A N/A N/A 29602905
    461315 6epy:A (2.04) BS32 CA N/A N/A N/A 29602905
    461316 6epy:A (2.04) BS33 CA N/A N/A N/A 29602905
    461317 6epy:A (2.04) BS34 CA N/A N/A N/A 29602905
    461318 6epy:A (2.04) BS35 CA N/A N/A N/A 29602905
    461319 6epy:A (2.04) BS36 CA N/A N/A N/A 29602905
    461320 6epy:A (2.04) BS37 CA N/A N/A N/A 29602905
    461321 6epy:B (2.04) BS01 FRU N/A N/A N/A 29602905
    461322 6epy:B (2.04) BS02 GLC N/A N/A N/A 29602905
    461323 6epy:B (2.04) BS03 GLA N/A N/A N/A 29602905
    461324 6epy:B (2.04) BS04 CA N/A N/A N/A 29602905
    461325 6epy:B (2.04) BS05 CA N/A N/A N/A 29602905
    461326 6epy:B (2.04) BS06 CA N/A N/A N/A 29602905
    461327 6epy:B (2.04) BS07 CA N/A N/A N/A 29602905
    461328 6epy:B (2.04) BS08 CA N/A N/A N/A 29602905
    461329 6epy:B (2.04) BS09 CA N/A N/A N/A 29602905
    461330 6epy:B (2.04) BS10 CA N/A N/A N/A 29602905
    461331 6epy:B (2.04) BS11 CA N/A N/A N/A 29602905
    461332 6epy:B (2.04) BS12 CA N/A N/A N/A 29602905
    461333 6epy:B (2.04) BS13 CA N/A N/A N/A 29602905
    461334 6epy:B (2.04) BS14 CA N/A N/A N/A 29602905
    461335 6epy:B (2.04) BS15 CA N/A N/A N/A 29602905
    461336 6epy:B (2.04) BS16 CA N/A N/A N/A 29602905
    461337 6epy:B (2.04) BS17 CA N/A N/A N/A 29602905
    461338 6epy:B (2.04) BS18 CA N/A N/A N/A 29602905
    461339 6epy:B (2.04) BS19 CA N/A N/A N/A 29602905
    461340 6epy:B (2.04) BS20 CA N/A N/A N/A 29602905
    461341 6epy:B (2.04) BS21 CA N/A N/A N/A 29602905
    461342 6epy:B (2.04) BS22 CA N/A N/A N/A 29602905
    461343 6epy:B (2.04) BS23 CA N/A N/A N/A 29602905
    461344 6epy:B (2.04) BS24 CA N/A N/A N/A 29602905
    461345 6epy:B (2.04) BS25 CA N/A N/A N/A 29602905
    461346 6epy:B (2.04) BS26 CA N/A N/A N/A 29602905
    461347 6epy:B (2.04) BS27 CA N/A N/A N/A 29602905
    461348 6epy:B (2.04) BS28 CA N/A N/A N/A 29602905
    461349 6epy:B (2.04) BS29 CA N/A N/A N/A 29602905
    461350 6epy:B (2.04) BS30 CA N/A N/A N/A 29602905
    461351 6epy:B (2.04) BS31 CA N/A N/A N/A 29602905
    461352 6epy:B (2.04) BS32 CA N/A N/A N/A 29602905
    461353 6epy:B (2.04) BS33 CA N/A N/A N/A 29602905
    461354 6epy:B (2.04) BS34 CA N/A N/A N/A 29602905
    461355 6epy:B (2.04) BS35 CA N/A N/A N/A 29602905
    461356 6epy:B (2.04) BS36 CA N/A N/A N/A 29602905
    461357 6epy:C (2.04) BS01 FRU N/A N/A N/A 29602905
    461358 6epy:C (2.04) BS02 GLC N/A N/A N/A 29602905
    461359 6epy:C (2.04) BS03 GLA N/A N/A N/A 29602905
    461360 6epy:C (2.04) BS04 CA N/A N/A N/A 29602905
    461361 6epy:C (2.04) BS05 CA N/A N/A N/A 29602905
    461362 6epy:C (2.04) BS06 CA N/A N/A N/A 29602905
    461363 6epy:C (2.04) BS07 CA N/A N/A N/A 29602905
    461364 6epy:C (2.04) BS08 CA N/A N/A N/A 29602905
    461365 6epy:C (2.04) BS09 CA N/A N/A N/A 29602905
    461366 6epy:C (2.04) BS10 CA N/A N/A N/A 29602905
    461367 6epy:C (2.04) BS11 CA N/A N/A N/A 29602905
    461368 6epy:C (2.04) BS12 CA N/A N/A N/A 29602905
    461369 6epy:C (2.04) BS13 CA N/A N/A N/A 29602905
    461370 6epy:C (2.04) BS14 CA N/A N/A N/A 29602905
    461371 6epy:C (2.04) BS15 CA N/A N/A N/A 29602905
    461372 6epy:C (2.04) BS16 CA N/A N/A N/A 29602905
    461373 6epy:C (2.04) BS17 CA N/A N/A N/A 29602905
    461374 6epy:C (2.04) BS18 CA N/A N/A N/A 29602905
    461375 6epy:C (2.04) BS19 CA N/A N/A N/A 29602905
    461376 6epy:C (2.04) BS20 CA N/A N/A N/A 29602905
    461377 6epy:C (2.04) BS21 CA N/A N/A N/A 29602905
    461378 6epy:C (2.04) BS22 CA N/A N/A N/A 29602905
    461379 6epy:C (2.04) BS23 CA N/A N/A N/A 29602905
    461380 6epy:C (2.04) BS24 CA N/A N/A N/A 29602905
    461381 6epy:D (2.04) BS01 FRU N/A N/A N/A 29602905
    461382 6epy:D (2.04) BS02 GLC N/A N/A N/A 29602905
    461383 6epy:D (2.04) BS03 GLA N/A N/A N/A 29602905
    461384 6epy:D (2.04) BS04 CA N/A N/A N/A 29602905
    461385 6epy:D (2.04) BS05 CA N/A N/A N/A 29602905
    461386 6epy:D (2.04) BS06 CA N/A N/A N/A 29602905
    461387 6epy:D (2.04) BS07 CA N/A N/A N/A 29602905
    461388 6epy:D (2.04) BS08 CA N/A N/A N/A 29602905
    461389 6epy:D (2.04) BS09 CA N/A N/A N/A 29602905
    461390 6epy:D (2.04) BS10 CA N/A N/A N/A 29602905
    461391 6epy:D (2.04) BS11 CA N/A N/A N/A 29602905
    461392 6epy:D (2.04) BS12 CA N/A N/A N/A 29602905
    461393 6epz:A (1.8) BS01 GLC N/A N/A N/A 29602905
    461394 6epz:A (1.8) BS02 GLA N/A N/A N/A 29602905
    461395 6epz:B (1.8) BS01 GLC N/A N/A N/A 29602905
    461396 6epz:B (1.8) BS02 GLA N/A N/A N/A 29602905
    461397 6epz:C (1.8) BS01 GLC N/A N/A N/A 29602905
    461398 6epz:C (1.8) BS02 GLA N/A N/A N/A 29602905
    461399 6epz:C (1.8) BS03 MG N/A N/A N/A 29602905
    461400 6epz:D (1.8) BS01 GLC N/A N/A N/A 29602905

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).