SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    461601 6eri:Az (3.0) BS02 rna ? GO:0006412 ... P82231 29610536
    461602 6eri:BB (3.0) BS01 rna ? GO:0003735 ... P08242 29610536
    461603 6eri:BC (3.0) BS01 rna ? GO:0003723 ... P09595 29610536
    461604 6eri:BD (3.0) BS01 rna ? GO:0003723 ... P13788 29610536
    461605 6eri:BE (3.0) BS01 rna ? GO:0003723 ... Q9ST69 29610536
    461606 6eri:BF (3.0) BS01 rna ? GO:0003735 ... P82403 29610536
    461607 6eri:BG (3.0) BS01 rna ? GO:0000028 ... P82129 29610536
    461608 6eri:BH (3.0) BS01 rna ? GO:0003735 ... P09597 29610536
    461609 6eri:BI (3.0) BS01 rna ? GO:0003735 ... P82278 29610536
    461610 6eri:BJ (3.0) BS01 rna ? GO:0003723 ... P82162 29610536
    461611 6eri:BK (3.0) BS01 rna ? GO:0003735 ... P06506 29610536
    461612 6eri:BL (3.0) BS01 rna ? GO:0003735 ... P62128 29610536
    461613 6eri:BM (3.0) BS01 rna ? GO:0003676 ... P82163 29610536
    461614 6eri:BM (3.0) BS02 MG ? GO:0003676 ... P82163 29610536
    461615 6eri:BN (3.0) BS01 rna ? GO:0003735 ... P06507 29610536
    461616 6eri:BO (3.0) BS01 rna ? GO:0003735 ... Q9M3I4 29610536
    461617 6eri:BO (3.0) BS02 rna ? GO:0003735 ... Q9M3I4 29610536
    461618 6eri:BP (3.0) BS01 rna ? GO:0003735 ... P28807 29610536
    461619 6eri:BQ (3.0) BS01 rna ? GO:0003735 ... P82137 29610536
    461620 6eri:BR (3.0) BS01 rna ? GO:0003735 ... Q9M3K7 29610536
    461621 6eri:BS (3.0) BS01 rna ? GO:0003723 ... P06508 29610536
    461622 6eri:BT (3.0) BS01 rna ? GO:0003723 ... P82130 29610536
    461623 6eri:BU (3.0) BS01 rna ? GO:0003735 ... P82024 29610536
    461624 6eri:BV (3.0) BS01 rna ? GO:0044238 ... P19954 29610536
    461625 6eri:BW (3.0) BS01 rna ? GO:0005840 ... P47910 29610536
    461626 6erk:A (1.6) BS01 PLP 2.6.1.62 GO:0004015 ... Q1QDV8 30178202
    461627 6erk:B (1.6) BS01 PLP 2.6.1.62 GO:0004015 ... Q1QDV8 30178202
    461628 6erp:A (4.502) BS01 dna 2.7.7.6 GO:0000175 ... O00411 29149603
    461629 6erp:B (4.502) BS01 dna 2.7.7.6 GO:0000175 ... O00411 29149603
    461630 6erp:B (4.502) BS02 dna 2.7.7.6 GO:0000175 ... O00411 29149603
    461631 6erp:C (4.502) BS01 dna ? N/A Q00059 29149603
    461632 6erp:C (4.502) BS02 dna ? N/A Q00059 29149603
    461633 6erp:F (4.502) BS01 dna 2.1.1.- GO:0000154 ... Q9H5Q4 29149603
    461634 6erp:G (4.502) BS01 dna ? N/A Q00059 29149603
    461635 6erp:G (4.502) BS02 dna ? N/A Q00059 29149603
    461636 6erp:J (4.502) BS01 dna 2.1.1.- GO:0000154 ... Q9H5Q4 29149603
    461637 6erp:J (4.502) BS02 dna 2.1.1.- GO:0000154 ... Q9H5Q4 29149603
    461638 6erq:A (4.5) BS01 dna 2.7.7.6 GO:0000175 ... O00411 29149603
    461639 6erq:A (4.5) BS02 dna 2.7.7.6 GO:0000175 ... O00411 29149603
    461640 6erq:B (4.5) BS01 dna 2.7.7.6 GO:0000175 ... O00411 29149603
    461641 6erq:B (4.5) BS02 dna 2.7.7.6 GO:0000175 ... O00411 29149603
    461642 6erq:C (4.5) BS01 dna ? N/A Q00059 29149603
    461643 6erq:C (4.5) BS02 dna ? N/A Q00059 29149603
    461644 6erq:F (4.5) BS01 dna 2.1.1.- GO:0000154 ... Q9H5Q4 29149603
    461645 6erq:G (4.5) BS01 dna ? N/A Q00059 29149603
    461646 6erq:G (4.5) BS02 dna ? N/A Q00059 29149603
    461647 6erq:J (4.5) BS01 dna 2.1.1.- GO:0000154 ... Q9H5Q4 29149603
    461648 6erq:J (4.5) BS02 dna 2.1.1.- GO:0000154 ... Q9H5Q4 29149603
    461649 6ert:A (1.8) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    461650 6ert:A (1.8) BS02 BVZ 2.7.11.11 GO:0000287 ... P25321 N/A
    461651 6eru:A (2.15) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    461652 6erv:A (2.06) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    461653 6erw:A (1.89) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    461654 6erw:A (1.89) BS02 M77 2.7.11.11 GO:0000287 ... P25321 N/A
    461655 6es0:A (2.38) BS01 BW8 2.7.10.2
    2.7.11.1
    GO:0004672 ... O43353 29409752 MOAD: ic50=2.26uM
    BindingDB: IC50=4870nM
    461656 6es0:B (2.38) BS01 BW8 2.7.10.2
    2.7.11.1
    GO:0004672 ... O43353 29409752 MOAD: ic50=2.26uM
    BindingDB: IC50=4870nM
    461657 6es2:K (2.95) BS01 dna ? GO:0000981 ... Q99626 29638214
    461658 6es2:K (2.95) BS02 dna ? GO:0000981 ... Q99626 29638214
    461659 6es2:L (2.95) BS01 dna ? GO:0000981 ... Q99626 29638214
    461660 6es2:L (2.95) BS02 dna ? GO:0000981 ... Q99626 29638214
    461661 6es3:K (2.57) BS01 dna ? GO:0000981 ... Q99626 29638214
    461662 6es3:K (2.57) BS02 dna ? GO:0000981 ... Q99626 29638214
    461663 6es3:M (2.57) BS01 dna ? GO:0000981 ... Q99626 29638214
    461664 6es3:M (2.57) BS02 dna ? GO:0000981 ... Q99626 29638214
    461665 6es9:A (1.37) BS01 COA 1.3.8.- GO:0000166 ... A1B5Y0 29275330
    461666 6es9:A (1.37) BS02 FAD 1.3.8.- GO:0000166 ... A1B5Y0 29275330
    461667 6es9:A (1.37) BS03 FAD 1.3.8.- GO:0000166 ... A1B5Y0 29275330
    461668 6es9:B (1.37) BS01 FAD 1.3.8.- GO:0000166 ... A1B5Y0 29275330
    461669 6es9:B (1.37) BS02 COA 1.3.8.- GO:0000166 ... A1B5Y0 29275330
    461670 6es9:B (1.37) BS03 FAD 1.3.8.- GO:0000166 ... A1B5Y0 29275330
    461671 6esa:A (1.307) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    461672 6esa:A (1.307) BS02 AMP 2.7.11.11 GO:0000287 ... P25321 N/A
    461673 6esa:A (1.307) BS03 RIP 2.7.11.11 GO:0000287 ... P25321 N/A
    461674 6esb:1 (3.4) BS01 SIA ? GO:0005198 ... P03088 29706532
    461675 6esb:1 (3.4) BS02 CA ? GO:0005198 ... P03088 29706532
    461676 6esb:2 (3.4) BS01 SIA ? GO:0005198 ... P03088 29706532
    461677 6esb:2 (3.4) BS02 CA ? GO:0005198 ... P03088 29706532
    461678 6esb:3 (3.4) BS01 SIA ? GO:0005198 ... P03088 29706532
    461679 6esb:3 (3.4) BS02 CA ? GO:0005198 ... P03088 29706532
    461680 6esb:4 (3.4) BS01 SIA ? GO:0005198 ... P03088 29706532
    461681 6esb:4 (3.4) BS02 CA ? GO:0005198 ... P03088 29706532
    461682 6esb:5 (3.4) BS01 SIA ? GO:0005198 ... P03088 29706532
    461683 6esb:5 (3.4) BS02 CA ? GO:0005198 ... P03088 29706532
    461684 6esb:6 (3.4) BS01 peptide ? GO:0005198 ... P03088 29706532
    461685 6esb:6 (3.4) BS02 SIA ? GO:0005198 ... P03088 29706532
    461686 6esb:6 (3.4) BS03 CA ? GO:0005198 ... P03088 29706532
    461687 6esd:A (2.6) BS01 FAD 1.4.3.23 GO:0016491 ... Q9S3V1 N/A
    461688 6esd:B (2.6) BS01 FAD 1.4.3.23 GO:0016491 ... Q9S3V1 N/A
    461689 6esf:A (3.7) BS01 dna ? GO:0000786 ... P84233 29323273
    461690 6esf:A (3.7) BS02 dna ? GO:0000786 ... P84233 29323273
    461691 6esf:B (3.7) BS01 dna ? GO:0000786 ... P62799 29323273
    461692 6esf:B (3.7) BS02 dna ? GO:0000786 ... P62799 29323273
    461693 6esf:C (3.7) BS01 dna ? GO:0000786 ... Q6AZJ8 29323273
    461694 6esf:C (3.7) BS02 dna ? GO:0000786 ... Q6AZJ8 29323273
    461695 6esf:D (3.7) BS01 dna ? GO:0000786 ... P02281 29323273
    461696 6esf:D (3.7) BS02 dna ? GO:0000786 ... P02281 29323273
    461697 6esf:E (3.7) BS01 dna ? GO:0000786 ... P84233 29323273
    461698 6esf:E (3.7) BS02 dna ? GO:0000786 ... P84233 29323273
    461699 6esf:F (3.7) BS01 dna ? GO:0000786 ... P62799 29323273
    461700 6esf:F (3.7) BS02 dna ? GO:0000786 ... P62799 29323273
    461701 6esf:G (3.7) BS01 dna ? GO:0000786 ... Q6AZJ8 29323273
    461702 6esf:G (3.7) BS02 dna ? GO:0000786 ... Q6AZJ8 29323273
    461703 6esf:H (3.7) BS01 dna ? GO:0000786 ... P02281 29323273
    461704 6esg:A (5.4) BS01 dna ? GO:0000786 ... P84233 29323273
    461705 6esg:A (5.4) BS02 dna ? GO:0000786 ... P84233 29323273
    461706 6esg:B (5.4) BS01 dna ? GO:0000786 ... P62799 29323273
    461707 6esg:B (5.4) BS02 dna ? GO:0000786 ... P62799 29323273
    461708 6esg:C (5.4) BS01 dna ? GO:0000786 ... Q6AZJ8 29323273
    461709 6esg:C (5.4) BS02 dna ? GO:0000786 ... Q6AZJ8 29323273
    461710 6esg:D (5.4) BS01 dna ? GO:0000786 ... P02281 29323273
    461711 6esg:D (5.4) BS02 dna ? GO:0000786 ... P02281 29323273
    461712 6esg:E (5.4) BS01 dna ? GO:0000786 ... P84233 29323273
    461713 6esg:E (5.4) BS02 dna ? GO:0000786 ... P84233 29323273
    461714 6esg:F (5.4) BS01 dna ? GO:0000786 ... P62799 29323273
    461715 6esg:F (5.4) BS02 dna ? GO:0000786 ... P62799 29323273
    461716 6esg:G (5.4) BS01 dna ? GO:0000786 ... Q6AZJ8 29323273
    461717 6esg:G (5.4) BS02 dna ? GO:0000786 ... Q6AZJ8 29323273
    461718 6esg:H (5.4) BS01 dna ? GO:0000786 ... P02281 29323273
    461719 6esg:H (5.4) BS02 dna ? GO:0000786 ... P02281 29323273
    461720 6esh:A (5.1) BS01 dna ? GO:0000786 ... P84233 29323273
    461721 6esh:A (5.1) BS02 dna ? GO:0000786 ... P84233 29323273
    461722 6esh:B (5.1) BS01 dna ? GO:0000786 ... P62799 29323273
    461723 6esh:B (5.1) BS02 dna ? GO:0000786 ... P62799 29323273
    461724 6esh:C (5.1) BS01 dna ? GO:0000786 ... Q6AZJ8 29323273
    461725 6esh:C (5.1) BS02 dna ? GO:0000786 ... Q6AZJ8 29323273
    461726 6esh:D (5.1) BS01 dna ? GO:0000786 ... P02281 29323273
    461727 6esh:E (5.1) BS01 dna ? GO:0000786 ... P84233 29323273
    461728 6esh:E (5.1) BS02 dna ? GO:0000786 ... P84233 29323273
    461729 6esh:F (5.1) BS01 dna ? GO:0000786 ... P62799 29323273
    461730 6esh:F (5.1) BS02 dna ? GO:0000786 ... P62799 29323273
    461731 6esh:G (5.1) BS01 dna ? GO:0000786 ... Q6AZJ8 29323273
    461732 6esh:G (5.1) BS02 dna ? GO:0000786 ... Q6AZJ8 29323273
    461733 6esh:H (5.1) BS01 dna ? GO:0000786 ... P02281 29323273
    461734 6esh:H (5.1) BS02 dna ? GO:0000786 ... P02281 29323273
    461735 6esi:A (6.3) BS01 dna ? GO:0000786 ... P84233 29323273
    461736 6esi:A (6.3) BS02 dna ? GO:0000786 ... P84233 29323273
    461737 6esi:B (6.3) BS01 dna ? GO:0000786 ... P62799 29323273
    461738 6esi:B (6.3) BS02 dna ? GO:0000786 ... P62799 29323273
    461739 6esi:C (6.3) BS01 dna ? GO:0000786 ... Q6AZJ8 29323273
    461740 6esi:C (6.3) BS02 dna ? GO:0000786 ... Q6AZJ8 29323273
    461741 6esi:D (6.3) BS01 dna ? GO:0000786 ... P02281 29323273
    461742 6esi:D (6.3) BS02 dna ? GO:0000786 ... P02281 29323273
    461743 6esi:E (6.3) BS01 dna ? GO:0000786 ... P84233 29323273
    461744 6esi:E (6.3) BS02 dna ? GO:0000786 ... P84233 29323273
    461745 6esi:F (6.3) BS01 dna ? GO:0000786 ... P62799 29323273
    461746 6esi:F (6.3) BS02 dna ? GO:0000786 ... P62799 29323273
    461747 6esi:G (6.3) BS01 dna ? GO:0000786 ... Q6AZJ8 29323273
    461748 6esi:G (6.3) BS02 dna ? GO:0000786 ... Q6AZJ8 29323273
    461749 6esi:H (6.3) BS01 dna ? GO:0000786 ... P02281 29323273
    461750 6esi:H (6.3) BS02 dna ? GO:0000786 ... P02281 29323273
    461751 6esj:A (2.97985) BS01 PRM 3.1.1.8 GO:0001540 ... P06276 29186056
    461752 6esj:B (2.97985) BS01 PRM 3.1.1.8 GO:0001540 ... P06276 29186056
    461753 6esl:A (1.87) BS01 ZN 3.4.11.10 GO:0004177 ... Q5ZRR6 29666285
    461754 6esl:A (1.87) BS02 ZN 3.4.11.10 GO:0004177 ... Q5ZRR6 29666285
    461755 6esl:B (1.87) BS01 ZN 3.4.11.10 GO:0004177 ... Q5ZRR6 29666285
    461756 6esl:B (1.87) BS02 ZN 3.4.11.10 GO:0004177 ... Q5ZRR6 29666285
    461757 6esm:A (1.104) BS01 ZN 3.4.24.35 GO:0004222 ... P14780 29727184
    461758 6esm:A (1.104) BS02 ZN 3.4.24.35 GO:0004222 ... P14780 29727184
    461759 6esm:A (1.104) BS03 CA 3.4.24.35 GO:0004222 ... P14780 29727184
    461760 6esm:A (1.104) BS04 CA 3.4.24.35 GO:0004222 ... P14780 29727184
    461761 6esm:A (1.104) BS05 CA 3.4.24.35 GO:0004222 ... P14780 29727184
    461762 6esm:A (1.104) BS06 B9Z 3.4.24.35 GO:0004222 ... P14780 29727184 BindingDB: IC50=2960nM
    461763 6esm:A (1.104) BS07 PZE 3.4.24.35 GO:0004222 ... P14780 29727184
    461764 6esn:A (1.84) BS01 peptide ? GO:0003677 ... P51449 30095900
    461765 6esn:A (1.84) BS02 BWE ? GO:0003677 ... P51449 30095900 MOAD: ic50=0.009uM
    BindingDB: IC50=63nM
    461766 6esq:A (2.95) BS01 COA 2.3.1.9 GO:0003985 ... A0A384E138 29531083
    461767 6esq:B (2.95) BS01 COA 2.3.1.9 GO:0003985 ... A0A384E138 29531083
    461768 6esq:C (2.95) BS01 COA 2.3.1.9 GO:0003985 ... A0A384E138 29531083
    461769 6esq:D (2.95) BS01 COA 2.3.1.9 GO:0003985 ... A0A384E138 29531083
    461770 6esq:H (2.95) BS01 ZN ? GO:0046872 ... A0A384E139 29531083
    461771 6esq:I (2.95) BS01 COA 2.3.3.10 GO:0003985 ... A0A384E143 29531083
    461772 6ess:A (1.91) BS01 4IR ? GO:0005576 ... P22629 29265726
    461773 6est:A (1.8) BS01 CA 3.4.21.36 GO:0004252 ... P00772 2354062
    461774 6est:A (1.8) BS02 DMF 3.4.21.36 GO:0004252 ... P00772 2354062
    461775 6est:A (1.8) BS03 DMF 3.4.21.36 GO:0004252 ... P00772 2354062
    461776 6est:A (1.8) BS04 DMF 3.4.21.36 GO:0004252 ... P00772 2354062
    461777 6esu:A (1.78) BS01 6IR ? GO:0005576 ... P22629 29265726 MOAD: Ki=249.3mM
    461778 6esy:A (2.8) BS01 TFX 3.1.1.8 GO:0001540 ... P06276 29186056 BindingDB: Ki=3.62e+3nM
    461779 6esy:A (2.8) BS02 TFX 3.1.1.8 GO:0001540 ... P06276 29186056 BindingDB: Ki=3.62e+3nM
    461780 6esy:B (2.8) BS01 FUC 3.1.1.8 GO:0001540 ... P06276 29186056
    461781 6esy:B (2.8) BS02 TFX 3.1.1.8 GO:0001540 ... P06276 29186056 BindingDB: Ki=3.62e+3nM
    461782 6esy:B (2.8) BS03 TFX 3.1.1.8 GO:0001540 ... P06276 29186056 BindingDB: Ki=3.62e+3nM
    461783 6et3:A (2.25) BS01 BU3 2.3.1.230 GO:0004315 ... Q9I4X1 29722462
    461784 6et3:B (2.25) BS01 BU3 ? GO:0005737 ... Q9I4X2 29722462
    461785 6et3:B (2.25) BS02 BU3 ? GO:0005737 ... Q9I4X2 29722462
    461786 6et4:A (1.7) BS01 FMN 1.3.5.2 GO:0004151 ... Q02127 29549331
    461787 6et4:A (1.7) BS02 DOR 1.3.5.2 GO:0004151 ... Q02127 29549331
    461788 6et4:A (1.7) BS03 SDV 1.3.5.2 GO:0004151 ... Q02127 29549331 MOAD: ic50=11nM
    461789 6et5:1 (2.87) BS01 peptide ? GO:0016020 ... P04124 29618818
    461790 6et5:1 (2.87) BS02 peptide ? GO:0016020 ... P04124 29618818
    461791 6et5:1 (2.87) BS03 BCB ? GO:0016020 ... P04124 29618818
    461792 6et5:1 (2.87) BS04 BCB ? GO:0016020 ... P04124 29618818
    461793 6et5:1 (2.87) BS05 NS0 ? GO:0016020 ... P04124 29618818
    461794 6et5:3 (2.87) BS01 peptide ? GO:0016020 ... P04123 29618818
    461795 6et5:3 (2.87) BS02 NS0 ? GO:0016020 ... P04123 29618818
    461796 6et5:3 (2.87) BS03 BCB ? GO:0016020 ... P04123 29618818
    461797 6et5:3 (2.87) BS04 UQ9 ? GO:0016020 ... P04123 29618818
    461798 6et5:3 (2.87) BS05 BCB ? GO:0016020 ... P04123 29618818
    461799 6et5:3 (2.87) BS06 NS0 ? GO:0016020 ... P04123 29618818
    461800 6et5:4 (2.87) BS01 peptide ? GO:0016020 ... P04124 29618818

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).