SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    464801 6fgy:A (1.54) BS01 D9W 3.4.23.46 GO:0004190 ... P56817 29764741 MOAD: ic50=70nM
    BindingDB: IC50=70nM
    464802 6fh2:A (2.7) BS01 AN2 2.7.14.1 GO:0003824 ... P0DMM5 30962626
    464803 6fh3:A (1.85) BS01 RPI 2.7.14.1 GO:0003824 ... P0DMM5 30962626
    464804 6fh3:B (1.85) BS01 RPI 2.7.14.1 GO:0003824 ... P0DMM5 30962626
    464805 6fh4:A (2.49) BS01 RPI ? N/A A0A0C3K8Q6 30962626
    464806 6fh4:B (2.49) BS01 RPI ? N/A A0A0C3K8Q6 30962626
    464807 6fh4:C (2.49) BS01 RPI ? N/A A0A0C3K8Q6 30962626
    464808 6fh5:A (2.84) BS01 DD8 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... P48736 N/A
    464809 6fh6:A (2.082) BS01 D8Q ? N/A Q9UIF8 29770599
    464810 6fh7:A (2.1) BS01 EN2 ? N/A Q9UIF8 29770599
    464811 6fh8:A (1.64) BS01 JCT ? GO:0005576 ... P22629 30079176
    464812 6fhb:A (1.75) BS01 MG 2.7.11.1 GO:0004672 ... P53355 N/A
    464813 6fhg:A (1.95) BS01 ZN 3.5.1.28 GO:0001897 ... A0A088FLK9 30718611
    464814 6fhg:B (1.95) BS01 ZN 3.5.1.28 GO:0001897 ... A0A088FLK9 30718611
    464815 6fhh:A (2.7) BS01 rna ? GO:0003723 ... H6QM92 N/A
    464816 6fhh:A (2.7) BS02 rna ? GO:0003723 ... H6QM92 N/A
    464817 6fhh:A (2.7) BS03 peptide ? GO:0003723 ... H6QM92 N/A
    464818 6fhh:A (2.7) BS04 peptide ? GO:0003723 ... H6QM92 N/A
    464819 6fhh:B (2.7) BS01 rna 2.7.7.48 GO:0001172 ... H6QM91 N/A
    464820 6fhh:B (2.7) BS02 rna 2.7.7.48 GO:0001172 ... H6QM91 N/A
    464821 6fhh:C (2.7) BS01 rna ? GO:0003723 ... H6QM90 N/A
    464822 6fhi:A (2.8) BS01 rna ? GO:0003723 ... H6QM92 N/A
    464823 6fhi:A (2.8) BS02 rna ? GO:0003723 ... H6QM92 N/A
    464824 6fhi:A (2.8) BS03 peptide ? GO:0003723 ... H6QM92 N/A
    464825 6fhi:B (2.8) BS01 rna 2.7.7.48 GO:0001172 ... H6QM91 N/A
    464826 6fhi:B (2.8) BS02 rna 2.7.7.48 GO:0001172 ... H6QM91 N/A
    464827 6fhi:C (2.8) BS01 rna ? GO:0003723 ... H6QM90 N/A
    464828 6fhj:A (2.04) BS01 CA ? GO:0000272 ... A0A3F2YM16 N/A
    464829 6fhj:A (2.04) BS02 CA ? GO:0000272 ... A0A3F2YM16 N/A
    464830 6fhj:A (2.04) BS03 CA ? GO:0000272 ... A0A3F2YM16 N/A
    464831 6fhj:A (2.04) BS04 CA ? GO:0000272 ... A0A3F2YM16 N/A
    464832 6fhj:A (2.04) BS05 CA ? GO:0000272 ... A0A3F2YM16 N/A
    464833 6fhk:A (1.657) BS01 ADP ? GO:0005524 ... P0DMV8 30108182
    464834 6fhk:A (1.657) BS02 PO4 ? GO:0005524 ... P0DMV8 30108182
    464835 6fhk:B (1.657) BS01 ADP ? GO:0005524 ... P0DMV8 30108182
    464836 6fhk:B (1.657) BS02 PO4 ? GO:0005524 ... P0DMV8 30108182
    464837 6fhl:A (3.3) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    464838 6fhl:A (3.3) BS02 PO4 3.6.4.- GO:0000287 ... P68135 29867215
    464839 6fhl:B (3.3) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    464840 6fhl:B (3.3) BS02 PO4 3.6.4.- GO:0000287 ... P68135 29867215
    464841 6fhl:C (3.3) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    464842 6fhl:C (3.3) BS02 PO4 3.6.4.- GO:0000287 ... P68135 29867215
    464843 6fhl:D (3.3) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    464844 6fhl:D (3.3) BS02 PO4 3.6.4.- GO:0000287 ... P68135 29867215
    464845 6fhl:E (3.3) BS01 ADP 3.6.4.- GO:0000287 ... P68135 29867215
    464846 6fhl:E (3.3) BS02 PO4 3.6.4.- GO:0000287 ... P68135 29867215
    464847 6fhn:A (2.0) BS01 CA ? GO:0000272 ... A0A3F2YM17 N/A
    464848 6fhn:A (2.0) BS02 CA ? GO:0000272 ... A0A3F2YM17 N/A
    464849 6fhn:A (2.0) BS03 CA ? GO:0000272 ... A0A3F2YM17 N/A
    464850 6fhn:A (2.0) BS04 CA ? GO:0000272 ... A0A3F2YM17 N/A
    464851 6fhn:A (2.0) BS05 CA ? GO:0000272 ... A0A3F2YM17 N/A
    464852 6fho:A (1.75) BS01 FAD ? GO:0000166 ... Q9HWJ1 29669807
    464853 6fhq:A (1.95) BS01 ZN ? N/A Q9UIF8 29529862
    464854 6fhq:A (1.95) BS02 ZN ? N/A Q9UIF8 29529862
    464855 6fhq:A (1.95) BS03 DE5 ? N/A Q9UIF8 29529862 MOAD: Kd=3.4mM
    464856 6fhq:B (1.95) BS01 ZN ? N/A Q9UIF8 29529862
    464857 6fhq:B (1.95) BS02 ZN ? N/A Q9UIF8 29529862
    464858 6fhs:A (3.754) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYI5 29643509
    464859 6fhs:B (3.754) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYI5 29643509
    464860 6fhs:C (3.754) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYI5 29643509
    464861 6fhs:D (3.754) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYC2 29643509
    464862 6fhs:E (3.754) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYC2 29643509
    464863 6fhs:E (3.754) BS02 ADP 3.6.4.12 GO:0004386 ... G0RYC2 29643509
    464864 6fhs:F (3.754) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYC2 29643509
    464865 6fhs:J (3.754) BS01 ATP ? N/A G0S589 29643509
    464866 6fht:A (2.35) BS01 LBV 2.7.13.3 GO:0006355 ... P72951
    Q9RZA4
    29695503
    464867 6fht:B (2.35) BS01 LBV 2.7.13.3 GO:0006355 ... P72951
    Q9RZA4
    29695503
    464868 6fhu:A (2.0) BS01 peptide ? N/A Q9UIF9 29529862
    464869 6fhu:A (2.0) BS02 ZN ? N/A Q9UIF9 29529862
    464870 6fhu:A (2.0) BS03 ZN ? N/A Q9UIF9 29529862
    464871 6fhu:B (2.0) BS01 peptide ? N/A Q9UIF9 29529862
    464872 6fhu:B (2.0) BS02 ZN ? N/A Q9UIF9 29529862
    464873 6fhu:B (2.0) BS03 ZN ? N/A Q9UIF9 29529862
    464874 6fhu:C (2.0) BS01 ZN ? N/A Q9UIF9 29529862
    464875 6fhu:C (2.0) BS02 ZN ? N/A Q9UIF9 29529862
    464876 6fhu:D (2.0) BS01 peptide ? N/A Q9UIF9 29529862
    464877 6fhu:D (2.0) BS02 ZN ? N/A Q9UIF9 29529862
    464878 6fhu:D (2.0) BS03 ZN ? N/A Q9UIF9 29529862
    464879 6fhw:A (3.6) BS01 GLC 3.2.1.3 GO:0000272 ... Q03045 29717717
    464880 6fhw:A (3.6) BS02 AC1 3.2.1.3 GO:0000272 ... Q03045 29717717
    464881 6fhw:B (3.6) BS01 GLC 3.2.1.3 GO:0000272 ... Q03045 29717717
    464882 6fhw:B (3.6) BS02 AC1 3.2.1.3 GO:0000272 ... Q03045 29717717
    464883 6fhx:A (2.34) BS01 DSQ ? GO:0046872 ... C7BLE4 31624296
    464884 6fhx:A (2.34) BS02 DSQ ? GO:0046872 ... C7BLE4 31624296
    464885 6fhx:A (2.34) BS03 DSQ ? GO:0046872 ... C7BLE4 31624296
    464886 6fhx:A (2.34) BS04 DSQ ? GO:0046872 ... C7BLE4 31624296
    464887 6fhx:A (2.34) BS05 DSQ ? GO:0046872 ... C7BLE4 31624296
    464888 6fhx:B (2.34) BS01 DSQ ? GO:0046872 ... C7BLE4 31624296
    464889 6fhx:B (2.34) BS02 DSQ ? GO:0046872 ... C7BLE4 31624296
    464890 6fhx:B (2.34) BS03 DSQ ? GO:0046872 ... C7BLE4 31624296
    464891 6fhx:B (2.34) BS04 DSQ ? GO:0046872 ... C7BLE4 31624296
    464892 6fhx:B (2.34) BS05 DSQ ? GO:0046872 ... C7BLE4 31624296
    464893 6fhx:B (2.34) BS06 DSQ ? GO:0046872 ... C7BLE4 31624296
    464894 6fhy:A (1.86) BS01 DS8 ? GO:0046872 ... C7BLE4 31624296
    464895 6fhy:A (1.86) BS02 DS8 ? GO:0046872 ... C7BLE4 31624296
    464896 6fhy:A (1.86) BS03 DS8 ? GO:0046872 ... C7BLE4 31624296
    464897 6fhy:A (1.86) BS04 DS8 ? GO:0046872 ... C7BLE4 31624296
    464898 6fhy:A (1.86) BS05 DS8 ? GO:0046872 ... C7BLE4 31624296
    464899 6fhy:A (1.86) BS06 DS8 ? GO:0046872 ... C7BLE4 31624296
    464900 6fhy:B (1.86) BS01 DS8 ? GO:0046872 ... C7BLE4 31624296
    464901 6fhy:B (1.86) BS02 DS8 ? GO:0046872 ... C7BLE4 31624296
    464902 6fhy:B (1.86) BS03 DS8 ? GO:0046872 ... C7BLE4 31624296
    464903 6fhy:B (1.86) BS04 DS8 ? GO:0046872 ... C7BLE4 31624296
    464904 6fhy:B (1.86) BS05 DS8 ? GO:0046872 ... C7BLE4 31624296
    464905 6fhy:B (1.86) BS06 DS8 ? GO:0046872 ... C7BLE4 31624296
    464906 6fi0:A (1.9) BS01 ZN ? N/A Q9UIF9 29529862
    464907 6fi0:A (1.9) BS02 ZN ? N/A Q9UIF9 29529862
    464908 6fi0:B (1.9) BS01 ZN ? N/A Q9UIF9 29529862
    464909 6fi0:B (1.9) BS02 ZN ? N/A Q9UIF9 29529862
    464910 6fi0:B (1.9) BS03 DEW ? N/A Q9UIF9 29529862
    464911 6fi0:C (1.9) BS01 ZN ? N/A Q9UIF9 29529862
    464912 6fi0:C (1.9) BS02 ZN ? N/A Q9UIF9 29529862
    464913 6fi0:C (1.9) BS03 DEW ? N/A Q9UIF9 29529862
    464914 6fi0:D (1.9) BS01 ZN ? N/A Q9UIF9 29529862
    464915 6fi0:D (1.9) BS02 ZN ? N/A Q9UIF9 29529862
    464916 6fi1:A (2.7) BS01 ZN ? N/A Q9UIF8 29529862
    464917 6fi1:A (2.7) BS02 ZN ? N/A Q9UIF8 29529862
    464918 6fi1:A (2.7) BS03 D3H ? N/A Q9UIF8 29529862
    464919 6fi1:B (2.7) BS01 ZN ? N/A Q9UIF8 29529862
    464920 6fi1:B (2.7) BS02 ZN ? N/A Q9UIF8 29529862
    464921 6fi2:A (1.22) BS01 DJB 4.2.2.2 GO:0030570 ... A0A160EBC2 29735649
    464922 6fi2:A (1.22) BS02 DJE 4.2.2.2 GO:0030570 ... A0A160EBC2 29735649
    464923 6fi3:A (1.52) BS01 DJ2 2.7.11.24 GO:0000165 ... P63086 N/A
    464924 6fi4:A (2.0) BS01 peptide ? GO:0000122 ... P31947 29722962
    464925 6fi4:A (2.0) BS02 60H ? GO:0000122 ... P31947 29722962
    464926 6fi5:A (1.7) BS01 peptide ? GO:0000122 ... P31947 29722962
    464927 6fi5:A (1.7) BS02 60H ? GO:0000122 ... P31947 29722962
    464928 6fi6:A (1.65) BS01 DF8 2.7.11.24 GO:0000165 ... P63086 N/A
    464929 6fi8:A (2.598) BS01 dna ? GO:0003677 ... Q933Z0 29635476
    464930 6fi8:A (2.598) BS02 dna ? GO:0003677 ... Q933Z0 29635476
    464931 6fi8:A (2.598) BS03 dna ? GO:0003677 ... Q933Z0 29635476
    464932 6fi8:A (2.598) BS04 CA ? GO:0003677 ... Q933Z0 29635476
    464933 6fi8:A (2.598) BS05 CA ? GO:0003677 ... Q933Z0 29635476
    464934 6fi8:B (2.598) BS01 dna ? GO:0003677 ... Q933Z0 29635476
    464935 6fi8:B (2.598) BS02 dna ? GO:0003677 ... Q933Z0 29635476
    464936 6fi8:B (2.598) BS03 dna ? GO:0003677 ... Q933Z0 29635476
    464937 6fi8:B (2.598) BS04 dna ? GO:0003677 ... Q933Z0 29635476
    464938 6fi8:G (2.598) BS01 dna ? GO:0003677 ... Q933Z0 29635476
    464939 6fi8:G (2.598) BS02 dna ? GO:0003677 ... Q933Z0 29635476
    464940 6fi8:G (2.598) BS03 dna ? GO:0003677 ... Q933Z0 29635476
    464941 6fi8:G (2.598) BS04 dna ? GO:0003677 ... Q933Z0 29635476
    464942 6fi8:G (2.598) BS05 CA ? GO:0003677 ... Q933Z0 29635476
    464943 6fi8:G (2.598) BS06 CA ? GO:0003677 ... Q933Z0 29635476
    464944 6fi8:H (2.598) BS01 dna ? GO:0003677 ... Q933Z0 29635476
    464945 6fi8:H (2.598) BS02 dna ? GO:0003677 ... Q933Z0 29635476
    464946 6fi8:H (2.598) BS03 dna ? GO:0003677 ... Q933Z0 29635476
    464947 6fi8:H (2.598) BS04 CA ? GO:0003677 ... Q933Z0 29635476
    464948 6fi9:A (2.8) BS01 ZN ? GO:0003677 ... A2RNS2 30753183
    464949 6fi9:A (2.8) BS02 ZN ? GO:0003677 ... A2RNS2 30753183
    464950 6fi9:B (2.8) BS01 ZN ? GO:0003677 ... A2RNS2 30753183
    464951 6fi9:B (2.8) BS02 ZN ? GO:0003677 ... A2RNS2 30753183
    464952 6fi9:C (2.8) BS01 ZN ? GO:0003677 ... A2RNS2 30753183
    464953 6fi9:C (2.8) BS02 ZN ? GO:0003677 ... A2RNS2 30753183
    464954 6fi9:D (2.8) BS01 ZN ? GO:0003677 ... A2RNS2 30753183
    464955 6fi9:D (2.8) BS02 ZN ? GO:0003677 ... A2RNS2 30753183
    464956 6fi9:E (2.8) BS01 ZN ? GO:0003677 ... A2RNS2 30753183
    464957 6fi9:E (2.8) BS02 ZN ? GO:0003677 ... A2RNS2 30753183
    464958 6fi9:F (2.8) BS01 ZN ? GO:0003677 ... A2RNS2 30753183
    464959 6fi9:G (2.8) BS01 ZN ? GO:0003677 ... A2RNS2 30753183
    464960 6fi9:H (2.8) BS01 ZN ? GO:0003677 ... A2RNS2 30753183
    464961 6fic:T (2.18) BS01 DKH 2.3.1.48
    2.7.11.1
    GO:0004402 ... P21675 N/A
    464962 6fic:T (2.18) BS02 DKH 2.3.1.48
    2.7.11.1
    GO:0004402 ... P21675 N/A
    464963 6fid:A (2.2) BS01 CA 3.4.21.4 GO:0004175 ... P00760 29979188
    464964 6fie:B (1.51) BS01 CA ? GO:0005499 ... P05937 30289411
    464965 6fie:B (1.51) BS02 CA ? GO:0005499 ... P05937 30289411
    464966 6fie:B (1.51) BS03 CA ? GO:0005499 ... P05937 30289411
    464967 6fie:B (1.51) BS04 CA ? GO:0005499 ... P05937 30289411
    464968 6fig:A (1.48) BS01 CA 2.7.11.1 GO:0004714 ... Q9SR05 29968676
    464969 6fig:A (1.48) BS02 CA 2.7.11.1 GO:0004714 ... Q9SR05 29968676
    464970 6fig:B (1.48) BS01 CA 2.7.11.1 GO:0004714 ... Q9SR05 29968676
    464971 6fig:B (1.48) BS02 CA 2.7.11.1 GO:0004714 ... Q9SR05 29968676
    464972 6fih:A (1.08) BS01 CA 2.7.11.1 GO:0004714 ... Q3E8W4 29968676
    464973 6fih:A (1.08) BS02 CA 2.7.11.1 GO:0004714 ... Q3E8W4 29968676
    464974 6fii:A (2.405) BS01 GTP 3.6.5.- GO:0000226 ... P81947 29844393
    464975 6fii:A (2.405) BS02 CA 3.6.5.- GO:0000226 ... P81947 29844393
    464976 6fii:B (2.405) BS01 GDP ? GO:0000226 ... Q6B856 29844393
    464977 6fii:C (2.405) BS01 GTP 3.6.5.- GO:0000226 ... P81947 29844393
    464978 6fii:C (2.405) BS02 CA 3.6.5.- GO:0000226 ... P81947 29844393
    464979 6fii:D (2.405) BS01 GDP ? GO:0000226 ... Q6B856 29844393
    464980 6fii:D (2.405) BS02 SG9 ? GO:0000226 ... Q6B856 29844393 MOAD: Kd=9.5nM
    464981 6fii:F (2.405) BS01 ACP N/A GO:0036211 ... N/A 29844393
    464982 6fij:B (2.77) BS01 MG 2.3.1.- GO:0004315 ... Q6DQW3 29610486
    464983 6fil:A (1.73) BS01 D6W 2.7.10.1 GO:0004672 ... Q08345 30452219 MOAD: ic50=1.41uM
    464984 6fin:A (1.67) BS01 DJQ 2.7.10.1 GO:0004672 ... Q08345 30452219 BindingDB: IC50=13.8nM
    464985 6fio:A (1.99) BS01 DJH 2.7.10.1 GO:0004672 ... Q08345 30452219 MOAD: ic50=0.03uM
    BindingDB: IC50=30.3nM
    464986 6fiq:A (1.79) BS01 DJW 2.7.10.1 GO:0004672 ... Q08345 30452219 BindingDB: IC50=120nM
    464987 6fir:A (2.5) BS01 MG 2.7.1.77
    3.1.3.5
    3.1.3.99
    GO:0000255 ... P49902 30798051
    464988 6fis:A (2.3) BS01 MG 2.7.1.77
    3.1.3.5
    3.1.3.99
    GO:0000255 ... P49902 30798051
    464989 6fit:A (2.6) BS01 AMW 2.7.7.51
    3.6.1.29
    3.6.2.1
    3.9.1.-
    GO:0000166 ... P49789 9323207
    464990 6fiu:A (2.5) BS01 MG 2.7.1.77
    3.1.3.5
    3.1.3.99
    GO:0000255 ... P49902 30798051
    464991 6fiv:A (1.9) BS01 3TL 2.7.7.-
    2.7.7.49
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.-
    3.6.1.23
    GO:0004190 ... P16088 10651036 MOAD: Ki=8.3nM
    464992 6fiw:A (2.2) BS01 MG 2.7.1.77
    3.1.3.5
    3.1.3.99
    GO:0000255 ... P49902 30798051
    464993 6fix:A (3.8) BS01 dna N/A GO:0003677 ... N/A 30814507
    464994 6fix:A (3.8) BS02 dna N/A GO:0003677 ... N/A 30814507
    464995 6fix:B (3.8) BS01 dna N/A GO:0003677 ... N/A 30814507
    464996 6fix:B (3.8) BS02 dna N/A GO:0003677 ... N/A 30814507
    464997 6fix:D (3.8) BS01 dna N/A GO:0003677 ... N/A 30814507
    464998 6fix:D (3.8) BS02 dna N/A GO:0003677 ... N/A 30814507
    464999 6fix:E (3.8) BS01 dna N/A GO:0003677 ... N/A 30814507
    465000 6fix:E (3.8) BS02 dna N/A GO:0003677 ... N/A 30814507

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).