SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    465001 6fiy:A (1.09) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 30072383
    465002 6fiy:B (1.09) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 30072383
    465003 6fiz:A (2.63) BS01 GLY ? GO:0005267 ... Q81HW2 N/A
    465004 6fiz:C (2.63) BS01 GLY ? GO:0005267 ... Q81HW2 N/A
    465005 6fiz:D (2.63) BS01 GLY ? GO:0005267 ... Q81HW2 N/A
    465006 6fiz:D (2.63) BS02 GLY ? GO:0005267 ... Q81HW2 N/A
    465007 6fiz:E (2.63) BS01 GLY ? GO:0005267 ... Q81HW2 N/A
    465008 6fiz:G (2.63) BS01 GLY ? GO:0005267 ... Q81HW2 N/A
    465009 6fiz:H (2.63) BS01 GLY ? GO:0005267 ... Q81HW2 N/A
    465010 6fiz:J (2.63) BS01 GLY ? GO:0005267 ... Q81HW2 N/A
    465011 6fiz:L (2.63) BS01 GLY ? GO:0005267 ... Q81HW2 N/A
    465012 6fiz:N (2.63) BS01 GLY ? GO:0005267 ... Q81HW2 N/A
    465013 6fiz:O (2.63) BS01 GLY ? GO:0005267 ... Q81HW2 N/A
    465014 6fiz:P (2.63) BS01 GLY ? GO:0005267 ... Q81HW2 N/A
    465015 6fj0:A (1.659) BS01 A3N 2.7.11.24 GO:0000165 ... P63086 N/A
    465016 6fj1:A (2.69) BS01 NXL N/A GO:0016740 ... N/A 29601108
    465017 6fj1:B (2.69) BS01 NXL N/A GO:0016740 ... N/A 29601108
    465018 6fj1:C (2.69) BS01 NXL N/A GO:0016740 ... N/A 29601108
    465019 6fj2:A (1.43) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 29979188
    465020 6fj2:A (1.43) BS02 CA 3.4.24.27 GO:0004222 ... P00800 29979188
    465021 6fj2:A (1.43) BS03 CA 3.4.24.27 GO:0004222 ... P00800 29979188
    465022 6fj2:A (1.43) BS04 CA 3.4.24.27 GO:0004222 ... P00800 29979188
    465023 6fj2:A (1.43) BS05 CA 3.4.24.27 GO:0004222 ... P00800 29979188
    465024 6fj2:A (1.43) BS06 TMO 3.4.24.27 GO:0004222 ... P00800 29979188
    465025 6fj2:A (1.43) BS07 TMO 3.4.24.27 GO:0004222 ... P00800 29979188
    465026 6fj2:A (1.43) BS08 VAL 3.4.24.27 GO:0004222 ... P00800 29979188
    465027 6fj2:A (1.43) BS09 LYS 3.4.24.27 GO:0004222 ... P00800 29979188
    465028 6fj3:A (2.5) BS01 FUC ? GO:0004888 ... Q03431
    Q9V2J8
    30455434
    465029 6fj3:A (2.5) BS02 FUC ? GO:0004888 ... Q03431
    Q9V2J8
    30455434
    465030 6fj5:A (2.051) BS01 dna ? GO:0000976 ... P04637 30057026
    465031 6fj5:A (2.051) BS02 dna ? GO:0000976 ... P04637 30057026
    465032 6fj5:A (2.051) BS03 ZN ? GO:0000976 ... P04637 30057026
    465033 6fj5:B (2.051) BS01 dna ? GO:0000976 ... P04637 30057026
    465034 6fj5:B (2.051) BS02 dna ? GO:0000976 ... P04637 30057026
    465035 6fj5:B (2.051) BS03 ZN ? GO:0000976 ... P04637 30057026
    465036 6fj5:C (2.051) BS01 dna ? GO:0000976 ... P04637 30057026
    465037 6fj5:C (2.051) BS02 dna ? GO:0000976 ... P04637 30057026
    465038 6fj5:C (2.051) BS03 ZN ? GO:0000976 ... P04637 30057026
    465039 6fj5:D (2.051) BS01 dna ? GO:0000976 ... P04637 30057026
    465040 6fj5:D (2.051) BS02 dna ? GO:0000976 ... P04637 30057026
    465041 6fj5:D (2.051) BS03 ZN ? GO:0000976 ... P04637 30057026
    465042 6fja:A (2.2) BS01 CU 1.7.2.1 GO:0005507 ... I6NAW4 N/A
    465043 6fja:A (2.2) BS02 HEM 1.7.2.1 GO:0005507 ... I6NAW4 N/A
    465044 6fjb:A (1.85) BS01 AOC 2.7.11.24 GO:0000165 ... P63086 N/A
    465045 6fje:A (1.85) BS01 FRU ? GO:0004553 ... J7HDY4 31767902
    465046 6fje:A (1.85) BS02 GLC ? GO:0004553 ... J7HDY4 31767902
    465047 6fje:A (1.85) BS03 GLC ? GO:0004553 ... J7HDY4 31767902
    465048 6fje:A (1.85) BS04 GLC ? GO:0004553 ... J7HDY4 31767902
    465049 6fje:B (1.85) BS01 MAN ? GO:0004553 ... J7HDY4 31767902
    465050 6fje:B (1.85) BS02 FRU ? GO:0004553 ... J7HDY4 31767902
    465051 6fje:B (1.85) BS03 GLC ? GO:0004553 ... J7HDY4 31767902
    465052 6fje:B (1.85) BS04 GLC ? GO:0004553 ... J7HDY4 31767902
    465053 6fje:B (1.85) BS05 GLC ? GO:0004553 ... J7HDY4 31767902
    465054 6fje:B (1.85) BS06 GLC ? GO:0004553 ... J7HDY4 31767902
    465055 6fjf:A (2.402) BS01 GTP 3.6.5.- GO:0000226 ... P81947 29844393
    465056 6fjf:A (2.402) BS02 CA 3.6.5.- GO:0000226 ... P81947 29844393
    465057 6fjf:B (2.402) BS01 GDP ? GO:0000226 ... Q6B856 29844393
    465058 6fjf:C (2.402) BS01 GTP 3.6.5.- GO:0000226 ... P81947 29844393
    465059 6fjf:C (2.402) BS02 CA 3.6.5.- GO:0000226 ... P81947 29844393
    465060 6fjf:D (2.402) BS01 GDP ? GO:0000226 ... Q6B856 29844393
    465061 6fjf:D (2.402) BS02 DKE ? GO:0000226 ... Q6B856 29844393 MOAD: Kd=6.8nM
    465062 6fjf:F (2.402) BS01 ACP N/A GO:0036211 ... N/A 29844393
    465063 6fjg:A (1.73) BS01 FRU ? GO:0004553 ... J7HDY4 31767902
    465064 6fjg:A (1.73) BS02 NPO ? GO:0004553 ... J7HDY4 31767902
    465065 6fjg:B (1.73) BS01 FRU ? GO:0004553 ... J7HDY4 31767902
    465066 6fjg:B (1.73) BS02 NPO ? GO:0004553 ... J7HDY4 31767902
    465067 6fjh:A (3.15) BS01 FAD ? GO:0000166 ... G4V2H3 30266997
    465068 6fjh:B (3.15) BS01 FAD ? GO:0000166 ... G4V2H3 30266997
    465069 6fji:A (1.6) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 30639924
    465070 6fjj:A (1.5) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 30639924
    465071 6fjj:A (1.5) BS02 LSA 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 30639924 MOAD: Ki=100nM
    BindingDB: Ki=5950nM
    465072 6fjk:A (2.025) BS01 IHP 2.7.1.158 GO:0005524 ... Q93YN9 30160967
    465073 6fjk:A (2.025) BS02 ADP 2.7.1.158 GO:0005524 ... Q93YN9 30160967
    465074 6fjk:A (2.025) BS03 ZN 2.7.1.158 GO:0005524 ... Q93YN9 30160967
    465075 6fjk:B (2.025) BS01 IHP 2.7.1.158 GO:0005524 ... Q93YN9 30160967
    465076 6fjk:B (2.025) BS02 ADP 2.7.1.158 GO:0005524 ... Q93YN9 30160967
    465077 6fjk:B (2.025) BS03 MG 2.7.1.158 GO:0005524 ... Q93YN9 30160967
    465078 6fjk:B (2.025) BS04 ZN 2.7.1.158 GO:0005524 ... Q93YN9 30160967
    465079 6fjm:A (2.1) BS01 GTP 3.6.5.- GO:0000226 ... P81947 29844393
    465080 6fjm:A (2.1) BS02 CA 3.6.5.- GO:0000226 ... P81947 29844393
    465081 6fjm:B (2.1) BS01 GDP ? GO:0000226 ... Q6B856 29844393
    465082 6fjm:C (2.1) BS01 GTP 3.6.5.- GO:0000226 ... P81947 29844393
    465083 6fjm:C (2.1) BS02 CA 3.6.5.- GO:0000226 ... P81947 29844393
    465084 6fjm:D (2.1) BS01 GDP ? GO:0000226 ... Q6B856 29844393
    465085 6fjm:D (2.1) BS02 DKN ? GO:0000226 ... Q6B856 29844393 MOAD: Kd=576nM
    465086 6fjm:F (2.1) BS01 ACP N/A GO:0036211 ... N/A 29844393
    465087 6fjm:F (2.1) BS02 MG N/A GO:0036211 ... N/A 29844393
    465088 6fjo:A (1.17) BS01 GLU ? GO:0007155 ... A4ZKM1 31517055
    465089 6fjs:A (1.9) BS01 CA 3.4.21.64 GO:0004252 ... P06873 30224955
    465090 6fjs:A (1.9) BS02 CA 3.4.21.64 GO:0004252 ... P06873 30224955
    465091 6fjt:H (1.27) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 N/A
    465092 6fjt:H (1.27) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 N/A
    465093 6fjt:H (1.27) BS03 DKQ 3.4.21.5 GO:0004252 ... P00734 N/A
    465094 6fju:A (1.65) BS01 ZN ? GO:0000502 ... E6N8B9 30002364
    465095 6fju:B (1.65) BS01 ZN ? GO:0000502 ... E6N8B9 30002364
    465096 6fjz:A (1.864) BS01 DKW 2.7.11.24 GO:0000165 ... P63086 N/A
    465097 6fk2:A (1.01) BS01 SOR ? GO:0030246 ... P17931 N/A
    465098 6fk2:A (1.01) BS02 GAL ? GO:0030246 ... P17931 N/A
    465099 6fk4:A (2.297) BS01 dna 3.1.11.2 GO:0003677 ... Q9K100 30329088
    465100 6fk5:A (2.02) BS01 dna 3.1.11.2 GO:0003677 ... Q9K100 30329088
    465101 6fk5:A (2.02) BS02 MG 3.1.11.2 GO:0003677 ... Q9K100 30329088
    465102 6fk6:A (2.36) BS01 DOK ? GO:0000139 ... P02699 29555765
    465103 6fk7:A (2.62) BS01 DO5 ? GO:0000139 ... P02699 29555765
    465104 6fk8:A (2.87) BS01 DNZ ? GO:0000139 ... P02699 29555765
    465105 6fk9:A (2.63) BS01 DNK ? GO:0000139 ... P02699 29555765
    465106 6fka:A (2.7) BS01 DN5 ? GO:0000139 ... P02699 29555765
    465107 6fkb:A (3.03) BS01 DLH ? GO:0000139 ... P02699 29555765
    465108 6fkc:A (2.46) BS01 DLB ? GO:0000139 ... P02699 29555765
    465109 6fkd:A (2.49) BS01 DL2 ? GO:0000139 ... P02699 29555765
    465110 6fke:A (2.151) BS01 dna 3.1.11.2 GO:0003677 ... Q9K100 30329088
    465111 6fke:A (2.151) BS02 MN 3.1.11.2 GO:0003677 ... Q9K100 30329088
    465112 6fkf:A (3.15) BS01 ATP 7.1.2.2 GO:0005524 ... P06450 29748256
    465113 6fkf:C (3.15) BS01 ATP 7.1.2.2 GO:0005524 ... P06450 29748256
    465114 6fkf:D (3.15) BS01 ADP 7.1.2.2 GO:0005524 ... P00825 29748256
    465115 6fkf:E (3.15) BS01 ATP 7.1.2.2 GO:0005524 ... P06450 29748256
    465116 6fkf:E (3.15) BS02 ADP 7.1.2.2 GO:0005524 ... P06450 29748256
    465117 6fkf:F (3.15) BS01 ADP 7.1.2.2 GO:0005524 ... P00825 29748256
    465118 6fkh:A (4.2) BS01 ATP 7.1.2.2 GO:0005524 ... P06450 29748256
    465119 6fkh:B (4.2) BS01 ADP 7.1.2.2 GO:0005524 ... P00825 29748256
    465120 6fkh:B (4.2) BS02 MG 7.1.2.2 GO:0005524 ... P00825 29748256
    465121 6fkh:C (4.2) BS01 ATP 7.1.2.2 GO:0005524 ... P06450 29748256
    465122 6fkh:E (4.2) BS01 ATP 7.1.2.2 GO:0005524 ... P06450 29748256
    465123 6fkh:F (4.2) BS01 ADP 7.1.2.2 GO:0005524 ... P00825 29748256
    465124 6fki:A (4.3) BS01 ATP 7.1.2.2 GO:0005524 ... P06450 29748256
    465125 6fki:B (4.3) BS01 ADP 7.1.2.2 GO:0005524 ... P00825 29748256
    465126 6fki:C (4.3) BS01 ATP 7.1.2.2 GO:0005524 ... P06450 29748256
    465127 6fki:D (4.3) BS01 ADP 7.1.2.2 GO:0005524 ... P00825 29748256
    465128 6fki:D (4.3) BS02 MG 7.1.2.2 GO:0005524 ... P00825 29748256
    465129 6fki:E (4.3) BS01 ATP 7.1.2.2 GO:0005524 ... P06450 29748256
    465130 6fkj:A (2.148) BS01 GTP 3.6.5.- GO:0000226 ... P81947 29523799
    465131 6fkj:A (2.148) BS02 CA 3.6.5.- GO:0000226 ... P81947 29523799
    465132 6fkj:B (2.148) BS01 DLW ? GO:0000226 ... Q6B856 29523799
    465133 6fkj:B (2.148) BS02 GDP ? GO:0000226 ... Q6B856 29523799
    465134 6fkj:C (2.148) BS01 GTP 3.6.5.- GO:0000226 ... P81947 29523799
    465135 6fkj:C (2.148) BS02 CA 3.6.5.- GO:0000226 ... P81947 29523799
    465136 6fkj:D (2.148) BS01 DLW ? GO:0000226 ... Q6B856 29523799
    465137 6fkj:D (2.148) BS02 GDP ? GO:0000226 ... Q6B856 29523799
    465138 6fkj:F (2.148) BS01 MG N/A GO:0036211 ... N/A 29523799
    465139 6fkj:F (2.148) BS02 ACP N/A GO:0036211 ... N/A 29523799
    465140 6fkk:A (2.78) BS01 MAN ? GO:0030215 ... Q7KK54 31417095
    465141 6fkl:A (2.098) BS01 GTP 3.6.5.- GO:0000226 ... P81947 29523799
    465142 6fkl:A (2.098) BS02 CA 3.6.5.- GO:0000226 ... P81947 29523799
    465143 6fkl:B (2.098) BS01 GDP ? GO:0000226 ... Q6B856 29523799
    465144 6fkl:B (2.098) BS02 DLK ? GO:0000226 ... Q6B856 29523799
    465145 6fkl:C (2.098) BS01 GTP 3.6.5.- GO:0000226 ... P81947 29523799
    465146 6fkl:C (2.098) BS02 CA 3.6.5.- GO:0000226 ... P81947 29523799
    465147 6fkl:D (2.098) BS01 GDP ? GO:0000226 ... Q6B856 29523799
    465148 6fkl:D (2.098) BS02 DLK ? GO:0000226 ... Q6B856 29523799
    465149 6fkl:F (2.098) BS01 MG N/A GO:0036211 ... N/A 29523799
    465150 6fkl:F (2.098) BS02 ACP N/A GO:0036211 ... N/A 29523799
    465151 6fko:A (2.1) BS01 HDA 6.3.4.25 GO:0000166 ... G3FFN6 N/A
    465152 6fko:A (2.1) BS02 DGP 6.3.4.25 GO:0000166 ... G3FFN6 N/A
    465153 6fko:A (2.1) BS03 ATP 6.3.4.25 GO:0000166 ... G3FFN6 N/A
    465154 6fko:B (2.1) BS01 DGP 6.3.4.25 GO:0000166 ... G3FFN6 N/A
    465155 6fko:B (2.1) BS02 ATP 6.3.4.25 GO:0000166 ... G3FFN6 N/A
    465156 6fkp:A (2.0) BS01 peptide ? N/A Q9UIF9 29529862
    465157 6fkp:A (2.0) BS02 ZN ? N/A Q9UIF9 29529862
    465158 6fkp:A (2.0) BS03 ZN ? N/A Q9UIF9 29529862
    465159 6fkp:B (2.0) BS01 ZN ? N/A Q9UIF9 29529862
    465160 6fkp:B (2.0) BS02 ZN ? N/A Q9UIF9 29529862
    465161 6fkp:C (2.0) BS01 peptide ? N/A Q9UIF9 29529862
    465162 6fkp:C (2.0) BS02 ZN ? N/A Q9UIF9 29529862
    465163 6fkp:C (2.0) BS03 ZN ? N/A Q9UIF9 29529862
    465164 6fkp:D (2.0) BS01 peptide ? N/A Q9UIF9 29529862
    465165 6fkp:D (2.0) BS02 ZN ? N/A Q9UIF9 29529862
    465166 6fkp:D (2.0) BS03 ZN ? N/A Q9UIF9 29529862
    465167 6fkq:A (3.07) BS01 peptide ? N/A O95631 29503192
    465168 6fkq:A (3.07) BS02 CA ? N/A O95631 29503192
    465169 6fkr:10 (3.2) BS01 rna ? GO:0003735 ... P60493 29526712
    465170 6fkr:10 (3.2) BS02 rna ? GO:0003735 ... P60493 29526712
    465171 6fkr:10 (3.2) BS03 MG ? GO:0003735 ... P60493 29526712
    465172 6fkr:10 (3.2) BS04 MG ? GO:0003735 ... P60493 29526712
    465173 6fkr:11 (3.2) BS01 rna ? GO:0003735 ... P60494 29526712
    465174 6fkr:11 (3.2) BS02 MG ? GO:0003735 ... P60494 29526712
    465175 6fkr:12 (3.2) BS01 rna ? GO:0003735 ... Q5SHP6 29526712
    465176 6fkr:13 (3.2) BS01 rna ? GO:0003735 ... Q5SHQ6 29526712
    465177 6fkr:13 (3.2) BS02 rna ? GO:0003735 ... Q5SHQ6 29526712
    465178 6fkr:13 (3.2) BS03 MG ? GO:0003735 ... Q5SHQ6 29526712
    465179 6fkr:13 (3.2) BS04 MG ? GO:0003735 ... Q5SHQ6 29526712
    465180 6fkr:14 (3.2) BS01 rna ? GO:0003735 ... Q5SJE1 29526712
    465181 6fkr:14 (3.2) BS02 ZN ? GO:0003735 ... Q5SJE1 29526712
    465182 6fkr:15 (3.2) BS01 rna ? GO:0003735 ... P80339 29526712
    465183 6fkr:15 (3.2) BS02 ZN ? GO:0003735 ... P80339 29526712
    465184 6fkr:16 (3.2) BS01 rna ? GO:0000049 ... P35871 29526712
    465185 6fkr:16 (3.2) BS02 ZN ? GO:0000049 ... P35871 29526712
    465186 6fkr:17 (3.2) BS01 rna ? GO:0003735 ... P80340 29526712
    465187 6fkr:17 (3.2) BS02 MG ? GO:0003735 ... P80340 29526712
    465188 6fkr:18 (3.2) BS01 rna ? GO:0003735 ... Q5SKU1 29526712
    465189 6fkr:18 (3.2) BS02 MG ? GO:0003735 ... Q5SKU1 29526712
    465190 6fkr:18 (3.2) BS03 MG ? GO:0003735 ... Q5SKU1 29526712
    465191 6fkr:19 (3.2) BS01 rna ? GO:0003735 ... Q5SHR2 29526712
    465192 6fkr:19 (3.2) BS02 ZN ? GO:0003735 ... Q5SHR2 29526712
    465193 6fkr:1D (3.2) BS01 rna ? GO:0002181 ... P60405 29526712
    465194 6fkr:1D (3.2) BS02 MG ? GO:0002181 ... P60405 29526712
    465195 6fkr:1D (3.2) BS03 MG ? GO:0002181 ... P60405 29526712
    465196 6fkr:1D (3.2) BS04 MG ? GO:0002181 ... P60405 29526712
    465197 6fkr:1D (3.2) BS05 MG ? GO:0002181 ... P60405 29526712
    465198 6fkr:1D (3.2) BS06 MG ? GO:0002181 ... P60405 29526712
    465199 6fkr:1D (3.2) BS07 MG ? GO:0002181 ... P60405 29526712
    465200 6fkr:1D (3.2) BS08 MG ? GO:0002181 ... P60405 29526712

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).