SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    466001 6foz:A (2.15) BS02 E0H 1.14.13.9 GO:0003824 ... Q84HF5 31372510
    466002 6foz:B (2.15) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 31372510
    466003 6foz:B (2.15) BS02 E0H 1.14.13.9 GO:0003824 ... Q84HF5 31372510
    466004 6fp0:A (2.03) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 31372510
    466005 6fp0:B (2.03) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 31372510
    466006 6fp0:B (2.03) BS02 E0N 1.14.13.9 GO:0003824 ... Q84HF5 31372510
    466007 6fp1:A (1.97) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 31372510
    466008 6fp1:A (1.97) BS02 E0Q 1.14.13.9 GO:0003824 ... Q84HF5 31372510
    466009 6fp1:B (1.97) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 31372510
    466010 6fp1:B (1.97) BS02 E0Q 1.14.13.9 GO:0003824 ... Q84HF5 31372510
    466011 6fp3:A (1.976) BS01 FAD ? GO:0000166 ... Q9KHK2 29686059
    466012 6fp3:A (1.976) BS02 OXY ? GO:0000166 ... Q9KHK2 29686059
    466013 6fp3:B (1.976) BS01 FAD ? GO:0000166 ... Q9KHK2 29686059
    466014 6fp3:B (1.976) BS02 OXY ? GO:0000166 ... Q9KHK2 29686059
    466015 6fp3:C (1.976) BS01 FAD ? GO:0000166 ... Q9KHK2 29686059
    466016 6fp3:C (1.976) BS02 OXY ? GO:0000166 ... Q9KHK2 29686059
    466017 6fp3:D (1.976) BS01 FAD ? GO:0000166 ... Q9KHK2 29686059
    466018 6fp3:D (1.976) BS02 OXY ? GO:0000166 ... Q9KHK2 29686059
    466019 6fp4:A (2.501) BS01 FAD N/A GO:0004791 ... N/A 29800515
    466020 6fp4:A (2.501) BS02 E1T N/A GO:0004791 ... N/A 29800515 MOAD: ic50=1.1mM
    466021 6fp4:A (2.501) BS03 250 N/A GO:0004791 ... N/A 29800515
    466022 6fp5:A (2.0) BS01 ZN ? GO:0005634 ... Q960Q9 33638995
    466023 6fp5:B (2.0) BS01 ZN ? GO:0005634 ... Q960Q9 33638995
    466024 6fp6:A (3.0) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 30735496
    466025 6fp6:B (3.0) BS01 ZN ? GO:0005507 ... O14618 30735496
    466026 6fp6:C (3.0) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 30735496
    466027 6fp6:D (3.0) BS01 ZN ? GO:0005507 ... O14618 30735496
    466028 6fp6:E (3.0) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 30735496
    466029 6fp6:F (3.0) BS01 ZN ? GO:0005507 ... O14618 30735496
    466030 6fp6:G (3.0) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 30735496
    466031 6fp6:H (3.0) BS01 ZN ? GO:0005507 ... O14618 30735496
    466032 6fp6:I (3.0) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 30735496
    466033 6fp6:J (3.0) BS01 ZN ? GO:0005507 ... O14618 30735496
    466034 6fp6:K (3.0) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 30735496
    466035 6fp6:L (3.0) BS01 ZN ? GO:0005507 ... O14618 30735496
    466036 6fp6:M (3.0) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 30735496
    466037 6fp6:N (3.0) BS01 ZN ? GO:0005507 ... O14618 30735496
    466038 6fp6:O (3.0) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 30735496
    466039 6fp6:P (3.0) BS01 ZN ? GO:0005507 ... O14618 30735496
    466040 6fp6:Q (3.0) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 30735496
    466041 6fp6:R (3.0) BS01 ZN ? GO:0005507 ... O14618 30735496
    466042 6fp6:S (3.0) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 30735496
    466043 6fp6:T (3.0) BS01 ZN ? GO:0005507 ... O14618 30735496
    466044 6fp6:U (3.0) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 30735496
    466045 6fp6:V (3.0) BS01 ZN ? GO:0005507 ... O14618 30735496
    466046 6fp6:W (3.0) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 30735496
    466047 6fp6:X (3.0) BS01 ZN ? GO:0005507 ... O14618 30735496
    466048 6fpc:A (1.75) BS01 ZN 3.4.24.89 GO:0005576 ... K4ZRC1 29794027
    466049 6fpc:B (1.75) BS01 ZN 3.4.24.89 GO:0005576 ... K4ZRC1 29794027
    466050 6fpc:C (1.75) BS01 ZN 3.4.24.89 GO:0005576 ... K4ZRC1 29794027
    466051 6fpc:D (1.75) BS01 ZN 3.4.24.89 GO:0005576 ... K4ZRC1 29794027
    466052 6fph:A (2.0) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 31372510
    466053 6fph:A (2.0) BS02 E1W 1.14.13.9 GO:0003824 ... Q84HF5 31372510
    466054 6fph:B (2.0) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 31372510
    466055 6fph:B (2.0) BS02 E1W 1.14.13.9 GO:0003824 ... Q84HF5 31372510
    466056 6fpi:L (1.5) BS01 EJ2 1.12.99.6 GO:0005515 ... P0ACD8 30070475
    466057 6fpi:L (1.5) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 30070475
    466058 6fpi:M (1.5) BS01 EJ2 1.12.99.6 GO:0005515 ... P0ACD8 30070475
    466059 6fpi:M (1.5) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 30070475
    466060 6fpi:S (1.5) BS01 SF4 1.12.99.6 GO:0005515 ... P69739 30070475
    466061 6fpi:S (1.5) BS02 F3S 1.12.99.6 GO:0005515 ... P69739 30070475
    466062 6fpi:S (1.5) BS03 SF3 1.12.99.6 GO:0005515 ... P69739 30070475
    466063 6fpi:T (1.5) BS01 SF4 1.12.99.6 GO:0005515 ... P69739 30070475
    466064 6fpi:T (1.5) BS02 F3S 1.12.99.6 GO:0005515 ... P69739 30070475
    466065 6fpi:T (1.5) BS03 SF3 1.12.99.6 GO:0005515 ... P69739 30070475
    466066 6fpl:A (1.602) BS01 TAC ? GO:0000976 ... P0ACT4 32114262
    466067 6fpm:A (1.85) BS01 TAC ? GO:0000976 ... P0ACT4 32114262
    466068 6fpo:L (1.05) BS01 FCO 1.12.99.6 GO:0005515 ... P0ACD8 30070475
    466069 6fpo:L (1.05) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 30070475
    466070 6fpo:M (1.05) BS01 FCO 1.12.99.6 GO:0005515 ... P0ACD8 30070475
    466071 6fpo:M (1.05) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 30070475
    466072 6fpo:S (1.05) BS01 SF4 1.12.99.6 GO:0005515 ... P69739 30070475
    466073 6fpo:S (1.05) BS02 F3S 1.12.99.6 GO:0005515 ... P69739 30070475
    466074 6fpo:S (1.05) BS03 SF3 1.12.99.6 GO:0005515 ... P69739 30070475
    466075 6fpo:T (1.05) BS01 SF4 1.12.99.6 GO:0005515 ... P69739 30070475
    466076 6fpo:T (1.05) BS02 F3S 1.12.99.6 GO:0005515 ... P69739 30070475
    466077 6fpo:T (1.05) BS03 SF3 1.12.99.6 GO:0005515 ... P69739 30070475
    466078 6fpq:A (1.42) BS01 rna ? GO:0003723 ... O74958 29695507
    466079 6fpu:A (1.36) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 29939431
    466080 6fpu:A (1.36) BS02 E48 2.4.2.29 GO:0002099 ... P28720 29939431 MOAD: Kd=321nM
    466081 6fpw:L (1.35) BS01 EJ2 1.12.99.6 GO:0005515 ... P0ACD8 30070475
    466082 6fpw:L (1.35) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 30070475
    466083 6fpw:M (1.35) BS01 EJ2 1.12.99.6 GO:0005515 ... P0ACD8 30070475
    466084 6fpw:M (1.35) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 30070475
    466085 6fpw:S (1.35) BS01 SF4 1.12.99.6 GO:0005515 ... P69739 30070475
    466086 6fpw:S (1.35) BS02 F3S 1.12.99.6 GO:0005515 ... P69739 30070475
    466087 6fpw:S (1.35) BS03 SF3 1.12.99.6 GO:0005515 ... P69739 30070475
    466088 6fpw:T (1.35) BS01 SF4 1.12.99.6 GO:0005515 ... P69739 30070475
    466089 6fpw:T (1.35) BS02 F3S 1.12.99.6 GO:0005515 ... P69739 30070475
    466090 6fpw:T (1.35) BS03 SF3 1.12.99.6 GO:0005515 ... P69739 30070475
    466091 6fpx:A (1.97) BS01 rna ? GO:0003723 ... O74958 29695507
    466092 6fpx:C (1.97) BS01 rna ? GO:0003723 ... O74958 29695507
    466093 6fpx:E (1.97) BS01 rna ? GO:0003723 ... O74958 29695507
    466094 6fpy:A (2.339) BS01 MG ? N/A P19827 N/A
    466095 6fpy:B (2.339) BS01 MG ? N/A P19827 N/A
    466096 6fq3:A (1.901) BS01 rna 2.3.2.27 N/A E7FAM5 29674686
    466097 6fq4:A (2.89) BS01 peptide ? GO:0003779 ... P12003 29710402
    466098 6fq5:A (3.8) BS01 dna ? GO:0000786 ... P84233 29626188
    466099 6fq5:A (3.8) BS02 dna ? GO:0000786 ... P84233 29626188
    466100 6fq5:B (3.8) BS01 dna ? GO:0003677 ... P62799 29626188
    466101 6fq5:B (3.8) BS02 dna ? GO:0003677 ... P62799 29626188
    466102 6fq5:C (3.8) BS01 dna ? GO:0000786 ... P06897 29626188
    466103 6fq5:C (3.8) BS02 dna ? GO:0000786 ... P06897 29626188
    466104 6fq5:D (3.8) BS01 dna ? GO:0000786 ... P02281 29626188
    466105 6fq5:D (3.8) BS02 dna ? GO:0000786 ... P02281 29626188
    466106 6fq5:E (3.8) BS01 dna ? GO:0000786 ... P84233 29626188
    466107 6fq5:E (3.8) BS02 dna ? GO:0000786 ... P84233 29626188
    466108 6fq5:F (3.8) BS01 dna ? GO:0003677 ... P62799 29626188
    466109 6fq5:F (3.8) BS02 dna ? GO:0003677 ... P62799 29626188
    466110 6fq5:G (3.8) BS01 dna ? GO:0000786 ... P06897 29626188
    466111 6fq5:G (3.8) BS02 dna ? GO:0000786 ... P06897 29626188
    466112 6fq5:H (3.8) BS01 dna ? GO:0000786 ... P02281 29626188
    466113 6fq5:H (3.8) BS02 dna ? GO:0000786 ... P02281 29626188
    466114 6fq6:A (4.0) BS01 dna ? GO:0000786 ... P84233 29626188
    466115 6fq6:A (4.0) BS02 dna ? GO:0000786 ... P84233 29626188
    466116 6fq6:B (4.0) BS01 dna ? GO:0003677 ... P62799 29626188
    466117 6fq6:B (4.0) BS02 dna ? GO:0003677 ... P62799 29626188
    466118 6fq6:C (4.0) BS01 dna ? GO:0000786 ... P06897 29626188
    466119 6fq6:C (4.0) BS02 dna ? GO:0000786 ... P06897 29626188
    466120 6fq6:D (4.0) BS01 dna ? GO:0000786 ... P02281 29626188
    466121 6fq6:D (4.0) BS02 dna ? GO:0000786 ... P02281 29626188
    466122 6fq6:E (4.0) BS01 dna ? GO:0000786 ... P84233 29626188
    466123 6fq6:E (4.0) BS02 dna ? GO:0000786 ... P84233 29626188
    466124 6fq6:F (4.0) BS01 dna ? GO:0003677 ... P62799 29626188
    466125 6fq6:F (4.0) BS02 dna ? GO:0003677 ... P62799 29626188
    466126 6fq6:G (4.0) BS01 dna ? GO:0000786 ... P06897 29626188
    466127 6fq6:G (4.0) BS02 dna ? GO:0000786 ... P06897 29626188
    466128 6fq6:H (4.0) BS01 dna ? GO:0000786 ... P02281 29626188
    466129 6fq6:H (4.0) BS02 dna ? GO:0000786 ... P02281 29626188
    466130 6fq7:A (1.6) BS01 E2K 2.7.11.24 GO:0000165 ... P63086 N/A
    466131 6fq8:A (4.8) BS01 dna ? GO:0000786 ... P02302 29626188
    466132 6fq8:A (4.8) BS02 dna ? GO:0000786 ... P02302 29626188
    466133 6fq8:B (4.8) BS01 dna ? GO:0003677 ... P62799 29626188
    466134 6fq8:B (4.8) BS02 dna ? GO:0003677 ... P62799 29626188
    466135 6fq8:C (4.8) BS01 dna ? GO:0000786 ... P06897 29626188
    466136 6fq8:C (4.8) BS02 dna ? GO:0000786 ... P06897 29626188
    466137 6fq8:D (4.8) BS01 dna ? GO:0000786 ... P02281 29626188
    466138 6fq8:D (4.8) BS02 dna ? GO:0000786 ... P02281 29626188
    466139 6fq8:E (4.8) BS01 dna ? GO:0000786 ... P02302 29626188
    466140 6fq8:E (4.8) BS02 dna ? GO:0000786 ... P02302 29626188
    466141 6fq8:F (4.8) BS01 dna ? GO:0003677 ... P62799 29626188
    466142 6fq8:F (4.8) BS02 dna ? GO:0003677 ... P62799 29626188
    466143 6fq8:G (4.8) BS01 dna ? GO:0000786 ... P06897 29626188
    466144 6fq8:G (4.8) BS02 dna ? GO:0000786 ... P06897 29626188
    466145 6fq8:H (4.8) BS01 dna ? GO:0000786 ... P02281 29626188
    466146 6fq8:H (4.8) BS02 dna ? GO:0000786 ... P02281 29626188
    466147 6fqb:E (3.0) BS01 GLN 3.5.1.2
    6.3.5.13
    GO:0003824 ... Q8DNZ8 30093673
    466148 6fqb:F (3.0) BS01 GLN 3.5.1.2
    6.3.5.13
    GO:0003824 ... Q8DNZ8 30093673
    466149 6fqb:G (3.0) BS01 GLN 3.5.1.2
    6.3.5.13
    GO:0003824 ... Q8DNZ8 30093673
    466150 6fqb:H (3.0) BS01 GLN 3.5.1.2
    6.3.5.13
    GO:0003824 ... Q8DNZ8 30093673
    466151 6fqd:A (2.10001) BS01 GDP 3.6.5.4 GO:0005525 ... P10121 29704493
    466152 6fqd:B (2.10001) BS01 GDP 3.6.5.4 GO:0005525 ... P10121 29704493
    466153 6fqe:A (1.75) BS01 ZN 3.1.8.1 GO:0004063 ... P0A434 N/A
    466154 6fqe:A (1.75) BS02 ZN 3.1.8.1 GO:0004063 ... P0A434 N/A
    466155 6fqe:A (1.75) BS03 D6K 3.1.8.1 GO:0004063 ... P0A434 N/A
    466156 6fqe:B (1.75) BS01 ZN 3.1.8.1 GO:0004063 ... P0A434 N/A
    466157 6fqe:B (1.75) BS02 ZN 3.1.8.1 GO:0004063 ... P0A434 N/A
    466158 6fqe:B (1.75) BS03 D6K 3.1.8.1 GO:0004063 ... P0A434 N/A
    466159 6fqf:A (2.1) BS01 HEM ? GO:0004601 ... P68871 29857171
    466160 6fqf:B (2.1) BS01 HEM ? GO:0004601 ... P68871 29857171
    466161 6fqf:C (2.1) BS01 HEM ? GO:0004601 ... P68871 29857171
    466162 6fqf:D (2.1) BS01 HEM ? GO:0004601 ... P68871 29857171
    466163 6fqg:A (2.34139) BS01 GLU ? GO:0015276 ... P19491 N/A
    466164 6fqg:B (2.34139) BS01 GLU ? GO:0015276 ... P19491 N/A
    466165 6fqh:A (1.7594) BS01 E2Q ? GO:0015276 ... P19491 31541113
    466166 6fqh:B (1.7594) BS01 E2Q ? GO:0015276 ... P19491 31541113
    466167 6fqi:A (2.91001) BS01 GLU ? GO:0015276 ... P19491 31541113
    466168 6fqi:B (2.91001) BS01 GLU ? GO:0015276 ... P19491 31541113
    466169 6fqj:A (2.50002) BS01 ZK1 ? GO:0015276 ... P19491 31541113
    466170 6fqj:B (2.50002) BS01 ZK1 ? GO:0015276 ... P19491 31541113
    466171 6fqj:C (2.50002) BS01 ZK1 ? GO:0015276 ... P19491 31541113
    466172 6fqj:D (2.50002) BS01 ZK1 ? GO:0015276 ... P19491 31541113
    466173 6fqj:E (2.50002) BS01 ZK1 ? GO:0015276 ... P19491 31541113
    466174 6fqj:F (2.50002) BS01 ZK1 ? GO:0015276 ... P19491 31541113
    466175 6fqj:G (2.50002) BS01 ZK1 ? GO:0015276 ... P19491 31541113
    466176 6fqj:H (2.50002) BS01 ZK1 ? GO:0015276 ... P19491 31541113
    466177 6fqk:A (1.9801) BS01 ZK1 ? GO:0015276 ... P19491 31541113
    466178 6fqk:B (1.9801) BS01 ZK1 ? GO:0015276 ... P19491 31541113
    466179 6fql:A (2.349) BS01 rna 2.3.2.27 N/A E7FAM5 29674686
    466180 6fqm:A (3.06) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466181 6fqm:A (3.06) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466182 6fqm:A (3.06) BS03 E32 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466183 6fqm:B (3.06) BS01 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466184 6fqm:B (3.06) BS02 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466185 6fqm:B (3.06) BS03 MN 5.6.2.2 GO:0003677 ... P66937 29538767
    466186 6fqm:C (3.06) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466187 6fqm:C (3.06) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466188 6fqm:C (3.06) BS03 E32 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466189 6fqm:D (3.06) BS01 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466190 6fqm:D (3.06) BS02 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466191 6fqm:D (3.06) BS03 MN 5.6.2.2 GO:0003677 ... P66937 29538767
    466192 6fqm:D (3.06) BS04 E32 5.6.2.2 GO:0003677 ... P66937 29538767
    466193 6fqm:a (3.06) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466194 6fqm:a (3.06) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466195 6fqm:b (3.06) BS01 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466196 6fqm:b (3.06) BS02 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466197 6fqm:b (3.06) BS03 MN 5.6.2.2 GO:0003677 ... P66937 29538767
    466198 6fqm:c (3.06) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466199 6fqm:c (3.06) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466200 6fqm:c (3.06) BS03 E32 5.6.2.2 GO:0003677 ... Q99XG5 29538767

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).