SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    466201 6fqm:d (3.06) BS01 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466202 6fqm:d (3.06) BS02 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466203 6fqm:d (3.06) BS03 MN 5.6.2.2 GO:0003677 ... P66937 29538767
    466204 6fqn:A (2.30003) BS01 E2W 3.1.1.7 GO:0001507 ... P04058 30125110
    466205 6fqo:A (1.35) BS01 E2T 2.3.1.-
    2.3.1.48
    N/A Q92793 30258543 MOAD: ic50=0.14uM
    BindingDB: IC50=140nM
    466206 6fqo:B (1.35) BS01 E2T 2.3.1.-
    2.3.1.48
    N/A Q92793 30258543 MOAD: ic50=0.14uM
    BindingDB: IC50=140nM
    466207 6fqp:A (2.42) BS01 dna ? GO:0003677 ... Q15583 30060237
    466208 6fqp:A (2.42) BS02 dna ? GO:0003677 ... Q15583 30060237
    466209 6fqp:B (2.42) BS01 dna ? GO:0003677 ... Q15583 30060237
    466210 6fqp:B (2.42) BS02 dna ? GO:0003677 ... Q15583 30060237
    466211 6fqq:A (3.25) BS01 dna ? GO:0003677 ... Q15583 30060237
    466212 6fqq:A (3.25) BS02 dna ? GO:0003677 ... Q15583 30060237
    466213 6fqq:B (3.25) BS01 dna ? GO:0003677 ... Q15583 30060237
    466214 6fqq:B (3.25) BS02 dna ? GO:0003677 ... Q15583 30060237
    466215 6fqq:D (3.25) BS01 dna ? GO:0003677 ... Q15583 30060237
    466216 6fqq:D (3.25) BS02 dna ? GO:0003677 ... Q15583 30060237
    466217 6fqq:E (3.25) BS01 dna ? GO:0003677 ... Q15583 30060237
    466218 6fqq:E (3.25) BS02 dna ? GO:0003677 ... Q15583 30060237
    466219 6fqr:A (2.1) BS01 rna ? GO:0003676 ... O00425 30135093
    466220 6fqs:A (3.11) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466221 6fqs:A (3.11) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466222 6fqs:B (3.11) BS01 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466223 6fqs:B (3.11) BS02 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466224 6fqs:B (3.11) BS03 MN 5.6.2.2 GO:0003677 ... P66937 29538767
    466225 6fqs:C (3.11) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466226 6fqs:C (3.11) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466227 6fqs:D (3.11) BS01 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466228 6fqs:D (3.11) BS02 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466229 6fqs:D (3.11) BS03 MN 5.6.2.2 GO:0003677 ... P66937 29538767
    466230 6fqt:A (1.8) BS01 AY2 2.3.1.-
    2.3.1.48
    N/A Q92793 N/A
    466231 6fqt:A (1.8) BS02 AY2 2.3.1.-
    2.3.1.48
    N/A Q92793 N/A
    466232 6fqu:A (1.43) BS01 E3B 2.3.1.-
    2.3.1.48
    N/A Q92793 30258543 MOAD: ic50=2.2uM
    BindingDB: IC50=2200nM
    466233 6fqv:A (2.6) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466234 6fqv:A (2.6) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466235 6fqv:B (2.6) BS01 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466236 6fqv:B (2.6) BS02 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466237 6fqv:C (2.6) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466238 6fqv:C (2.6) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466239 6fqv:D (2.6) BS01 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466240 6fqv:D (2.6) BS02 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466241 6fqv:R (2.6) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466242 6fqv:R (2.6) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466243 6fqv:S (2.6) BS01 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466244 6fqv:S (2.6) BS02 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466245 6fqv:T (2.6) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466246 6fqv:T (2.6) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 29538767
    466247 6fqv:U (2.6) BS01 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466248 6fqv:U (2.6) BS02 dna 5.6.2.2 GO:0003677 ... P66937 29538767
    466249 6fqy:A (2.9) BS01 NAP 1.1.1.44 GO:0000166 ... Q8IKT2 30098336
    466250 6fqy:B (2.9) BS01 NAP 1.1.1.44 GO:0000166 ... Q8IKT2 30098336
    466251 6fqz:A (1.9) BS01 6PG 1.1.1.44 GO:0000166 ... Q8IKT2 30098336
    466252 6fqz:A (1.9) BS02 6PG 1.1.1.44 GO:0000166 ... Q8IKT2 30098336
    466253 6fqz:B (1.9) BS01 6PG 1.1.1.44 GO:0000166 ... Q8IKT2 30098336
    466254 6fqz:B (1.9) BS02 6PG 1.1.1.44 GO:0000166 ... Q8IKT2 30098336
    466255 6fr0:A (1.5) BS01 E3H 2.3.1.-
    2.3.1.48
    N/A Q92793 30258543 MOAD: ic50=0.146uM
    BindingDB: IC50=146nM
    466256 6fr0:B (1.5) BS01 E3H 2.3.1.-
    2.3.1.48
    N/A Q92793 30258543 MOAD: ic50=0.146uM
    BindingDB: IC50=146nM
    466257 6fr1:A (1.561) BS01 E3K 2.7.11.24 GO:0000165 ... P63086 N/A
    466258 6fr2:A (2.262) BS01 E3N 3.1.3.76
    3.3.2.10
    GO:0003824 ... P34913 30059891 MOAD: ic50=4.99nM
    466259 6fr2:A (2.262) BS02 MG 3.1.3.76
    3.3.2.10
    GO:0003824 ... P34913 30059891
    466260 6frd:A (2.2) BS01 ZN 3.1.4.- GO:0004114 ... Q8WQX9 N/A
    466261 6frd:B (2.2) BS01 ZN 3.1.4.- GO:0004114 ... Q8WQX9 N/A
    466262 6frd:B (2.2) BS02 E3Q 3.1.4.- GO:0004114 ... Q8WQX9 N/A
    466263 6frf:A (2.1) BS01 E3T 2.3.1.-
    2.3.1.48
    N/A Q92793 30258543 MOAD: ic50=0.04uM
    BindingDB: IC50=40nM
    466264 6frf:B (2.1) BS01 E3T 2.3.1.-
    2.3.1.48
    N/A Q92793 30258543 MOAD: ic50=0.04uM
    BindingDB: IC50=40nM
    466265 6frf:C (2.1) BS01 E3T 2.3.1.-
    2.3.1.48
    N/A Q92793 30258543 MOAD: ic50=0.04uM
    BindingDB: IC50=40nM
    466266 6frf:D (2.1) BS01 E3T 2.3.1.-
    2.3.1.48
    N/A Q92793 30258543 MOAD: ic50=0.04uM
    BindingDB: IC50=40nM
    466267 6frj:H (1.4) BS01 peptide N/A N/A N/A 30726084
    466268 6frk:3 (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466269 6frk:4 (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466270 6frk:4 (3.7) BS02 rna N/A GO:0003735 ... N/A 29567807
    466271 6frk:6 (3.7) BS01 rna N/A N/A N/A 29567807
    466272 6frk:A (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466273 6frk:B (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466274 6frk:C (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466275 6frk:C (3.7) BS02 rna N/A GO:0003735 ... N/A 29567807
    466276 6frk:D (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466277 6frk:D (3.7) BS02 rna N/A GO:0003735 ... N/A 29567807
    466278 6frk:E (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466279 6frk:F (3.7) BS01 rna N/A GO:0000463 ... N/A 29567807
    466280 6frk:F (3.7) BS02 rna N/A GO:0000463 ... N/A 29567807
    466281 6frk:G (3.7) BS01 rna N/A GO:0003723 ... N/A 29567807
    466282 6frk:G (3.7) BS02 rna N/A GO:0003723 ... N/A 29567807
    466283 6frk:H (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466284 6frk:I (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466285 6frk:I (3.7) BS02 rna N/A GO:0003735 ... N/A 29567807
    466286 6frk:I (3.7) BS03 rna N/A GO:0003735 ... N/A 29567807
    466287 6frk:J (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466288 6frk:J (3.7) BS02 rna N/A GO:0003735 ... N/A 29567807
    466289 6frk:J (3.7) BS03 rna N/A GO:0003735 ... N/A 29567807
    466290 6frk:L (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466291 6frk:L (3.7) BS02 rna N/A GO:0003735 ... N/A 29567807
    466292 6frk:M (3.7) BS01 rna N/A GO:0003723 ... N/A 29567807
    466293 6frk:N (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466294 6frk:N (3.7) BS02 rna N/A GO:0003735 ... N/A 29567807
    466295 6frk:O (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466296 6frk:P (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466297 6frk:P (3.7) BS02 rna N/A GO:0003735 ... N/A 29567807
    466298 6frk:Q (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466299 6frk:R (3.7) BS01 rna N/A GO:0003723 ... N/A 29567807
    466300 6frk:S (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466301 6frk:S (3.7) BS02 rna N/A GO:0003735 ... N/A 29567807
    466302 6frk:T (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466303 6frk:T (3.7) BS02 rna N/A GO:0003735 ... N/A 29567807
    466304 6frk:U (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466305 6frk:V (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466306 6frk:W (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466307 6frk:X (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466308 6frk:X (3.7) BS02 rna N/A GO:0003735 ... N/A 29567807
    466309 6frk:Y (3.7) BS01 rna N/A GO:0003723 ... N/A 29567807
    466310 6frk:Y (3.7) BS02 rna N/A GO:0003723 ... N/A 29567807
    466311 6frk:Z (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466312 6frk:a (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466313 6frk:b (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466314 6frk:c (3.7) BS01 rna N/A GO:0003723 ... N/A 29567807
    466315 6frk:d (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466316 6frk:e (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466317 6frk:f (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466318 6frk:g (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466319 6frk:h (3.7) BS01 rna N/A GO:0000463 ... N/A 29567807
    466320 6frk:h (3.7) BS02 rna N/A GO:0000463 ... N/A 29567807
    466321 6frk:i (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466322 6frk:j (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466323 6frk:j (3.7) BS02 rna N/A GO:0003735 ... N/A 29567807
    466324 6frk:j (3.7) BS03 ZN N/A GO:0003735 ... N/A 29567807
    466325 6frk:k (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466326 6frk:l (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466327 6frk:l (3.7) BS02 rna N/A GO:0003735 ... N/A 29567807
    466328 6frk:m (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466329 6frk:m (3.7) BS02 ZN N/A GO:0003735 ... N/A 29567807
    466330 6frk:o (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466331 6frk:o (3.7) BS02 rna N/A GO:0003735 ... N/A 29567807
    466332 6frk:p (3.7) BS01 rna N/A GO:0003735 ... N/A 29567807
    466333 6frk:q (3.7) BS01 rna ? GO:0006614 ... J9PAS6 29567807
    466334 6frk:r (3.7) BS01 rna ? GO:0006614 ... P33731 29567807
    466335 6frk:u (3.7) BS01 rna ? GO:0003723 ... Q00004 29567807
    466336 6frk:v (3.7) BS01 MG ? GO:0005525 ... G1STG2 29567807
    466337 6frk:v (3.7) BS02 GTP ? GO:0005525 ... G1STG2 29567807
    466338 6frk:w (3.7) BS01 rna ? GO:0006614 ... P21262 29567807
    466339 6frk:x (3.7) BS01 rna 3.6.5.4 GO:0003723 ... P61010 29567807
    466340 6frk:x (3.7) BS02 peptide 3.6.5.4 GO:0003723 ... P61010 29567807
    466341 6frk:x (3.7) BS03 GNP 3.6.5.4 GO:0003723 ... P61010 29567807
    466342 6frk:x (3.7) BS04 MG 3.6.5.4 GO:0003723 ... P61010 29567807
    466343 6frk:y (3.7) BS01 rna ? GO:0003924 ... G1TCX6 29567807
    466344 6frk:y (3.7) BS02 GNP ? GO:0003924 ... G1TCX6 29567807
    466345 6frk:y (3.7) BS03 GNP ? GO:0003924 ... G1TCX6 29567807
    466346 6frk:z (3.7) BS01 rna ? GO:0003723 ... P16255 29567807
    466347 6frm:A (2.2) BS01 FMN ? GO:0000166 ... A0A452CSW8 29806881
    466348 6frm:A (2.2) BS02 TB ? GO:0000166 ... A0A452CSW8 29806881
    466349 6frm:B (2.2) BS01 FMN ? GO:0000166 ... A0A452CSW8 29806881
    466350 6frm:B (2.2) BS02 TB ? GO:0000166 ... A0A452CSW8 29806881
    466351 6frm:C (2.2) BS01 FMN ? GO:0000166 ... A0A452CSW8 29806881
    466352 6frm:C (2.2) BS02 FMN ? GO:0000166 ... A0A452CSW8 29806881
    466353 6frm:C (2.2) BS03 TB ? GO:0000166 ... A0A452CSW8 29806881
    466354 6frm:C (2.2) BS04 FE ? GO:0000166 ... A0A452CSW8 29806881
    466355 6frm:C (2.2) BS05 7MT ? GO:0000166 ... A0A452CSW8 29806881
    466356 6frm:D (2.2) BS01 FMN ? GO:0000166 ... A0A452CSW8 29806881
    466357 6frm:D (2.2) BS02 TB ? GO:0000166 ... A0A452CSW8 29806881
    466358 6frm:D (2.2) BS03 FE ? GO:0000166 ... A0A452CSW8 29806881
    466359 6frm:E (2.2) BS01 FMN ? GO:0000166 ... A0A452CSW8 29806881
    466360 6frm:E (2.2) BS02 TB ? GO:0000166 ... A0A452CSW8 29806881
    466361 6frm:F (2.2) BS01 FMN ? GO:0000166 ... A0A452CSW8 29806881
    466362 6frm:F (2.2) BS02 TB ? GO:0000166 ... A0A452CSW8 29806881
    466363 6frm:G (2.2) BS01 FMN ? GO:0000166 ... A0A452CSW8 29806881
    466364 6frm:G (2.2) BS02 FMN ? GO:0000166 ... A0A452CSW8 29806881
    466365 6frm:G (2.2) BS03 TB ? GO:0000166 ... A0A452CSW8 29806881
    466366 6frm:G (2.2) BS04 FE ? GO:0000166 ... A0A452CSW8 29806881
    466367 6frm:H (2.2) BS01 FMN ? GO:0000166 ... A0A452CSW8 29806881
    466368 6frm:H (2.2) BS02 FMN ? GO:0000166 ... A0A452CSW8 29806881
    466369 6frm:H (2.2) BS03 TB ? GO:0000166 ... A0A452CSW8 29806881
    466370 6frm:H (2.2) BS04 FE ? GO:0000166 ... A0A452CSW8 29806881
    466371 6frn:A (1.74) BS01 FMN ? GO:0000166 ... A0A452CSW8 29806881
    466372 6frn:A (1.74) BS02 TB ? GO:0000166 ... A0A452CSW8 29806881
    466373 6frn:B (1.74) BS01 FMN ? GO:0000166 ... A0A452CSW8 29806881
    466374 6frn:B (1.74) BS02 TB ? GO:0000166 ... A0A452CSW8 29806881
    466375 6frn:C (1.74) BS01 FMN ? GO:0000166 ... A0A452CSW8 29806881
    466376 6frn:C (1.74) BS02 TB ? GO:0000166 ... A0A452CSW8 29806881
    466377 6frn:C (1.74) BS03 7MT ? GO:0000166 ... A0A452CSW8 29806881
    466378 6frn:D (1.74) BS01 FMN ? GO:0000166 ... A0A452CSW8 29806881
    466379 6frn:D (1.74) BS02 TB ? GO:0000166 ... A0A452CSW8 29806881
    466380 6frn:D (1.74) BS03 7MT ? GO:0000166 ... A0A452CSW8 29806881
    466381 6fro:A (1.42) BS01 7MT 3.2.1.17 GO:0003796 ... P00698 29806881
    466382 6frp:A (1.53) BS01 ZAS 2.7.11.24 GO:0000165 ... P63086 N/A
    466383 6frv:A (2.3) BS01 MAN 3.2.1.3 GO:0000272 ... P69328 29717717
    466384 6frv:A (2.3) BS02 MAN 3.2.1.3 GO:0000272 ... P69328 29717717
    466385 6frw:A (1.52) BS01 ZN 2.4.1.10 GO:0009758 ... B2VCC3 30660564
    466386 6frw:A (1.52) BS02 ZN 2.4.1.10 GO:0009758 ... B2VCC3 30660564
    466387 6frw:A (1.52) BS03 ZN 2.4.1.10 GO:0009758 ... B2VCC3 30660564
    466388 6frx:A (1.88) BS01 peptide 2.7.11.11 GO:0000287 ... P17612 N/A
    466389 6frx:A (1.88) BS02 E3Z 2.7.11.11 GO:0000287 ... P17612 N/A
    466390 6fry:A (1.7) BS01 9CO ? GO:0005576 ... P22629 N/A
    466391 6frz:A (1.65) BS01 ZN 3.1.8.1 GO:0004063 ... P0A434 N/A
    466392 6frz:A (1.65) BS02 ZN 3.1.8.1 GO:0004063 ... P0A434 N/A
    466393 6frz:A (1.65) BS03 E4T 3.1.8.1 GO:0004063 ... P0A434 N/A
    466394 6frz:B (1.65) BS01 ZN 3.1.8.1 GO:0004063 ... P0A434 N/A
    466395 6frz:B (1.65) BS02 ZN 3.1.8.1 GO:0004063 ... P0A434 N/A
    466396 6fs0:A (2.25) BS01 E4W ? GO:0042981 ... Q07820 30559424 MOAD: Kd=0.00017uM
    BindingDB: IC50=<3.00nM, Ki=0.200000nM
    466397 6fs1:A (1.6) BS01 E4Q ? GO:0042981 ... Q07820 30559424 MOAD: Kd=0.098uM
    BindingDB: Ki=42nM, IC50=42nM, Kd=94nM
    466398 6fs1:B (1.6) BS01 E4Q ? GO:0042981 ... Q07820 30559424 MOAD: Kd=0.098uM
    BindingDB: Ki=42nM, IC50=42nM, Kd=94nM
    466399 6fs2:A (2.55) BS01 E4K ? GO:0042981 ... Q07820 30559424
    466400 6fs2:A (2.55) BS02 E4K ? GO:0042981 ... Q07820 30559424

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).