SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    466401 6fs2:B (2.55) BS01 E4K ? GO:0042981 ... Q07820 30559424
    466402 6fs2:B (2.55) BS02 E4K ? GO:0042981 ... Q07820 30559424
    466403 6fs3:A (1.75) BS01 ZN 3.1.8.1 GO:0004063 ... P0A434 N/A
    466404 6fs3:A (1.75) BS02 ZN 3.1.8.1 GO:0004063 ... P0A434 N/A
    466405 6fs3:A (1.75) BS03 9ON 3.1.8.1 GO:0004063 ... P0A434 N/A
    466406 6fs3:B (1.75) BS01 ZN 3.1.8.1 GO:0004063 ... P0A434 N/A
    466407 6fs3:B (1.75) BS02 ZN 3.1.8.1 GO:0004063 ... P0A434 N/A
    466408 6fs3:B (1.75) BS03 9ON 3.1.8.1 GO:0004063 ... P0A434 N/A
    466409 6fs6:A (2.291) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466410 6fs6:A (2.291) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466411 6fs6:A (2.291) BS03 E4Z 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466412 6fs6:B (2.291) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466413 6fs6:B (2.291) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466414 6fs6:B (2.291) BS03 E4Z 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466415 6fs6:C (2.291) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466416 6fs6:C (2.291) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466417 6fs6:C (2.291) BS03 E4Z 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466418 6fs6:D (2.291) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466419 6fs6:D (2.291) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466420 6fs6:D (2.291) BS03 E4Z 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466421 6fs6:E (2.291) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466422 6fs6:E (2.291) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466423 6fs6:E (2.291) BS03 E4Z 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466424 6fs6:F (2.291) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466425 6fs6:F (2.291) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466426 6fs6:F (2.291) BS03 E4Z 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466427 6fs7:A (1.96) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466428 6fs7:A (1.96) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466429 6fs7:A (1.96) BS03 E4Z 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466430 6fs7:B (1.96) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466431 6fs7:B (1.96) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466432 6fs7:B (1.96) BS03 E4Z 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466433 6fs7:C (1.96) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466434 6fs7:C (1.96) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466435 6fs7:C (1.96) BS03 E4Z 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466436 6fs7:D (1.96) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466437 6fs7:D (1.96) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466438 6fs7:D (1.96) BS03 E4Z 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466439 6fs7:E (1.96) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466440 6fs7:E (1.96) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466441 6fs7:E (1.96) BS03 E4Z 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466442 6fs7:F (1.96) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466443 6fs7:F (1.96) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466444 6fs7:F (1.96) BS03 E4Z 3.1.-.- GO:0003723 ... C3W5S0 29941893
    466445 6fs8:A (1.8) BS01 E4Z 3.1.-.- GO:0003723 ... Q5V8Z9 29941893
    466446 6fs8:A (1.8) BS02 MN 3.1.-.- GO:0003723 ... Q5V8Z9 29941893
    466447 6fs8:A (1.8) BS03 MN 3.1.-.- GO:0003723 ... Q5V8Z9 29941893
    466448 6fs8:B (1.8) BS01 E4Z 3.1.-.- GO:0003723 ... Q5V8Z9 29941893
    466449 6fs8:B (1.8) BS02 MN 3.1.-.- GO:0003723 ... Q5V8Z9 29941893
    466450 6fs8:B (1.8) BS03 MN 3.1.-.- GO:0003723 ... Q5V8Z9 29941893
    466451 6fs9:A (2.28) BS01 MN 3.1.-.- GO:0003723 ... Q5V8Z9 29941893
    466452 6fs9:A (2.28) BS02 MN 3.1.-.- GO:0003723 ... Q5V8Z9 29941893
    466453 6fs9:A (2.28) BS03 E4Z 3.1.-.- GO:0003723 ... Q5V8Z9 29941893
    466454 6fsa:A (2.33) BS01 MG ? GO:0000146 ... Q9BE39 30275503
    466455 6fsa:A (2.33) BS02 ADP ? GO:0000146 ... Q9BE39 30275503
    466456 6fsa:B (2.33) BS01 MG ? GO:0000146 ... Q9BE39 30275503
    466457 6fsa:B (2.33) BS02 ADP ? GO:0000146 ... Q9BE39 30275503
    466458 6fsb:A (1.8) BS01 MN 3.1.-.- GO:0003723 ... Q5V8Z9 29941893
    466459 6fsb:A (1.8) BS02 MN 3.1.-.- GO:0003723 ... Q5V8Z9 29941893
    466460 6fsb:B (1.8) BS01 MG 3.1.-.- GO:0003723 ... Q5V8Z9 29941893
    466461 6fsd:A (2.7) BS01 E5H 3.1.1.7 GO:0001919 ... P21836 30339371
    466462 6fsd:B (2.7) BS01 E5H 3.1.1.7 GO:0001919 ... P21836 30339371
    466463 6fse:A (2.7) BS01 E5K 3.1.1.7 GO:0001919 ... P21836 30339371
    466464 6fse:B (2.7) BS01 E5K 3.1.1.7 GO:0001919 ... P21836 30339371
    466465 6fsg:A (1.27) BS01 FMN ? GO:0000166 ... Q81G35 29722453
    466466 6fsh:A (2.5) BS01 HEM ? GO:0004497 ... Q70AY8 29751197
    466467 6fsh:B (2.5) BS01 HEM ? GO:0004497 ... Q70AY8 29751197
    466468 6fsh:C (2.5) BS01 HEM ? GO:0004497 ... Q70AY8 29751197
    466469 6fsh:D (2.5) BS01 HEM ? GO:0004497 ... Q70AY8 29751197
    466470 6fsi:A (1.32) BS01 FMN ? GO:0000166 ... Q81G35 29722453
    466471 6fsi:A (1.32) BS02 GLC ? GO:0000166 ... Q81G35 29722453
    466472 6fsk:A (1.56) BS01 HEM ? GO:0004601 ... A0A067N4E7 N/A
    466473 6fsk:B (1.56) BS01 HEM ? GO:0004601 ... A0A067N4E7 N/A
    466474 6fsl:A (2.5) BS01 HEM ? GO:0004601 ... A0A067N4E7 N/A
    466475 6fsl:B (2.5) BS01 HEM ? GO:0004601 ... A0A067N4E7 N/A
    466476 6fsm:A (1.39) BS01 ZN 3.4.24.27 GO:0004222 ... P43133 29717999
    466477 6fsm:A (1.39) BS02 CA 3.4.24.27 GO:0004222 ... P43133 29717999
    466478 6fsm:A (1.39) BS03 CA 3.4.24.27 GO:0004222 ... P43133 29717999
    466479 6fsm:A (1.39) BS04 CA 3.4.24.27 GO:0004222 ... P43133 29717999
    466480 6fsm:A (1.39) BS05 CA 3.4.24.27 GO:0004222 ... P43133 29717999
    466481 6fsm:A (1.39) BS06 VAL 3.4.24.27 GO:0004222 ... P43133 29717999
    466482 6fsm:A (1.39) BS07 LYS 3.4.24.27 GO:0004222 ... P43133 29717999
    466483 6fsn:A (1.19) BS01 CA ? GO:0003980 ... G0SB58 N/A
    466484 6fsn:A (1.19) BS02 UPG ? GO:0003980 ... G0SB58 N/A
    466485 6fso:A (1.449) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 31808981
    466486 6fso:A (1.449) BS02 F63 2.4.2.29 GO:0002099 ... P28720 31808981
    466487 6fsy:A (1.34) BS01 E5Q ? N/A O60885 29776834 BindingDB: IC50=166nM, Kd=247nM
    466488 6fsz:AA (4.6) BS01 rna ? GO:0000176 ... Q05636 29519915
    466489 6fsz:BB (4.6) BS01 rna ? GO:0000176 ... P46948 29519915
    466490 6fsz:GG (4.6) BS01 rna ? GO:0000176 ... Q08285 29519915
    466491 6fsz:HH (4.6) BS01 rna ? GO:0000176 ... P38792 29519915
    466492 6fsz:II (4.6) BS01 rna ? GO:0000176 ... P53859 29519915
    466493 6fsz:MM (4.6) BS01 rna 3.6.4.13 GO:0000292 ... P47047 29519915
    466494 6ft0:A (2.1) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    466495 6ft0:A (2.1) BS02 E6E 3.1.4.53 GO:0004114 ... Q08499 N/A
    466496 6ft0:B (2.1) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    466497 6ft0:B (2.1) BS02 E6E 3.1.4.53 GO:0004114 ... Q08499 N/A
    466498 6ft0:C (2.1) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    466499 6ft0:C (2.1) BS02 E6E 3.1.4.53 GO:0004114 ... Q08499 N/A
    466500 6ft0:D (2.1) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    466501 6ft0:D (2.1) BS02 E6E 3.1.4.53 GO:0004114 ... Q08499 N/A
    466502 6ft1:A (1.4) BS01 FMN ? GO:0000166 ... Q81G35 29722453
    466503 6ft1:A (1.4) BS02 GLC ? GO:0000166 ... Q81G35 29722453
    466504 6ft2:A (1.25) BS01 ARG ? GO:0006865 ... P02911 N/A
    466505 6ft3:A (1.28) BS01 E5T ? N/A O60885 29776834 BindingDB: IC50=377nM
    466506 6ft4:A (1.34) BS01 E5W ? N/A O60885 29776834 BindingDB: IC50=235nM
    466507 6ft6:4 (3.9) BS01 rna 3.-.-.- GO:0000055 ... Q03862 29519915
    466508 6ft6:4 (3.9) BS02 rna 3.-.-.- GO:0000055 ... Q03862 29519915
    466509 6ft6:5 (3.9) BS01 rna ? GO:0003674 ... P53188 29519915
    466510 6ft6:5 (3.9) BS02 rna ? GO:0003674 ... P53188 29519915
    466511 6ft6:A (3.9) BS01 rna ? GO:0002181 ... P0CX45 29519915
    466512 6ft6:B (3.9) BS01 rna ? GO:0000027 ... P14126 29519915
    466513 6ft6:C (3.9) BS01 rna ? GO:0002181 ... P10664 29519915
    466514 6ft6:C (3.9) BS02 rna ? GO:0002181 ... P10664 29519915
    466515 6ft6:D (3.9) BS01 rna ? GO:0000027 ... P26321 29519915
    466516 6ft6:D (3.9) BS02 rna ? GO:0000027 ... P26321 29519915
    466517 6ft6:E (3.9) BS01 rna ? GO:0000027 ... Q02326 29519915
    466518 6ft6:F (3.9) BS01 rna ? GO:0000463 ... P05737 29519915
    466519 6ft6:G (3.9) BS01 rna ? GO:0000470 ... P17076 29519915
    466520 6ft6:G (3.9) BS02 rna ? GO:0000470 ... P17076 29519915
    466521 6ft6:H (3.9) BS01 rna ? GO:0002181 ... P05738 29519915
    466522 6ft6:I (3.9) BS01 rna ? GO:0000055 ... Q08004 29519915
    466523 6ft6:I (3.9) BS02 ZN ? GO:0000055 ... Q08004 29519915
    466524 6ft6:J (3.9) BS01 rna ? GO:0000027 ... P0C0W9 29519915
    466525 6ft6:J (3.9) BS02 rna ? GO:0000027 ... P0C0W9 29519915
    466526 6ft6:L (3.9) BS01 rna ? GO:0002181 ... Q12690 29519915
    466527 6ft6:L (3.9) BS02 rna ? GO:0002181 ... Q12690 29519915
    466528 6ft6:M (3.9) BS01 rna ? GO:0000027 ... P36105 29519915
    466529 6ft6:MM (3.9) BS01 rna 3.6.4.13 GO:0000292 ... P47047 29519915
    466530 6ft6:MM (3.9) BS02 rna 3.6.4.13 GO:0000292 ... P47047 29519915
    466531 6ft6:N (3.9) BS01 rna ? GO:0002181 ... P05748 29519915
    466532 6ft6:N (3.9) BS02 rna ? GO:0002181 ... P05748 29519915
    466533 6ft6:O (3.9) BS01 rna ? GO:0000470 ... P26784 29519915
    466534 6ft6:P (3.9) BS01 rna ? GO:0000448 ... P05740 29519915
    466535 6ft6:P (3.9) BS02 rna ? GO:0000448 ... P05740 29519915
    466536 6ft6:Q (3.9) BS01 rna ? GO:0002181 ... P0CX49 29519915
    466537 6ft6:R (3.9) BS01 rna ? GO:0002181 ... P0CX82 29519915
    466538 6ft6:S (3.9) BS01 rna ? GO:0002181 ... P0CX23 29519915
    466539 6ft6:T (3.9) BS01 rna ? GO:0002181 ... Q02753 29519915
    466540 6ft6:U (3.9) BS01 rna ? GO:0002181 ... P05749 29519915
    466541 6ft6:V (3.9) BS01 rna ? GO:0002181 ... P0CX41 29519915
    466542 6ft6:W (3.9) BS01 rna ? GO:0000027 ... P33201 29519915
    466543 6ft6:X (3.9) BS01 rna ? GO:0000027 ... P04456 29519915
    466544 6ft6:X (3.9) BS02 rna ? GO:0000027 ... P04456 29519915
    466545 6ft6:Y (3.9) BS01 rna ? GO:0002181 ... P05743 29519915
    466546 6ft6:Y (3.9) BS02 rna ? GO:0002181 ... P05743 29519915
    466547 6ft6:Z (3.9) BS01 rna ? GO:0002181 ... P0C2H6 29519915
    466548 6ft6:a (3.9) BS01 rna ? GO:0002181 ... P02406 29519915
    466549 6ft6:b (3.9) BS01 rna ? GO:0000054 ... Q02892 29519915
    466550 6ft6:b (3.9) BS02 GTP ? GO:0000054 ... Q02892 29519915
    466551 6ft6:b (3.9) BS03 MG ? GO:0000054 ... Q02892 29519915
    466552 6ft6:c (3.9) BS01 rna ? GO:0002181 ... P14120 29519915
    466553 6ft6:d (3.9) BS01 rna ? GO:0002181 ... P0C2H8 29519915
    466554 6ft6:e (3.9) BS01 rna ? GO:0002181 ... P38061 29519915
    466555 6ft6:f (3.9) BS01 rna ? GO:0000027 ... P05744 29519915
    466556 6ft6:g (3.9) BS01 rna ? GO:0002181 ... P87262 29519915
    466557 6ft6:h (3.9) BS01 rna ? GO:0000463 ... P0CX84 29519915
    466558 6ft6:h (3.9) BS02 rna ? GO:0000463 ... P0CX84 29519915
    466559 6ft6:i (3.9) BS01 rna ? GO:0002181 ... P05745 29519915
    466560 6ft6:j (3.9) BS01 rna ? GO:0000448 ... P49166 29519915
    466561 6ft6:j (3.9) BS02 rna ? GO:0000448 ... P49166 29519915
    466562 6ft6:j (3.9) BS03 ZN ? GO:0000448 ... P49166 29519915
    466563 6ft6:k (3.9) BS01 rna ? GO:0002181 ... P49167 29519915
    466564 6ft6:l (3.9) BS01 rna ? GO:0002181 ... P04650 29519915
    466565 6ft6:l (3.9) BS02 rna ? GO:0002181 ... P04650 29519915
    466566 6ft6:m (3.9) BS01 rna ? GO:0000055 ... P53742 29519915
    466567 6ft6:m (3.9) BS02 GTP ? GO:0000055 ... P53742 29519915
    466568 6ft6:n (3.9) BS01 rna ? GO:0000462 ... P53261 29519915
    466569 6ft6:n (3.9) BS02 rna ? GO:0000462 ... P53261 29519915
    466570 6ft6:p (3.9) BS01 rna ? GO:0002181 ... P0CX25 29519915
    466571 6ft6:p (3.9) BS02 ZN ? GO:0002181 ... P0CX25 29519915
    466572 6ft6:r (3.9) BS01 rna ? GO:0000460 ... P40078 29519915
    466573 6ft6:s (3.9) BS01 rna ? GO:0000055 ... P40010 29519915
    466574 6ft6:u (3.9) BS01 rna ? GO:0001671 ... Q07915 29519915
    466575 6ft6:u (3.9) BS02 ZN ? GO:0001671 ... Q07915 29519915
    466576 6ft6:v (3.9) BS01 rna ? GO:0000027 ... P36160 29519915
    466577 6ft6:v (3.9) BS02 rna ? GO:0000027 ... P36160 29519915
    466578 6ft6:w (3.9) BS01 rna ? GO:0000055 ... Q08746 29519915
    466579 6ft6:y (3.9) BS01 rna ? GO:0000054 ... Q12522 29519915
    466580 6ft6:z (3.9) BS01 rna ? GO:0003674 ... P38202 29519915
    466581 6ft7:A (2.02) BS01 E6Q 2.7.12.1 GO:0004672 ... P49761 29723265
    466582 6ft7:B (2.02) BS01 E6Q 2.7.12.1 GO:0004672 ... P49761 29723265
    466583 6ft8:A (1.45) BS01 E6T 2.7.12.1 GO:0004672 ... P49759 29723265
    466584 6ft9:A (1.87) BS01 E6W 2.7.12.1 GO:0004672 ... P49759 29723265
    466585 6ft9:B (1.87) BS01 E6W 2.7.12.1 GO:0004672 ... P49759 29723265
    466586 6ft9:C (1.87) BS01 E6W 2.7.12.1 GO:0004672 ... P49759 29723265
    466587 6fta:A (2.34) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    466588 6fta:A (2.34) BS02 E6N 3.1.4.53 GO:0004114 ... Q08499 N/A
    466589 6fta:B (2.34) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    466590 6fta:B (2.34) BS02 E6N 3.1.4.53 GO:0004114 ... Q08499 N/A
    466591 6fta:C (2.34) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    466592 6fta:C (2.34) BS02 E6N 3.1.4.53 GO:0004114 ... Q08499 N/A
    466593 6fta:D (2.34) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    466594 6fta:D (2.34) BS02 E6N 3.1.4.53 GO:0004114 ... Q08499 N/A
    466595 6ftb:A (2.1) BS01 M0E 2.4.99.28 N/A Q7A0I6 30046666
    466596 6ftb:A (2.1) BS02 M0E 2.4.99.28 N/A Q7A0I6 30046666
    466597 6ftb:A (2.1) BS03 M0E 2.4.99.28 N/A Q7A0I6 30046666
    466598 6ftb:A (2.1) BS04 1QW 2.4.99.28 N/A Q7A0I6 30046666
    466599 6ftc:A (1.8) BS01 FAD N/A GO:0004791 ... N/A 29800515
    466600 6ftd:A (1.4) BS01 LBV 2.7.13.3 GO:0006355 ... Q9RZA4 29938729

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).