SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    467601 6fyy:V (3.02) BS01 rna ? GO:0003735 ... Q6CXT6 30475211
    467602 6fyy:W (3.02) BS01 rna ? GO:0003735 ... Q6CW21 30475211
    467603 6fyy:X (3.02) BS01 rna ? GO:0003735 ... F2Z602 30475211
    467604 6fyy:Y (3.02) BS01 rna ? GO:0003735 ... Q6CU44 30475211
    467605 6fyy:Z (3.02) BS01 rna ? GO:0005840 ... Q6CW78 30475211
    467606 6fyy:a (3.02) BS01 rna ? GO:0003729 ... Q6CS01 30475211
    467607 6fyy:a (3.02) BS02 rna ? GO:0003729 ... Q6CS01 30475211
    467608 6fyy:a (3.02) BS03 ZN ? GO:0003729 ... Q6CS01 30475211
    467609 6fyy:b (3.02) BS01 rna ? GO:0003735 ... Q6CNL2 30475211
    467610 6fyy:b (3.02) BS02 ZN ? GO:0003735 ... Q6CNL2 30475211
    467611 6fyy:c (3.02) BS01 rna ? GO:0000028 ... P33285 30475211
    467612 6fyy:c (3.02) BS02 rna ? GO:0000028 ... P33285 30475211
    467613 6fyy:d (3.02) BS01 rna ? GO:0002181 ... Q6CPG3 30475211
    467614 6fyy:e (3.02) BS01 rna ? GO:0003735 ... Q6CUH5 30475211
    467615 6fyy:f (3.02) BS01 rna ? GO:0003735 ... P69061 30475211
    467616 6fyy:g (3.02) BS01 rna ? GO:0006417 ... Q6CNI7 30475211
    467617 6fyy:i (3.02) BS01 rna ? GO:0001677 ... P38912 30475211
    467618 6fyy:i (3.02) BS02 rna ? GO:0001677 ... P38912 30475211
    467619 6fyy:j (3.02) BS01 rna ? GO:0001731 ... P20459 30475211
    467620 6fyy:j (3.02) BS02 rna ? GO:0001731 ... P20459 30475211
    467621 6fyy:k (3.02) BS01 rna 3.6.5.3 GO:0000049 ... P32481 30475211
    467622 6fyy:k (3.02) BS02 MET 3.6.5.3 GO:0000049 ... P32481 30475211
    467623 6fyy:l (3.02) BS01 rna ? GO:0001731 ... P09064 30475211
    467624 6fyy:l (3.02) BS02 ZN ? GO:0001731 ... P09064 30475211
    467625 6fyy:m (3.02) BS01 rna ? GO:0001732 ... P38431 30475211
    467626 6fyy:m (3.02) BS02 rna ? GO:0001732 ... P38431 30475211
    467627 6fyy:o (3.02) BS01 rna ? GO:0000131 ... P38249 30475211
    467628 6fyy:o (3.02) BS02 rna ? GO:0000131 ... P38249 30475211
    467629 6fyy:p (3.02) BS01 rna ? GO:0001732 ... P06103 30475211
    467630 6fyy:q (3.02) BS01 rna ? GO:0003723 ... P32497 30475211
    467631 6fyz:A (2.15) BS01 EBE 3.5.1.98 N/A P56524 30463802 MOAD: Kd=0.039uM
    BindingDB: IC50=36nM, Kd=80nM
    467632 6fyz:A (2.15) BS02 ZN 3.5.1.98 N/A P56524 30463802
    467633 6fyz:A (2.15) BS03 ZN 3.5.1.98 N/A P56524 30463802
    467634 6fyz:B (2.15) BS01 EBE 3.5.1.98 N/A P56524 30463802 MOAD: Kd=0.039uM
    BindingDB: IC50=36nM, Kd=80nM
    467635 6fyz:B (2.15) BS02 ZN 3.5.1.98 N/A P56524 30463802
    467636 6fyz:B (2.15) BS03 ZN 3.5.1.98 N/A P56524 30463802
    467637 6fyz:C (2.15) BS01 EBE 3.5.1.98 N/A P56524 30463802 MOAD: Kd=0.039uM
    BindingDB: IC50=36nM, Kd=80nM
    467638 6fyz:C (2.15) BS02 ZN 3.5.1.98 N/A P56524 30463802
    467639 6fyz:C (2.15) BS03 ZN 3.5.1.98 N/A P56524 30463802
    467640 6fz1:A (2.2) BS01 CA 3.1.1.3 GO:0004806 ... Q93A71 30217852
    467641 6fz1:A (2.2) BS02 ZN 3.1.1.3 GO:0004806 ... Q93A71 30217852
    467642 6fz2:A (2.05) BS01 31A 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787
    467643 6fz2:A (2.05) BS02 MYA 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787
    467644 6fz2:A (2.05) BS03 MG 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787
    467645 6fz2:B (2.05) BS01 31A 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787
    467646 6fz2:B (2.05) BS02 MYA 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787
    467647 6fz2:B (2.05) BS03 MG 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787
    467648 6fz3:A (2.0) BS01 EBK 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787 BindingDB: IC50=25nM, Ki=0.900000nM
    467649 6fz3:A (2.0) BS02 MYA 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787
    467650 6fz3:A (2.0) BS03 MG 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787
    467651 6fz3:B (2.0) BS01 EBK 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787 BindingDB: IC50=25nM, Ki=0.900000nM
    467652 6fz3:B (2.0) BS02 MYA 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787
    467653 6fz3:B (2.0) BS03 MG 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787
    467654 6fz4:A (1.85) BS01 EC8 ? GO:0015276 ... P22756 30620174 MOAD: Ki=1.12uM
    467655 6fz5:A (1.89) BS01 BXN 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787 MOAD: Ki=430nM
    BindingDB: Ki=18nM
    467656 6fz5:A (1.89) BS02 MYA 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787
    467657 6fz5:A (1.89) BS03 MG 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787
    467658 6fz5:B (1.89) BS01 BXN 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787 MOAD: Ki=430nM
    BindingDB: Ki=18nM
    467659 6fz5:B (1.89) BS02 MYA 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787
    467660 6fz5:B (1.89) BS03 MG 2.3.1.-
    2.3.1.97
    GO:0004379 ... P30419 31423787
    467661 6fz6:A (1.42) BS01 SF4 2.1.1.192 GO:0000049 ... D1C4T7 N/A
    467662 6fz6:A (1.42) BS02 SAH 2.1.1.192 GO:0000049 ... D1C4T7 N/A
    467663 6fz6:B (1.42) BS01 SF4 2.1.1.192 GO:0000049 ... D1C4T7 N/A
    467664 6fz6:B (1.42) BS02 SAH 2.1.1.192 GO:0000049 ... D1C4T7 N/A
    467665 6fz7:A (1.736) BS01 ZN 3.1.1.3 GO:0004806 ... Q93A71 30217852
    467666 6fz7:A (1.736) BS02 CA 3.1.1.3 GO:0004806 ... Q93A71 30217852
    467667 6fz8:A (2.2) BS01 ZN 3.1.1.3 GO:0004806 ... Q93A71 30217852
    467668 6fz8:A (2.2) BS02 CA 3.1.1.3 GO:0004806 ... Q93A71 30217852
    467669 6fz9:A (1.2463) BS01 CA 3.1.1.3 GO:0004806 ... Q93A71 30217852
    467670 6fz9:A (1.2463) BS02 ZN 3.1.1.3 GO:0004806 ... Q93A71 30217852
    467671 6fza:A (1.75) BS01 ZN 3.1.1.3 GO:0004806 ... Q93A71 30217852
    467672 6fza:A (1.75) BS02 CA 3.1.1.3 GO:0004806 ... Q93A71 30217852
    467673 6fzb:A (2.05) BS01 SRY 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    467674 6fzb:A (2.05) BS02 MG 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    467675 6fzb:A (2.05) BS03 MG 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    467676 6fzb:A (2.05) BS04 ATP 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    467677 6fzb:B (2.05) BS01 SRY 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    467678 6fzb:B (2.05) BS02 MG 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    467679 6fzb:B (2.05) BS03 MG 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    467680 6fzb:B (2.05) BS04 ATP 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    467681 6fzc:A (2.7) BS01 ZN 3.1.1.3 GO:0004806 ... Q93A71 30217852
    467682 6fzc:A (2.7) BS02 CA 3.1.1.3 GO:0004806 ... Q93A71 30217852
    467683 6fzd:A (1.8) BS01 ZN 3.1.1.3 GO:0004806 ... Q93A71 30217852
    467684 6fzd:A (1.8) BS02 CA 3.1.1.3 GO:0004806 ... Q93A71 30217852
    467685 6fze:A (2.26) BS01 GSH ? N/A O50725 31785327
    467686 6fze:B (2.26) BS01 GSH ? N/A O50725 31785327
    467687 6fzf:A (1.95) BS01 peptide ? GO:0003677 ... P37231 30651555
    467688 6fzf:A (1.95) BS02 EDK ? GO:0003677 ... P37231 30651555 BindingDB: Ki=1.4nM, EC50=6.2nM
    467689 6fzf:B (1.95) BS01 peptide ? GO:0003677 ... P37231 30651555
    467690 6fzf:B (1.95) BS02 EDK ? GO:0003677 ... P37231 30651555 BindingDB: Ki=1.4nM, EC50=6.2nM
    467691 6fzg:A (2.1) BS01 EDK ? GO:0003677 ... P37231 30651555 BindingDB: Ki=1.4nM, EC50=6.2nM
    467692 6fzh:A (1.5) BS01 NAD 1.2.1.12 GO:0000166 ... P68777 30863383
    467693 6fzh:B (1.5) BS01 NAD 1.2.1.12 GO:0000166 ... P68777 30863383
    467694 6fzi:A (2.55) BS01 NAD 1.2.1.- GO:0000166 ... Q0STD4 30863383
    467695 6fzi:B (2.55) BS01 NAD 1.2.1.- GO:0000166 ... Q0STD4 30863383
    467696 6fzi:C (2.55) BS01 NAD 1.2.1.- GO:0000166 ... Q0STD4 30863383
    467697 6fzi:D (2.55) BS01 NAD 1.2.1.- GO:0000166 ... Q0STD4 30863383
    467698 6fzj:A (2.011) BS01 peptide ? GO:0003677 ... P37231 30651555
    467699 6fzj:A (2.011) BS02 EDK ? GO:0003677 ... P37231 30651555 BindingDB: Ki=1.4nM, EC50=6.2nM
    467700 6fzj:B (2.011) BS01 peptide ? GO:0003677 ... P37231 30651555
    467701 6fzj:B (2.011) BS02 EDK ? GO:0003677 ... P37231 30651555 BindingDB: Ki=1.4nM, EC50=6.2nM
    467702 6fzm:A (2.67) BS01 EE5 2.4.2.- GO:0003950 ... Q460N5 30344052
    467703 6fzm:B (2.67) BS01 EE5 2.4.2.- GO:0003950 ... Q460N5 30344052
    467704 6fzn:A (2.5) BS01 9UY N/A GO:0015979 ... N/A 30287387
    467705 6fzn:B (2.5) BS01 9UY N/A GO:0015979 ... N/A 30287387
    467706 6fzp:A (2.3) BS01 peptide ? GO:0003677 ... P37231 30651555
    467707 6fzp:A (2.3) BS02 EDK ? GO:0003677 ... P37231 30651555 BindingDB: Ki=1.4nM, EC50=6.2nM
    467708 6fzq:H (1.7) BS01 peptide N/A N/A N/A 30004703
    467709 6fzr:H (1.8) BS01 peptide N/A N/A N/A 30004703
    467710 6fzs:A (2.31) BS01 dna ? GO:0005667 ... Q99717 N/A
    467711 6fzs:A (2.31) BS02 dna ? GO:0005667 ... Q99717 N/A
    467712 6fzs:A (2.31) BS03 ZN ? GO:0005667 ... Q99717 N/A
    467713 6fzs:B (2.31) BS01 dna ? GO:0005667 ... Q99717 N/A
    467714 6fzs:B (2.31) BS02 dna ? GO:0005667 ... Q99717 N/A
    467715 6fzs:B (2.31) BS03 ZN ? GO:0005667 ... Q99717 N/A
    467716 6fzt:A (2.46) BS01 dna ? GO:0005667 ... O15198 N/A
    467717 6fzt:A (2.46) BS02 ZN ? GO:0005667 ... O15198 N/A
    467718 6fzt:B (2.46) BS01 dna ? GO:0005667 ... O15198 N/A
    467719 6fzt:B (2.46) BS02 dna ? GO:0005667 ... O15198 N/A
    467720 6fzt:B (2.46) BS03 ZN ? GO:0005667 ... O15198 N/A
    467721 6fzu:A (1.8) BS01 peptide ? GO:0003677 ... P51449 29990434
    467722 6fzu:A (1.8) BS02 EE8 ? GO:0003677 ... P51449 29990434 MOAD: ic50=216uM
    BindingDB: IC50=216000nM
    467723 6fzu:B (1.8) BS01 peptide ? GO:0003677 ... P51449 29990434
    467724 6fzu:B (1.8) BS02 EE8 ? GO:0003677 ... P51449 29990434 MOAD: ic50=216uM
    BindingDB: IC50=216000nM
    467725 6fzv:A (2.7) BS01 CA ? GO:0005201 ... P02461 30078642
    467726 6fzv:B (2.7) BS01 CA ? GO:0005201 ... P02461 30078642
    467727 6fzv:C (2.7) BS01 CA ? GO:0005201 ... P02461 30078642
    467728 6fzv:D (2.7) BS01 CA ? N/A Q15113 30078642
    467729 6fzv:D (2.7) BS02 CA ? N/A Q15113 30078642
    467730 6fzw:A (2.78) BS01 CA ? GO:0005201 ... P02461 30078642
    467731 6fzw:B (2.78) BS01 CA ? GO:0005201 ... P02461 30078642
    467732 6fzw:C (2.78) BS01 CA ? GO:0005201 ... P02461 30078642
    467733 6fzw:D (2.78) BS01 CA ? N/A Q15113 30078642
    467734 6fzw:D (2.78) BS02 CA ? N/A Q15113 30078642
    467735 6fzx:A (2.1) BS01 EEK 3.4.24.26 GO:0004222 ... P14756 30088919 MOAD: Ki=12.3uM
    467736 6fzx:A (2.1) BS02 ZN 3.4.24.26 GO:0004222 ... P14756 30088919
    467737 6fzx:A (2.1) BS03 CA 3.4.24.26 GO:0004222 ... P14756 30088919
    467738 6g01:A (1.61) BS01 CA 3.2.1.18 GO:0004308 ... C6KP13 30404922
    467739 6g01:A (1.61) BS02 CA 3.2.1.18 GO:0004308 ... C6KP13 30404922
    467740 6g01:A (1.61) BS03 EEW 3.2.1.18 GO:0004308 ... C6KP13 30404922
    467741 6g01:B (1.61) BS01 CA 3.2.1.18 GO:0004308 ... C6KP13 30404922
    467742 6g01:B (1.61) BS02 CA 3.2.1.18 GO:0004308 ... C6KP13 30404922
    467743 6g01:B (1.61) BS03 EEW 3.2.1.18 GO:0004308 ... C6KP13 30404922
    467744 6g02:A (1.84) BS01 CA 3.2.1.18 GO:0004308 ... C3W6G3 30404922
    467745 6g02:A (1.84) BS02 EF8 3.2.1.18 GO:0004308 ... C3W6G3 30404922
    467746 6g02:B (1.84) BS01 CA 3.2.1.18 GO:0004308 ... C3W6G3 30404922
    467747 6g02:B (1.84) BS02 CA 3.2.1.18 GO:0004308 ... C3W6G3 30404922
    467748 6g02:B (1.84) BS03 EF8 3.2.1.18 GO:0004308 ... C3W6G3 30404922
    467749 6g04:A (-1.00) BS01 peptide ? N/A Q06672 30201955
    467750 6g05:A (1.9) BS01 peptide ? GO:0003677 ... P51449 29990434
    467751 6g05:A (1.9) BS02 EF5 ? GO:0003677 ... P51449 29990434 BindingDB: IC50=10.0nM, EC50=251nM
    467752 6g05:B (1.9) BS01 peptide ? GO:0003677 ... P51449 29990434
    467753 6g05:B (1.9) BS02 EF5 ? GO:0003677 ... P51449 29990434 BindingDB: IC50=10.0nM, EC50=251nM
    467754 6g07:A (1.66) BS01 peptide ? GO:0003677 ... P51449 29990434
    467755 6g07:A (1.66) BS02 peptide ? GO:0003677 ... P51449 29990434
    467756 6g07:A (1.66) BS03 EEZ ? GO:0003677 ... P51449 29990434 MOAD: Kd=35.5nM
    BindingDB: IC50=255nM, Kd=36nM
    467757 6g07:B (1.66) BS01 peptide ? GO:0003677 ... P51449 29990434
    467758 6g07:B (1.66) BS02 EEZ ? GO:0003677 ... P51449 29990434 MOAD: Kd=35.5nM
    BindingDB: IC50=255nM, Kd=36nM
    467759 6g07:C (1.66) BS01 peptide ? GO:0003677 ... P51449 29990434
    467760 6g07:C (1.66) BS02 peptide ? GO:0003677 ... P51449 29990434
    467761 6g07:C (1.66) BS03 EEZ ? GO:0003677 ... P51449 29990434 MOAD: Kd=35.5nM
    BindingDB: IC50=255nM, Kd=36nM
    467762 6g07:D (1.66) BS01 peptide ? GO:0003677 ... P51449 29990434
    467763 6g07:D (1.66) BS02 EEZ ? GO:0003677 ... P51449 29990434 MOAD: Kd=35.5nM
    BindingDB: IC50=255nM, Kd=36nM
    467764 6g09:A (1.4) BS01 XYP 3.2.1.4 GO:0004553 ... C5BJ89 30289404
    467765 6g0a:A (2.62) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 30670696
    467766 6g0a:A (2.62) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 30670696
    467767 6g0a:A (2.62) BS03 DTP 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 30670696
    467768 6g0a:A (2.62) BS04 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 30670696
    467769 6g0a:A (2.62) BS05 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 30670696
    467770 6g0a:A (2.62) BS06 FE 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 30670696
    467771 6g0b:A (1.8) BS01 XYP 3.2.1.4 GO:0004553 ... C5BJ89 30289404
    467772 6g0b:A (1.8) BS02 XYP 3.2.1.4 GO:0004553 ... C5BJ89 30289404
    467773 6g0c:A (2.802) BS01 1PS 2.3.2.-
    2.4.2.31
    3.4.22.-
    GO:0106274 ... Q5ZTK4 29795347
    467774 6g0d:A (1.314) BS01 LY2 ? N/A O60885 N/A BindingDB: IC50=12400nM
    467775 6g0e:A (1.613) BS01 EGN ? N/A O60885 N/A
    467776 6g0f:A (1.618) BS01 EGH ? N/A O60885 N/A
    467777 6g0g:A (1.478) BS01 SAS ? N/A O60885 N/A
    467778 6g0h:A (1.907) BS01 EGE ? N/A O60885 N/A
    467779 6g0i:A (2.0) BS01 FE 3.1.3.16 GO:0000164 ... P62136 30403291
    467780 6g0i:A (2.0) BS02 FE 3.1.3.16 GO:0000164 ... P62136 30403291
    467781 6g0i:A (2.0) BS03 MN 3.1.3.16 GO:0000164 ... P62136 30403291
    467782 6g0i:A (2.0) BS04 MN 3.1.3.16 GO:0000164 ... P62136 30403291
    467783 6g0j:A (2.1) BS01 FE 3.1.3.16 GO:0000164 ... P62136 30403291
    467784 6g0j:A (2.1) BS02 FE 3.1.3.16 GO:0000164 ... P62136 30403291
    467785 6g0j:A (2.1) BS03 MN 3.1.3.16 GO:0000164 ... P62136 30403291
    467786 6g0j:A (2.1) BS04 MN 3.1.3.16 GO:0000164 ... P62136 30403291
    467787 6g0l:A (10.0) BS01 dna ? GO:0000786 ... Q92133 30079888
    467788 6g0l:A (10.0) BS02 dna ? GO:0000786 ... Q92133 30079888
    467789 6g0l:B (10.0) BS01 dna ? GO:0000786 ... P62799 30079888
    467790 6g0l:B (10.0) BS02 dna ? GO:0000786 ... P62799 30079888
    467791 6g0l:C (10.0) BS01 dna ? GO:0000786 ... P06897 30079888
    467792 6g0l:C (10.0) BS02 dna ? GO:0000786 ... P06897 30079888
    467793 6g0l:D (10.0) BS01 dna N/A GO:0000786 ... N/A 30079888
    467794 6g0l:D (10.0) BS02 dna N/A GO:0000786 ... N/A 30079888
    467795 6g0l:E (10.0) BS01 dna ? GO:0000786 ... Q92133 30079888
    467796 6g0l:E (10.0) BS02 dna ? GO:0000786 ... Q92133 30079888
    467797 6g0l:F (10.0) BS01 dna ? GO:0000786 ... P62799 30079888
    467798 6g0l:F (10.0) BS02 dna ? GO:0000786 ... P62799 30079888
    467799 6g0l:G (10.0) BS01 dna ? GO:0000786 ... P06897 30079888
    467800 6g0l:G (10.0) BS02 dna ? GO:0000786 ... P06897 30079888

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).