SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    46801 1rbp:A (2.0) BS01 RTL ? GO:0001523 ... P02753 2217163 MOAD: Kd=0.19uM
    46802 1rbq:A (2.104) BS01 KEU 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A
    46803 1rbq:B (2.104) BS01 KEU 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A
    46804 1rbq:C (2.104) BS01 KEU 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A
    46805 1rbq:D (2.104) BS01 KEU 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A
    46806 1rby:A (2.101) BS01 KEU 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A
    46807 1rby:A (2.101) BS02 GAR 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A
    46808 1rby:B (2.101) BS01 KEU 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A
    46809 1rby:B (2.101) BS02 GAR 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A
    46810 1rby:C (2.101) BS01 KEU 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A
    46811 1rby:D (2.101) BS01 KEU 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A
    46812 1rbz:A (2.1) BS01 KT5 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A MOAD: Ki=4nM
    46813 1rbz:B (2.1) BS01 KT5 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A MOAD: Ki=4nM
    46814 1rc0:A (2.05) BS01 KT5 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A MOAD: Ki=4nM
    46815 1rc0:B (2.05) BS01 KT5 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A MOAD: Ki=4nM
    46816 1rc1:A (2.25) BS01 KT3 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A
    46817 1rc1:B (2.25) BS01 KT3 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A
    46818 1rc4:A (1.9) BS01 DDF 1.5.1.3 GO:0004146 ... P0ABQ4 9012674
    46819 1rc4:A (1.9) BS02 NAP 1.5.1.3 GO:0004146 ... P0ABQ4 9012674
    46820 1rc5:A (2.3) BS01 MG 3.1.26.3 GO:0004525 ... O67082 15016361
    46821 1rc5:B (2.3) BS01 MG 3.1.26.3 GO:0004525 ... O67082 15016361
    46822 1rc5:C (2.3) BS01 MG 3.1.26.3 GO:0004525 ... O67082 15016361
    46823 1rc5:D (2.3) BS01 MG 3.1.26.3 GO:0004525 ... O67082 15016361
    46824 1rc7:A (2.15) BS01 rna 3.1.26.3 GO:0003723 ... O67082 15016361
    46825 1rc7:A (2.15) BS02 rna 3.1.26.3 GO:0003723 ... O67082 15016361
    46826 1rc7:A (2.15) BS03 rna 3.1.26.3 GO:0003723 ... O67082 15016361
    46827 1rc7:A (2.15) BS04 rna 3.1.26.3 GO:0003723 ... O67082 15016361
    46828 1rc8:A (2.75) BS01 dna 2.7.1.78
    3.1.3.34    		 GO:0000166 ... P06855 14754987
    46829 1rc8:A (2.75) BS02 CA 2.7.1.78
    3.1.3.34    		 GO:0000166 ... P06855 14754987
    46830 1rc8:A (2.75) BS03 ADP 2.7.1.78
    3.1.3.34    		 GO:0000166 ... P06855 14754987
    46831 1rca:A (1.9) BS01 CGP 4.6.1.18 GO:0003676 ... P61823 15299807
    46832 1rca:A (1.9) BS02 CGP 4.6.1.18 GO:0003676 ... P61823 15299807
    46833 1rcf:A (1.4) BS01 FMN ? GO:0009055 ... P0A3D9 15299298
    46834 1rcj:A (1.63) BS01 MA4 3.5.2.6 GO:0008800 ... P0AD64 14744126
    46835 1rcj:A (1.63) BS02 MA4 3.5.2.6 GO:0008800 ... P0AD64 14744126
    46836 1rcj:A (1.63) BS03 TBI 3.5.2.6 GO:0008800 ... P0AD64 14744126
    46837 1rcn:E (2.32) BS01 dna 4.6.1.18 GO:0003676 ... P61823 8063789
    46838 1rco:B (2.3) BS01 XDP 4.1.1.39 GO:0000287 ... P00875 8955130
    46839 1rco:B (2.3) BS02 XDP 4.1.1.39 GO:0000287 ... P00875 8955130
    46840 1rco:E (2.3) BS01 XDP 4.1.1.39 GO:0000287 ... P00875 8955130
    46841 1rco:E (2.3) BS02 XDP 4.1.1.39 GO:0000287 ... P00875 8955130
    46842 1rco:H (2.3) BS01 XDP 4.1.1.39 GO:0000287 ... P00875 8955130
    46843 1rco:H (2.3) BS02 XDP 4.1.1.39 GO:0000287 ... P00875 8955130
    46844 1rco:K (2.3) BS01 XDP 4.1.1.39 GO:0000287 ... P00875 8955130
    46845 1rco:K (2.3) BS02 XDP 4.1.1.39 GO:0000287 ... P00875 8955130
    46846 1rco:L (2.3) BS01 XDP 4.1.1.39 GO:0000287 ... P00875 8955130
    46847 1rco:L (2.3) BS02 XDP 4.1.1.39 GO:0000287 ... P00875 8955130
    46848 1rco:O (2.3) BS01 XDP 4.1.1.39 GO:0000287 ... P00875 8955130
    46849 1rco:O (2.3) BS02 XDP 4.1.1.39 GO:0000287 ... P00875 8955130
    46850 1rco:R (2.3) BS01 XDP 4.1.1.39 GO:0000287 ... P00875 8955130
    46851 1rco:V (2.3) BS01 XDP 4.1.1.39 GO:0000287 ... P00875 8955130
    46852 1rco:V (2.3) BS02 XDP 4.1.1.39 GO:0000287 ... P00875 8955130
    46853 1rcp:A (2.0) BS01 HEM ? GO:0005506 ... P00147 8676382
    46854 1rcp:B (2.0) BS01 HEM ? GO:0005506 ... P00147 8676382
    46855 1rcq:A (1.45) BS01 PLP 5.1.1.1 GO:0003824 ... Q9HTQ2 14674749
    46856 1rcq:A (1.45) BS02 DLY 5.1.1.1 GO:0003824 ... Q9HTQ2 14674749
    46857 1rcs:A (-1.00) BS01 dna ? GO:0003676 ... P0A881 8176748
    46858 1rcs:A (-1.00) BS02 dna ? GO:0003676 ... P0A881 8176748
    46859 1rcs:A (-1.00) BS03 TRP ? GO:0003676 ... P0A881 8176748
    46860 1rcs:B (-1.00) BS01 dna ? GO:0003676 ... P0A881 8176748
    46861 1rcs:B (-1.00) BS02 dna ? GO:0003676 ... P0A881 8176748
    46862 1rcs:B (-1.00) BS03 TRP ? GO:0003676 ... P0A881 8176748
    46863 1rct:E (2.8) BS01 NOS 2.4.2.1 GO:0000255 ... P00491 14706628
    46864 1rcv:D (1.6) BS01 BV1 ? GO:0005515 ... P01556 15380181 MOAD: ic50=29uM
    46865 1rcv:E (1.6) BS01 BV1 ? GO:0005515 ... P01556 15380181 MOAD: ic50=29uM
    46866 1rcv:F (1.6) BS01 BV1 ? GO:0005515 ... P01556 15380181 MOAD: ic50=29uM
    46867 1rcv:F (1.6) BS02 BV1 ? GO:0005515 ... P01556 15380181 MOAD: ic50=29uM
    46868 1rcv:G (1.6) BS01 BV1 ? GO:0005515 ... P01556 15380181 MOAD: ic50=29uM
    46869 1rcv:H (1.6) BS01 BV1 ? GO:0005515 ... P01556 15380181 MOAD: ic50=29uM
    46870 1rcw:A (2.5) BS01 FE 1.3.3.- GO:0005576 ... O84616 15087448
    46871 1rcw:A (2.5) BS02 FE 1.3.3.- GO:0005576 ... O84616 15087448
    46872 1rcw:B (2.5) BS01 FE 1.3.3.- GO:0005576 ... O84616 15087448
    46873 1rcw:B (2.5) BS02 FE 1.3.3.- GO:0005576 ... O84616 15087448
    46874 1rcw:C (2.5) BS01 FE 1.3.3.- GO:0005576 ... O84616 15087448
    46875 1rcw:C (2.5) BS02 FE 1.3.3.- GO:0005576 ... O84616 15087448
    46876 1rcx:B (2.4) BS01 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    46877 1rcx:B (2.4) BS02 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    46878 1rcx:E (2.4) BS01 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    46879 1rcx:E (2.4) BS02 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    46880 1rcx:H (2.4) BS01 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    46881 1rcx:H (2.4) BS02 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    46882 1rcx:K (2.4) BS01 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    46883 1rcx:K (2.4) BS02 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    46884 1rcx:L (2.4) BS01 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    46885 1rcx:L (2.4) BS02 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    46886 1rcx:O (2.4) BS01 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    46887 1rcx:O (2.4) BS02 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    46888 1rcx:R (2.4) BS01 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    46889 1rcx:R (2.4) BS02 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    46890 1rcx:V (2.4) BS01 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    46891 1rcx:V (2.4) BS02 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    46892 1rcy:A (1.9) BS01 CU ? GO:0005507 ... P0C918 8947572
    46893 1rd4:A (2.4) BS01 L08 ? N/A P20701 14992576 MOAD: Kd=18.3nM
    BindingDB: Kd=18nM
    46894 1rd4:B (2.4) BS01 L08 ? N/A P20701 14992576 MOAD: Kd=18.3nM
    BindingDB: Kd=18nM
    46895 1rd4:C (2.4) BS01 L08 ? N/A P20701 14992576 MOAD: Kd=18.3nM
    BindingDB: Kd=18nM
    46896 1rd4:D (2.4) BS01 L08 ? N/A P20701 14992576 MOAD: Kd=18.3nM
    BindingDB: Kd=18nM
    46897 1rd9:D (1.44) BS01 BV2 ? GO:0005515 ... P01556 15380181 MOAD: ic50=13uM
    46898 1rd9:D (1.44) BS02 BV2 ? GO:0005515 ... P01556 15380181 MOAD: ic50=13uM
    46899 1rd9:E (1.44) BS01 BV2 ? GO:0005515 ... P01556 15380181 MOAD: ic50=13uM
    46900 1rd9:F (1.44) BS01 BV2 ? GO:0005515 ... P01556 15380181 MOAD: ic50=13uM
    46901 1rd9:F (1.44) BS02 BV2 ? GO:0005515 ... P01556 15380181 MOAD: ic50=13uM
    46902 1rd9:G (1.44) BS01 BV2 ? GO:0005515 ... P01556 15380181 MOAD: ic50=13uM
    46903 1rd9:H (1.44) BS01 BV2 ? GO:0005515 ... P01556 15380181 MOAD: ic50=13uM
    46904 1rdd:A (2.8) BS01 MG 3.1.26.4 GO:0000287 ... P0A7Y4 8108376
    46905 1rdf:A (2.8) BS01 MG 3.11.1.1 GO:0000287 ... O31156 15005616
    46906 1rdf:A (2.8) BS02 ESA 3.11.1.1 GO:0000287 ... O31156 15005616
    46907 1rdf:B (2.8) BS01 MG 3.11.1.1 GO:0000287 ... O31156 15005616
    46908 1rdf:B (2.8) BS02 ESA 3.11.1.1 GO:0000287 ... O31156 15005616
    46909 1rdf:C (2.8) BS01 MG 3.11.1.1 GO:0000287 ... O31156 15005616
    46910 1rdf:C (2.8) BS02 ESA 3.11.1.1 GO:0000287 ... O31156 15005616
    46911 1rdf:D (2.8) BS01 MG 3.11.1.1 GO:0000287 ... O31156 15005616
    46912 1rdf:D (2.8) BS02 ESA 3.11.1.1 GO:0000287 ... O31156 15005616
    46913 1rdf:E (2.8) BS01 MG 3.11.1.1 GO:0000287 ... O31156 15005616
    46914 1rdf:E (2.8) BS02 ESA 3.11.1.1 GO:0000287 ... O31156 15005616
    46915 1rdf:F (2.8) BS01 MG 3.11.1.1 GO:0000287 ... O31156 15005616
    46916 1rdf:F (2.8) BS02 ESA 3.11.1.1 GO:0000287 ... O31156 15005616
    46917 1rdg:A (1.4) BS01 FE ? GO:0005506 ... P00270 3441010
    46918 1rdi:1 (1.8) BS01 MFU ? N/A P08661 8557671 MOAD: Ki=8.8mM
    46919 1rdi:1 (1.8) BS02 CA ? N/A P08661 8557671
    46920 1rdi:1 (1.8) BS03 CA ? N/A P08661 8557671
    46921 1rdi:2 (1.8) BS01 MFU ? N/A P08661 8557671 MOAD: Ki=8.8mM
    46922 1rdi:2 (1.8) BS02 CA ? N/A P08661 8557671
    46923 1rdi:2 (1.8) BS03 CA ? N/A P08661 8557671
    46924 1rdj:1 (1.8) BS01 MFB ? N/A P08661 8557671 MOAD: Ki=21.7mM
    46925 1rdj:1 (1.8) BS02 CA ? N/A P08661 8557671
    46926 1rdj:1 (1.8) BS03 CA ? N/A P08661 8557671
    46927 1rdj:2 (1.8) BS01 MFB ? N/A P08661 8557671 MOAD: Ki=21.7mM
    46928 1rdj:2 (1.8) BS02 CA ? N/A P08661 8557671
    46929 1rdj:2 (1.8) BS03 CA ? N/A P08661 8557671
    46930 1rdk:1 (1.8) BS01 GAL ? N/A P08661 8557671 MOAD: Ki=114mM
    46931 1rdk:1 (1.8) BS02 CA ? N/A P08661 8557671
    46932 1rdk:1 (1.8) BS03 CA ? N/A P08661 8557671
    46933 1rdk:2 (1.8) BS01 GAL ? N/A P08661 8557671 MOAD: Ki=114mM
    46934 1rdk:2 (1.8) BS02 CA ? N/A P08661 8557671
    46935 1rdk:2 (1.8) BS03 CA ? N/A P08661 8557671
    46936 1rdl:1 (1.7) BS01 MMA ? N/A P08661 8557671 MOAD: Ki=5.7mM
    46937 1rdl:1 (1.7) BS02 CA ? N/A P08661 8557671
    46938 1rdl:1 (1.7) BS03 CA ? N/A P08661 8557671
    46939 1rdl:2 (1.7) BS01 MMA ? N/A P08661 8557671 MOAD: Ki=5.7mM
    46940 1rdl:2 (1.7) BS02 CA ? N/A P08661 8557671
    46941 1rdl:2 (1.7) BS03 CA ? N/A P08661 8557671
    46942 1rdm:1 (1.9) BS01 MMA ? N/A P08661 8557671 MOAD: Ki=5.7mM
    46943 1rdm:1 (1.9) BS02 MMA ? N/A P08661 8557671 MOAD: Ki=5.7mM
    46944 1rdm:1 (1.9) BS03 CA ? N/A P08661 8557671
    46945 1rdm:1 (1.9) BS04 CA ? N/A P08661 8557671
    46946 1rdm:2 (1.9) BS01 MMA ? N/A P08661 8557671 MOAD: Ki=5.7mM
    46947 1rdm:2 (1.9) BS02 CA ? N/A P08661 8557671
    46948 1rdm:2 (1.9) BS03 CA ? N/A P08661 8557671
    46949 1rdn:1 (1.8) BS01 CA ? N/A P08661 8557671
    46950 1rdn:1 (1.8) BS02 CA ? N/A P08661 8557671
    46951 1rdn:2 (1.8) BS01 CA ? N/A P08661 8557671
    46952 1rdn:2 (1.8) BS02 CA ? N/A P08661 8557671
    46953 1rdo:1 (1.7) BS01 CA ? N/A P08661 8557671
    46954 1rdo:1 (1.7) BS02 CA ? N/A P08661 8557671
    46955 1rdo:2 (1.7) BS01 CA ? N/A P08661 8557671
    46956 1rdo:2 (1.7) BS02 CA ? N/A P08661 8557671
    46957 1rdp:D (1.35) BS01 BV3 ? GO:0005515 ... P01556 15380181 MOAD: ic50=9uM
    46958 1rdp:E (1.35) BS01 BV3 ? GO:0005515 ... P01556 15380181 MOAD: ic50=9uM
    46959 1rdp:F (1.35) BS01 BV3 ? GO:0005515 ... P01556 15380181 MOAD: ic50=9uM
    46960 1rdp:G (1.35) BS01 BV3 ? GO:0005515 ... P01556 15380181 MOAD: ic50=9uM
    46961 1rdp:H (1.35) BS01 BV3 ? GO:0005515 ... P01556 15380181 MOAD: ic50=9uM
    46962 1rdq:E (1.26) BS01 peptide 2.7.11.11 GO:0000287 ... P05132 14757059
    46963 1rdq:E (1.26) BS02 MG 2.7.11.11 GO:0000287 ... P05132 14757059
    46964 1rdq:E (1.26) BS03 ADP 2.7.11.11 GO:0000287 ... P05132 14757059
    46965 1rdq:E (1.26) BS04 ATP 2.7.11.11 GO:0000287 ... P05132 14757059
    46966 1rdr:A (2.4) BS01 CA 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15    		 GO:0003723 ... P03300 9309225
    46967 1rds:A (1.8) BS01 GPC 4.6.1.24 GO:0003723 ... P00653 8218254
    46968 1rdt:A (2.4) BS01 peptide ? GO:0003677 ... P19793 15056000
    46969 1rdt:A (2.4) BS02 L79 ? GO:0003677 ... P19793 15056000 MOAD: Ki=6nM
    46970 1rdt:D (2.4) BS01 peptide ? GO:0003677 ... P37231 15056000
    46971 1rdt:D (2.4) BS02 570 ? GO:0003677 ... P37231 15056000 BindingDB: Ki=1.1nM, EC50=0.338844nM, IC50=25nM
    46972 1rdv:A (2.0) BS01 FE ? GO:0005506 ... P15412 10089348
    46973 1rdw:X (2.3) BS01 ATP 3.6.4.- GO:0000287 ... P68135 15099571
    46974 1rdw:X (2.3) BS02 LAR 3.6.4.- GO:0000287 ... P68135 15099571
    46975 1rdx:A (2.75) BS01 F6P 3.1.3.11 GO:0000122 ... P00636 8844845
    46976 1rdx:B (2.75) BS01 F6P 3.1.3.11 GO:0000122 ... P00636 8844845
    46977 1rdy:A (2.2) BS01 F6P 3.1.3.11 GO:0000122 ... P00636 8844845
    46978 1rdy:A (2.2) BS02 AMP 3.1.3.11 GO:0000122 ... P00636 8844845 BindingDB: IC50=1300nM
    46979 1rdy:B (2.2) BS01 F6P 3.1.3.11 GO:0000122 ... P00636 8844845
    46980 1rdy:B (2.2) BS02 AMP 3.1.3.11 GO:0000122 ... P00636 8844845 BindingDB: IC50=1300nM
    46981 1rdz:A (2.05) BS01 F6P 3.1.3.11 GO:0000122 ... P00636 8844845
    46982 1rdz:A (2.05) BS02 AMP 3.1.3.11 GO:0000122 ... P00636 8844845 BindingDB: IC50=1300nM
    46983 1rdz:B (2.05) BS01 F6P 3.1.3.11 GO:0000122 ... P00636 8844845
    46984 1rdz:B (2.05) BS02 AMP 3.1.3.11 GO:0000122 ... P00636 8844845 BindingDB: IC50=1300nM
    46985 1re0:A (2.4) BS01 GDP 3.6.5.2 GO:0000139 ... P84077 14690595
    46986 1re0:A (2.4) BS02 AFB 3.6.5.2 GO:0000139 ... P84077 14690595
    46987 1re1:A (2.5) BS01 NA3 3.4.22.56 GO:0004197 ... P42574 15115390 BindingDB: IC50=6000nM
    46988 1re1:B (2.5) BS01 NA3 3.4.22.56 GO:0004197 ... P42574 15115390 BindingDB: IC50=6000nM
    46989 1re2:A (2.3) BS01 GAL 3.2.1.17 GO:0003796 ... P61626 9888793
    46990 1re3:B (2.45) BS01 CA ? GO:0005102 ... P02675 14992584
    46991 1re3:C (2.45) BS01 peptide ? GO:0005102 ... P02679 14992584
    46992 1re3:C (2.45) BS02 CA ? GO:0005102 ... P02679 14992584
    46993 1re3:C (2.45) BS03 CA ? GO:0005102 ... P02679 14992584
    46994 1re3:E (2.45) BS01 CA ? GO:0005102 ... P02675 14992584
    46995 1re3:F (2.45) BS01 peptide ? GO:0005102 ... P02679 14992584
    46996 1re3:F (2.45) BS02 CA ? GO:0005102 ... P02679 14992584
    46997 1re4:B (2.7) BS01 CA ? GO:0005102 ... P02675 14992584
    46998 1re4:B (2.7) BS02 CA ? GO:0005102 ... P02675 14992584
    46999 1re4:C (2.7) BS01 CA ? GO:0005102 ... P02679 14992584
    47000 1re4:C (2.7) BS02 CA ? GO:0005102 ... P02679 14992584
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).