SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    472801 6gz3:BG (3.6) BS01 rna ? GO:0003735 ... G1TM55 30517857
    472802 6gz3:BH (3.6) BS01 rna ? GO:0003735 ... G1SVB0 30517857
    472803 6gz3:BI (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472804 6gz3:BI (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472805 6gz3:BJ (3.6) BS01 rna ? GO:0003723 ... B7NZS8 30517857
    472806 6gz3:BK (3.6) BS01 rna ? N/A G1TPV3 30517857
    472807 6gz3:BL (3.6) BS01 rna ? GO:0003735 ... G1TRM4 30517857
    472808 6gz3:BM (3.6) BS01 rna ? GO:0003735 ... G1SFR8 30517857
    472809 6gz3:BN (3.6) BS01 rna ? GO:0003735 ... G1SP51 30517857
    472810 6gz3:BN (3.6) BS02 rna ? GO:0003735 ... G1SP51 30517857
    472811 6gz3:BO (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472812 6gz3:BP (3.6) BS01 rna N/A GO:0003723 ... N/A 30517857
    472813 6gz3:BQ (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472814 6gz3:BR (3.6) BS01 rna ? GO:0003735 ... G1TU13 30517857
    472815 6gz3:BS (3.6) BS01 rna ? GO:0003676 ... G1TPG3 30517857
    472816 6gz3:BT (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472817 6gz3:BU (3.6) BS01 rna N/A GO:0003723 ... N/A 30517857
    472818 6gz3:BV (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472819 6gz3:BW (3.6) BS01 rna ? GO:0003735 ... G1TG89 30517857
    472820 6gz3:BX (3.6) BS01 rna ? GO:0003735 ... G1SZ47 30517857
    472821 6gz3:BY (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472822 6gz3:BZ (3.6) BS01 rna ? N/A G1TDB3 30517857
    472823 6gz3:Ba (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472824 6gz3:Ba (3.6) BS02 ZN N/A GO:0003735 ... N/A 30517857
    472825 6gz3:Bb (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472826 6gz3:Bc (3.6) BS01 rna ? GO:0000028 ... G1TIB4 30517857
    472827 6gz3:Bd (3.6) BS01 rna ? GO:0002181 ... G1U7M4 30517857
    472828 6gz3:Bd (3.6) BS02 ZN ? GO:0002181 ... G1U7M4 30517857
    472829 6gz3:Be (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472830 6gz3:Bf (3.6) BS01 rna ? GO:0003735 ... G1SK22 30517857
    472831 6gz3:Bg (3.6) BS01 rna ? GO:0001891 ... G1SJB4 30517857
    472832 6gz3:Ct (3.6) BS01 rna N/A GO:0003924 ... N/A 30517857
    472833 6gz3:Ct (3.6) BS02 rna N/A GO:0003924 ... N/A 30517857
    472834 6gz3:Ct (3.6) BS03 rna N/A GO:0003924 ... N/A 30517857
    472835 6gz3:Ct (3.6) BS04 GNP N/A GO:0003924 ... N/A 30517857
    472836 6gz4:AA (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472837 6gz4:AA (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472838 6gz4:AB (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472839 6gz4:AC (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472840 6gz4:AC (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472841 6gz4:AD (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472842 6gz4:AD (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472843 6gz4:AE (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472844 6gz4:AF (3.6) BS01 rna N/A GO:0000463 ... N/A 30517857
    472845 6gz4:AF (3.6) BS02 rna N/A GO:0000463 ... N/A 30517857
    472846 6gz4:AG (3.6) BS01 rna N/A GO:0003723 ... N/A 30517857
    472847 6gz4:AG (3.6) BS02 rna N/A GO:0003723 ... N/A 30517857
    472848 6gz4:AH (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472849 6gz4:AI (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472850 6gz4:AI (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472851 6gz4:AI (3.6) BS03 rna N/A GO:0003735 ... N/A 30517857
    472852 6gz4:AJ (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472853 6gz4:AJ (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472854 6gz4:AK (3.6) BS01 rna N/A N/A N/A 30517857
    472855 6gz4:AL (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472856 6gz4:AL (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472857 6gz4:AM (3.6) BS01 rna N/A GO:0003723 ... N/A 30517857
    472858 6gz4:AN (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472859 6gz4:AN (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472860 6gz4:AO (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472861 6gz4:AP (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472862 6gz4:AP (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472863 6gz4:AQ (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472864 6gz4:AR (3.6) BS01 rna N/A GO:0003723 ... N/A 30517857
    472865 6gz4:AR (3.6) BS02 rna N/A GO:0003723 ... N/A 30517857
    472866 6gz4:AS (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472867 6gz4:AS (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472868 6gz4:AT (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472869 6gz4:AT (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472870 6gz4:AU (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472871 6gz4:AV (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472872 6gz4:AW (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472873 6gz4:AW (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472874 6gz4:AX (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472875 6gz4:AX (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472876 6gz4:AY (3.6) BS01 rna N/A GO:0003723 ... N/A 30517857
    472877 6gz4:AY (3.6) BS02 rna N/A GO:0003723 ... N/A 30517857
    472878 6gz4:AZ (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472879 6gz4:Aa (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472880 6gz4:Ab (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472881 6gz4:Ac (3.6) BS01 rna N/A GO:0003723 ... N/A 30517857
    472882 6gz4:Ad (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472883 6gz4:Ae (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472884 6gz4:Af (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472885 6gz4:Ag (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472886 6gz4:Ah (3.6) BS01 rna N/A GO:0000463 ... N/A 30517857
    472887 6gz4:Ah (3.6) BS02 rna N/A GO:0000463 ... N/A 30517857
    472888 6gz4:Ai (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472889 6gz4:Aj (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472890 6gz4:Aj (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472891 6gz4:Aj (3.6) BS03 ZN N/A GO:0003735 ... N/A 30517857
    472892 6gz4:Ak (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472893 6gz4:Al (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472894 6gz4:Al (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472895 6gz4:Am (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472896 6gz4:Ao (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472897 6gz4:Ao (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472898 6gz4:Ap (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472899 6gz4:Ap (3.6) BS02 ZN N/A GO:0003735 ... N/A 30517857
    472900 6gz4:Aq (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472901 6gz4:At (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472902 6gz4:Au (3.6) BS01 rna N/A GO:0003723 ... N/A 30517857
    472903 6gz4:BA (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472904 6gz4:BB (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472905 6gz4:BB (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472906 6gz4:BC (3.6) BS01 rna N/A GO:0003723 ... N/A 30517857
    472907 6gz4:BD (3.6) BS01 rna N/A GO:0003723 ... N/A 30517857
    472908 6gz4:BD (3.6) BS02 rna N/A GO:0003723 ... N/A 30517857
    472909 6gz4:BD (3.6) BS03 MG N/A GO:0003723 ... N/A 30517857
    472910 6gz4:BD (3.6) BS04 MG N/A GO:0003723 ... N/A 30517857
    472911 6gz4:BE (3.6) BS01 rna N/A GO:0003723 ... N/A 30517857
    472912 6gz4:BF (3.6) BS01 rna N/A GO:0003723 ... N/A 30517857
    472913 6gz4:BG (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472914 6gz4:BH (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472915 6gz4:BI (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472916 6gz4:BI (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472917 6gz4:BJ (3.6) BS01 rna N/A GO:0003723 ... N/A 30517857
    472918 6gz4:BK (3.6) BS01 rna N/A N/A N/A 30517857
    472919 6gz4:BL (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472920 6gz4:BM (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472921 6gz4:BN (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472922 6gz4:BN (3.6) BS02 rna N/A GO:0003735 ... N/A 30517857
    472923 6gz4:BO (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472924 6gz4:BP (3.6) BS01 rna N/A GO:0003723 ... N/A 30517857
    472925 6gz4:BQ (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472926 6gz4:BR (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472927 6gz4:BS (3.6) BS01 rna N/A GO:0003676 ... N/A 30517857
    472928 6gz4:BT (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472929 6gz4:BU (3.6) BS01 rna N/A GO:0003723 ... N/A 30517857
    472930 6gz4:BW (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472931 6gz4:BX (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472932 6gz4:BY (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472933 6gz4:BZ (3.6) BS01 rna N/A N/A N/A 30517857
    472934 6gz4:Ba (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472935 6gz4:Ba (3.6) BS02 ZN N/A GO:0003735 ... N/A 30517857
    472936 6gz4:Bb (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472937 6gz4:Bc (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472938 6gz4:Bd (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472939 6gz4:Bd (3.6) BS02 MG N/A GO:0003735 ... N/A 30517857
    472940 6gz4:Bd (3.6) BS03 ZN N/A GO:0003735 ... N/A 30517857
    472941 6gz4:Be (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472942 6gz4:Bf (3.6) BS01 rna N/A GO:0003735 ... N/A 30517857
    472943 6gz4:Bg (3.6) BS01 rna N/A GO:0043022 ... N/A 30517857
    472944 6gz4:Ct (3.6) BS01 rna N/A GO:0003924 ... N/A 30517857
    472945 6gz4:Ct (3.6) BS02 rna N/A GO:0003924 ... N/A 30517857
    472946 6gz4:Ct (3.6) BS03 rna N/A GO:0003924 ... N/A 30517857
    472947 6gz4:Ct (3.6) BS04 GNP N/A GO:0003924 ... N/A 30517857
    472948 6gz5:AA (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472949 6gz5:AA (3.5) BS02 rna N/A GO:0003735 ... N/A 30517857
    472950 6gz5:AB (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472951 6gz5:AC (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472952 6gz5:AC (3.5) BS02 rna N/A GO:0003735 ... N/A 30517857
    472953 6gz5:AD (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472954 6gz5:AD (3.5) BS02 rna N/A GO:0003735 ... N/A 30517857
    472955 6gz5:AE (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472956 6gz5:AF (3.5) BS01 rna N/A GO:0000463 ... N/A 30517857
    472957 6gz5:AF (3.5) BS02 rna N/A GO:0000463 ... N/A 30517857
    472958 6gz5:AG (3.5) BS01 rna N/A GO:0003723 ... N/A 30517857
    472959 6gz5:AG (3.5) BS02 rna N/A GO:0003723 ... N/A 30517857
    472960 6gz5:AH (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472961 6gz5:AI (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472962 6gz5:AI (3.5) BS02 rna N/A GO:0003735 ... N/A 30517857
    472963 6gz5:AI (3.5) BS03 rna N/A GO:0003735 ... N/A 30517857
    472964 6gz5:AJ (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472965 6gz5:AJ (3.5) BS02 rna N/A GO:0003735 ... N/A 30517857
    472966 6gz5:AJ (3.5) BS03 rna N/A GO:0003735 ... N/A 30517857
    472967 6gz5:AK (3.5) BS01 rna N/A N/A N/A 30517857
    472968 6gz5:AL (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472969 6gz5:AL (3.5) BS02 rna N/A GO:0003735 ... N/A 30517857
    472970 6gz5:AM (3.5) BS01 rna N/A GO:0003723 ... N/A 30517857
    472971 6gz5:AN (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472972 6gz5:AN (3.5) BS02 rna N/A GO:0003735 ... N/A 30517857
    472973 6gz5:AO (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472974 6gz5:AP (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472975 6gz5:AP (3.5) BS02 rna N/A GO:0003735 ... N/A 30517857
    472976 6gz5:AQ (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472977 6gz5:AR (3.5) BS01 rna N/A GO:0003723 ... N/A 30517857
    472978 6gz5:AR (3.5) BS02 rna N/A GO:0003723 ... N/A 30517857
    472979 6gz5:AS (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472980 6gz5:AS (3.5) BS02 rna N/A GO:0003735 ... N/A 30517857
    472981 6gz5:AT (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472982 6gz5:AT (3.5) BS02 rna N/A GO:0003735 ... N/A 30517857
    472983 6gz5:AU (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472984 6gz5:AV (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472985 6gz5:AW (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472986 6gz5:AW (3.5) BS02 rna N/A GO:0003735 ... N/A 30517857
    472987 6gz5:AX (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472988 6gz5:AX (3.5) BS02 rna N/A GO:0003735 ... N/A 30517857
    472989 6gz5:AY (3.5) BS01 rna N/A GO:0003723 ... N/A 30517857
    472990 6gz5:AY (3.5) BS02 rna N/A GO:0003723 ... N/A 30517857
    472991 6gz5:AZ (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472992 6gz5:Aa (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472993 6gz5:Ab (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472994 6gz5:Ac (3.5) BS01 rna N/A GO:0003723 ... N/A 30517857
    472995 6gz5:Ad (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472996 6gz5:Ae (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472997 6gz5:Af (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472998 6gz5:Ag (3.5) BS01 rna N/A GO:0003735 ... N/A 30517857
    472999 6gz5:Ah (3.5) BS01 rna N/A GO:0000463 ... N/A 30517857
    473000 6gz5:Ah (3.5) BS02 rna N/A GO:0000463 ... N/A 30517857

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).