SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 2364 2365 2366 2367 2368 2369 2370 2371 2372 2373 2374 2375 2376 2377 2378 2379 2380 2381 2382 2383 2384 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    474601 6h8k:H (3.79) BS01 FES N/A N/A N/A 30374105
    474602 6h8k:I (3.79) BS01 SF4 1.6.99.3 GO:0016020 ... Q9UUT8 30374105
    474603 6h8k:I (3.79) BS02 SF4 1.6.99.3 GO:0016020 ... Q9UUT8 30374105
    474604 6h8k:K (3.79) BS01 SF4 1.6.99.3 GO:0008137 ... Q9UUT7 30374105
    474605 6h8k:L (3.79) BS01 peptide 7.1.1.2 GO:0016651 ... Q9B6D4 30374105
    474606 6h8k:L (3.79) BS02 peptide 7.1.1.2 GO:0016651 ... Q9B6D4 30374105
    474607 6h8k:Y (3.79) BS01 peptide N/A N/A N/A 30374105
    474608 6h8k:j (3.79) BS01 peptide N/A N/A N/A 30374105
    474609 6h8l:A (1.54) BS01 ZN 3.5.1.- GO:0005975 ... O34798 31690626
    474610 6h8l:B (1.54) BS01 ZN 3.5.1.- GO:0005975 ... O34798 31690626
    474611 6h8n:A (1.26) BS01 ZN 3.5.1.- GO:0005975 ... O34798 31690626
    474612 6h8n:B (1.26) BS01 ZN 3.5.1.- GO:0005975 ... O34798 31690626
    474613 6h8p:A (1.983) BS01 peptide 1.14.11.66
    1.14.11.69
    N/A O75164 30156264
    474614 6h8p:A (1.983) BS02 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 30156264
    474615 6h8p:B (1.983) BS01 peptide 1.14.11.66
    1.14.11.69
    N/A O75164 30156264
    474616 6h8p:B (1.983) BS02 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 30156264
    474617 6h8q:A (3.631) BS01 dna ? GO:0000775 ... P40541 30109982
    474618 6h8q:B (3.631) BS01 peptide ? GO:0000775 ... P40541 30109982
    474619 6h8q:B (3.631) BS02 dna ? GO:0000775 ... P40541 30109982
    474620 6h8r:A (1.66) BS01 FWB 3.1.3.48 GO:0004725 ... P54829 30207464
    474621 6h8s:A (1.771) BS01 FSZ 3.1.3.48 GO:0004725 ... P54830 30207464
    474622 6h8t:A (2.1) BS01 YXZ 3.4.22.2 GO:0006508 ... P00784 30175357
    474623 6h8t:J (2.1) BS01 YXX 3.4.22.2 GO:0006508 ... P00784 30175357
    474624 6h8u:A (1.9) BS01 MG 5.4.2.6 GO:0000287 ... P71447 N/A
    474625 6h8v:A (1.84) BS01 MG 5.4.2.6 GO:0000287 ... P71447 N/A
    474626 6h8v:B (1.84) BS01 MG 5.4.2.6 GO:0000287 ... P71447 N/A
    474627 6h8w:A (1.98) BS01 MG 5.4.2.6 GO:0000287 ... P71447 N/A
    474628 6h8w:A (1.98) BS02 ALF 5.4.2.6 GO:0000287 ... P71447 N/A
    474629 6h8x:A (1.83) BS01 MG 5.4.2.6 GO:0000287 ... P71447 N/A
    474630 6h8x:A (1.83) BS02 MGF 5.4.2.6 GO:0000287 ... P71447 N/A
    474631 6h8x:B (1.83) BS01 MG 5.4.2.6 GO:0000287 ... P71447 N/A
    474632 6h8x:B (1.83) BS02 PDO 5.4.2.6 GO:0000287 ... P71447 N/A
    474633 6h8x:B (1.83) BS03 MGF 5.4.2.6 GO:0000287 ... P71447 N/A
    474634 6h8y:A (1.89) BS01 MG 5.4.2.6 GO:0000287 ... P71447 N/A
    474635 6h8y:A (1.89) BS02 ALF 5.4.2.6 GO:0000287 ... P71447 N/A
    474636 6h8z:A (1.6) BS01 MG 5.4.2.6 GO:0000287 ... P71447 N/A
    474637 6h8z:A (1.6) BS02 MGF 5.4.2.6 GO:0000287 ... P71447 N/A
    474638 6h90:A (1.31) BS01 MG 5.4.2.6 GO:0000287 ... P71447 N/A
    474639 6h90:A (1.31) BS02 BEF 5.4.2.6 GO:0000287 ... P71447 N/A
    474640 6h91:A (2.38) BS01 MG 5.4.2.6 GO:0000287 ... P71447 N/A
    474641 6h91:A (2.38) BS02 UVW 5.4.2.6 GO:0000287 ... P71447 N/A
    474642 6h91:B (2.38) BS01 MG 5.4.2.6 GO:0000287 ... P71447 N/A
    474643 6h91:B (2.38) BS02 UVW 5.4.2.6 GO:0000287 ... P71447 N/A
    474644 6h92:A (2.6) BS01 MG 5.4.2.6 GO:0000287 ... P71447 N/A
    474645 6h92:B (2.6) BS01 UVW 5.4.2.6 GO:0000287 ... P71447 N/A
    474646 6h93:A (1.77) BS01 MG 5.4.2.6 GO:0000287 ... P71447 N/A
    474647 6h93:A (1.77) BS02 PDO 5.4.2.6 GO:0000287 ... P71447 N/A
    474648 6h93:B (1.77) BS01 MG 5.4.2.6 GO:0000287 ... P71447 N/A
    474649 6h94:A (1.49) BS01 MG 5.4.2.6 GO:0000287 ... P71447 N/A
    474650 6h96:A (1.55) BS01 FWE ? N/A Q8KRS7 30422653
    474651 6h96:B (1.55) BS01 FWE ? N/A Q8KRS7 30422653
    474652 6h98:A (1.8) BS01 MG ? GO:0004792 ... B3ECE3 30943021
    474653 6h99:A (1.6) BS01 MG ? GO:0004792 ... B3ECE3 30943021
    474654 6h99:A (1.6) BS02 MG ? GO:0004792 ... B3ECE3 30943021
    474655 6h99:A (1.6) BS03 MG ? GO:0004792 ... B3ECE3 30943021
    474656 6h9a:A (2.831) BS01 AVJ ? GO:0004792 ... B3ECE3 30943021
    474657 6h9b:A (2.75) BS01 GTP ? GO:0000226 ... D0VWZ0 30525602
    474658 6h9b:A (2.75) BS02 FWH ? GO:0000226 ... D0VWZ0 30525602
    474659 6h9b:B (2.75) BS01 GDP ? GO:0003924 ... D0VWY9 30525602
    474660 6h9b:B (2.75) BS02 FWH ? GO:0003924 ... D0VWY9 30525602
    474661 6h9b:C (2.75) BS01 GTP ? GO:0000226 ... D0VWZ0 30525602
    474662 6h9b:C (2.75) BS02 FWH ? GO:0000226 ... D0VWZ0 30525602
    474663 6h9b:D (2.75) BS01 GDP ? GO:0003924 ... D0VWY9 30525602
    474664 6h9b:D (2.75) BS02 FWH ? GO:0003924 ... D0VWY9 30525602
    474665 6h9c:D (3.74) BS01 peptide ? N/A A0A1C7A3R1 30862777
    474666 6h9e:A (1.82) BS01 B12 5.4.99.1 GO:0005515 ... P80078 35793207
    474667 6h9e:B (1.82) BS01 B12 5.4.99.1 GO:0003824 ... P80077 35793207
    474668 6h9e:B (1.82) BS02 FWK 5.4.99.1 GO:0003824 ... P80077 35793207
    474669 6h9e:C (1.82) BS01 B12 5.4.99.1 GO:0005515 ... P80078 35793207
    474670 6h9e:D (1.82) BS01 B12 5.4.99.1 GO:0003824 ... P80077 35793207
    474671 6h9e:D (1.82) BS02 FWK 5.4.99.1 GO:0003824 ... P80077 35793207
    474672 6h9f:A (2.1) BS01 B12 5.4.99.1 GO:0005515 ... P80078 35793207
    474673 6h9f:B (2.1) BS01 B12 5.4.99.1 GO:0003824 ... P80077 35793207
    474674 6h9f:B (2.1) BS02 8ZB 5.4.99.1 GO:0003824 ... P80077 35793207
    474675 6h9f:C (2.1) BS01 B12 5.4.99.1 GO:0005515 ... P80078 35793207
    474676 6h9f:D (2.1) BS01 B12 5.4.99.1 GO:0003824 ... P80077 35793207
    474677 6h9f:D (2.1) BS02 8ZB 5.4.99.1 GO:0003824 ... P80077 35793207
    474678 6h9g:A (11.0) BS01 peptide ? GO:0003723 ... P15682 32152587
    474679 6h9g:C (11.0) BS01 peptide ? GO:0003723 ... P15682 32152587
    474680 6h9h:A (1.75) BS01 rna ? GO:0046872 ... Q5NWP0 30397343
    474681 6h9h:A (1.75) BS02 MN ? GO:0046872 ... Q5NWP0 30397343
    474682 6h9h:B (1.75) BS01 rna ? GO:0046872 ... Q5NWP0 30397343
    474683 6h9h:B (1.75) BS02 MN ? GO:0046872 ... Q5NWP0 30397343
    474684 6h9i:A (2.29) BS01 rna ? GO:0046872 ... Q5NWP0 30397343
    474685 6h9i:A (2.29) BS02 rna ? GO:0046872 ... Q5NWP0 30397343
    474686 6h9i:B (2.29) BS01 rna ? GO:0046872 ... Q5NWP0 30397343
    474687 6h9i:B (2.29) BS02 MN ? GO:0046872 ... Q5NWP0 30397343
    474688 6h9j:A (1.83) BS01 peptide 1.14.11.30
    1.14.11.n4
    GO:0003714 ... Q9NWT6 N/A
    474689 6h9j:A (1.83) BS02 ZN 1.14.11.30
    1.14.11.n4
    GO:0003714 ... Q9NWT6 N/A
    474690 6h9n:A (2.6) BS01 peptide ? GO:0090529 ... P06136 30206170
    474691 6h9o:A (2.8) BS01 peptide ? GO:0090529 ... P06136 30206170
    474692 6h9o:C (2.8) BS01 peptide ? GO:0090529 ... P06136 30206170
    474693 6h9r:A (2.4) BS01 5V5 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q6YMS4 30602529
    474694 6h9r:A (2.4) BS02 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q6YMS4 30602529
    474695 6h9r:A (2.4) BS03 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q6YMS4 30602529
    474696 6h9s:A (1.9) BS01 NAD 1.1.1.27 GO:0003824 ... A9BGZ9 N/A
    474697 6h9s:B (1.9) BS01 NAD 1.1.1.27 GO:0003824 ... A9BGZ9 N/A
    474698 6h9v:A (1.52) BS01 MFU ? N/A B5BTR7 30899001
    474699 6h9v:A (1.52) BS02 MG ? N/A B5BTR7 30899001
    474700 6h9v:B (1.52) BS01 MFU ? N/A B5BTR7 30899001
    474701 6h9v:B (1.52) BS02 MG ? N/A B5BTR7 30899001
    474702 6h9x:A (2.1) BS01 SSA 6.1.1.11 GO:0000166 ... W9BNU9 31048140
    474703 6h9x:A (2.1) BS02 CA 6.1.1.11 GO:0000166 ... W9BNU9 31048140
    474704 6h9y:A (1.31) BS01 GAL ? GO:0019028 ... Q0PRF2 31226167
    474705 6ha0:A (1.85) BS01 GAL ? GO:0016020 ... A0A0S0VKY7 31226167
    474706 6ha1:0 (3.1) BS01 rna ? GO:0003735 ... O34687 30126986
    474707 6ha1:1 (3.1) BS01 rna ? GO:0003735 ... P56849 30126986
    474708 6ha1:2 (3.1) BS01 rna ? GO:0003735 ... P05647 30126986
    474709 6ha1:3 (3.1) BS01 rna ? GO:0003735 ... P55874 30126986
    474710 6ha1:4 (3.1) BS01 rna ? GO:0003735 ... P20278 30126986
    474711 6ha1:6 (3.1) BS01 rna ? GO:0003735 ... Q03223 30126986
    474712 6ha1:C (3.1) BS01 rna ? GO:0002181 ... P42919 30126986
    474713 6ha1:C (3.1) BS02 rna ? GO:0002181 ... P42919 30126986
    474714 6ha1:D (3.1) BS01 rna ? GO:0003735 ... P42920 30126986
    474715 6ha1:E (3.1) BS01 rna ? GO:0003735 ... P42921 30126986
    474716 6ha1:F (3.1) BS01 rna ? GO:0000049 ... P12877 30126986
    474717 6ha1:F (3.1) BS02 rna ? GO:0000049 ... P12877 30126986
    474718 6ha1:F (3.1) BS03 rna ? GO:0000049 ... P12877 30126986
    474719 6ha1:G (3.1) BS01 rna ? GO:0002181 ... P46898 30126986
    474720 6ha1:J (3.1) BS01 rna ? GO:0003729 ... P70974 30126986
    474721 6ha1:K (3.1) BS01 rna ? GO:0003735 ... P12875 30126986
    474722 6ha1:K (3.1) BS02 rna ? GO:0003735 ... P12875 30126986
    474723 6ha1:L (3.1) BS01 rna ? GO:0003735 ... P19946 30126986
    474724 6ha1:M (3.1) BS01 rna ? GO:0000049 ... P14577 30126986
    474725 6ha1:M (3.1) BS02 rna ? GO:0000049 ... P14577 30126986
    474726 6ha1:M (3.1) BS03 rna ? GO:0000049 ... P14577 30126986
    474727 6ha1:N (3.1) BS01 rna ? GO:0003735 ... P20277 30126986
    474728 6ha1:O (3.1) BS01 rna ? GO:0003735 ... P46899 30126986
    474729 6ha1:O (3.1) BS02 rna ? GO:0003735 ... P46899 30126986
    474730 6ha1:P (3.1) BS01 rna ? GO:0003735 ... O31742 30126986
    474731 6ha1:P (3.1) BS02 rna ? GO:0003735 ... O31742 30126986
    474732 6ha1:Q (3.1) BS01 rna ? GO:0000027 ... P55873 30126986
    474733 6ha1:R (3.1) BS01 rna ? GO:0003723 ... P26908 30126986
    474734 6ha1:S (3.1) BS01 rna ? GO:0003735 ... P42060 30126986
    474735 6ha1:T (3.1) BS01 rna ? GO:0003735 ... P42924 30126986
    474736 6ha1:U (3.1) BS01 rna ? GO:0003677 ... P0CI78 30126986
    474737 6ha1:W (3.1) BS01 rna ? GO:0003735 ... P05657 30126986
    474738 6ha1:W (3.1) BS02 rna ? GO:0003735 ... P05657 30126986
    474739 6ha1:W (3.1) BS03 rna ? GO:0003735 ... P05657 30126986
    474740 6ha1:X (3.1) BS01 rna ? GO:0003735 ... P37807 30126986
    474741 6ha1:Y (3.1) BS01 rna ? GO:0003735 ... P12873 30126986
    474742 6ha1:Z (3.1) BS01 rna ? GO:0003735 ... P19947 30126986
    474743 6ha1:Z (3.1) BS02 rna ? GO:0003735 ... P19947 30126986
    474744 6ha1:b (3.1) BS01 rna ? GO:0003735 ... P21464 30126986
    474745 6ha1:c (3.1) BS01 rna ? GO:0003676 ... P21465 30126986
    474746 6ha1:d (3.1) BS01 rna ? GO:0003723 ... P21466 30126986
    474747 6ha1:e (3.1) BS01 rna ? GO:0003723 ... P21467 30126986
    474748 6ha1:f (3.1) BS01 rna ? GO:0003735 ... P21468 30126986
    474749 6ha1:g (3.1) BS01 rna ? GO:0000028 ... P21469 30126986
    474750 6ha1:h (3.1) BS01 rna ? GO:0003735 ... P12879 30126986
    474751 6ha1:i (3.1) BS01 rna ? GO:0003723 ... P21470 30126986
    474752 6ha1:j (3.1) BS01 rna ? GO:0000049 ... P21471 30126986
    474753 6ha1:k (3.1) BS01 rna ? GO:0003735 ... P04969 30126986
    474754 6ha1:l (3.1) BS01 rna ? GO:0000049 ... P21472 30126986
    474755 6ha1:m (3.1) BS01 rna ? GO:0000049 ... P20282 30126986
    474756 6ha1:n (3.1) BS01 rna ? GO:0003735 ... P12878 30126986
    474757 6ha1:o (3.1) BS01 rna ? GO:0003735 ... P21473 30126986
    474758 6ha1:o (3.1) BS02 rna ? GO:0003735 ... P21473 30126986
    474759 6ha1:p (3.1) BS01 rna ? GO:0003735 ... P21474 30126986
    474760 6ha1:q (3.1) BS01 rna ? GO:0003735 ... P12874 30126986
    474761 6ha1:r (3.1) BS01 rna ? GO:0003735 ... P21475 30126986
    474762 6ha1:s (3.1) BS01 rna ? GO:0000028 ... P21476 30126986
    474763 6ha1:t (3.1) BS01 rna ? GO:0003723 ... P21477 30126986
    474764 6ha3:A (1.08) BS01 T6F 2.2.1.1 GO:0000287 ... P29401 31534226
    474765 6ha3:A (1.08) BS02 CA 2.2.1.1 GO:0000287 ... P29401 31534226
    474766 6ha3:A (1.08) BS03 MG 2.2.1.1 GO:0000287 ... P29401 31534226
    474767 6ha4:A (1.33) BS01 T3Y ? GO:0050832 ... B6HWK0 30867921 MOAD: Kd=107uM
    474768 6ha5:A (1.87) BS01 CU 3.2.1.4 GO:0003674 ... Q4WP32 30296642
    474769 6ha5:B (1.87) BS01 CU 3.2.1.4 GO:0003674 ... Q4WP32 30296642
    474770 6ha6:A (1.98) BS01 peptide 1.14.11.30
    1.14.11.n4
    GO:0003714 ... Q9NWT6 N/A
    474771 6ha6:A (1.98) BS02 ZN 1.14.11.30
    1.14.11.n4
    GO:0003714 ... Q9NWT6 N/A
    474772 6ha8:0 (3.5) BS01 rna ? GO:0003735 ... O34687 30126986
    474773 6ha8:1 (3.5) BS01 rna ? GO:0003735 ... P56849 30126986
    474774 6ha8:2 (3.5) BS01 rna ? GO:0003735 ... P05647 30126986
    474775 6ha8:3 (3.5) BS01 rna ? GO:0003735 ... P55874 30126986
    474776 6ha8:4 (3.5) BS01 rna ? GO:0003735 ... P20278 30126986
    474777 6ha8:6 (3.5) BS01 rna ? GO:0003735 ... Q03223 30126986
    474778 6ha8:8 (3.5) BS01 rna ? GO:0000049 ... Q06797 30126986
    474779 6ha8:C (3.5) BS01 rna ? GO:0002181 ... P42919 30126986
    474780 6ha8:D (3.5) BS01 rna ? GO:0003735 ... P42920 30126986
    474781 6ha8:E (3.5) BS01 rna ? GO:0003735 ... P42921 30126986
    474782 6ha8:F (3.5) BS01 rna ? GO:0000049 ... P12877 30126986
    474783 6ha8:F (3.5) BS02 rna ? GO:0000049 ... P12877 30126986
    474784 6ha8:G (3.5) BS01 rna ? GO:0002181 ... P46898 30126986
    474785 6ha8:J (3.5) BS01 rna ? GO:0003729 ... P70974 30126986
    474786 6ha8:K (3.5) BS01 rna ? GO:0003735 ... P12875 30126986
    474787 6ha8:K (3.5) BS02 rna ? GO:0003735 ... P12875 30126986
    474788 6ha8:L (3.5) BS01 rna ? GO:0003735 ... P19946 30126986
    474789 6ha8:M (3.5) BS01 rna ? GO:0000049 ... P14577 30126986
    474790 6ha8:M (3.5) BS02 rna ? GO:0000049 ... P14577 30126986
    474791 6ha8:N (3.5) BS01 rna ? GO:0003735 ... P20277 30126986
    474792 6ha8:O (3.5) BS01 rna ? GO:0003735 ... P46899 30126986
    474793 6ha8:O (3.5) BS02 rna ? GO:0003735 ... P46899 30126986
    474794 6ha8:P (3.5) BS01 rna ? GO:0003735 ... O31742 30126986
    474795 6ha8:P (3.5) BS02 rna ? GO:0003735 ... O31742 30126986
    474796 6ha8:Q (3.5) BS01 rna ? GO:0000027 ... P55873 30126986
    474797 6ha8:R (3.5) BS01 rna ? GO:0003723 ... P26908 30126986
    474798 6ha8:S (3.5) BS01 rna ? GO:0003735 ... P42060 30126986
    474799 6ha8:T (3.5) BS01 rna ? GO:0003735 ... P42924 30126986
    474800 6ha8:U (3.5) BS01 rna ? GO:0003677 ... P0CI78 30126986

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).