SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 2365 2366 2367 2368 2369 2370 2371 2372 2373 2374 2375 2376 2377 2378 2379 2380 2381 2382 2383 2384 2385 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    474801 6ha8:V (3.5) BS01 rna ? GO:0005524 ... P39115 30126986
    474802 6ha8:V (3.5) BS02 rna ? GO:0005524 ... P39115 30126986
    474803 6ha8:V (3.5) BS03 rna ? GO:0005524 ... P39115 30126986
    474804 6ha8:V (3.5) BS04 ATP ? GO:0005524 ... P39115 30126986
    474805 6ha8:V (3.5) BS05 ATP ? GO:0005524 ... P39115 30126986
    474806 6ha8:W (3.5) BS01 rna ? GO:0003735 ... P05657 30126986
    474807 6ha8:W (3.5) BS02 rna ? GO:0003735 ... P05657 30126986
    474808 6ha8:X (3.5) BS01 rna ? GO:0003735 ... P37807 30126986
    474809 6ha8:Y (3.5) BS01 rna ? GO:0003735 ... P12873 30126986
    474810 6ha8:Z (3.5) BS01 rna ? GO:0003735 ... P19947 30126986
    474811 6ha8:b (3.5) BS01 rna ? GO:0003735 ... P21464 30126986
    474812 6ha8:c (3.5) BS01 rna ? GO:0003676 ... P21465 30126986
    474813 6ha8:d (3.5) BS01 rna ? GO:0003723 ... P21466 30126986
    474814 6ha8:e (3.5) BS01 rna ? GO:0003723 ... P21467 30126986
    474815 6ha8:f (3.5) BS01 rna ? GO:0003735 ... P21468 30126986
    474816 6ha8:g (3.5) BS01 rna ? GO:0000028 ... P21469 30126986
    474817 6ha8:h (3.5) BS01 rna ? GO:0003735 ... P12879 30126986
    474818 6ha8:i (3.5) BS01 rna ? GO:0003723 ... P21470 30126986
    474819 6ha8:j (3.5) BS01 rna ? GO:0000049 ... P21471 30126986
    474820 6ha8:k (3.5) BS01 rna ? GO:0003735 ... P04969 30126986
    474821 6ha8:l (3.5) BS01 rna ? GO:0000049 ... P21472 30126986
    474822 6ha8:m (3.5) BS01 rna ? GO:0000049 ... P20282 30126986
    474823 6ha8:n (3.5) BS01 rna ? GO:0003735 ... P12878 30126986
    474824 6ha8:o (3.5) BS01 rna ? GO:0003735 ... P21473 30126986
    474825 6ha8:o (3.5) BS02 rna ? GO:0003735 ... P21473 30126986
    474826 6ha8:p (3.5) BS01 rna ? GO:0003735 ... P21474 30126986
    474827 6ha8:q (3.5) BS01 rna ? GO:0003735 ... P12874 30126986
    474828 6ha8:r (3.5) BS01 rna ? GO:0003735 ... P21475 30126986
    474829 6ha8:s (3.5) BS01 rna ? GO:0000028 ... P21476 30126986
    474830 6ha8:t (3.5) BS01 rna ? GO:0003723 ... P21477 30126986
    474831 6ha9:A (2.0) BS01 NFG 3.2.1.4 GO:0000272 ... B3PD52 30387796
    474832 6ha9:A (2.0) BS02 BGC 3.2.1.4 GO:0000272 ... B3PD52 30387796
    474833 6ha9:A (2.0) BS03 BGC 3.2.1.4 GO:0000272 ... B3PD52 30387796
    474834 6ha9:B (2.0) BS01 NFG 3.2.1.4 GO:0000272 ... B3PD52 30387796
    474835 6ha9:B (2.0) BS02 BGC 3.2.1.4 GO:0000272 ... B3PD52 30387796
    474836 6ha9:B (2.0) BS03 BGC 3.2.1.4 GO:0000272 ... B3PD52 30387796
    474837 6haa:A (1.7) BS01 G2F 3.2.1.4 GO:0000272 ... B3PD52 30387796
    474838 6haa:A (1.7) BS02 BGC 3.2.1.4 GO:0000272 ... B3PD52 30387796
    474839 6haa:A (1.7) BS03 BGC 3.2.1.4 GO:0000272 ... B3PD52 30387796
    474840 6haa:B (1.7) BS01 G2F 3.2.1.4 GO:0000272 ... B3PD52 30387796
    474841 6haa:B (1.7) BS02 BGC 3.2.1.4 GO:0000272 ... B3PD52 30387796
    474842 6haa:B (1.7) BS03 BGC 3.2.1.4 GO:0000272 ... B3PD52 30387796
    474843 6hac:A (2.3) BS01 FE9 1.12.98.2 GO:0004735 ... A6UVT1 N/A
    474844 6had:A (1.04) BS01 CA 2.2.1.1 GO:0000287 ... P29401 31534226
    474845 6had:A (1.04) BS02 MG 2.2.1.1 GO:0000287 ... P29401 31534226
    474846 6had:A (1.04) BS03 TPP 2.2.1.1 GO:0000287 ... P29401 31534226
    474847 6hae:A (1.85) BS01 E4M 1.12.98.2 GO:0004735 ... A6UVT1 N/A
    474848 6hae:A (1.85) BS02 FE9 1.12.98.2 GO:0004735 ... A6UVT1 N/A
    474849 6hae:A (1.85) BS03 E4M 1.12.98.2 GO:0004735 ... A6UVT1 N/A
    474850 6hae:K (1.85) BS01 E4M 1.12.98.2 GO:0004735 ... A6UVT1 N/A
    474851 6hae:K (1.85) BS02 E4M 1.12.98.2 GO:0004735 ... A6UVT1 N/A
    474852 6hae:K (1.85) BS03 FE9 1.12.98.2 GO:0004735 ... A6UVT1 N/A
    474853 6haf:A (1.3) BS01 FAD 1.2.3.3 GO:0000287 ... P37063 31534226
    474854 6haf:A (1.3) BS02 MG 1.2.3.3 GO:0000287 ... P37063 31534226
    474855 6haf:A (1.3) BS03 TPP 1.2.3.3 GO:0000287 ... P37063 31534226
    474856 6haf:B (1.3) BS01 FAD 1.2.3.3 GO:0000287 ... P37063 31534226
    474857 6haf:B (1.3) BS02 MG 1.2.3.3 GO:0000287 ... P37063 31534226
    474858 6haf:B (1.3) BS03 TPP 1.2.3.3 GO:0000287 ... P37063 31534226
    474859 6hah:A (1.45) BS01 FWQ ? GO:0050832 ... B6HWK0 30867921 MOAD: Kd=15.4uM
    474860 6hai:A (2.2) BS01 FWW ? N/A Q8KRS7 30422653
    474861 6hai:B (2.2) BS01 FWW ? N/A Q8KRS7 30422653
    474862 6haj:A (1.5) BS01 EVB ? GO:0050832 ... B6HWK0 30867921
    474863 6haj:B (1.5) BS01 EVB ? GO:0050832 ... B6HWK0 30867921 MOAD: Kd=10.6uM
    474864 6hak:A (3.95) BS01 rna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 30902895
    474865 6hak:A (3.95) BS02 rna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 30902895
    474866 6hak:A (3.95) BS03 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 30902895
    474867 6hak:B (3.95) BS01 GLC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003964 ... P03366 30902895
    474868 6hak:B (3.95) BS02 FRU 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003964 ... P03366 30902895
    474869 6hak:C (3.95) BS01 rna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 30902895
    474870 6hak:C (3.95) BS02 rna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 30902895
    474871 6hal:A (2.2) BS01 HEM ? GO:0004601 ... P69905 30289410
    474872 6hal:B (2.2) BS01 HEM ? GO:0004601 ... P68871 30289410
    474873 6hal:C (2.2) BS01 HEM ? GO:0004601 ... P69905 30289410
    474874 6hal:D (2.2) BS01 HEM ? GO:0004601 ... P68871 30289410
    474875 6ham:A (2.55) BS01 AP5 2.7.4.3 GO:0000287 ... P69441 30088929
    474876 6hap:A (2.7) BS01 AP5 2.7.4.3 GO:0000287 ... P69441 30088929
    474877 6haq:A (1.37) BS01 CU 3.2.1.4 GO:0003674 ... Q4WP32 30296642
    474878 6haq:B (1.37) BS01 CU 3.2.1.4 GO:0003674 ... Q4WP32 30296642
    474879 6har:A (1.497) BS01 CA ? GO:0004252 ... Q8N2U3 30700553
    474880 6hat:A (1.856) BS01 ZN ? GO:0006355 ... P13199 30462297
    474881 6hat:B (1.856) BS01 ZN ? GO:0006355 ... P13199 30462297
    474882 6hau:A (1.86) BS01 rna ? GO:0006355 ... P13199 30462297
    474883 6hau:A (1.86) BS02 ZN ? GO:0006355 ... P13199 30462297
    474884 6hau:B (1.86) BS01 rna ? GO:0006355 ... P13199 30462297
    474885 6hau:B (1.86) BS02 ZN ? GO:0006355 ... P13199 30462297
    474886 6hav:A (1.06) BS01 FE9 1.12.98.2 GO:0004735 ... A6UVT1 N/A
    474887 6hav:A (1.06) BS02 E4M 1.12.98.2 GO:0004735 ... A6UVT1 N/A
    474888 6haw:C (3.45) BS01 HEM ? GO:0005739 ... P00157 30613327
    474889 6haw:C (3.45) BS02 HEM ? GO:0005739 ... P00157 30613327
    474890 6haw:C (3.45) BS03 FX2 ? GO:0005739 ... P00157 30613327
    474891 6haw:D (3.45) BS01 HEC 7.1.1.8 GO:0009055 ... P00125 30613327
    474892 6haw:E (3.45) BS01 FES 7.1.1.8 GO:0008121 ... P13272 30613327
    474893 6hax:A (2.35) BS01 FWZ 3.6.4.- GO:0006338 ... P51531 31178587
    474894 6hax:B (2.35) BS01 FWZ ? N/A P40337 31178587
    474895 6hax:E (2.35) BS01 FWZ 3.6.4.- GO:0006338 ... P51531 31178587
    474896 6hax:F (2.35) BS01 FWZ ? N/A P40337 31178587
    474897 6hay:A (2.24) BS01 FX8 3.6.4.- GO:0006338 ... P51531 31178587
    474898 6hay:B (2.24) BS01 FX8 ? N/A P40337 31178587
    474899 6hay:E (2.24) BS01 FX8 3.6.4.- GO:0006338 ... P51531 31178587
    474900 6hay:F (2.24) BS01 FX8 ? N/A P40337 31178587
    474901 6haz:A (1.31) BS01 FX5 3.6.4.- GO:0006338 ... P51531 31178587
    474902 6haz:B (1.31) BS01 FX5 3.6.4.- GO:0006338 ... P51531 31178587
    474903 6hb0:A (1.9) BS01 ZN ? GO:0030246 ... A0QT50 31006617
    474904 6hb0:A (1.9) BS02 ZN ? GO:0030246 ... A0QT50 31006617
    474905 6hb0:A (1.9) BS03 ZN ? GO:0030246 ... A0QT50 31006617
    474906 6hb0:A (1.9) BS04 ZN ? GO:0030246 ... A0QT50 31006617
    474907 6hb0:A (1.9) BS05 ZN ? GO:0030246 ... A0QT50 31006617
    474908 6hb0:A (1.9) BS06 ZN ? GO:0030246 ... A0QT50 31006617
    474909 6hb0:A (1.9) BS07 ZN ? GO:0030246 ... A0QT50 31006617
    474910 6hb0:B (1.9) BS01 ZN ? GO:0030246 ... A0QT50 31006617
    474911 6hb0:B (1.9) BS02 ZN ? GO:0030246 ... A0QT50 31006617
    474912 6hb0:B (1.9) BS03 ZN ? GO:0030246 ... A0QT50 31006617
    474913 6hb0:B (1.9) BS04 ZN ? GO:0030246 ... A0QT50 31006617
    474914 6hb0:B (1.9) BS05 ZN ? GO:0030246 ... A0QT50 31006617
    474915 6hb0:B (1.9) BS06 ZN ? GO:0030246 ... A0QT50 31006617
    474916 6hb0:B (1.9) BS07 ZN ? GO:0030246 ... A0QT50 31006617
    474917 6hb4:A (3.05) BS01 dna ? N/A Q00059 31114891
    474918 6hb4:A (3.05) BS02 dna ? N/A Q00059 31114891
    474919 6hb4:A (3.05) BS03 dna ? N/A Q00059 31114891
    474920 6hb4:D (3.05) BS01 dna ? N/A Q00059 31114891
    474921 6hb4:D (3.05) BS02 dna ? N/A Q00059 31114891
    474922 6hb4:D (3.05) BS03 dna ? N/A Q00059 31114891
    474923 6hb4:G (3.05) BS01 dna ? N/A Q00059 31114891
    474924 6hb4:G (3.05) BS02 dna ? N/A Q00059 31114891
    474925 6hb4:G (3.05) BS03 dna ? N/A Q00059 31114891
    474926 6hb4:J (3.05) BS01 dna ? N/A Q00059 31114891
    474927 6hb4:J (3.05) BS02 dna ? N/A Q00059 31114891
    474928 6hb4:J (3.05) BS03 dna ? N/A Q00059 31114891
    474929 6hb5:A (1.88) BS01 YSC 6.1.1.1 GO:0000166 ... P0AGJ9 30995568 BindingDB: Ki=1484nM
    474930 6hb5:B (1.88) BS01 YSC 6.1.1.1 GO:0000166 ... P0AGJ9 30995568 BindingDB: Ki=1484nM
    474931 6hb6:A (1.92) BS01 YSU 6.1.1.1 GO:0000166 ... P0AGJ9 30995568 BindingDB: Ki=43nM
    474932 6hb6:B (1.92) BS01 YSU 6.1.1.1 GO:0000166 ... P0AGJ9 30995568 BindingDB: Ki=43nM
    474933 6hb7:A (1.9) BS01 Y3U 6.1.1.1 GO:0000166 ... P0AGJ9 30995568 BindingDB: Ki=149nM
    474934 6hb7:B (1.9) BS01 Y3U 6.1.1.1 GO:0000166 ... P0AGJ9 30995568 BindingDB: Ki=149nM
    474935 6hbd:A (2.44) BS01 ZN ? GO:0030246 ... A0QT50 31006617
    474936 6hbd:A (2.44) BS02 ZN ? GO:0030246 ... A0QT50 31006617
    474937 6hbd:A (2.44) BS03 ZN ? GO:0030246 ... A0QT50 31006617
    474938 6hbd:A (2.44) BS04 ZN ? GO:0030246 ... A0QT50 31006617
    474939 6hbd:A (2.44) BS05 ZN ? GO:0030246 ... A0QT50 31006617
    474940 6hbd:A (2.44) BS06 ZN ? GO:0030246 ... A0QT50 31006617
    474941 6hbd:A (2.44) BS07 GZL ? GO:0030246 ... A0QT50 31006617
    474942 6hbd:B (2.44) BS01 ZN ? GO:0030246 ... A0QT50 31006617
    474943 6hbd:B (2.44) BS02 ZN ? GO:0030246 ... A0QT50 31006617
    474944 6hbd:B (2.44) BS03 ZN ? GO:0030246 ... A0QT50 31006617
    474945 6hbd:B (2.44) BS04 ZN ? GO:0030246 ... A0QT50 31006617
    474946 6hbd:B (2.44) BS05 GZL ? GO:0030246 ... A0QT50 31006617
    474947 6hbe:A (1.63) BS01 CU 1.7.2.1 GO:0005507 ... E8PLV7 30867922
    474948 6hbe:A (1.63) BS02 CU 1.7.2.1 GO:0005507 ... E8PLV7 30867922
    474949 6hbe:A (1.63) BS03 CU 1.7.2.1 GO:0005507 ... E8PLV7 30867922
    474950 6hbe:A (1.63) BS04 CA 1.7.2.1 GO:0005507 ... E8PLV7 30867922
    474951 6hbe:B (1.63) BS01 CU 1.7.2.1 GO:0005507 ... E8PLV7 30867922
    474952 6hbe:B (1.63) BS02 CU 1.7.2.1 GO:0005507 ... E8PLV7 30867922
    474953 6hbe:B (1.63) BS03 CU 1.7.2.1 GO:0005507 ... E8PLV7 30867922
    474954 6hbe:B (1.63) BS04 CA 1.7.2.1 GO:0005507 ... E8PLV7 30867922
    474955 6hbe:C (1.63) BS01 CU 1.7.2.1 GO:0005507 ... E8PLV7 30867922
    474956 6hbe:C (1.63) BS02 CU 1.7.2.1 GO:0005507 ... E8PLV7 30867922
    474957 6hbe:C (1.63) BS03 CU 1.7.2.1 GO:0005507 ... E8PLV7 30867922
    474958 6hbe:C (1.63) BS04 CA 1.7.2.1 GO:0005507 ... E8PLV7 30867922
    474959 6hbi:A (1.8) BS01 HEM ? GO:0005344 ... P02213 9826511
    474960 6hbi:A (1.8) BS02 HEM ? GO:0005344 ... P02213 9826511
    474961 6hbi:B (1.8) BS01 HEM ? GO:0005344 ... P02213 9826511
    474962 6hbi:B (1.8) BS02 HEM ? GO:0005344 ... P02213 9826511
    474963 6hbm:A (2.76) BS01 ZN ? GO:0030246 ... A0QT50 31006617
    474964 6hbm:A (2.76) BS02 ZN ? GO:0030246 ... A0QT50 31006617
    474965 6hbm:A (2.76) BS03 ZN ? GO:0030246 ... A0QT50 31006617
    474966 6hbm:A (2.76) BS04 ZN ? GO:0030246 ... A0QT50 31006617
    474967 6hbm:A (2.76) BS05 ZN ? GO:0030246 ... A0QT50 31006617
    474968 6hbm:A (2.76) BS06 AHR ? GO:0030246 ... A0QT50 31006617
    474969 6hbm:B (2.76) BS01 ZN ? GO:0030246 ... A0QT50 31006617
    474970 6hbm:B (2.76) BS02 ZN ? GO:0030246 ... A0QT50 31006617
    474971 6hbm:B (2.76) BS03 ZN ? GO:0030246 ... A0QT50 31006617
    474972 6hbm:B (2.76) BS04 AHR ? GO:0030246 ... A0QT50 31006617
    474973 6hbn:A (1.59) BS01 FXB 2.7.11.1 GO:0004672 ... P68400 31559376
    474974 6hbn:B (1.59) BS01 FXB 2.7.11.1 GO:0004672 ... P68400 31559376
    474975 6hbs:A (1.65) BS01 PLP 2.6.1.- GO:0005737 ... D2D3B2 N/A
    474976 6hbs:A (1.65) BS02 MG 2.6.1.- GO:0005737 ... D2D3B2 N/A
    474977 6hbs:A (1.65) BS03 PLP 2.6.1.- GO:0005737 ... D2D3B2 N/A
    474978 6hbs:B (1.65) BS01 PLP 2.6.1.- GO:0005737 ... D2D3B2 N/A
    474979 6hbs:B (1.65) BS02 PLP 2.6.1.- GO:0005737 ... D2D3B2 N/A
    474980 6hbs:B (1.65) BS03 MG 2.6.1.- GO:0005737 ... D2D3B2 N/A
    474981 6hbu:A (3.09) BS01 ATP 7.6.2.2 GO:0005515 ... Q9UNQ0 30405239
    474982 6hbu:A (3.09) BS02 MG 7.6.2.2 GO:0005515 ... Q9UNQ0 30405239
    474983 6hbu:A (3.09) BS03 ATP 7.6.2.2 GO:0005515 ... Q9UNQ0 30405239
    474984 6hbu:B (3.09) BS01 ATP 7.6.2.2 GO:0005515 ... Q9UNQ0 30405239
    474985 6hbu:B (3.09) BS02 ATP 7.6.2.2 GO:0005515 ... Q9UNQ0 30405239
    474986 6hbu:B (3.09) BS03 MG 7.6.2.2 GO:0005515 ... Q9UNQ0 30405239
    474987 6hbv:A (1.65) BS01 PLP 2.6.1.- GO:0005737 ... D2D3B2 N/A
    474988 6hbv:A (1.65) BS02 PMP 2.6.1.- GO:0005737 ... D2D3B2 N/A
    474989 6hbv:A (1.65) BS03 MG 2.6.1.- GO:0005737 ... D2D3B2 N/A
    474990 6hbv:A (1.65) BS04 PLP 2.6.1.- GO:0005737 ... D2D3B2 N/A
    474991 6hbv:A (1.65) BS05 PMP 2.6.1.- GO:0005737 ... D2D3B2 N/A
    474992 6hbv:B (1.65) BS01 PLP 2.6.1.- GO:0005737 ... D2D3B2 N/A
    474993 6hbv:B (1.65) BS02 PMP 2.6.1.- GO:0005737 ... D2D3B2 N/A
    474994 6hbv:B (1.65) BS03 PLP 2.6.1.- GO:0005737 ... D2D3B2 N/A
    474995 6hbv:B (1.65) BS04 PMP 2.6.1.- GO:0005737 ... D2D3B2 N/A
    474996 6hbw:A (2.0) BS01 HEM ? GO:0004601 ... P69905 9830011
    474997 6hbw:B (2.0) BS01 HEM ? GO:0004601 ... P68871 9830011
    474998 6hbw:C (2.0) BS01 HEM ? GO:0004601 ... P69905 9830011
    474999 6hbw:D (2.0) BS01 HEM ? GO:0004601 ... P68871 9830011
    475000 6hby:A (1.95) BS01 peptide ? GO:0006955 ... P01903 31619516

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).