SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    475401 6hcp:C (1.83) BS02 C8E ? GO:0006826 ... Q76HJ9 30558715
    475402 6hcp:C (1.83) BS03 C8E ? GO:0006826 ... Q76HJ9 30558715
    475403 6hcp:C (1.83) BS04 C8E ? GO:0006826 ... Q76HJ9 30558715
    475404 6hcp:C (1.83) BS05 C8E ? GO:0006826 ... Q76HJ9 30558715
    475405 6hcp:C (1.83) BS06 C8E ? GO:0006826 ... Q76HJ9 30558715
    475406 6hcp:C (1.83) BS07 C8E ? GO:0006826 ... Q76HJ9 30558715
    475407 6hcq:A3 (6.5) BS01 rna ? GO:0002181 ... G1TT27 30293783
    475408 6hcq:A3 (6.5) BS02 rna ? GO:0002181 ... G1TT27 30293783
    475409 6hcq:B2 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475410 6hcq:B3 (6.5) BS01 rna ? GO:0003723 ... G1TL06 30293783
    475411 6hcq:C2 (6.5) BS01 rna ? GO:0003735 ... G1SS70 30293783
    475412 6hcq:C2 (6.5) BS02 rna ? GO:0003735 ... G1SS70 30293783
    475413 6hcq:C3 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475414 6hcq:C3 (6.5) BS02 rna N/A GO:0003735 ... N/A 30293783
    475415 6hcq:D2 (6.5) BS01 rna N/A GO:0003723 ... N/A 30293783
    475416 6hcq:D3 (6.5) BS01 rna ? GO:0000027 ... P19949 30293783
    475417 6hcq:D3 (6.5) BS02 rna ? GO:0000027 ... P19949 30293783
    475418 6hcq:E2 (6.5) BS01 rna 4.2.99.18 GO:0003677 ... G1TNM3 30293783
    475419 6hcq:E2 (6.5) BS02 rna 4.2.99.18 GO:0003677 ... G1TNM3 30293783
    475420 6hcq:E3 (6.5) BS01 rna ? GO:0000027 ... G1SKF7 30293783
    475421 6hcq:F2 (6.5) BS01 rna N/A GO:0003723 ... N/A 30293783
    475422 6hcq:F3 (6.5) BS01 rna ? GO:0000463 ... G1TUB1 30293783
    475423 6hcq:F3 (6.5) BS02 rna ? GO:0000463 ... G1TUB1 30293783
    475424 6hcq:G2 (6.5) BS01 rna ? GO:0003723 ... G1TFM5 30293783
    475425 6hcq:G2 (6.5) BS02 MG ? GO:0003723 ... G1TFM5 30293783
    475426 6hcq:G3 (6.5) BS01 rna N/A GO:0003723 ... N/A 30293783
    475427 6hcq:G3 (6.5) BS02 rna N/A GO:0003723 ... N/A 30293783
    475428 6hcq:H2 (6.5) BS01 rna ? GO:0003735 ... G1TM55 30293783
    475429 6hcq:H3 (6.5) BS01 rna ? GO:0002181 ... G1SWI6 30293783
    475430 6hcq:I2 (6.5) BS01 rna ? GO:0003735 ... G1SVB0 30293783
    475431 6hcq:I3 (6.5) BS01 rna ? GO:0003735 ... B7NZQ2 30293783
    475432 6hcq:I3 (6.5) BS02 rna ? GO:0003735 ... B7NZQ2 30293783
    475433 6hcq:I3 (6.5) BS03 rna ? GO:0003735 ... B7NZQ2 30293783
    475434 6hcq:J2 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475435 6hcq:J3 (6.5) BS01 rna ? GO:0003735 ... G1TUB8 30293783
    475436 6hcq:J3 (6.5) BS02 rna ? GO:0003735 ... G1TUB8 30293783
    475437 6hcq:K2 (6.5) BS01 rna ? GO:0003723 ... B7NZS8 30293783
    475438 6hcq:L2 (6.5) BS01 rna ? GO:0003723 ... G1TPV3 30293783
    475439 6hcq:L3 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475440 6hcq:M2 (6.5) BS01 rna ? GO:0003735 ... G1TRM4 30293783
    475441 6hcq:M3 (6.5) BS01 rna ? GO:0003723 ... G1SZ12 30293783
    475442 6hcq:N2 (6.5) BS01 rna ? GO:0003735 ... G1SFR8 30293783
    475443 6hcq:N3 (6.5) BS01 rna ? GO:0002181 ... G1T0C1 30293783
    475444 6hcq:N3 (6.5) BS02 rna ? GO:0002181 ... G1T0C1 30293783
    475445 6hcq:O2 (6.5) BS01 rna ? GO:0003735 ... G1SP51 30293783
    475446 6hcq:O3 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475447 6hcq:P2 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475448 6hcq:P3 (6.5) BS01 rna ? GO:0002181 ... G1SCJ6 30293783
    475449 6hcq:P3 (6.5) BS02 rna ? GO:0002181 ... G1SCJ6 30293783
    475450 6hcq:Q2 (6.5) BS01 rna ? GO:0000028 ... G1U0Q2 30293783
    475451 6hcq:Q3 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475452 6hcq:R2 (6.5) BS01 rna ? GO:0000462 ... G1SGX4 30293783
    475453 6hcq:R3 (6.5) BS01 rna N/A GO:0003723 ... N/A 30293783
    475454 6hcq:R3 (6.5) BS02 rna N/A GO:0003723 ... N/A 30293783
    475455 6hcq:S2 (6.5) BS01 rna ? GO:0003735 ... G1TU13 30293783
    475456 6hcq:S3 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475457 6hcq:S3 (6.5) BS02 rna N/A GO:0003735 ... N/A 30293783
    475458 6hcq:T2 (6.5) BS01 rna ? GO:0003676 ... G1TPG3 30293783
    475459 6hcq:T3 (6.5) BS01 rna ? GO:0003735 ... G1SHQ2 30293783
    475460 6hcq:T3 (6.5) BS02 rna ? GO:0003735 ... G1SHQ2 30293783
    475461 6hcq:U2 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475462 6hcq:U3 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475463 6hcq:V2 (6.5) BS01 rna ? GO:0003723 ... G1SIZ2 30293783
    475464 6hcq:V3 (6.5) BS01 rna ? GO:0003735 ... G1T6D1 30293783
    475465 6hcq:V3 (6.5) BS02 rna ? GO:0003735 ... G1T6D1 30293783
    475466 6hcq:X2 (6.5) BS01 rna ? GO:0003735 ... G1TG89 30293783
    475467 6hcq:X3 (6.5) BS01 rna ? GO:0003735 ... G1SE76 30293783
    475468 6hcq:X3 (6.5) BS02 rna ? GO:0003735 ... G1SE76 30293783
    475469 6hcq:Y2 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475470 6hcq:Y3 (6.5) BS01 rna ? GO:0003723 ... G1SQH0 30293783
    475471 6hcq:Y3 (6.5) BS02 rna ? GO:0003723 ... G1SQH0 30293783
    475472 6hcq:Z2 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475473 6hcq:Z3 (6.5) BS01 rna ? GO:0003735 ... G1TXF6 30293783
    475474 6hcq:a3 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475475 6hcq:b2 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475476 6hcq:b2 (6.5) BS02 rna N/A GO:0003735 ... N/A 30293783
    475477 6hcq:b2 (6.5) BS03 ZN N/A GO:0003735 ... N/A 30293783
    475478 6hcq:b3 (6.5) BS01 rna ? GO:0002181 ... G1SGR6 30293783
    475479 6hcq:c2 (6.5) BS01 rna ? GO:0003735 ... G1TZ76 30293783
    475480 6hcq:c3 (6.5) BS01 rna ? GO:0002181 ... G1TDL2 30293783
    475481 6hcq:d2 (6.5) BS01 rna ? GO:0000028 ... G1TIB4 30293783
    475482 6hcq:d2 (6.5) BS02 rna ? GO:0000028 ... G1TIB4 30293783
    475483 6hcq:d3 (6.5) BS01 rna ? GO:0002181 ... G1SHG0 30293783
    475484 6hcq:e2 (6.5) BS01 rna ? GO:0002181 ... G1U7M4 30293783
    475485 6hcq:e2 (6.5) BS02 ZN ? GO:0002181 ... G1U7M4 30293783
    475486 6hcq:e3 (6.5) BS01 rna ? GO:0003735 ... G1TUN8 30293783
    475487 6hcq:f2 (6.5) BS01 rna ? GO:0003735 ... G1T8A2 30293783
    475488 6hcq:f3 (6.5) BS01 rna ? GO:0000049 ... G1SF08 30293783
    475489 6hcq:g2 (6.5) BS01 rna ? GO:0003735 ... G1SK22 30293783
    475490 6hcq:g2 (6.5) BS02 ZN ? GO:0003735 ... G1SK22 30293783
    475491 6hcq:g3 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475492 6hcq:h2 (6.5) BS01 rna ? GO:0001891 ... G1SJB4 30293783
    475493 6hcq:h3 (6.5) BS01 rna ? GO:0000463 ... G1SIT5 30293783
    475494 6hcq:h3 (6.5) BS02 rna ? GO:0000463 ... G1SIT5 30293783
    475495 6hcq:i3 (6.5) BS01 rna ? GO:0003735 ... G1TTQ5 30293783
    475496 6hcq:j3 (6.5) BS01 rna ? GO:0003723 ... U3KPD5 30293783
    475497 6hcq:j3 (6.5) BS02 rna ? GO:0003723 ... U3KPD5 30293783
    475498 6hcq:j3 (6.5) BS03 ZN ? GO:0003723 ... U3KPD5 30293783
    475499 6hcq:k3 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475500 6hcq:l3 (6.5) BS01 rna ? GO:0003735 ... G1TTN1 30293783
    475501 6hcq:l3 (6.5) BS02 rna ? GO:0003735 ... G1TTN1 30293783
    475502 6hcq:m3 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475503 6hcq:m3 (6.5) BS02 ZN N/A GO:0003735 ... N/A 30293783
    475504 6hcq:o3 (6.5) BS01 rna N/A GO:0003735 ... N/A 30293783
    475505 6hcq:o3 (6.5) BS02 rna N/A GO:0003735 ... N/A 30293783
    475506 6hcq:o3 (6.5) BS03 ZN N/A GO:0003735 ... N/A 30293783
    475507 6hcq:p3 (6.5) BS01 rna ? GO:0003735 ... G1SY53 30293783
    475508 6hcq:p3 (6.5) BS02 rna ? GO:0003735 ... G1SY53 30293783
    475509 6hcq:p3 (6.5) BS03 ZN ? GO:0003735 ... G1SY53 30293783
    475510 6hcq:r3 (6.5) BS01 rna ? GO:0003735 ... G1U7L1 30293783
    475511 6hcq:t3 (6.5) BS01 rna N/A GO:0042254 ... N/A 30293783
    475512 6hcq:u3 (6.5) BS01 rna ? GO:0003723 ... G1SMR7 30293783
    475513 6hcq:w3 (6.5) BS01 rna ? GO:0003723 ... G1SKZ8 30293783
    475514 6hcs:A (2.0) BS01 peptide ? GO:0000086 ... P0DP23 30474048
    475515 6hcs:A (2.0) BS02 CA ? GO:0000086 ... P0DP23 30474048
    475516 6hcs:A (2.0) BS03 CA ? GO:0000086 ... P0DP23 30474048
    475517 6hcs:A (2.0) BS04 CA ? GO:0000086 ... P0DP23 30474048
    475518 6hcs:A (2.0) BS05 CA ? GO:0000086 ... P0DP23 30474048
    475519 6hcs:C (2.0) BS01 peptide ? GO:0000086 ... P0DP23 30474048
    475520 6hcs:C (2.0) BS02 CA ? GO:0000086 ... P0DP23 30474048
    475521 6hcs:C (2.0) BS03 CA ? GO:0000086 ... P0DP23 30474048
    475522 6hcs:C (2.0) BS04 CA ? GO:0000086 ... P0DP23 30474048
    475523 6hcs:C (2.0) BS05 CA ? GO:0000086 ... P0DP23 30474048
    475524 6hcs:E (2.0) BS01 peptide ? GO:0000086 ... P0DP23 30474048
    475525 6hcs:E (2.0) BS02 CA ? GO:0000086 ... P0DP23 30474048
    475526 6hcs:E (2.0) BS03 CA ? GO:0000086 ... P0DP23 30474048
    475527 6hcs:E (2.0) BS04 CA ? GO:0000086 ... P0DP23 30474048
    475528 6hcs:E (2.0) BS05 CA ? GO:0000086 ... P0DP23 30474048
    475529 6hcs:G (2.0) BS01 peptide ? GO:0000086 ... P0DP23 30474048
    475530 6hcs:G (2.0) BS02 CA ? GO:0000086 ... P0DP23 30474048
    475531 6hcs:G (2.0) BS03 CA ? GO:0000086 ... P0DP23 30474048
    475532 6hcs:G (2.0) BS04 CA ? GO:0000086 ... P0DP23 30474048
    475533 6hcs:G (2.0) BS05 CA ? GO:0000086 ... P0DP23 30474048
    475534 6hct:C (3.091) BS01 rna ? GO:0001682 ... O29494 30327333
    475535 6hct:C (3.091) BS02 rna ? GO:0001682 ... O29494 30327333
    475536 6hct:D (3.091) BS01 rna ? GO:0001682 ... O29494 30327333
    475537 6hct:D (3.091) BS02 rna ? GO:0001682 ... O29494 30327333
    475538 6hct:G (3.091) BS01 rna ? GO:0001682 ... O29494 30327333
    475539 6hct:G (3.091) BS02 rna ? GO:0001682 ... O29494 30327333
    475540 6hcu:A (1.62) BS01 FYB 6.1.1.6 GO:0000166 ... Q8IDJ8 30894487 MOAD: ic50=0.015uM
    475541 6hcu:A (1.62) BS02 LYS 6.1.1.6 GO:0000166 ... Q8IDJ8 30894487
    475542 6hcu:A (1.62) BS03 HIS 6.1.1.6 GO:0000166 ... Q8IDJ8 30894487
    475543 6hcu:B (1.62) BS01 FYB 6.1.1.6 GO:0000166 ... Q8IDJ8 30894487 MOAD: ic50=0.015uM
    475544 6hcv:A (2.2) BS01 FYE 6.1.1.6 GO:0000166 ... Q8IDJ8 30894487 MOAD: ic50=0.005uM
    475545 6hcv:B (2.2) BS01 FYE 6.1.1.6 GO:0000166 ... Q8IDJ8 30894487 MOAD: ic50=0.005uM
    475546 6hcw:A (1.46) BS01 LYS 6.1.1.6 GO:0000049 ... Q5CR27 30894487
    475547 6hcw:A (1.46) BS02 FYB 6.1.1.6 GO:0000049 ... Q5CR27 30894487 MOAD: ic50=0.13uM
    475548 6hcw:B (1.46) BS01 LYS 6.1.1.6 GO:0000049 ... Q5CR27 30894487
    475549 6hcw:B (1.46) BS02 FYB 6.1.1.6 GO:0000049 ... Q5CR27 30894487 MOAD: ic50=0.13uM
    475550 6hcx:A (1.3) BS01 CA 3.2.1.18 GO:0004308 ... P03472 N/A
    475551 6hcx:A (1.3) BS02 ZMR 3.2.1.18 GO:0004308 ... P03472 N/A
    475552 6hcy:A (3.1) BS01 44E 1.16.1.- GO:0000139 ... Q687X5 30337524
    475553 6hcy:A (3.1) BS02 NAP 1.16.1.- GO:0000139 ... Q687X5 30337524
    475554 6hcy:A (3.1) BS03 HEM 1.16.1.- GO:0000139 ... Q687X5 30337524
    475555 6hcy:A (3.1) BS04 FAD 1.16.1.- GO:0000139 ... Q687X5 30337524
    475556 6hcy:A (3.1) BS05 44E 1.16.1.- GO:0000139 ... Q687X5 30337524
    475557 6hcy:A (3.1) BS06 FAD 1.16.1.- GO:0000139 ... Q687X5 30337524
    475558 6hcy:B (3.1) BS01 FAD 1.16.1.- GO:0000139 ... Q687X5 30337524
    475559 6hcy:B (3.1) BS02 NAP 1.16.1.- GO:0000139 ... Q687X5 30337524
    475560 6hcy:B (3.1) BS03 HEM 1.16.1.- GO:0000139 ... Q687X5 30337524
    475561 6hcy:B (3.1) BS04 FAD 1.16.1.- GO:0000139 ... Q687X5 30337524
    475562 6hcy:B (3.1) BS05 44E 1.16.1.- GO:0000139 ... Q687X5 30337524
    475563 6hcy:C (3.1) BS01 NAP 1.16.1.- GO:0000139 ... Q687X5 30337524
    475564 6hcy:C (3.1) BS02 HEM 1.16.1.- GO:0000139 ... Q687X5 30337524
    475565 6hcy:C (3.1) BS03 FAD 1.16.1.- GO:0000139 ... Q687X5 30337524
    475566 6hcy:C (3.1) BS04 44E 1.16.1.- GO:0000139 ... Q687X5 30337524
    475567 6hcy:C (3.1) BS05 FAD 1.16.1.- GO:0000139 ... Q687X5 30337524
    475568 6hcz:A (2.3) BS01 ZN ? GO:0000278 ... O60232 32170109
    475569 6hcz:B (2.3) BS01 ZN ? GO:0000278 ... O60232 32170109
    475570 6hd0:A (3.728) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 31648844
    475571 6hd0:B (3.728) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 31648844
    475572 6hd0:C (3.728) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 31648844
    475573 6hd0:T (3.728) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 31648844
    475574 6hd0:U (3.728) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 31648844
    475575 6hd0:U (3.728) BS02 ADP 3.6.4.6 GO:0005524 ... P55072 31648844
    475576 6hd0:V (3.728) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 31648844
    475577 6hd1:A (3.8) BS01 NAP 1.16.1.- GO:0000139 ... Q687X5 30337524
    475578 6hd1:A (3.8) BS02 HEM 1.16.1.- GO:0000139 ... Q687X5 30337524
    475579 6hd1:A (3.8) BS03 FAD 1.16.1.- GO:0000139 ... Q687X5 30337524
    475580 6hd1:A (3.8) BS04 44E 1.16.1.- GO:0000139 ... Q687X5 30337524
    475581 6hd1:A (3.8) BS05 FAD 1.16.1.- GO:0000139 ... Q687X5 30337524
    475582 6hd1:B (3.8) BS01 FAD 1.16.1.- GO:0000139 ... Q687X5 30337524
    475583 6hd1:B (3.8) BS02 NAP 1.16.1.- GO:0000139 ... Q687X5 30337524
    475584 6hd1:B (3.8) BS03 HEM 1.16.1.- GO:0000139 ... Q687X5 30337524
    475585 6hd1:B (3.8) BS04 FAD 1.16.1.- GO:0000139 ... Q687X5 30337524
    475586 6hd1:B (3.8) BS05 44E 1.16.1.- GO:0000139 ... Q687X5 30337524
    475587 6hd1:C (3.8) BS01 NAP 1.16.1.- GO:0000139 ... Q687X5 30337524
    475588 6hd1:C (3.8) BS02 HEM 1.16.1.- GO:0000139 ... Q687X5 30337524
    475589 6hd1:C (3.8) BS03 FAD 1.16.1.- GO:0000139 ... Q687X5 30337524
    475590 6hd1:C (3.8) BS04 44E 1.16.1.- GO:0000139 ... Q687X5 30337524
    475591 6hd1:C (3.8) BS05 FAD 1.16.1.- GO:0000139 ... Q687X5 30337524
    475592 6hd2:A (-1.00) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    475593 6hd3:A (2.8) BS01 ADP ? GO:0005524 ... P54609 31648844
    475594 6hd3:C (2.8) BS01 ADP ? GO:0005524 ... P54609 31648844
    475595 6hd4:A (2.03) BS01 FYW 2.7.10.2 GO:0004672 ... P00520 30137981
    475596 6hd4:A (2.03) BS02 STI 2.7.10.2 GO:0004672 ... P00520 30137981 BindingDB: IC50=10.8nM
    475597 6hd4:B (2.03) BS01 FYW 2.7.10.2 GO:0004672 ... P00520 30137981
    475598 6hd4:B (2.03) BS02 STI 2.7.10.2 GO:0004672 ... P00520 30137981 BindingDB: IC50=10.8nM
    475599 6hd6:A (2.3) BS01 FYH 2.7.10.2 GO:0004672 ... P00520 30137981
    475600 6hd6:A (2.3) BS02 STI 2.7.10.2 GO:0004672 ... P00520 30137981 BindingDB: IC50=10.8nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).