SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    4601 1bex:B (2.3) BS03 CU ? GO:0005507 ... P00282 10089343
    4602 1bex:B (2.3) BS04 RBU ? GO:0005507 ... P00282 10089343
    4603 1bez:A (2.1) BS01 ACY 3.8.1.5 GO:0003824 ... P22643 9790663
    4604 1bf2:A (2.0) BS01 CA 3.2.1.68 GO:0004553 ... P10342 9719642
    4605 1bf3:A (2.2) BS01 FAD 1.14.13.2 GO:0016491 ... P00438 9578477
    4606 1bf4:A (1.6) BS01 dna ? GO:0003677 ... P13123 9731772
    4607 1bf4:A (1.6) BS02 dna ? GO:0003677 ... P13123 9731772
    4608 1bf5:A (2.9) BS01 dna ? GO:0003677 ... P42224 9630226
    4609 1bf5:A (2.9) BS02 dna ? GO:0003677 ... P42224 9630226
    4610 1bf6:A (1.7) BS01 ZN 3.1.-.- GO:0008270 ... P45548 9548740
    4611 1bf6:A (1.7) BS02 ZN 3.1.-.- GO:0008270 ... P45548 9548740
    4612 1bf6:B (1.7) BS01 ZN 3.1.-.- GO:0008270 ... P45548 9548740
    4613 1bf6:B (1.7) BS02 ZN 3.1.-.- GO:0008270 ... P45548 9548740
    4614 1bfb:A (1.9) BS01 IDS ? GO:0008083 ... P09038 8599088
    4615 1bfb:A (1.9) BS02 SGN ? GO:0008083 ... P09038 8599088
    4616 1bfc:A (2.2) BS01 SGN ? GO:0008083 ... P09038 8599088
    4617 1bfc:A (2.2) BS02 IDS ? GO:0008083 ... P09038 8599088
    4618 1bfc:A (2.2) BS03 SGN ? GO:0008083 ... P09038 8599088
    4619 1bfd:A (1.6) BS01 CA 4.1.1.7 GO:0000287 ... P20906 9665697
    4620 1bfd:A (1.6) BS02 MG 4.1.1.7 GO:0000287 ... P20906 9665697
    4621 1bfd:A (1.6) BS03 TPP 4.1.1.7 GO:0000287 ... P20906 9665697
    4622 1bff:A (2.0) BS01 PO4 ? GO:0008083 ... P09038 15299950
    4623 1bfk:A (2.3) BS01 CA 3.4.21.62 GO:0004252 ... P00780 9675126
    4624 1bfk:A (2.3) BS02 CCN 3.4.21.62 GO:0004252 ... P00780 9675126
    4625 1bfk:A (2.3) BS03 CCN 3.4.21.62 GO:0004252 ... P00780 9675126
    4626 1bfk:A (2.3) BS04 CCN 3.4.21.62 GO:0004252 ... P00780 9675126
    4627 1bfn:A (2.07) BS01 GLC 3.2.1.2 GO:0000272 ... P10538 9677422
    4628 1bfn:A (2.07) BS02 GLC 3.2.1.2 GO:0000272 ... P10538 9677422
    4629 1bfr:A (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4630 1bfr:A (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4631 1bfr:A (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4632 1bfr:B (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4633 1bfr:B (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4634 1bfr:B (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4635 1bfr:C (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4636 1bfr:C (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4637 1bfr:C (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4638 1bfr:D (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4639 1bfr:D (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4640 1bfr:D (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4641 1bfr:E (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4642 1bfr:E (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4643 1bfr:E (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4644 1bfr:F (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4645 1bfr:F (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4646 1bfr:F (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4647 1bfr:G (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4648 1bfr:G (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4649 1bfr:G (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4650 1bfr:H (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4651 1bfr:H (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4652 1bfr:H (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4653 1bfr:I (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4654 1bfr:I (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4655 1bfr:I (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4656 1bfr:J (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4657 1bfr:J (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4658 1bfr:J (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4659 1bfr:K (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4660 1bfr:K (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4661 1bfr:K (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4662 1bfr:L (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4663 1bfr:L (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4664 1bfr:L (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4665 1bfr:M (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4666 1bfr:M (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4667 1bfr:M (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4668 1bfr:N (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4669 1bfr:N (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4670 1bfr:N (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4671 1bfr:O (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4672 1bfr:O (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4673 1bfr:O (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4674 1bfr:P (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4675 1bfr:P (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4676 1bfr:P (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4677 1bfr:Q (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4678 1bfr:Q (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4679 1bfr:Q (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4680 1bfr:R (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4681 1bfr:R (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4682 1bfr:R (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4683 1bfr:S (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4684 1bfr:S (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4685 1bfr:S (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4686 1bfr:T (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4687 1bfr:T (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4688 1bfr:T (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4689 1bfr:U (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4690 1bfr:U (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4691 1bfr:U (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4692 1bfr:V (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4693 1bfr:V (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4694 1bfr:V (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4695 1bfr:W (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4696 1bfr:W (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4697 1bfr:W (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4698 1bfr:X (2.94) BS01 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4699 1bfr:X (2.94) BS02 MN 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4700 1bfr:X (2.94) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 9867433
    4701 1bfu:A (2.2) BS01 CA 3.4.21.62 GO:0004252 ... P00780 9675126
    4702 1bfv:H (2.1) BS01 STG ? GO:0003823 ... P18529 9261086 MOAD: Ka~10000000M^-1
    4703 1bfv:L (2.1) BS01 ZN ? GO:0005576 ... P01631 9261086
    4704 1bfv:L (2.1) BS02 STG ? GO:0005576 ... P01631 9261086
    4705 1bfx:A (-1.00) BS01 HEM ? GO:0020037 ... P00173 10095768
    4706 1bfy:A (-1.00) BS01 FE 1.18.1.1 GO:0005506 ... P00268 N/A
    4707 1bg0:A (1.86) BS01 NO3 2.7.3.3 GO:0003824 ... P51541 9671698
    4708 1bg0:A (1.86) BS02 NO3 2.7.3.3 GO:0003824 ... P51541 9671698
    4709 1bg0:A (1.86) BS03 ADP 2.7.3.3 GO:0003824 ... P51541 9671698
    4710 1bg0:A (1.86) BS04 DAR 2.7.3.3 GO:0003824 ... P51541 9671698
    4711 1bg1:A (2.25) BS01 dna ? GO:0003677 ... P42227 9671298
    4712 1bg2:A (1.8) BS01 ADP ? GO:0003777 ... P33176 8606779
    4713 1bg3:A (2.8) BS01 BGC 2.7.1.1 GO:0001666 ... P05708 9665168
    4714 1bg3:A (2.8) BS02 G6P 2.7.1.1 GO:0001666 ... P05708 9665168
    4715 1bg3:A (2.8) BS03 BGC 2.7.1.1 GO:0001666 ... P05708 9665168
    4716 1bg3:A (2.8) BS04 G6P 2.7.1.1 GO:0001666 ... P05708 9665168
    4717 1bg3:B (2.8) BS01 BGC 2.7.1.1 GO:0001666 ... P05708 9665168
    4718 1bg3:B (2.8) BS02 G6P 2.7.1.1 GO:0001666 ... P05708 9665168
    4719 1bg3:B (2.8) BS03 BGC 2.7.1.1 GO:0001666 ... P05708 9665168
    4720 1bg3:B (2.8) BS04 G6P 2.7.1.1 GO:0001666 ... P05708 9665168
    4721 1bg4:A (1.75) BS01 GOL 3.2.1.8 GO:0004553 ... P56588 9792094
    4722 1bg4:A (1.75) BS02 GOL 3.2.1.8 GO:0004553 ... P56588 9792094
    4723 1bg4:A (1.75) BS03 GOL 3.2.1.8 GO:0004553 ... P56588 9792094
    4724 1bg4:A (1.75) BS04 GOL 3.2.1.8 GO:0004553 ... P56588 9792094
    4725 1bg4:A (1.75) BS05 GOL 3.2.1.8 GO:0004553 ... P56588 9792094
    4726 1bg4:A (1.75) BS06 GOL 3.2.1.8 GO:0004553 ... P56588 9792094
    4727 1bg9:A (2.8) BS01 BGC 3.2.1.1 GO:0004556 ... P04063 9571044
    4728 1bg9:A (2.8) BS02 DAF 3.2.1.1 GO:0004556 ... P04063 9571044
    4729 1bg9:A (2.8) BS03 CA 3.2.1.1 GO:0004556 ... P04063 9571044
    4730 1bg9:A (2.8) BS04 CA 3.2.1.1 GO:0004556 ... P04063 9571044
    4731 1bg9:A (2.8) BS05 CA 3.2.1.1 GO:0004556 ... P04063 9571044
    4732 1bg9:A (2.8) BS06 AF1 3.2.1.1 GO:0004556 ... P04063 9571044
    4733 1bgb:A (2.0) BS01 dna 3.1.21.4 GO:0003677 ... P04390 9705308
    4734 1bgb:A (2.0) BS02 dna 3.1.21.4 GO:0003677 ... P04390 9705308
    4735 1bgb:B (2.0) BS01 dna 3.1.21.4 GO:0003677 ... P04390 9705308
    4736 1bgb:B (2.0) BS02 dna 3.1.21.4 GO:0003677 ... P04390 9705308
    4737 1bgg:B (2.3) BS01 GCO 3.2.1.21 GO:0004553 ... P22073 9466926
    4738 1bgg:C (2.3) BS01 GCO 3.2.1.21 GO:0004553 ... P22073 9466926
    4739 1bgg:D (2.3) BS01 GCO 3.2.1.21 GO:0004553 ... P22073 9466926
    4740 1bgj:A (3.0) BS01 FAD 1.14.13.2 GO:0016491 ... P00438 9694855
    4741 1bgn:A (2.0) BS01 FAD 1.14.13.2 GO:0016491 ... P00438 9694855
    4742 1bgo:A (2.3) BS01 I10 3.4.22.38 GO:0006508 ... P43235 N/A
    4743 1bgp:A (1.9) BS01 CA 1.11.1.7 GO:0004601 ... Q40069 9442067
    4744 1bgp:A (1.9) BS02 NA 1.11.1.7 GO:0004601 ... Q40069 9442067
    4745 1bgp:A (1.9) BS03 HEM 1.11.1.7 GO:0004601 ... Q40069 9442067
    4746 1bgq:A (2.5) BS01 RDC ? GO:0005524 ... P02829 9925731 MOAD: Kd=2.7nM
    BindingDB: IC50=2e+2nM
    4747 1bgv:A (1.9) BS01 GLU 1.4.1.2 GO:0004352 ... P24295 8263917
    4748 1bgy:A (3.0) BS01 peptide 1.10.2.2 GO:0005739 ... P31800 9651245
    4749 1bgy:C (3.0) BS01 HEM 1.10.2.2 GO:0005743 ... P00157 9651245
    4750 1bgy:C (3.0) BS02 HEM 1.10.2.2 GO:0005743 ... P00157 9651245
    4751 1bgy:D (3.0) BS01 HEC 7.1.1.8 GO:0009055 ... P00125 9651245
    4752 1bgy:J (3.0) BS01 peptide 1.10.2.2 GO:0005739 ... P00130 9651245
    4753 1bgy:M (3.0) BS01 peptide 1.10.2.2 GO:0005739 ... P31800 9651245
    4754 1bgy:O (3.0) BS01 HEM 1.10.2.2 GO:0005743 ... P00157 9651245
    4755 1bgy:O (3.0) BS02 HEM 1.10.2.2 GO:0005743 ... P00157 9651245
    4756 1bgy:P (3.0) BS01 HEC 7.1.1.8 GO:0009055 ... P00125 9651245
    4757 1bgy:Q (3.0) BS01 FES 7.1.1.8 GO:0008121 ... P13272 9651245
    4758 1bgy:V (3.0) BS01 peptide 1.10.2.2 GO:0005739 ... P00130 9651245
    4759 1bh2:A (2.1) BS01 MG ? GO:0003924 ... P10824 9705312
    4760 1bh2:A (2.1) BS02 GSP ? GO:0003924 ... P10824 9705312
    4761 1bh3:A (2.19) BS01 C8E ? GO:0009279 ... P39767 9684893
    4762 1bh5:A (2.2) BS01 ZN 4.4.1.5 GO:0004462 ... Q04760 9705294
    4763 1bh5:A (2.2) BS02 GTX 4.4.1.5 GO:0004462 ... Q04760 9705294
    4764 1bh5:A (2.2) BS03 ZN 4.4.1.5 GO:0004462 ... Q04760 9705294
    4765 1bh5:A (2.2) BS04 GTX 4.4.1.5 GO:0004462 ... Q04760 9705294
    4766 1bh5:B (2.2) BS01 ZN 4.4.1.5 GO:0004462 ... Q04760 9705294
    4767 1bh5:B (2.2) BS02 GTX 4.4.1.5 GO:0004462 ... Q04760 9705294
    4768 1bh5:B (2.2) BS03 ZN 4.4.1.5 GO:0004462 ... Q04760 9705294
    4769 1bh5:B (2.2) BS04 GTX 4.4.1.5 GO:0004462 ... Q04760 9705294
    4770 1bh5:C (2.2) BS01 ZN 4.4.1.5 GO:0004462 ... Q04760 9705294
    4771 1bh5:C (2.2) BS02 GTX 4.4.1.5 GO:0004462 ... Q04760 9705294
    4772 1bh5:C (2.2) BS03 ZN 4.4.1.5 GO:0004462 ... Q04760 9705294
    4773 1bh5:C (2.2) BS04 GTX 4.4.1.5 GO:0004462 ... Q04760 9705294
    4774 1bh5:D (2.2) BS01 ZN 4.4.1.5 GO:0004462 ... Q04760 9705294
    4775 1bh5:D (2.2) BS02 GTX 4.4.1.5 GO:0004462 ... Q04760 9705294
    4776 1bh5:D (2.2) BS03 ZN 4.4.1.5 GO:0004462 ... Q04760 9705294
    4777 1bh5:D (2.2) BS04 GTX 4.4.1.5 GO:0004462 ... Q04760 9705294
    4778 1bh6:A (1.75) BS01 CA 3.4.21.62 GO:0004252 ... P00781 9826175
    4779 1bh6:A (1.75) BS02 1BH 3.4.21.62 GO:0004252 ... P00781 9826175
    4780 1bh9:B (2.6) BS01 PMB ? GO:0005634 ... Q15544 9695952
    4781 1bhc:J (2.7) BS01 SCN ? GO:0004867 ... P00974 10089400
    4782 1bhf:A (1.8) BS01 peptide 2.7.10.2 N/A P06239 9685372
    4783 1bhg:A (2.53) BS01 MAN 3.2.1.31 GO:0004553 ... P08236 8599764
    4784 1bhg:A (2.53) BS02 MAN 3.2.1.31 GO:0004553 ... P08236 8599764
    4785 1bhg:B (2.53) BS01 BMA 3.2.1.31 GO:0004553 ... P08236 8599764
    4786 1bhg:B (2.53) BS02 MAN 3.2.1.31 GO:0004553 ... P08236 8599764
    4787 1bhm:A (2.2) BS01 dna 3.1.21.4 GO:0000287 ... P23940 7624794
    4788 1bhm:A (2.2) BS02 dna 3.1.21.4 GO:0000287 ... P23940 7624794
    4789 1bhm:B (2.2) BS01 dna 3.1.21.4 GO:0000287 ... P23940 7624794
    4790 1bhm:B (2.2) BS02 dna 3.1.21.4 GO:0000287 ... P23940 7624794
    4791 1bhn:A (2.4) BS01 35G 2.7.4.6 GO:0000287 ... P52175 10329774
    4792 1bhn:A (2.4) BS02 GDP 2.7.4.6 GO:0000287 ... P52175 10329774
    4793 1bhn:B (2.4) BS01 35G 2.7.4.6 GO:0000287 ... P52175 10329774
    4794 1bhn:B (2.4) BS02 GDP 2.7.4.6 GO:0000287 ... P52175 10329774
    4795 1bhn:C (2.4) BS01 35G 2.7.4.6 GO:0000287 ... P52175 10329774
    4796 1bhn:C (2.4) BS02 GDP 2.7.4.6 GO:0000287 ... P52175 10329774
    4797 1bhn:D (2.4) BS01 35G 2.7.4.6 GO:0000287 ... P52175 10329774
    4798 1bhn:D (2.4) BS02 GDP 2.7.4.6 GO:0000287 ... P52175 10329774
    4799 1bhn:E (2.4) BS01 35G 2.7.4.6 GO:0000287 ... P52175 10329774
    4800 1bhn:E (2.4) BS02 GDP 2.7.4.6 GO:0000287 ... P52175 10329774

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).