SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    481201 6icz:X (3.0) BS02 rna ? GO:0003014 ... Q9H875 30728453
    481202 6icz:Z (3.0) BS01 IHP ? GO:0000375 ... O95391 30728453
    481203 6icz:Z (3.0) BS02 ZN ? GO:0000375 ... O95391 30728453
    481204 6icz:d (3.0) BS01 rna ? GO:0000245 ... P62316 30728453
    481205 6icz:e (3.0) BS01 rna ? GO:0000245 ... P62304 30728453
    481206 6icz:g (3.0) BS01 rna ? GO:0000245 ... P62308 30728453
    481207 6icz:i (3.0) BS01 rna ? GO:0000387 ... P14678 30728453
    481208 6icz:j (3.0) BS01 rna ? GO:0000243 ... P62314 30728453
    481209 6icz:p (3.0) BS01 rna ? GO:0000398 ... P08579 30728453
    481210 6icz:u (3.0) BS01 peptide 3.6.4.13 GO:0000184 ... P38919 30728453
    481211 6id0:A (2.9) BS01 rna ? GO:0000244 ... Q6P2Q9 30728453
    481212 6id0:A (2.9) BS02 rna ? GO:0000244 ... Q6P2Q9 30728453
    481213 6id0:A (2.9) BS03 rna ? GO:0000244 ... Q6P2Q9 30728453
    481214 6id0:A (2.9) BS04 rna ? GO:0000244 ... Q6P2Q9 30728453
    481215 6id0:A (2.9) BS05 IHP ? GO:0000244 ... Q6P2Q9 30728453
    481216 6id0:C (2.9) BS01 GTP ? GO:0000398 ... Q15029 30728453
    481217 6id0:J (2.9) BS01 rna ? GO:0000245 ... Q9BZJ0 30728453
    481218 6id0:L (2.9) BS01 rna ? GO:0000077 ... Q99459 30728453
    481219 6id0:L (2.9) BS02 rna ? GO:0000077 ... Q99459 30728453
    481220 6id0:M (2.9) BS01 rna ? GO:0000398 ... O95926 30728453
    481221 6id0:M (2.9) BS02 rna ? GO:0000398 ... O95926 30728453
    481222 6id0:N (2.9) BS01 rna ? GO:0000398 ... P41223 30728453
    481223 6id0:N (2.9) BS02 rna ? GO:0000398 ... P41223 30728453
    481224 6id0:N (2.9) BS03 ZN ? GO:0000398 ... P41223 30728453
    481225 6id0:N (2.9) BS04 ZN ? GO:0000398 ... P41223 30728453
    481226 6id0:O (2.9) BS01 rna ? GO:0000398 ... Q9NW64 30728453
    481227 6id0:O (2.9) BS02 rna ? GO:0000398 ... Q9NW64 30728453
    481228 6id0:O (2.9) BS03 ZN ? GO:0000398 ... Q9NW64 30728453
    481229 6id0:O (2.9) BS04 ZN ? GO:0000398 ... Q9NW64 30728453
    481230 6id0:O (2.9) BS05 ZN ? GO:0000398 ... Q9NW64 30728453
    481231 6id0:P (2.9) BS01 rna ? GO:0000398 ... Q9P013 30728453
    481232 6id0:P (2.9) BS02 rna ? GO:0000398 ... Q9P013 30728453
    481233 6id0:P (2.9) BS03 rna ? GO:0000398 ... Q9P013 30728453
    481234 6id0:R (2.9) BS01 rna ? GO:0000122 ... Q13573 30728453
    481235 6id0:R (2.9) BS02 rna ? GO:0000122 ... Q13573 30728453
    481236 6id0:T (2.9) BS01 rna ? GO:0000398 ... O43660 30728453
    481237 6id0:U (2.9) BS01 rna ? GO:0000398 ... Q2TBE0 30728453
    481238 6id0:U (2.9) BS02 ZN ? GO:0000398 ... Q2TBE0 30728453
    481239 6id0:W (2.9) BS01 rna ? GO:0000398 ... O60508 30728453
    481240 6id0:d (2.9) BS01 rna ? GO:0000245 ... P62316 30728453
    481241 6id0:e (2.9) BS01 rna ? GO:0000245 ... P62304 30728453
    481242 6id0:g (2.9) BS01 rna ? GO:0000245 ... P62308 30728453
    481243 6id0:j (2.9) BS01 rna ? GO:0000243 ... P62314 30728453
    481244 6id0:k (2.9) BS01 rna ? GO:0000245 ... P62316 30728453
    481245 6id0:p (2.9) BS01 rna ? GO:0000398 ... P08579 30728453
    481246 6id1:A (2.86) BS01 rna ? GO:0000244 ... Q6P2Q9 30728453
    481247 6id1:A (2.86) BS02 rna ? GO:0000244 ... Q6P2Q9 30728453
    481248 6id1:A (2.86) BS03 rna ? GO:0000244 ... Q6P2Q9 30728453
    481249 6id1:A (2.86) BS04 rna ? GO:0000244 ... Q6P2Q9 30728453
    481250 6id1:A (2.86) BS05 IHP ? GO:0000244 ... Q6P2Q9 30728453
    481251 6id1:C (2.86) BS01 GTP ? GO:0000398 ... Q15029 30728453
    481252 6id1:J (2.86) BS01 rna ? GO:0000245 ... Q9BZJ0 30728453
    481253 6id1:L (2.86) BS01 rna ? GO:0000077 ... Q99459 30728453
    481254 6id1:L (2.86) BS02 rna ? GO:0000077 ... Q99459 30728453
    481255 6id1:M (2.86) BS01 rna ? GO:0000398 ... O95926 30728453
    481256 6id1:M (2.86) BS02 rna ? GO:0000398 ... O95926 30728453
    481257 6id1:N (2.86) BS01 rna ? GO:0000398 ... P41223 30728453
    481258 6id1:N (2.86) BS02 ZN ? GO:0000398 ... P41223 30728453
    481259 6id1:N (2.86) BS03 ZN ? GO:0000398 ... P41223 30728453
    481260 6id1:N (2.86) BS04 ZN ? GO:0000398 ... P41223 30728453
    481261 6id1:O (2.86) BS01 rna ? GO:0000398 ... Q9NW64 30728453
    481262 6id1:O (2.86) BS02 rna ? GO:0000398 ... Q9NW64 30728453
    481263 6id1:O (2.86) BS03 ZN ? GO:0000398 ... Q9NW64 30728453
    481264 6id1:O (2.86) BS04 ZN ? GO:0000398 ... Q9NW64 30728453
    481265 6id1:O (2.86) BS05 ZN ? GO:0000398 ... Q9NW64 30728453
    481266 6id1:P (2.86) BS01 rna ? GO:0000398 ... Q9P013 30728453
    481267 6id1:P (2.86) BS02 rna ? GO:0000398 ... Q9P013 30728453
    481268 6id1:P (2.86) BS03 rna ? GO:0000398 ... Q9P013 30728453
    481269 6id1:Q (2.86) BS01 rna 3.6.4.13 GO:0000398 ... O60306 30728453
    481270 6id1:R (2.86) BS01 rna ? GO:0000122 ... Q13573 30728453
    481271 6id1:R (2.86) BS02 rna ? GO:0000122 ... Q13573 30728453
    481272 6id1:T (2.86) BS01 rna ? GO:0000398 ... O43660 30728453
    481273 6id1:U (2.86) BS01 rna ? GO:0000398 ... Q2TBE0 30728453
    481274 6id1:U (2.86) BS02 rna ? GO:0000398 ... Q2TBE0 30728453
    481275 6id1:U (2.86) BS03 ZN ? GO:0000398 ... Q2TBE0 30728453
    481276 6id1:W (2.86) BS01 rna ? GO:0000398 ... O60508 30728453
    481277 6id1:a (2.86) BS01 rna ? GO:0000243 ... P62318 30728453
    481278 6id1:d (2.86) BS01 rna ? GO:0000245 ... P62316 30728453
    481279 6id1:e (2.86) BS01 rna ? GO:0000245 ... P62304 30728453
    481280 6id1:f (2.86) BS01 rna ? GO:0000387 ... P62306 30728453
    481281 6id1:g (2.86) BS01 rna ? GO:0000245 ... P62308 30728453
    481282 6id1:j (2.86) BS01 rna ? GO:0000243 ... P62314 30728453
    481283 6id1:k (2.86) BS01 rna ? GO:0000245 ... P62316 30728453
    481284 6id1:p (2.86) BS01 rna ? GO:0000398 ... P08579 30728453
    481285 6id1:y (2.86) BS01 rna 5.2.1.8 GO:0000398 ... Q9UNP9 30728453
    481286 6id4:A (2.4) BS01 peptide ? N/A F6IQY1 30792391
    481287 6id4:E (2.4) BS01 peptide ? N/A F6IQY1 30792391
    481288 6idb:A (2.502) BS01 SIA ? GO:0019031 ... R4NN21 31747596
    481289 6ide:A (2.51) BS01 dna N/A GO:0003677 ... N/A 30610119
    481290 6ide:A (2.51) BS02 dna N/A GO:0003677 ... N/A 30610119
    481291 6ide:A (2.51) BS03 A1U N/A GO:0003677 ... N/A 30610119
    481292 6ide:B (2.51) BS01 dna N/A GO:0003677 ... N/A 30610119
    481293 6ide:B (2.51) BS02 dna N/A GO:0003677 ... N/A 30610119
    481294 6ide:B (2.51) BS03 A1U N/A GO:0003677 ... N/A 30610119
    481295 6idf:C (2.7) BS01 CLR ? GO:0000139 ... Q96BI3 30598546
    481296 6idf:C (2.7) BS02 CLR ? GO:0000139 ... Q96BI3 30598546
    481297 6idf:C (2.7) BS03 CLR ? GO:0000139 ... Q96BI3 30598546
    481298 6idg:H (2.0) BS01 rna N/A N/A N/A 30713158
    481299 6idg:L (2.0) BS01 rna N/A N/A N/A 30713158
    481300 6idj:A (1.9) BS01 FMN 1.3.5.2 GO:0004151 ... Q02127 33297567
    481301 6idj:A (1.9) BS02 9AU 1.3.5.2 GO:0004151 ... Q02127 33297567
    481302 6idn:A (1.5) BS01 CA 3.2.1.14 GO:0004553 ... A0A493R6X2 31790908
    481303 6ido:A (3.748) BS01 dna ?
    2.7.7.6
    GO:0003700 ... A6TGP0
    P13445
    31293000
    481304 6ido:A (3.748) BS02 dna ?
    2.7.7.6
    GO:0003700 ... A6TGP0
    P13445
    31293000
    481305 6ido:B (3.748) BS01 dna ?
    2.7.7.6
    GO:0003700 ... A6TGP0
    P13445
    31293000
    481306 6ido:B (3.748) BS02 dna ?
    2.7.7.6
    GO:0003700 ... A6TGP0
    P13445
    31293000
    481307 6idv:A (2.4) BS01 SNN ? GO:0004197 ... A0A509GV09 31123145
    481308 6idv:B (2.4) BS01 SNN ? GO:0004197 ... A0A509GV09 31123145
    481309 6idw:A (2.78) BS01 BGC 3.2.1.- GO:0004553 ... A0A076U926 31793907
    481310 6idw:B (2.78) BS01 BGC 3.2.1.- GO:0004553 ... A0A076U926 31793907
    481311 6idw:C (2.78) BS01 BGC 3.2.1.- GO:0004553 ... A0A076U926 31793907
    481312 6idw:C (2.78) BS02 BGC 3.2.1.- GO:0004553 ... A0A076U926 31793907
    481313 6idw:D (2.78) BS01 BGC 3.2.1.- GO:0004553 ... A0A076U926 31793907
    481314 6idw:D (2.78) BS02 BGC 3.2.1.- GO:0004553 ... A0A076U926 31793907
    481315 6idx:A (1.699) BS01 peptide ? N/A Q96JJ3 30604775
    481316 6idy:A (2.15) BS01 CA ? GO:0003674 ... Q4WG73 N/A
    481317 6idy:B (2.15) BS01 CA ? GO:0003674 ... Q4WG73 N/A
    481318 6idy:C (2.15) BS01 CA ? GO:0003674 ... Q4WG73 N/A
    481319 6idz:A (2.707) BS01 SIA ? GO:0019031 ... R4NN21 31747596
    481320 6ie0:B (2.976) BS01 ZN 1.1.1.4 GO:0000721 ... O34788 N/A
    481321 6ie0:C (2.976) BS01 ZN 1.1.1.4 GO:0000721 ... O34788 N/A
    481322 6ie0:D (2.976) BS01 ZN 1.1.1.4 GO:0000721 ... O34788 N/A
    481323 6ie2:A (2.8) BS01 MN 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... Q13686 32051559
    481324 6ie2:A (2.8) BS02 AKG 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... Q13686 32051559
    481325 6ie2:B (2.8) BS01 MN 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... Q13686 32051559
    481326 6ie2:B (2.8) BS02 AKG 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... Q13686 32051559
    481327 6ie2:C (2.8) BS01 MN 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... Q13686 32051559
    481328 6ie2:C (2.8) BS02 AKG 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... Q13686 32051559
    481329 6ie2:D (2.8) BS01 MN 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... Q13686 32051559
    481330 6ie2:D (2.8) BS02 AKG 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... Q13686 32051559
    481331 6ie2:E (2.8) BS01 MN 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... Q13686 32051559
    481332 6ie2:E (2.8) BS02 AKG 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... Q13686 32051559
    481333 6ie2:F (2.8) BS01 MN 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... Q13686 32051559
    481334 6ie2:F (2.8) BS02 AKG 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... Q13686 32051559
    481335 6ie2:G (2.8) BS01 MN 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... Q13686 32051559
    481336 6ie2:G (2.8) BS02 AKG 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... Q13686 32051559
    481337 6ie2:H (2.8) BS01 MN 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... Q13686 32051559
    481338 6ie2:H (2.8) BS02 AKG 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... Q13686 32051559
    481339 6ie3:A (1.97) BS01 MN 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... Q13686 32051559
    481340 6ie4:A (2.696) BS01 peptide ? N/A Q500V5 N/A
    481341 6ie4:C (2.696) BS01 peptide ? N/A Q500V5 N/A
    481342 6ie6:A (1.7) BS01 peptide ? N/A Q500V5 N/A
    481343 6ie7:A (2.7) BS01 peptide ? N/A Q500V5 N/A
    481344 6ie7:B (2.7) BS01 peptide ? N/A Q500V5 N/A
    481345 6ie7:B (2.7) BS02 peptide ? N/A Q500V5 N/A
    481346 6ie7:C (2.7) BS01 peptide ? N/A Q500V5 N/A
    481347 6ie7:C (2.7) BS02 peptide ? N/A Q500V5 N/A
    481348 6ie7:D (2.7) BS01 peptide ? N/A Q500V5 N/A
    481349 6ie8:A (2.0) BS01 CHD ? GO:0003677 ... A0A0F6AY66 30655545 MOAD: Kd=60.5uM
    481350 6ie9:A (1.78) BS01 JN3 ? GO:0003677 ... A0A0F6AY66 30655545 MOAD: Kd=65.3uM
    481351 6ied:A (3.0) BS01 HEM 1.17.99.9 GO:0005515 ... P12946 30397130
    481352 6ieg:A (3.55) BS01 ADP 3.6.4.13 GO:0000176 ... P42285 30842217
    481353 6ieg:B (3.55) BS01 ADP 3.6.4.13 GO:0000176 ... P42285 30842217
    481354 6ieh:B (2.892) BS01 ATP 3.6.4.13 GO:0000176 ... P42285 30842217
    481355 6iej:A (2.206) BS01 CA 3.1.1.4
    3.1.1.5
    GO:0005509 ... P49147 31050338
    481356 6iej:A (2.206) BS02 CA 3.1.1.4
    3.1.1.5
    GO:0005509 ... P49147 31050338
    481357 6iej:A (2.206) BS03 MG 3.1.1.4
    3.1.1.5
    GO:0005509 ... P49147 31050338
    481358 6iej:A (2.206) BS04 HXG 3.1.1.4
    3.1.1.5
    GO:0005509 ... P49147 31050338
    481359 6iej:B (2.206) BS01 MG 3.1.1.4
    3.1.1.5
    GO:0005509 ... P49147 31050338
    481360 6iej:B (2.206) BS02 CA 3.1.1.4
    3.1.1.5
    GO:0005509 ... P49147 31050338
    481361 6iej:B (2.206) BS03 CA 3.1.1.4
    3.1.1.5
    GO:0005509 ... P49147 31050338
    481362 6iej:B (2.206) BS04 CA 3.1.1.4
    3.1.1.5
    GO:0005509 ... P49147 31050338
    481363 6iej:B (2.206) BS05 HXG 3.1.1.4
    3.1.1.5
    GO:0005509 ... P49147 31050338
    481364 6iej:C (2.206) BS01 CA 3.1.1.4
    3.1.1.5
    GO:0005509 ... P49147 31050338
    481365 6iej:C (2.206) BS02 CA 3.1.1.4
    3.1.1.5
    GO:0005509 ... P49147 31050338
    481366 6iej:C (2.206) BS03 CA 3.1.1.4
    3.1.1.5
    GO:0005509 ... P49147 31050338
    481367 6iej:C (2.206) BS04 MG 3.1.1.4
    3.1.1.5
    GO:0005509 ... P49147 31050338
    481368 6iej:C (2.206) BS05 HXG 3.1.1.4
    3.1.1.5
    GO:0005509 ... P49147 31050338
    481369 6ien:A (2.7) BS01 AS1 4.3.2.1 GO:0003824 ... P9WPY7 30615268
    481370 6ien:A (2.7) BS02 FUM 4.3.2.1 GO:0003824 ... P9WPY7 30615268
    481371 6ien:A (2.7) BS03 AS1 4.3.2.1 GO:0003824 ... P9WPY7 30615268
    481372 6ien:B (2.7) BS01 AS1 4.3.2.1 GO:0003824 ... P9WPY7 30615268
    481373 6ien:B (2.7) BS02 AS1 4.3.2.1 GO:0003824 ... P9WPY7 30615268
    481374 6ien:B (2.7) BS03 AS1 4.3.2.1 GO:0003824 ... P9WPY7 30615268
    481375 6ien:C (2.7) BS01 AS1 4.3.2.1 GO:0003824 ... P9WPY7 30615268
    481376 6ien:C (2.7) BS02 FUM 4.3.2.1 GO:0003824 ... P9WPY7 30615268
    481377 6ien:C (2.7) BS03 ARG 4.3.2.1 GO:0003824 ... P9WPY7 30615268
    481378 6ien:C (2.7) BS04 AS1 4.3.2.1 GO:0003824 ... P9WPY7 30615268
    481379 6ien:D (2.7) BS01 FUM 4.3.2.1 GO:0003824 ... P9WPY7 30615268
    481380 6ien:D (2.7) BS02 AS1 4.3.2.1 GO:0003824 ... P9WPY7 30615268
    481381 6ien:D (2.7) BS03 AS1 4.3.2.1 GO:0003824 ... P9WPY7 30615268
    481382 6ieq:D (3.9) BS01 BMA N/A N/A N/A 31142746
    481383 6ieq:D (3.9) BS02 MAN N/A N/A N/A 31142746
    481384 6ieq:D (3.9) BS03 MAN N/A N/A N/A 31142746
    481385 6ieq:H (3.9) BS01 MAN N/A N/A N/A 31142746
    481386 6ieq:L (3.9) BS01 MAN N/A N/A N/A 31142746
    481387 6ieq:L (3.9) BS02 MAN N/A N/A N/A 31142746
    481388 6ies:A (1.8) BS01 9A7 5.3.99.12 GO:0005773 ... P59082 N/A
    481389 6ies:B (1.8) BS01 9A7 5.3.99.12 GO:0005773 ... P59082 N/A
    481390 6iet:A (2.101) BS01 ZN ? N/A O15016 31537782
    481391 6iet:A (2.101) BS02 ZN ? N/A O15016 31537782
    481392 6ieu:A (1.787) BS01 peptide ? N/A O15016 31537782
    481393 6ieu:A (1.787) BS02 ZN ? N/A O15016 31537782
    481394 6ieu:A (1.787) BS03 ZN ? N/A O15016 31537782
    481395 6iex:A (2.314) BS01 peptide ? N/A A0A499S0B6 31226552
    481396 6iey:A (2.097) BS01 CLM 3.1.1.1 GO:0016787 ... G3CR02 30645605
    481397 6iez:A (1.9) BS01 A50 ? GO:0008289 ... Q9Y5P4 N/A
    481398 6if0:A (1.8) BS01 A59 ? GO:0008289 ... Q9Y5P4 N/A
    481399 6if2:B (2.4) BS01 MG ? GO:0000281 ... Q15286 30905672
    481400 6if2:B (2.4) BS02 GTP ? GO:0000281 ... Q15286 30905672

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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