SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    482001 6iia:E (2.91) BS01 AV0 ? GO:0005515 ... P52002 30867446
    482002 6iid:A (2.986) BS01 dna 3.1.30.- GO:0003676 ... Q9Y2C4 30949702
    482003 6iid:A (2.986) BS02 dna 3.1.30.- GO:0003676 ... Q9Y2C4 30949702
    482004 6iid:B (2.986) BS01 dna 3.1.30.- GO:0003676 ... Q9Y2C4 30949702
    482005 6iid:B (2.986) BS02 dna 3.1.30.- GO:0003676 ... Q9Y2C4 30949702
    482006 6iid:C (2.986) BS01 dna 3.1.30.- GO:0003676 ... Q9Y2C4 30949702
    482007 6iid:C (2.986) BS02 dna 3.1.30.- GO:0003676 ... Q9Y2C4 30949702
    482008 6iid:D (2.986) BS01 dna 3.1.30.- GO:0003676 ... Q9Y2C4 30949702
    482009 6iid:D (2.986) BS02 dna 3.1.30.- GO:0003676 ... Q9Y2C4 30949702
    482010 6iie:A (2.142) BS01 CA 2.7.1.107
    2.7.1.93
    GO:0005509 ... P23743 30653270
    482011 6iie:A (2.142) BS02 CA 2.7.1.107
    2.7.1.93
    GO:0005509 ... P23743 30653270
    482012 6iie:A (2.142) BS03 GOL 2.7.1.107
    2.7.1.93
    GO:0005509 ... P23743 30653270
    482013 6iig:A (3.208) BS01 SIA ? GO:0019031 ... A0A059VBQ9 N/A
    482014 6iih:A (1.958) BS01 CA 3.2.1.17 GO:0003796 ... P00720
    Q8IYU8
    31397067
    482015 6iih:B (1.958) BS01 CA 3.2.1.17 GO:0003796 ... P00720
    Q8IYU8
    31397067
    482016 6iih:B (1.958) BS02 CA 3.2.1.17 GO:0003796 ... P00720
    Q8IYU8
    31397067
    482017 6iii:A (2.113) BS01 2PN 2.7.7.108 GO:0000287 ... P77649 N/A
    482018 6iii:A (2.113) BS02 AMP 2.7.7.108 GO:0000287 ... P77649 N/A
    482019 6iii:A (2.113) BS03 MG 2.7.7.108 GO:0000287 ... P77649 N/A
    482020 6iik:A (1.97) BS01 IU1 3.4.19.12 GO:0004843 ... P54578 30254335 MOAD: ic50=12.25uM
    BindingDB: IC50=4000nM
    482021 6iik:B (1.97) BS01 IU1 3.4.19.12 GO:0004843 ... P54578 30254335 MOAD: ic50=12.25uM
    BindingDB: IC50=4000nM
    482022 6iil:A (2.2) BS01 A8F 3.4.19.12 GO:0004843 ... P54578 30254335 MOAD: ic50=0.68uM
    482023 6iil:B (2.2) BS01 A8F 3.4.19.12 GO:0004843 ... P54578 30254335 MOAD: ic50=0.68uM
    482024 6iim:A (2.21) BS01 A8L 3.4.19.12 GO:0004843 ... P54578 30254335
    482025 6iim:B (2.21) BS01 A8L 3.4.19.12 GO:0004843 ... P54578 30254335
    482026 6iin:A (2.53) BS01 A8O 3.4.19.12 GO:0004843 ... P54578 30254335
    482027 6iin:B (2.53) BS01 A8O 3.4.19.12 GO:0004843 ... P54578 30254335
    482028 6iiq:A (1.85) BS01 dna ? N/A Q9Y3E1 N/A
    482029 6iiq:B (1.85) BS01 dna ? N/A Q9Y3E1 N/A
    482030 6iiq:B (1.85) BS02 dna ? N/A Q9Y3E1 N/A
    482031 6iir:A (2.2) BS01 dna ? N/A Q9Y3E1 N/A
    482032 6iir:A (2.2) BS02 dna ? N/A Q9Y3E1 N/A
    482033 6iir:B (2.2) BS01 dna ? N/A Q9Y3E1 N/A
    482034 6iis:A (2.358) BS01 dna ? N/A Q9Y3E1 N/A
    482035 6iis:A (2.358) BS02 peptide ? N/A Q9Y3E1 N/A
    482036 6iis:B (2.358) BS01 dna ? N/A Q9Y3E1 N/A
    482037 6iis:B (2.358) BS02 dna ? N/A Q9Y3E1 N/A
    482038 6iis:B (2.358) BS03 peptide ? N/A Q9Y3E1 N/A
    482039 6iit:A (2.1) BS01 dna ? N/A Q9Y3E1 N/A
    482040 6iit:A (2.1) BS02 peptide ? N/A Q9Y3E1 N/A
    482041 6iit:B (2.1) BS01 dna ? N/A Q9Y3E1 N/A
    482042 6iit:B (2.1) BS02 dna ? N/A Q9Y3E1 N/A
    482043 6iit:B (2.1) BS03 peptide ? N/A Q9Y3E1 N/A
    482044 6iiu:A (2.5) BS01 A8X ? GO:0004930 ... P00268
    P0ABE7
    P21731
    30510189 MOAD: Ki=11nM
    482045 6iiu:A (2.5) BS02 ZN ? GO:0004930 ... P00268
    P0ABE7
    P21731
    30510189
    482046 6iiu:A (2.5) BS03 CLR ? GO:0004930 ... P00268
    P0ABE7
    P21731
    30510189
    482047 6iiv:A (3.0) BS01 A90 ? GO:0004930 ... P00268
    P0ABE7
    P21731
    30510189
    482048 6iiv:A (3.0) BS02 ZN ? GO:0004930 ... P00268
    P0ABE7
    P21731
    30510189
    482049 6iiv:A (3.0) BS03 CLR ? GO:0004930 ... P00268
    P0ABE7
    P21731
    30510189
    482050 6iiw:A (1.699) BS01 peptide 2.3.2.27 N/A Q96T88 32144273
    482051 6iiw:A (1.699) BS02 ZN 2.3.2.27 N/A Q96T88 32144273
    482052 6iiw:A (1.699) BS03 ZN 2.3.2.27 N/A Q96T88 32144273
    482053 6iiw:A (1.699) BS04 ZN 2.3.2.27 N/A Q96T88 32144273
    482054 6iiw:A (1.699) BS05 ZN 2.3.2.27 N/A Q96T88 32144273
    482055 6iix:A (1.73) BS01 CO8 ? GO:0016757 ... Q70AY4 30599088
    482056 6iiy:A (1.29) BS01 CO ? GO:0016137 ... Q6ZZJ1 30599088
    482057 6ij2:A (1.7) BS01 rna ? GO:0000166 ... A0A0H3AJ04 31647518
    482058 6ij2:A (1.7) BS02 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    482059 6ij2:A (1.7) BS03 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    482060 6ij2:A (1.7) BS04 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    482061 6ij2:A (1.7) BS05 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    482062 6ij2:B (1.7) BS01 rna ? GO:0000166 ... A0A0H3AJ04 31647518
    482063 6ij2:B (1.7) BS02 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    482064 6ij2:B (1.7) BS03 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    482065 6ij2:B (1.7) BS04 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    482066 6ij2:B (1.7) BS05 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    482067 6ij2:C (1.7) BS01 rna ? GO:0000166 ... A0A0H3AJ04 31647518
    482068 6ij2:C (1.7) BS02 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    482069 6ij2:C (1.7) BS03 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    482070 6ij2:C (1.7) BS04 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    482071 6ij2:C (1.7) BS05 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    482072 6ij2:D (1.7) BS01 rna ? GO:0000166 ... A0A0H3AJ04 31647518
    482073 6ij2:D (1.7) BS02 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    482074 6ij2:D (1.7) BS03 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    482075 6ij2:D (1.7) BS04 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    482076 6ij2:D (1.7) BS05 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    482077 6ij9:A (3.0) BS01 UDP 2.4.1.- GO:0005576 ... Q9LNE6 N/A
    482078 6ij9:B (3.0) BS01 UDP 2.4.1.- GO:0005576 ... Q9LNE6 N/A
    482079 6ij9:C (3.0) BS01 UDP 2.4.1.- GO:0005576 ... Q9LNE6 N/A
    482080 6ij9:D (3.0) BS01 UDP 2.4.1.- GO:0005576 ... Q9LNE6 N/A
    482081 6ija:A (3.214) BS01 AWU 2.4.1.- GO:0005576 ... Q9LNE6 30893500
    482082 6ija:B (3.214) BS01 AWU 2.4.1.- GO:0005576 ... Q9LNE6 30893500
    482083 6ijb:B (2.111) BS01 AMP N/A N/A N/A 30677184
    482084 6ijb:B (2.111) BS02 A8C N/A N/A N/A 30677184
    482085 6ijd:A (3.206) BS01 QUE 2.4.1.- GO:0005576 ... Q9LNE6 30893500
    482086 6ijd:B (3.206) BS01 QUE 2.4.1.- GO:0005576 ... Q9LNE6 30893500
    482087 6ijh:A (2.6) BS01 ZN 3.1.4.17 GO:0004114 ... Q9Y233 30888810
    482088 6ijh:A (2.6) BS02 AEO 3.1.4.17 GO:0004114 ... Q9Y233 30888810 BindingDB: IC50=68nM
    482089 6ijh:B (2.6) BS01 ZN 3.1.4.17 GO:0004114 ... Q9Y233 30888810
    482090 6ijh:B (2.6) BS02 AEO 3.1.4.17 GO:0004114 ... Q9Y233 30888810 BindingDB: IC50=68nM
    482091 6iji:A (2.7) BS01 ZN 3.1.4.17 GO:0004114 ... Q9Y233 30888810
    482092 6iji:B (2.7) BS01 ZN 3.1.4.17 GO:0004114 ... Q9Y233 30888810
    482093 6iji:B (2.7) BS02 AEL 3.1.4.17 GO:0004114 ... Q9Y233 30888810 BindingDB: IC50=0.440000nM
    482094 6ijj:1 (2.89) BS01 CLA ? GO:0009416 ... Q05093 30850819
    482095 6ijj:1 (2.89) BS02 CLA ? GO:0009416 ... Q05093 30850819
    482096 6ijj:1 (2.89) BS03 CLA ? GO:0009416 ... Q05093 30850819
    482097 6ijj:1 (2.89) BS04 CLA ? GO:0009416 ... Q05093 30850819
    482098 6ijj:1 (2.89) BS05 CLA ? GO:0009416 ... Q05093 30850819
    482099 6ijj:1 (2.89) BS06 CLA ? GO:0009416 ... Q05093 30850819
    482100 6ijj:1 (2.89) BS07 CLA ? GO:0009416 ... Q05093 30850819
    482101 6ijj:1 (2.89) BS08 CLA ? GO:0009416 ... Q05093 30850819
    482102 6ijj:1 (2.89) BS09 CLA ? GO:0009416 ... Q05093 30850819
    482103 6ijj:1 (2.89) BS10 CLA ? GO:0009416 ... Q05093 30850819
    482104 6ijj:1 (2.89) BS11 CLA ? GO:0009416 ... Q05093 30850819
    482105 6ijj:1 (2.89) BS12 CLA ? GO:0009416 ... Q05093 30850819
    482106 6ijj:1 (2.89) BS13 CLA ? GO:0009416 ... Q05093 30850819
    482107 6ijj:1 (2.89) BS14 CLA ? GO:0009416 ... Q05093 30850819
    482108 6ijj:3 (2.89) BS01 CLA N/A GO:0009765 ... N/A 30850819
    482109 6ijj:3 (2.89) BS02 CLA N/A GO:0009765 ... N/A 30850819
    482110 6ijj:3 (2.89) BS03 CLA N/A GO:0009765 ... N/A 30850819
    482111 6ijj:3 (2.89) BS04 CLA N/A GO:0009765 ... N/A 30850819
    482112 6ijj:3 (2.89) BS05 CLA N/A GO:0009765 ... N/A 30850819
    482113 6ijj:3 (2.89) BS06 CLA N/A GO:0009765 ... N/A 30850819
    482114 6ijj:3 (2.89) BS07 CLA N/A GO:0009765 ... N/A 30850819
    482115 6ijj:3 (2.89) BS08 CLA N/A GO:0009765 ... N/A 30850819
    482116 6ijj:3 (2.89) BS09 CLA N/A GO:0009765 ... N/A 30850819
    482117 6ijj:3 (2.89) BS10 CLA N/A GO:0009765 ... N/A 30850819
    482118 6ijj:3 (2.89) BS11 CLA N/A GO:0009765 ... N/A 30850819
    482119 6ijj:3 (2.89) BS12 CLA N/A GO:0009765 ... N/A 30850819
    482120 6ijj:3 (2.89) BS13 CLA N/A GO:0009765 ... N/A 30850819
    482121 6ijj:3 (2.89) BS14 CLA N/A GO:0009765 ... N/A 30850819
    482122 6ijj:3 (2.89) BS15 CLA N/A GO:0009765 ... N/A 30850819
    482123 6ijj:3 (2.89) BS16 CLA N/A GO:0009765 ... N/A 30850819
    482124 6ijj:3 (2.89) BS17 CLA N/A GO:0009765 ... N/A 30850819
    482125 6ijj:3 (2.89) BS18 CLA N/A GO:0009765 ... N/A 30850819
    482126 6ijj:4 (2.89) BS01 CLA N/A GO:0009765 ... N/A 30850819
    482127 6ijj:4 (2.89) BS02 CLA N/A GO:0009765 ... N/A 30850819
    482128 6ijj:4 (2.89) BS03 CLA N/A GO:0009765 ... N/A 30850819
    482129 6ijj:4 (2.89) BS04 CLA N/A GO:0009765 ... N/A 30850819
    482130 6ijj:4 (2.89) BS05 CLA N/A GO:0009765 ... N/A 30850819
    482131 6ijj:4 (2.89) BS06 CLA N/A GO:0009765 ... N/A 30850819
    482132 6ijj:4 (2.89) BS07 CLA N/A GO:0009765 ... N/A 30850819
    482133 6ijj:4 (2.89) BS08 CLA N/A GO:0009765 ... N/A 30850819
    482134 6ijj:4 (2.89) BS09 CLA N/A GO:0009765 ... N/A 30850819
    482135 6ijj:4 (2.89) BS10 CLA N/A GO:0009765 ... N/A 30850819
    482136 6ijj:4 (2.89) BS11 CLA N/A GO:0009765 ... N/A 30850819
    482137 6ijj:4 (2.89) BS12 CLA N/A GO:0009765 ... N/A 30850819
    482138 6ijj:4 (2.89) BS13 CLA N/A GO:0009765 ... N/A 30850819
    482139 6ijj:4 (2.89) BS14 CLA N/A GO:0009765 ... N/A 30850819
    482140 6ijj:4 (2.89) BS15 CLA N/A GO:0009765 ... N/A 30850819
    482141 6ijj:4 (2.89) BS16 CLA N/A GO:0009765 ... N/A 30850819
    482142 6ijj:5 (2.89) BS01 CLA ? GO:0009416 ... Q75VY8 30850819
    482143 6ijj:5 (2.89) BS02 CLA ? GO:0009416 ... Q75VY8 30850819
    482144 6ijj:5 (2.89) BS03 CLA ? GO:0009416 ... Q75VY8 30850819
    482145 6ijj:5 (2.89) BS04 CLA ? GO:0009416 ... Q75VY8 30850819
    482146 6ijj:5 (2.89) BS05 CLA ? GO:0009416 ... Q75VY8 30850819
    482147 6ijj:5 (2.89) BS06 CLA ? GO:0009416 ... Q75VY8 30850819
    482148 6ijj:5 (2.89) BS07 CLA ? GO:0009416 ... Q75VY8 30850819
    482149 6ijj:5 (2.89) BS08 CLA ? GO:0009416 ... Q75VY8 30850819
    482150 6ijj:5 (2.89) BS09 CLA ? GO:0009416 ... Q75VY8 30850819
    482151 6ijj:5 (2.89) BS10 CLA ? GO:0009416 ... Q75VY8 30850819
    482152 6ijj:5 (2.89) BS11 CLA ? GO:0009416 ... Q75VY8 30850819
    482153 6ijj:5 (2.89) BS12 CLA ? GO:0009416 ... Q75VY8 30850819
    482154 6ijj:5 (2.89) BS13 CLA ? GO:0009416 ... Q75VY8 30850819
    482155 6ijj:5 (2.89) BS14 CLA ? GO:0009416 ... Q75VY8 30850819
    482156 6ijj:5 (2.89) BS15 CLA ? GO:0009416 ... Q75VY8 30850819
    482157 6ijj:5 (2.89) BS16 CLA ? GO:0009416 ... Q75VY8 30850819
    482158 6ijj:5 (2.89) BS17 CLA ? GO:0009416 ... Q75VY8 30850819
    482159 6ijj:5 (2.89) BS18 CLA ? GO:0009416 ... Q75VY8 30850819
    482160 6ijj:5 (2.89) BS19 CLA ? GO:0009416 ... Q75VY8 30850819
    482161 6ijj:5 (2.89) BS20 CLA ? GO:0009416 ... Q75VY8 30850819
    482162 6ijj:6 (2.89) BS01 CLA ? GO:0009416 ... Q75VY6 30850819
    482163 6ijj:6 (2.89) BS02 CLA ? GO:0009416 ... Q75VY6 30850819
    482164 6ijj:6 (2.89) BS03 CLA ? GO:0009416 ... Q75VY6 30850819
    482165 6ijj:6 (2.89) BS04 CLA ? GO:0009416 ... Q75VY6 30850819
    482166 6ijj:6 (2.89) BS05 CLA ? GO:0009416 ... Q75VY6 30850819
    482167 6ijj:6 (2.89) BS06 CLA ? GO:0009416 ... Q75VY6 30850819
    482168 6ijj:6 (2.89) BS07 CLA ? GO:0009416 ... Q75VY6 30850819
    482169 6ijj:6 (2.89) BS08 CLA ? GO:0009416 ... Q75VY6 30850819
    482170 6ijj:6 (2.89) BS09 CLA ? GO:0009416 ... Q75VY6 30850819
    482171 6ijj:6 (2.89) BS10 CLA ? GO:0009416 ... Q75VY6 30850819
    482172 6ijj:6 (2.89) BS11 CLA ? GO:0009416 ... Q75VY6 30850819
    482173 6ijj:6 (2.89) BS12 CLA ? GO:0009416 ... Q75VY6 30850819
    482174 6ijj:6 (2.89) BS13 CLA ? GO:0009416 ... Q75VY6 30850819
    482175 6ijj:6 (2.89) BS14 CLA ? GO:0009416 ... Q75VY6 30850819
    482176 6ijj:6 (2.89) BS15 CLA ? GO:0009416 ... Q75VY6 30850819
    482177 6ijj:6 (2.89) BS16 CLA ? GO:0009416 ... Q75VY6 30850819
    482178 6ijj:6 (2.89) BS17 CLA ? GO:0009416 ... Q75VY6 30850819
    482179 6ijj:6 (2.89) BS18 CLA ? GO:0009416 ... Q75VY6 30850819
    482180 6ijj:6 (2.89) BS19 CLA ? GO:0009416 ... Q75VY6 30850819
    482181 6ijj:7 (2.89) BS01 CLA ? GO:0009416 ... Q84Y02 30850819
    482182 6ijj:7 (2.89) BS02 CLA ? GO:0009416 ... Q84Y02 30850819
    482183 6ijj:7 (2.89) BS03 CLA ? GO:0009416 ... Q84Y02 30850819
    482184 6ijj:7 (2.89) BS04 CLA ? GO:0009416 ... Q84Y02 30850819
    482185 6ijj:7 (2.89) BS05 CLA ? GO:0009416 ... Q84Y02 30850819
    482186 6ijj:7 (2.89) BS06 CLA ? GO:0009416 ... Q84Y02 30850819
    482187 6ijj:7 (2.89) BS07 CLA ? GO:0009416 ... Q84Y02 30850819
    482188 6ijj:7 (2.89) BS08 CLA ? GO:0009416 ... Q84Y02 30850819
    482189 6ijj:7 (2.89) BS09 CLA ? GO:0009416 ... Q84Y02 30850819
    482190 6ijj:7 (2.89) BS10 CLA ? GO:0009416 ... Q84Y02 30850819
    482191 6ijj:7 (2.89) BS11 CLA ? GO:0009416 ... Q84Y02 30850819
    482192 6ijj:7 (2.89) BS12 CLA ? GO:0009416 ... Q84Y02 30850819
    482193 6ijj:7 (2.89) BS13 CLA ? GO:0009416 ... Q84Y02 30850819
    482194 6ijj:7 (2.89) BS14 CLA ? GO:0009416 ... Q84Y02 30850819
    482195 6ijj:7 (2.89) BS15 CLA ? GO:0009416 ... Q84Y02 30850819
    482196 6ijj:7 (2.89) BS16 CLA ? GO:0009416 ... Q84Y02 30850819
    482197 6ijj:8 (2.89) BS01 CLA ? GO:0009416 ... Q75VY7 30850819
    482198 6ijj:8 (2.89) BS02 CLA ? GO:0009416 ... Q75VY7 30850819
    482199 6ijj:8 (2.89) BS03 CLA ? GO:0009416 ... Q75VY7 30850819
    482200 6ijj:8 (2.89) BS04 CLA ? GO:0009416 ... Q75VY7 30850819

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).