SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    483801 6iu8:B (2.7) BS03 CO N/A GO:0005384 ... N/A 30742036
    483802 6iu8:B (2.7) BS04 ZN N/A GO:0005384 ... N/A 30742036
    483803 6iu8:B (2.7) BS05 CO N/A GO:0005384 ... N/A 30742036
    483804 6iu8:C (2.7) BS01 ZN N/A GO:0005384 ... N/A 30742036
    483805 6iu8:C (2.7) BS02 ZN N/A GO:0005384 ... N/A 30742036
    483806 6iu8:C (2.7) BS03 CO N/A GO:0005384 ... N/A 30742036
    483807 6iu8:C (2.7) BS04 CO N/A GO:0005384 ... N/A 30742036
    483808 6iu8:C (2.7) BS05 CO N/A GO:0005384 ... N/A 30742036
    483809 6iu8:D (2.7) BS01 ZN N/A GO:0005384 ... N/A 30742036
    483810 6iu8:D (2.7) BS02 CO N/A GO:0005384 ... N/A 30742036
    483811 6iu8:D (2.7) BS03 ZN N/A GO:0005384 ... N/A 30742036
    483812 6iu8:D (2.7) BS04 CO N/A GO:0005384 ... N/A 30742036
    483813 6iu8:E (2.7) BS01 ZN N/A GO:0005384 ... N/A 30742036
    483814 6iu8:E (2.7) BS02 CO N/A GO:0005384 ... N/A 30742036
    483815 6iu8:E (2.7) BS03 ZN N/A GO:0005384 ... N/A 30742036
    483816 6iu8:E (2.7) BS04 CO N/A GO:0005384 ... N/A 30742036
    483817 6iu8:F (2.7) BS01 ZN N/A GO:0005384 ... N/A 30742036
    483818 6iu8:F (2.7) BS02 CO N/A GO:0005384 ... N/A 30742036
    483819 6iu8:F (2.7) BS03 CO N/A GO:0005384 ... N/A 30742036
    483820 6iu8:F (2.7) BS04 CO N/A GO:0005384 ... N/A 30742036
    483821 6iu8:H (2.7) BS01 ZN N/A GO:0005384 ... N/A 30742036
    483822 6iu8:H (2.7) BS02 CO N/A GO:0005384 ... N/A 30742036
    483823 6iu8:H (2.7) BS03 ZN N/A GO:0005384 ... N/A 30742036
    483824 6iu8:H (2.7) BS04 CO N/A GO:0005384 ... N/A 30742036
    483825 6iu8:I (2.7) BS01 ZN N/A GO:0005384 ... N/A 30742036
    483826 6iu8:I (2.7) BS02 CO N/A GO:0005384 ... N/A 30742036
    483827 6iu8:I (2.7) BS03 CO N/A GO:0005384 ... N/A 30742036
    483828 6iu8:I (2.7) BS04 ZN N/A GO:0005384 ... N/A 30742036
    483829 6iu9:A (3.0) BS01 ZN N/A GO:0005384 ... N/A 30742036
    483830 6iu9:A (3.0) BS02 FE2 N/A GO:0005384 ... N/A 30742036
    483831 6iu9:A (3.0) BS03 ZN N/A GO:0005384 ... N/A 30742036
    483832 6iu9:B (3.0) BS01 ZN N/A GO:0005384 ... N/A 30742036
    483833 6iu9:B (3.0) BS02 FE2 N/A GO:0005384 ... N/A 30742036
    483834 6iu9:B (3.0) BS03 ZN N/A GO:0005384 ... N/A 30742036
    483835 6iu9:C (3.0) BS01 ZN N/A GO:0005384 ... N/A 30742036
    483836 6iu9:C (3.0) BS02 ZN N/A GO:0005384 ... N/A 30742036
    483837 6iu9:C (3.0) BS03 ZN N/A GO:0005384 ... N/A 30742036
    483838 6iu9:C (3.0) BS04 ZN N/A GO:0005384 ... N/A 30742036
    483839 6iu9:C (3.0) BS05 FE2 N/A GO:0005384 ... N/A 30742036
    483840 6iu9:D (3.0) BS01 ZN N/A GO:0005384 ... N/A 30742036
    483841 6iu9:D (3.0) BS02 ZN N/A GO:0005384 ... N/A 30742036
    483842 6iu9:D (3.0) BS03 FE2 N/A GO:0005384 ... N/A 30742036
    483843 6iu9:E (3.0) BS01 ZN N/A GO:0005384 ... N/A 30742036
    483844 6iu9:E (3.0) BS02 FE2 N/A GO:0005384 ... N/A 30742036
    483845 6iu9:E (3.0) BS03 ZN N/A GO:0005384 ... N/A 30742036
    483846 6iu9:F (3.0) BS01 ZN N/A GO:0005384 ... N/A 30742036
    483847 6iu9:F (3.0) BS02 FE2 N/A GO:0005384 ... N/A 30742036
    483848 6iu9:F (3.0) BS03 ZN N/A GO:0005384 ... N/A 30742036
    483849 6iu9:H (3.0) BS01 ZN N/A GO:0005384 ... N/A 30742036
    483850 6iu9:H (3.0) BS02 FE2 N/A GO:0005384 ... N/A 30742036
    483851 6iu9:H (3.0) BS03 ZN N/A GO:0005384 ... N/A 30742036
    483852 6iu9:I (3.0) BS01 ZN N/A GO:0005384 ... N/A 30742036
    483853 6iu9:I (3.0) BS02 ZN N/A GO:0005384 ... N/A 30742036
    483854 6iu9:I (3.0) BS03 ZN N/A GO:0005384 ... N/A 30742036
    483855 6iua:A (1.7) BS01 peptide ? N/A P52293 30685087
    483856 6iub:A (1.902) BS01 ATP ? GO:0005524 ... O25759 30544248
    483857 6iub:A (1.902) BS02 ATP ? GO:0005524 ... O25759 30544248
    483858 6iub:B (1.902) BS01 ATP ? GO:0005524 ... O25759 30544248
    483859 6iub:B (1.902) BS02 ATP ? GO:0005524 ... O25759 30544248
    483860 6iuc:A (3.4) BS01 dna ? GO:0005524 ... O25759 30544248
    483861 6iuc:A (3.4) BS02 dna ? GO:0005524 ... O25759 30544248
    483862 6iuc:A (3.4) BS03 ATP ? GO:0005524 ... O25759 30544248
    483863 6iuc:A (3.4) BS04 ATP ? GO:0005524 ... O25759 30544248
    483864 6iuc:B (3.4) BS01 dna ? GO:0005524 ... O25759 30544248
    483865 6iuc:B (3.4) BS02 ATP ? GO:0005524 ... O25759 30544248
    483866 6iuc:B (3.4) BS03 ATP ? GO:0005524 ... O25759 30544248
    483867 6iuc:B (3.4) BS04 MG ? GO:0005524 ... O25759 30544248
    483868 6iuc:C (3.4) BS01 dna ? GO:0005524 ... O25759 30544248
    483869 6iuc:C (3.4) BS02 dna ? GO:0005524 ... O25759 30544248
    483870 6iuc:C (3.4) BS03 ATP ? GO:0005524 ... O25759 30544248
    483871 6iuc:C (3.4) BS04 MG ? GO:0005524 ... O25759 30544248
    483872 6iuc:C (3.4) BS05 ATP ? GO:0005524 ... O25759 30544248
    483873 6iuc:D (3.4) BS01 dna ? GO:0005524 ... O25759 30544248
    483874 6iuc:D (3.4) BS02 dna ? GO:0005524 ... O25759 30544248
    483875 6iuc:D (3.4) BS03 ATP ? GO:0005524 ... O25759 30544248
    483876 6iuc:D (3.4) BS04 ATP ? GO:0005524 ... O25759 30544248
    483877 6iuc:D (3.4) BS05 MG ? GO:0005524 ... O25759 30544248
    483878 6iud:A (2.506) BS01 dna ? GO:0005524 ... O25759 30544248
    483879 6iud:A (2.506) BS02 ADP ? GO:0005524 ... O25759 30544248
    483880 6iud:B (2.506) BS01 dna ? GO:0005524 ... O25759 30544248
    483881 6iud:B (2.506) BS02 dna ? GO:0005524 ... O25759 30544248
    483882 6iud:B (2.506) BS03 ADP ? GO:0005524 ... O25759 30544248
    483883 6iud:B (2.506) BS04 ADP ? GO:0005524 ... O25759 30544248
    483884 6iud:C (2.506) BS01 dna ? GO:0005524 ... O25759 30544248
    483885 6iud:C (2.506) BS02 dna ? GO:0005524 ... O25759 30544248
    483886 6iud:C (2.506) BS03 ADP ? GO:0005524 ... O25759 30544248
    483887 6iud:C (2.506) BS04 ADP ? GO:0005524 ... O25759 30544248
    483888 6iud:D (2.506) BS01 dna ? GO:0005524 ... O25759 30544248
    483889 6iud:D (2.506) BS02 dna ? GO:0005524 ... O25759 30544248
    483890 6iud:D (2.506) BS03 ADP ? GO:0005524 ... O25759 30544248
    483891 6iud:D (2.506) BS04 ADP ? GO:0005524 ... O25759 30544248
    483892 6iuf:A (2.052) BS01 ACO N/A N/A N/A 30936526
    483893 6iuf:B (2.052) BS01 ACO N/A N/A N/A 30936526
    483894 6iug:A (3.9) BS01 ADP ? GO:0005524 ... B6TQ08 31628168
    483895 6iug:B (3.9) BS01 ADP ? GO:0005524 ... B6TQ08 31628168
    483896 6iug:C (3.9) BS01 ADP ? GO:0005524 ... B6TQ08 31628168
    483897 6iug:D (3.9) BS01 ADP ? GO:0005524 ... B6TQ08 31628168
    483898 6iug:E (3.9) BS01 ADP ? GO:0005524 ... B6TQ08 31628168
    483899 6iui:A (2.6) BS01 peptide ? GO:0005096 ... Q9Z272 30737283
    483900 6iui:B (2.6) BS01 peptide ? GO:0005096 ... Q9Z272 30737283
    483901 6iun:A (2.38) BS01 NAD 1.1.1.35 GO:0000166 ... Q0KBG3 N/A
    483902 6iun:B (2.38) BS01 NAD 1.1.1.35 GO:0000166 ... Q0KBG3 N/A
    483903 6iuo:A (2.3) BS01 AWX 2.7.10.1 GO:0004672 ... P22455 31335138 BindingDB: IC50=>200nM
    483904 6iup:A (2.0) BS01 AX0 2.7.10.1 GO:0004672 ... P22455 31335138 MOAD: ic50=23.1nM
    BindingDB: IC50=23nM
    483905 6iuq:A (2.348) BS01 FE2 ? GO:0005506 ... A0A4P1LYH8 N/A
    483906 6iuq:B (2.348) BS01 FE2 ? GO:0005506 ... A0A4P1LYH8 N/A
    483907 6iur:F (3.33) BS01 TME ? GO:0000159 ... P30153 32589942
    483908 6iuv:C (2.332) BS01 FUC N/A N/A N/A 30737282
    483909 6iux:A (1.195) BS01 MG 3.2.2.19 GO:0000287 ... P54922 N/A
    483910 6iux:A (1.195) BS02 AR6 3.2.2.19 GO:0000287 ... P54922 N/A
    483911 6iuy:A (2.2) BS01 NAD 1.1.1.8 GO:0005975 ... Q52ZA0 31762135
    483912 6iuy:A (2.2) BS02 MG 1.1.1.8 GO:0005975 ... Q52ZA0 31762135
    483913 6iuy:B (2.2) BS01 NAD 1.1.1.8 GO:0005975 ... Q52ZA0 31762135
    483914 6iuy:B (2.2) BS02 MG 1.1.1.8 GO:0005975 ... Q52ZA0 31762135
    483915 6iv0:A (2.9) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483916 6iv0:A (2.9) BS02 ZN N/A GO:0005254 ... N/A 31263784
    483917 6iv0:B (2.9) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483918 6iv0:C (2.9) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483919 6iv0:D (2.9) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483920 6iv0:E (2.9) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483921 6iv1:A (3.18) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483922 6iv1:B (3.18) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483923 6iv1:C (3.18) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483924 6iv1:D (3.18) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483925 6iv1:E (3.18) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483926 6iv1:E (3.18) BS02 ZN N/A GO:0005254 ... N/A 31263784
    483927 6iv2:A (2.62) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483928 6iv2:A (2.62) BS02 ZN N/A GO:0005254 ... N/A 31263784
    483929 6iv2:B (2.62) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483930 6iv2:B (2.62) BS02 ZN N/A GO:0005254 ... N/A 31263784
    483931 6iv2:C (2.62) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483932 6iv2:C (2.62) BS02 ZN N/A GO:0005254 ... N/A 31263784
    483933 6iv2:D (2.62) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483934 6iv2:E (2.62) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483935 6iv3:A (2.515) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483936 6iv3:A (2.515) BS02 ZN N/A GO:0005254 ... N/A 31263784
    483937 6iv3:B (2.515) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483938 6iv3:C (2.515) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483939 6iv3:C (2.515) BS02 ZN N/A GO:0005254 ... N/A 31263784
    483940 6iv3:C (2.515) BS03 ZN N/A GO:0005254 ... N/A 31263784
    483941 6iv3:D (2.515) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483942 6iv3:D (2.515) BS02 ZN N/A GO:0005254 ... N/A 31263784
    483943 6iv3:E (2.515) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483944 6iv4:A (3.14) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483945 6iv4:B (3.14) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483946 6iv4:C (3.14) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483947 6iv4:C (3.14) BS02 ZN N/A GO:0005254 ... N/A 31263784
    483948 6iv4:D (3.14) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483949 6iv4:D (3.14) BS02 ZN N/A GO:0005254 ... N/A 31263784
    483950 6iv4:E (3.14) BS01 ZN N/A GO:0005254 ... N/A 31263784
    483951 6iv5:A (1.749) BS01 PO4 3.5.4.- GO:0005737 ... Q8LPL7 31318636
    483952 6iv5:A (1.749) BS02 ZN 3.5.4.- GO:0005737 ... Q8LPL7 31318636
    483953 6iv6:A (3.6) BS01 rna N/A N/A N/A 30936526
    483954 6iv7:A (1.937) BS01 SAH 2.1.1.- GO:0008168 ... B8NJH3 N/A
    483955 6iv7:B (1.937) BS01 SAH 2.1.1.- GO:0008168 ... B8NJH3 N/A
    483956 6iv8:A (2.15) BS01 rna ? GO:0046872 ... A0A1C5SD84 31186424
    483957 6iv8:C (2.15) BS01 rna ? GO:0046872 ... A0A1C5SD84 31186424
    483958 6iv9:A (1.86) BS01 rna ? GO:0046872 ... A0A1C5SD84 31186424
    483959 6iv9:A (1.86) BS02 MG ? GO:0046872 ... A0A1C5SD84 31186424
    483960 6ive:A (2.3) BS01 ZN ? N/A Q5SH51 30895492
    483961 6ive:A (2.3) BS02 PO4 ? N/A Q5SH51 30895492
    483962 6ive:A (2.3) BS03 PO4 ? N/A Q5SH51 30895492
    483963 6ive:B (2.3) BS01 PO4 ? N/A Q5SH51 30895492
    483964 6ive:B (2.3) BS02 ZN ? N/A Q5SH51 30895492
    483965 6ive:B (2.3) BS03 PO4 ? N/A Q5SH51 30895492
    483966 6ive:C (2.3) BS01 PO4 ? N/A Q5SH51 30895492
    483967 6ive:C (2.3) BS02 ZN ? N/A Q5SH51 30895492
    483968 6ive:D (2.3) BS01 ZN ? N/A Q5SH51 30895492
    483969 6ive:D (2.3) BS02 PO4 ? N/A Q5SH51 30895492
    483970 6ive:D (2.3) BS03 PO4 ? N/A Q5SH51 30895492
    483971 6ive:E (2.3) BS01 PO4 ? N/A Q5SH51 30895492
    483972 6ive:E (2.3) BS02 ZN ? N/A Q5SH51 30895492
    483973 6ive:E (2.3) BS03 PO4 ? N/A Q5SH51 30895492
    483974 6ive:F (2.3) BS01 PO4 ? N/A Q5SH51 30895492
    483975 6ive:F (2.3) BS02 ZN ? N/A Q5SH51 30895492
    483976 6ivj:A (2.77) BS01 ZN ? GO:0005254 ... W9BH30 31263784
    483977 6ivj:A (2.77) BS02 ZN ? GO:0005254 ... W9BH30 31263784
    483978 6ivj:B (2.77) BS01 ZN ? GO:0005254 ... W9BH30 31263784
    483979 6ivj:C (2.77) BS01 ZN ? GO:0005254 ... W9BH30 31263784
    483980 6ivj:D (2.77) BS01 ZN ? GO:0005254 ... W9BH30 31263784
    483981 6ivj:E (2.77) BS01 ZN ? GO:0005254 ... W9BH30 31263784
    483982 6ivj:E (2.77) BS02 ZN ? GO:0005254 ... W9BH30 31263784
    483983 6ivk:A (2.65) BS01 ZN ? GO:0005254 ... W9BH30 31263784
    483984 6ivk:A (2.65) BS02 ZN ? GO:0005254 ... W9BH30 31263784
    483985 6ivk:B (2.65) BS01 ZN ? GO:0005254 ... W9BH30 31263784
    483986 6ivk:C (2.65) BS01 ZN ? GO:0005254 ... W9BH30 31263784
    483987 6ivk:D (2.65) BS01 ZN ? GO:0005254 ... W9BH30 31263784
    483988 6ivk:E (2.65) BS01 ZN ? GO:0005254 ... W9BH30 31263784
    483989 6ivk:E (2.65) BS02 ZN ? GO:0005254 ... W9BH30 31263784
    483990 6ivl:A (3.4) BS01 ZN ? GO:0005254 ... W9BH30 31263784
    483991 6ivl:A (3.4) BS02 ZN ? GO:0005254 ... W9BH30 31263784
    483992 6ivl:B (3.4) BS01 ZN ? GO:0005254 ... W9BH30 31263784
    483993 6ivl:C (3.4) BS01 ZN ? GO:0005254 ... W9BH30 31263784
    483994 6ivl:C (3.4) BS02 ZN ? GO:0005254 ... W9BH30 31263784
    483995 6ivl:D (3.4) BS01 ZN ? GO:0005254 ... W9BH30 31263784
    483996 6ivl:E (3.4) BS01 ZN ? GO:0005254 ... W9BH30 31263784
    483997 6ivl:E (3.4) BS02 ZN ? GO:0005254 ... W9BH30 31263784
    483998 6ivm:A (2.95) BS01 ZN ? GO:0005254 ... W9BH30 31263784
    483999 6ivm:A (2.95) BS02 ZN ? GO:0005254 ... W9BH30 31263784
    484000 6ivm:B (2.95) BS01 ZN ? GO:0005254 ... W9BH30 31263784

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).