SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    484201 6ixx:A (1.999) BS01 CA ? GO:0004222 ... D0VMS8 N/A
    484202 6ixx:A (1.999) BS02 CA ? GO:0004222 ... D0VMS8 N/A
    484203 6ixx:A (1.999) BS03 CA ? GO:0004222 ... D0VMS8 N/A
    484204 6ixx:A (1.999) BS04 CA ? GO:0004222 ... D0VMS8 N/A
    484205 6ixx:A (1.999) BS05 CA ? GO:0004222 ... D0VMS8 N/A
    484206 6ixx:A (1.999) BS06 CA ? GO:0004222 ... D0VMS8 N/A
    484207 6ixx:A (1.999) BS07 CA ? GO:0004222 ... D0VMS8 N/A
    484208 6ixx:A (1.999) BS08 CA ? GO:0004222 ... D0VMS8 N/A
    484209 6ixx:A (1.999) BS09 ZN ? GO:0004222 ... D0VMS8 N/A
    484210 6iy1:A (2.11) BS01 GDP 3.6.5.2 GO:0003924 ... P62491 N/A
    484211 6iy1:B (2.11) BS01 GDP 3.6.5.2 GO:0003924 ... P62491 N/A
    484212 6iy1:C (2.11) BS01 GDP 3.6.5.2 GO:0003924 ... P62491 N/A
    484213 6iy1:D (2.11) BS01 GDP 3.6.5.2 GO:0003924 ... P62491 N/A
    484214 6iy1:E (2.11) BS01 GDP 3.6.5.2 GO:0003924 ... P62491 N/A
    484215 6iy1:F (2.11) BS01 GDP 3.6.5.2 GO:0003924 ... P62491 N/A
    484216 6iy2:A (3.47) BS01 dna ? GO:0000786 ... P84233 30867599
    484217 6iy2:A (3.47) BS02 dna ? GO:0000786 ... P84233 30867599
    484218 6iy2:B (3.47) BS01 dna ? GO:0003677 ... P62799 30867599
    484219 6iy2:C (3.47) BS01 dna ? GO:0000786 ... P06897 30867599
    484220 6iy2:C (3.47) BS02 dna ? GO:0000786 ... P06897 30867599
    484221 6iy2:D (3.47) BS01 dna ? GO:0000786 ... P02281 30867599
    484222 6iy2:D (3.47) BS02 dna ? GO:0000786 ... P02281 30867599
    484223 6iy2:E (3.47) BS01 dna ? GO:0000786 ... P84233 30867599
    484224 6iy2:E (3.47) BS02 dna ? GO:0000786 ... P84233 30867599
    484225 6iy2:F (3.47) BS01 dna ? GO:0003677 ... P62799 30867599
    484226 6iy2:F (3.47) BS02 dna ? GO:0003677 ... P62799 30867599
    484227 6iy2:G (3.47) BS01 dna ? GO:0000786 ... P06897 30867599
    484228 6iy2:G (3.47) BS02 dna ? GO:0000786 ... P06897 30867599
    484229 6iy2:H (3.47) BS01 dna ? GO:0000786 ... P02281 30867599
    484230 6iy2:H (3.47) BS02 dna ? GO:0000786 ... P02281 30867599
    484231 6iy2:O (3.47) BS01 dna 3.6.4.- GO:0005524 ... P22082 30867599
    484232 6iy2:O (3.47) BS02 dna 3.6.4.- GO:0005524 ... P22082 30867599
    484233 6iy2:O (3.47) BS03 ADP 3.6.4.- GO:0005524 ... P22082 30867599
    484234 6iy3:A (3.67) BS01 dna ? GO:0000786 ... P84233 30867599
    484235 6iy3:A (3.67) BS02 dna ? GO:0000786 ... P84233 30867599
    484236 6iy3:B (3.67) BS01 dna ? GO:0003677 ... P62799 30867599
    484237 6iy3:C (3.67) BS01 dna ? GO:0000786 ... P06897 30867599
    484238 6iy3:C (3.67) BS02 dna ? GO:0000786 ... P06897 30867599
    484239 6iy3:D (3.67) BS01 dna ? GO:0000786 ... P02281 30867599
    484240 6iy3:D (3.67) BS02 dna ? GO:0000786 ... P02281 30867599
    484241 6iy3:E (3.67) BS01 dna ? GO:0000786 ... P84233 30867599
    484242 6iy3:E (3.67) BS02 dna ? GO:0000786 ... P84233 30867599
    484243 6iy3:F (3.67) BS01 dna ? GO:0003677 ... P62799 30867599
    484244 6iy3:F (3.67) BS02 dna ? GO:0003677 ... P62799 30867599
    484245 6iy3:G (3.67) BS01 dna ? GO:0000786 ... P06897 30867599
    484246 6iy3:G (3.67) BS02 dna ? GO:0000786 ... P06897 30867599
    484247 6iy3:H (3.67) BS01 dna ? GO:0000786 ... P02281 30867599
    484248 6iy3:H (3.67) BS02 dna ? GO:0000786 ... P02281 30867599
    484249 6iy3:O (3.67) BS01 dna 3.6.4.- GO:0005524 ... P22082 30867599
    484250 6iy3:O (3.67) BS02 dna 3.6.4.- GO:0005524 ... P22082 30867599
    484251 6iy3:O (3.67) BS03 ADP 3.6.4.- GO:0005524 ... P22082 30867599
    484252 6iy8:A (3.42) BS01 IPH ? GO:0005524 ... Q7WSM9 32483114
    484253 6iy8:A (3.42) BS02 ZN ? GO:0005524 ... Q7WSM9 32483114
    484254 6iy8:B (3.42) BS01 ZN ? GO:0005524 ... Q7WSM9 32483114
    484255 6iy8:B (3.42) BS02 IPH ? GO:0005524 ... Q7WSM9 32483114
    484256 6iy8:C (3.42) BS01 IPH ? GO:0005524 ... Q7WSM9 32483114
    484257 6iy8:C (3.42) BS02 ZN ? GO:0005524 ... Q7WSM9 32483114
    484258 6iy8:D (3.42) BS01 IPH ? GO:0005524 ... Q7WSM9 32483114
    484259 6iy8:D (3.42) BS02 ZN ? GO:0005524 ... Q7WSM9 32483114
    484260 6iy9:A (2.4) BS01 HY0 2.7.1.119 GO:0005524 ... P09979 31475927
    484261 6iy9:B (2.4) BS01 HY0 2.7.1.119 GO:0005524 ... P09979 31475927
    484262 6iyb:A (2.091) BS01 MG 3.6.5.2 GO:0000045 ... P51149 30721249
    484263 6iyb:A (2.091) BS02 GTP 3.6.5.2 GO:0000045 ... P51149 30721249
    484264 6iyb:C (2.091) BS01 MG 3.6.5.2 GO:0000045 ... P51149 30721249
    484265 6iyb:C (2.091) BS02 GTP 3.6.5.2 GO:0000045 ... P51149 30721249
    484266 6iyc:C (2.6) BS01 CLR ? GO:0000139 ... Q96BI3 30630874
    484267 6iyc:C (2.6) BS02 CLR ? GO:0000139 ... Q96BI3 30630874
    484268 6iyc:C (2.6) BS03 CLR ? GO:0000139 ... Q96BI3 30630874
    484269 6iyf:A (1.764) BS01 2BA ? GO:0002218 ... B8XX90 31167783
    484270 6iyf:B (1.764) BS01 2BA ? GO:0002218 ... B8XX90 31167783 MOAD: Kd~6uM
    484271 6iyg:A (1.5) BS01 GLC 3.2.1.60 GO:0004556 ... P22963 N/A
    484272 6iyg:A (1.5) BS02 GLC 3.2.1.60 GO:0004556 ... P22963 N/A
    484273 6iyg:A (1.5) BS03 GLC 3.2.1.60 GO:0004556 ... P22963 N/A
    484274 6iyg:A (1.5) BS04 GLC 3.2.1.60 GO:0004556 ... P22963 N/A
    484275 6iyg:A (1.5) BS05 CA 3.2.1.60 GO:0004556 ... P22963 N/A
    484276 6iyg:A (1.5) BS06 CA 3.2.1.60 GO:0004556 ... P22963 N/A
    484277 6iyh:A (1.7) BS01 HEM ? GO:0004601 ... A0A1X8XL85 30904680
    484278 6iyh:B (1.7) BS01 HEM ? GO:0004601 ... A0A1X8XL86 30904680
    484279 6iyi:A (2.2) BS01 HEM ? GO:0004601 ... A0A1Z0YU11 30904680
    484280 6iyi:B (2.2) BS01 HEM ? GO:0004601 ... A0A1Z0YU12 30904680
    484281 6iyk:A (2.45) BS01 B1U 6.2.1.71
    6.3.2.14
    GO:0005515 ... P10378 30945421 MOAD: Ki=50nM
    484282 6iyk:B (2.45) BS01 B1U 6.2.1.71
    6.3.2.14
    GO:0005515 ... P10378 30945421 MOAD: Ki=50nM
    484283 6iyl:A (2.56) BS01 B1X 6.2.1.71
    6.3.2.14
    GO:0005515 ... P10378 30945421
    484284 6iyl:B (2.56) BS01 B1X 6.2.1.71
    6.3.2.14
    GO:0005515 ... P10378 30945421
    484285 6iym:A (2.1) BS01 MG N/A GO:0003824 ... N/A 30630595
    484286 6iym:B (2.1) BS01 MG N/A GO:0003824 ... N/A 30630595
    484287 6iyv:A (1.5) BS01 2RG 2.3.2.- GO:0016740 ... I6Y9J2 30686533
    484288 6iyv:B (1.5) BS01 2RG 2.3.2.- GO:0016740 ... I6Y9J2 30686533
    484289 6iyw:A (1.6) BS01 IM2 2.3.2.- GO:0016740 ... I6Y9J2 30686533
    484290 6iyw:B (1.6) BS01 IM2 2.3.2.- GO:0016740 ... I6Y9J2 30686533
    484291 6iyw:C (1.6) BS01 IM2 2.3.2.- GO:0016740 ... I6Y9J2 30686533
    484292 6iyw:D (1.6) BS01 IM2 2.3.2.- GO:0016740 ... I6Y9J2 30686533
    484293 6iyw:E (1.6) BS01 IM2 2.3.2.- GO:0016740 ... I6Y9J2 30686533
    484294 6iyw:F (1.6) BS01 IM2 2.3.2.- GO:0016740 ... I6Y9J2 30686533
    484295 6iz2:A (2.069) BS01 ZN ? GO:0046872 ... Q9RY97 30961930
    484296 6iz2:A (2.069) BS02 ZN ? GO:0046872 ... Q9RY97 30961930
    484297 6iz2:B (2.069) BS01 ZN ? GO:0046872 ... Q9RY97 30961930
    484298 6iz2:B (2.069) BS02 ZN ? GO:0046872 ... Q9RY97 30961930
    484299 6iz8:C (2.7) BS01 peptide ? N/A Q9I756 30659530
    484300 6izf:A (2.0) BS01 BQ9 ? GO:0005267 ... Q5ZK43 30770441
    484301 6izj:A (2.1) BS01 NO3 ? N/A A0A0H3JU14 31970556
    484302 6izm:A (1.8) BS01 peptide ? GO:0003677 ... P37231 30891140
    484303 6izm:A (1.8) BS02 B0X ? GO:0003677 ... P37231 30891140
    484304 6izn:A (1.75) BS01 peptide ? GO:0003677 ... P37231 30891140
    484305 6izn:A (1.75) BS02 B1O ? GO:0003677 ... P37231 30891140
    484306 6izq:A (2.449) BS01 XJ2 2.1.1.319 GO:0016274 ... Q86X55 31117515 MOAD: ic50=3.19uM
    BindingDB: IC50=3190nM
    484307 6izr:1 (4.7) BS01 ADP N/A N/A N/A 31253774
    484308 6izr:1 (4.7) BS02 MG N/A N/A N/A 31253774
    484309 6izr:2 (4.7) BS01 ADP N/A N/A N/A 31253774
    484310 6izr:2 (4.7) BS02 MG N/A N/A N/A 31253774
    484311 6izr:A (4.7) BS01 ADP N/A N/A N/A 31253774
    484312 6izr:A (4.7) BS02 MG N/A N/A N/A 31253774
    484313 6izr:B (4.7) BS01 ADP N/A N/A N/A 31253774
    484314 6izr:B (4.7) BS02 MG N/A N/A N/A 31253774
    484315 6izr:D (4.7) BS01 ADP N/A N/A N/A 31253774
    484316 6izr:D (4.7) BS02 MG N/A N/A N/A 31253774
    484317 6izr:E (4.7) BS01 ADP N/A N/A N/A 31253774
    484318 6izr:G (4.7) BS01 ADP N/A N/A N/A 31253774
    484319 6izr:H (4.7) BS01 ADP N/A N/A N/A 31253774
    484320 6izr:H (4.7) BS02 MG N/A N/A N/A 31253774
    484321 6izr:J (4.7) BS01 ADP N/A N/A N/A 31253774
    484322 6izr:J (4.7) BS02 MG N/A N/A N/A 31253774
    484323 6izr:K (4.7) BS01 ADP N/A N/A N/A 31253774
    484324 6izr:K (4.7) BS02 MG N/A N/A N/A 31253774
    484325 6izr:M (4.7) BS01 ADP N/A N/A N/A 31253774
    484326 6izr:M (4.7) BS02 MG N/A N/A N/A 31253774
    484327 6izr:N (4.7) BS01 ADP N/A N/A N/A 31253774
    484328 6izr:P (4.7) BS01 ADP N/A N/A N/A 31253774
    484329 6izr:Q (4.7) BS01 ADP N/A N/A N/A 31253774
    484330 6izr:Q (4.7) BS02 MG N/A N/A N/A 31253774
    484331 6izr:b (4.7) BS01 ADP N/A N/A N/A 31253774
    484332 6izr:b (4.7) BS02 MG N/A N/A N/A 31253774
    484333 6izr:c (4.7) BS01 ADP N/A N/A N/A 31253774
    484334 6izr:c (4.7) BS02 MG N/A N/A N/A 31253774
    484335 6izr:e (4.7) BS01 ADP N/A N/A N/A 31253774
    484336 6izr:e (4.7) BS02 MG N/A N/A N/A 31253774
    484337 6izr:f (4.7) BS01 ADP N/A N/A N/A 31253774
    484338 6izr:f (4.7) BS02 MG N/A N/A N/A 31253774
    484339 6izr:h (4.7) BS01 ADP N/A N/A N/A 31253774
    484340 6izr:h (4.7) BS02 MG N/A N/A N/A 31253774
    484341 6izr:i (4.7) BS01 ADP N/A N/A N/A 31253774
    484342 6izr:i (4.7) BS02 MG N/A N/A N/A 31253774
    484343 6izr:k (4.7) BS01 ADP N/A N/A N/A 31253774
    484344 6izr:l (4.7) BS01 ADP N/A N/A N/A 31253774
    484345 6izr:l (4.7) BS02 MG N/A N/A N/A 31253774
    484346 6izr:n (4.7) BS01 ADP N/A N/A N/A 31253774
    484347 6izr:n (4.7) BS02 MG N/A N/A N/A 31253774
    484348 6izr:o (4.7) BS01 ADP N/A N/A N/A 31253774
    484349 6izr:q (4.7) BS01 ADP N/A N/A N/A 31253774
    484350 6izr:q (4.7) BS02 MG N/A N/A N/A 31253774
    484351 6izr:r (4.7) BS01 ADP N/A N/A N/A 31253774
    484352 6izr:r (4.7) BS02 MG N/A N/A N/A 31253774
    484353 6izr:t (4.7) BS01 ADP N/A N/A N/A 31253774
    484354 6izr:t (4.7) BS02 MG N/A N/A N/A 31253774
    484355 6izr:u (4.7) BS01 ADP N/A N/A N/A 31253774
    484356 6izr:u (4.7) BS02 MG N/A N/A N/A 31253774
    484357 6izr:w (4.7) BS01 ADP N/A N/A N/A 31253774
    484358 6izr:w (4.7) BS02 MG N/A N/A N/A 31253774
    484359 6izr:x (4.7) BS01 ADP N/A N/A N/A 31253774
    484360 6izr:x (4.7) BS02 MG N/A N/A N/A 31253774
    484361 6izv:0 (4.2) BS01 ADP N/A N/A N/A 31253774
    484362 6izv:0 (4.2) BS02 MG N/A N/A N/A 31253774
    484363 6izv:1 (4.2) BS01 ADP N/A N/A N/A 31253774
    484364 6izv:1 (4.2) BS02 MG N/A N/A N/A 31253774
    484365 6izw:A (2.4) BS01 GSP 3.6.5.2 GO:0003924 ... Q1DB04 31560685
    484366 6izw:A (2.4) BS02 MG 3.6.5.2 GO:0003924 ... Q1DB04 31560685
    484367 6izx:A (2.43) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... P14340 31738758
    484368 6izx:A (2.43) BS02 CO 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... P14340 31738758
    484369 6izx:A (2.43) BS03 CO 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... P14340 31738758
    484370 6izx:A (2.43) BS04 CO 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... P14340 31738758
    484371 6izx:A (2.43) BS05 CO 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... P14340 31738758
    484372 6izx:A (2.43) BS06 B5C 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... P14340 31738758
    484373 6izx:A (2.43) BS07 B5C 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... P14340 31738758
    484374 6izy:A (2.11) BS01 CO 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... P14340 31738758
    484375 6izy:A (2.11) BS02 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... P14340 31738758
    484376 6izz:A (1.97) BS01 ZN 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q5I3C1 31738758
    484377 6izz:A (1.97) BS02 ZN 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q5I3C1 31738758
    484378 6izz:A (1.97) BS03 B5C 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q5I3C1 31738758
    484379 6j00:A (2.14) BS01 ZN 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q5I3C1 31738758
    484380 6j00:A (2.14) BS02 ZN 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q5I3C1 31738758
    484381 6j02:A (1.803) BS01 CA ? GO:0016020 ... P30204 31653705
    484382 6j02:B (1.803) BS01 CA ? GO:0016020 ... P30204 31653705
    484383 6j03:A (1.48) BS01 0HZ ? GO:0046872 ... V5TER4 N/A
    484384 6j03:A (1.48) BS02 CA ? GO:0046872 ... V5TER4 N/A
    484385 6j06:A (2.65) BS01 99C ? N/A O00481 30902636
    484386 6j06:A (2.65) BS02 99C ? N/A O00481 30902636
    484387 6j06:B (2.65) BS01 99C ? N/A O00481 30902636
    484388 6j06:B (2.65) BS02 CA ? N/A O00481 30902636
    484389 6j06:C (2.65) BS01 99C ? N/A O00481 30902636
    484390 6j06:C (2.65) BS02 99C ? N/A O00481 30902636
    484391 6j07:B (3.298) BS01 ZN ? GO:0070197 ... Q8NA31 30718482
    484392 6j0d:A (1.9) BS01 ZN ? GO:0003677 ... Q653D5 31278262
    484393 6j0d:A (1.9) BS02 ZN ? GO:0003677 ... Q653D5 31278262
    484394 6j0g:A (1.6) BS01 H6P ? N/A O00478 30902636 MOAD: Kd=2.3uM
    484395 6j0g:B (1.6) BS01 H6P ? N/A O00478 30902636 MOAD: Kd=2.3uM
    484396 6j0g:C (1.6) BS01 H6P ? N/A O00478 30902636 MOAD: Kd=2.3uM
    484397 6j0g:D (1.6) BS01 H6P ? N/A O00478 30902636 MOAD: Kd=2.3uM
    484398 6j0k:A (2.0) BS01 H6P ? N/A O00478 30902636
    484399 6j0k:B (2.0) BS01 H6P ? N/A O00478 30902636
    484400 6j0o:A (1.8) BS01 XAF ? GO:0008289 ... Q9Y5P4 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).