SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    484401 6j0p:A (1.79) BS01 COA ? GO:0003824 ... O67224 31646188
    484402 6j0p:B (1.79) BS01 COA ? GO:0003824 ... O67224 31646188
    484403 6j0w:A (2.4) BS01 peptide ? N/A P38850 31348879
    484404 6j0w:B (2.4) BS01 peptide ? N/A P38850 31348879
    484405 6j0x:A (2.31) BS01 peptide ? N/A P38850 31348879
    484406 6j0x:B (2.31) BS01 peptide ? N/A P38850 31348879
    484407 6j0x:C (2.31) BS01 peptide ? N/A P38850 31348879
    484408 6j0x:D (2.31) BS01 peptide ? N/A P38850 31348879
    484409 6j0z:C (2.889) BS01 FAD ? GO:0000166 ... Q6VMI4 30739782
    484410 6j10:B (2.3) BS01 B4O ? GO:0005198 ... P03147 31097716 MOAD: Kd=445nM
    484411 6j10:D (2.3) BS01 B4O ? GO:0005198 ... P03147 31097716 MOAD: Kd=445nM
    484412 6j10:F (2.3) BS01 B4O ? GO:0005198 ... P03147 31097716 MOAD: Kd=445nM
    484413 6j11:A (3.0) BS01 MAN ? N/A K9N5Q8 31296843
    484414 6j11:B (3.0) BS01 MAN ? N/A K9N5Q8 31296843
    484415 6j11:C (3.0) BS01 MAN ? N/A K9N5Q8 31296843
    484416 6j11:F (3.0) BS01 MAN N/A N/A N/A 31296843
    484417 6j15:C (2.6) BS01 FUC ? GO:0016020 ... Q15116 30952089
    484418 6j15:D (2.6) BS01 FUC ? GO:0016020 ... Q15116 30952089
    484419 6j17:A (1.975) BS01 ATP ? N/A P9WNA9 31758528
    484420 6j18:A (2.0) BS01 ATP ? GO:0000166 ... P9WNA5 31758528
    484421 6j19:A (1.978) BS01 peptide ? GO:0000166 ... P9WNB1 31758528
    484422 6j19:A (1.978) BS02 ATP ? GO:0000166 ... P9WNB1 31758528
    484423 6j1e:A (2.4) BS01 COA ? GO:0003824 ... O67224 31646188
    484424 6j1f:A (2.1) BS01 COA ? GO:0003824 ... O67224 31646188
    484425 6j1f:A (2.1) BS02 THG ? GO:0003824 ... O67224 31646188
    484426 6j1f:B (2.1) BS01 COA ? GO:0003824 ... O67224 31646188
    484427 6j1g:A (2.5) BS01 COA ? GO:0003824 ... O67224 31646188
    484428 6j1i:A (2.29) BS01 COA ? GO:0003824 ... O67224 31646188
    484429 6j1j:A (2.0) BS01 COA ? GO:0003824 ... O67224 31646188
    484430 6j1j:A (2.0) BS02 THG ? GO:0003824 ... O67224 31646188
    484431 6j1l:A (2.3) BS01 B6L ? GO:0003677 ... P51449 30964293 BindingDB: IC50=750nM, Kd=380nM
    484432 6j1l:B (2.3) BS01 B6L ? GO:0003677 ... P51449 30964293 BindingDB: IC50=750nM, Kd=380nM
    484433 6j1l:C (2.3) BS01 B6L ? GO:0003677 ... P51449 30964293 BindingDB: IC50=750nM, Kd=380nM
    484434 6j1m:A (2.001) BS01 6JN N/A GO:0009058 ... N/A 31492848
    484435 6j1m:B (2.001) BS01 6JN N/A GO:0009058 ... N/A 31492848
    484436 6j1n:A (2.532) BS01 B7X N/A GO:0009058 ... N/A 31492848
    484437 6j1n:B (2.532) BS01 B7X N/A GO:0009058 ... N/A 31492848
    484438 6j1o:A (1.7) BS01 SAM 2.1.1.- GO:0008168 ... B8NJH3 31149354
    484439 6j1o:A (1.7) BS02 MTA 2.1.1.- GO:0008168 ... B8NJH3 31149354
    484440 6j1o:B (1.7) BS01 SAM 2.1.1.- GO:0008168 ... B8NJH3 31149354
    484441 6j1t:A (1.783) BS01 B7U 3.1.1.3 GO:0004806 ... P41365 31023008
    484442 6j1u:A (2.8) BS01 B7O ? GO:0003723 ... P15682 33627391
    484443 6j1u:A (2.8) BS02 B7O ? GO:0003723 ... P15682 33627391
    484444 6j1u:C (2.8) BS01 B7O ? GO:0003723 ... P15682 33627391
    484445 6j1v:A (2.0) BS01 peptide ? N/A A0A173ADK6 31396224
    484446 6j1w:A (1.501) BS01 peptide ? N/A P04439 31396224
    484447 6j20:A (2.7) BS01 GBQ 3.2.1.17 GO:0003796 ... P00720
    P25103
    30733446
    484448 6j21:A (3.2) BS01 GBQ 3.2.1.17 GO:0003796 ... P00720
    P25103
    30733446
    484449 6j23:A (1.9) BS01 5GP 3.5.4.- GO:0005737 ... Q8LPL7 31318636
    484450 6j23:A (1.9) BS02 ZN 3.5.4.- GO:0005737 ... Q8LPL7 31318636
    484451 6j24:A (2.244) BS01 BYO 2.1.1.- GO:0008168 ... B8NJH3 31149354
    484452 6j24:A (2.244) BS02 SAM 2.1.1.- GO:0008168 ... B8NJH3 31149354
    484453 6j24:B (2.244) BS01 BYO 2.1.1.- GO:0008168 ... B8NJH3 31149354
    484454 6j24:B (2.244) BS02 SAM 2.1.1.- GO:0008168 ... B8NJH3 31149354
    484455 6j24:B (2.244) BS03 BYO 2.1.1.- GO:0008168 ... B8NJH3 31149354
    484456 6j26:A (2.0) BS01 MTA 2.5.1.128 GO:0005737 ... Q5JIZ3 31162806
    484457 6j26:A (2.0) BS02 B5L 2.5.1.128 GO:0005737 ... Q5JIZ3 31162806
    484458 6j26:A (2.0) BS03 FE 2.5.1.128 GO:0005737 ... Q5JIZ3 31162806
    484459 6j26:B (2.0) BS01 FE 2.5.1.128 GO:0005737 ... Q5JIZ3 31162806
    484460 6j26:B (2.0) BS02 MTA 2.5.1.128 GO:0005737 ... Q5JIZ3 31162806
    484461 6j26:B (2.0) BS03 B5L 2.5.1.128 GO:0005737 ... Q5JIZ3 31162806
    484462 6j27:A (1.66) BS01 FE 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484463 6j27:A (1.66) BS02 MTA 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484464 6j27:A (1.66) BS03 N4P 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484465 6j27:B (1.66) BS01 FE 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484466 6j27:B (1.66) BS02 MTA 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484467 6j27:B (1.66) BS03 N4P 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484468 6j27:C (1.66) BS01 FE 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484469 6j27:C (1.66) BS02 MTA 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484470 6j27:C (1.66) BS03 N4P 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484471 6j27:D (1.66) BS01 FE 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484472 6j27:D (1.66) BS02 MTA 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484473 6j27:D (1.66) BS03 N4P 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484474 6j28:A (1.9) BS01 N4P 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484475 6j28:A (1.9) BS02 MTA 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484476 6j28:A (1.9) BS03 FE 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484477 6j28:B (1.9) BS01 N4P 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484478 6j28:B (1.9) BS02 MTA 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484479 6j28:B (1.9) BS03 FE 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484480 6j28:C (1.9) BS01 FE 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484481 6j28:C (1.9) BS02 N4P 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484482 6j28:C (1.9) BS03 MTA 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484483 6j28:D (1.9) BS01 FE 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484484 6j28:D (1.9) BS02 N4P 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484485 6j28:D (1.9) BS03 MTA 2.5.1.128 GO:0005737 ... Q72L89 31162806
    484486 6j29:A (1.6) BS01 peptide ? N/A P04439 31396224
    484487 6j2a:A (1.4) BS01 peptide ? N/A P04439 31396224
    484488 6j2b:A (1.44) BS01 TSL 3.5.2.6 GO:0008800 ... C8CP57 31709791
    484489 6j2b:B (1.44) BS01 TSL 3.5.2.6 GO:0008800 ... C8CP57 31709791
    484490 6j2c:R (7.0) BS01 peptide ? GO:0000502 ... Q06103 30792173
    484491 6j2c:S (7.0) BS01 peptide ? GO:0000502 ... P40016 30792173
    484492 6j2d:A (2.313) BS01 peptide ? N/A A0A125R585 31498797
    484493 6j2e:A (2.1) BS01 peptide ? N/A A0A125R585 31498797
    484494 6j2e:D (2.1) BS01 peptide ? N/A A0A125R585 31498797
    484495 6j2f:A (1.9) BS01 peptide ? N/A A0A125R585 31498797
    484496 6j2f:D (1.9) BS01 peptide ? N/A A0A125R585 31498797
    484497 6j2g:A (2.41) BS01 peptide ? N/A A0A125R585 31498797
    484498 6j2g:D (2.41) BS01 peptide ? N/A A0A125R585 31498797
    484499 6j2h:A (2.3) BS01 peptide ? N/A A0A125R585 31498797
    484500 6j2h:D (2.3) BS01 peptide ? N/A A0A125R585 31498797
    484501 6j2i:A (2.3) BS01 peptide ? N/A A0A125R585 31498797
    484502 6j2i:D (2.3) BS01 peptide ? N/A A0A125R585 31498797
    484503 6j2j:A (2.5) BS01 peptide ? N/A A0A125R585 31498797
    484504 6j2j:D (2.5) BS01 peptide ? N/A A0A125R585 31498797
    484505 6j2k:A (1.44) BS01 ISS 3.5.2.6 GO:0008800 ... C8CP57 31709791
    484506 6j2k:B (1.44) BS01 ISS 3.5.2.6 GO:0008800 ... C8CP57 31709791
    484507 6j2l:A (2.17) BS01 ZN 3.5.4.19
    3.6.1.31
    GO:0000105 ... P37793 31235255
    484508 6j2l:A (2.17) BS02 ZN 3.5.4.19
    3.6.1.31
    GO:0000105 ... P37793 31235255
    484509 6j2l:A (2.17) BS03 ZN 3.5.4.19
    3.6.1.31
    GO:0000105 ... P37793 31235255
    484510 6j2l:B (2.17) BS01 MG 3.5.4.19
    3.6.1.31
    GO:0000105 ... P37793 31235255
    484511 6j2l:B (2.17) BS02 ZN 3.5.4.19
    3.6.1.31
    GO:0000105 ... P37793 31235255
    484512 6j2m:A (1.13) BS01 FK5 5.2.1.8 GO:0003755 ... Q93ZG9 31807785
    484513 6j2n:R (7.5) BS01 peptide ? GO:0000502 ... Q06103 30792173
    484514 6j2n:S (7.5) BS01 peptide ? GO:0000502 ... P40016 30792173
    484515 6j2o:A (1.9) BS01 ISS 3.5.2.6 GO:0008800 ... C8CP57 31709791
    484516 6j2o:B (1.9) BS01 ISS 3.5.2.6 GO:0008800 ... C8CP57 31709791
    484517 6j2p:A (2.85) BS01 peptide ? GO:0048188 ... Q03012 31253666
    484518 6j2p:A (2.85) BS02 ZN ? GO:0048188 ... Q03012 31253666
    484519 6j2p:A (2.85) BS03 ZN ? GO:0048188 ... Q03012 31253666
    484520 6j2p:A (2.85) BS04 ZN ? GO:0048188 ... Q03012 31253666
    484521 6j2p:B (2.85) BS01 peptide ? GO:0048188 ... Q03012 31253666
    484522 6j2p:B (2.85) BS02 ZN ? GO:0048188 ... Q03012 31253666
    484523 6j2p:B (2.85) BS03 ZN ? GO:0048188 ... Q03012 31253666
    484524 6j2p:B (2.85) BS04 ZN ? GO:0048188 ... Q03012 31253666
    484525 6j2p:C (2.85) BS01 peptide ? GO:0048188 ... Q03012 31253666
    484526 6j2p:C (2.85) BS02 ZN ? GO:0048188 ... Q03012 31253666
    484527 6j2p:C (2.85) BS03 ZN ? GO:0048188 ... Q03012 31253666
    484528 6j2p:C (2.85) BS04 ZN ? GO:0048188 ... Q03012 31253666
    484529 6j2p:D (2.85) BS01 peptide ? GO:0048188 ... Q03012 31253666
    484530 6j2p:D (2.85) BS02 ZN ? GO:0048188 ... Q03012 31253666
    484531 6j2p:D (2.85) BS03 ZN ? GO:0048188 ... Q03012 31253666
    484532 6j2p:D (2.85) BS04 ZN ? GO:0048188 ... Q03012 31253666
    484533 6j2q:R (3.8) BS01 peptide ? GO:0000502 ... Q06103 30792173
    484534 6j2q:S (3.8) BS01 peptide ? GO:0000502 ... P40016 30792173
    484535 6j2s:A (1.73005) BS01 GA ? GO:0005615 ... Q9HVA8 31475514
    484536 6j2s:B (1.73005) BS01 GA ? GO:0005615 ... Q9HVA8 31475514
    484537 6j2u:B (1.3) BS01 ZN ? GO:0016491 ... Q93HL2 N/A
    484538 6j2u:B (1.3) BS02 ZN ? GO:0016491 ... Q93HL2 N/A
    484539 6j2v:A (1.9) BS01 PLZ 2.6.1.19 GO:0008483 ... Q8NT35 31072617
    484540 6j2v:A (1.9) BS02 PLZ 2.6.1.19 GO:0008483 ... Q8NT35 31072617
    484541 6j2v:B (1.9) BS01 PLZ 2.6.1.19 GO:0008483 ... Q8NT35 31072617
    484542 6j2v:B (1.9) BS02 PLZ 2.6.1.19 GO:0008483 ... Q8NT35 31072617
    484543 6j2v:C (1.9) BS01 PLZ 2.6.1.19 GO:0008483 ... Q8NT35 31072617
    484544 6j2v:C (1.9) BS02 PLZ 2.6.1.19 GO:0008483 ... Q8NT35 31072617
    484545 6j2v:D (1.9) BS01 PLZ 2.6.1.19 GO:0008483 ... Q8NT35 31072617
    484546 6j2v:D (1.9) BS02 PLZ 2.6.1.19 GO:0008483 ... Q8NT35 31072617
    484547 6j2x:R (3.8) BS01 peptide ? GO:0000502 ... Q06103 30792173
    484548 6j2x:S (3.8) BS01 peptide ? GO:0000502 ... P40016 30792173
    484549 6j30:R (4.5) BS01 peptide ? GO:0000502 ... Q06103 30792173
    484550 6j30:S (4.5) BS01 peptide ? GO:0000502 ... P40016 30792173
    484551 6j31:A (2.244) BS01 peptide ? GO:0008194 ... A0A514S208 31160959
    484552 6j31:B (2.244) BS01 peptide ? GO:0008194 ... A0A514S208 31160959
    484553 6j31:C (2.244) BS01 peptide ? GO:0008194 ... A0A514S208 31160959
    484554 6j31:D (2.244) BS01 peptide ? GO:0008194 ... A0A514S208 31160959
    484555 6j33:A (1.297) BS01 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484556 6j33:A (1.297) BS02 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484557 6j33:A (1.297) BS03 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484558 6j33:A (1.297) BS04 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484559 6j33:A (1.297) BS05 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484560 6j33:A (1.297) BS06 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484561 6j33:A (1.297) BS07 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484562 6j33:B (1.297) BS01 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484563 6j33:B (1.297) BS02 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484564 6j33:B (1.297) BS03 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484565 6j33:B (1.297) BS04 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484566 6j33:B (1.297) BS05 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484567 6j33:B (1.297) BS06 CA 3.2.1.41 GO:0004553 ... N/A 31478902
    484568 6j34:A (1.498) BS01 GLC 3.2.1.41 GO:0004553 ... N/A 31478902
    484569 6j34:A (1.498) BS02 GLC 3.2.1.41 GO:0004553 ... N/A 31478902
    484570 6j34:A (1.498) BS03 GLC 3.2.1.41 GO:0004553 ... N/A 31478902
    484571 6j34:A (1.498) BS04 GLC 3.2.1.41 GO:0004553 ... N/A 31478902
    484572 6j34:A (1.498) BS05 GLC 3.2.1.41 GO:0004553 ... N/A 31478902
    484573 6j34:A (1.498) BS06 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484574 6j34:A (1.498) BS07 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484575 6j34:A (1.498) BS08 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484576 6j35:A (1.839) BS01 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484577 6j35:A (1.839) BS02 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484578 6j35:A (1.839) BS03 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484579 6j35:A (1.839) BS04 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484580 6j35:B (1.839) BS01 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484581 6j35:B (1.839) BS02 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484582 6j35:B (1.839) BS03 MG 3.2.1.41 GO:0004553 ... N/A 31478902
    484583 6j35:B (1.839) BS04 CA 3.2.1.41 GO:0004553 ... N/A 31478902
    484584 6j38:A (2.3) BS01 FAD ? GO:0000166 ... X5IYZ1 31154757
    484585 6j38:B (2.3) BS01 FAD ? GO:0000166 ... X5IYZ1 31154757
    484586 6j39:A (2.45) BS01 FAD ? GO:0000166 ... X5IYZ1 31154757
    484587 6j39:A (2.45) BS02 B6X ? GO:0000166 ... X5IYZ1 31154757 MOAD: Ki=6uM
    484588 6j39:B (2.45) BS01 FAD ? GO:0000166 ... X5IYZ1 31154757
    484589 6j39:B (2.45) BS02 B6X ? GO:0000166 ... X5IYZ1 31154757 MOAD: Ki=6uM
    484590 6j3b:A (1.6) BS01 FMN 1.3.5.2 GO:0004151 ... Q02127 31087527
    484591 6j3b:A (1.6) BS02 B5O 1.3.5.2 GO:0004151 ... Q02127 31087527 MOAD: ic50=171nM
    484592 6j3c:A (1.851) BS01 FMN 1.3.5.2 GO:0004151 ... Q02127 31087527
    484593 6j3c:A (1.851) BS02 B5X 1.3.5.2 GO:0004151 ... Q02127 31087527 MOAD: ic50=39nM
    484594 6j3d:A (1.7) BS01 ZN 4.1.1.5 GO:0016831 ... E0U503 N/A
    484595 6j3d:B (1.7) BS01 ZN 4.1.1.5 GO:0016831 ... E0U503 N/A
    484596 6j3f:A (2.5) BS01 GSH ? GO:0005737 ... M2R618 30683313
    484597 6j3f:B (2.5) BS01 GSH ? GO:0005737 ... M2R618 30683313
    484598 6j3h:A (2.19) BS01 GSH ? N/A M2QJS8 30928378
    484599 6j3h:B (2.19) BS01 GSH ? N/A M2QJS8 30928378
    484600 6j3h:C (2.19) BS01 GSH ? N/A M2QJS8 30928378

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).