SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    48401 1rwt:H (2.72) BS05 CLA ? GO:0009765 ... P12333 15029188
    48402 1rwt:H (2.72) BS06 CLA ? GO:0009765 ... P12333 15029188
    48403 1rwt:H (2.72) BS07 CHL ? GO:0009765 ... P12333 15029188
    48404 1rwt:H (2.72) BS08 CHL ? GO:0009765 ... P12333 15029188
    48405 1rwt:H (2.72) BS09 CHL ? GO:0009765 ... P12333 15029188
    48406 1rwt:H (2.72) BS10 CHL ? GO:0009765 ... P12333 15029188
    48407 1rwt:H (2.72) BS11 CHL ? GO:0009765 ... P12333 15029188
    48408 1rwt:H (2.72) BS12 CLA ? GO:0009765 ... P12333 15029188
    48409 1rwt:H (2.72) BS13 CLA ? GO:0009765 ... P12333 15029188
    48410 1rwt:H (2.72) BS14 CLA ? GO:0009765 ... P12333 15029188
    48411 1rwt:H (2.72) BS15 CLA ? GO:0009765 ... P12333 15029188
    48412 1rwt:H (2.72) BS16 CLA ? GO:0009765 ... P12333 15029188
    48413 1rwt:I (2.72) BS01 CHL ? GO:0009765 ... P12333 15029188
    48414 1rwt:I (2.72) BS02 CHL ? GO:0009765 ... P12333 15029188
    48415 1rwt:I (2.72) BS03 CHL ? GO:0009765 ... P12333 15029188
    48416 1rwt:I (2.72) BS04 CLA ? GO:0009765 ... P12333 15029188
    48417 1rwt:I (2.72) BS05 CLA ? GO:0009765 ... P12333 15029188
    48418 1rwt:I (2.72) BS06 CLA ? GO:0009765 ... P12333 15029188
    48419 1rwt:I (2.72) BS07 CHL ? GO:0009765 ... P12333 15029188
    48420 1rwt:I (2.72) BS08 CHL ? GO:0009765 ... P12333 15029188
    48421 1rwt:I (2.72) BS09 CHL ? GO:0009765 ... P12333 15029188
    48422 1rwt:I (2.72) BS10 CHL ? GO:0009765 ... P12333 15029188
    48423 1rwt:I (2.72) BS11 CHL ? GO:0009765 ... P12333 15029188
    48424 1rwt:I (2.72) BS12 CLA ? GO:0009765 ... P12333 15029188
    48425 1rwt:I (2.72) BS13 CLA ? GO:0009765 ... P12333 15029188
    48426 1rwt:I (2.72) BS14 CLA ? GO:0009765 ... P12333 15029188
    48427 1rwt:I (2.72) BS15 CLA ? GO:0009765 ... P12333 15029188
    48428 1rwt:I (2.72) BS16 CLA ? GO:0009765 ... P12333 15029188
    48429 1rwt:J (2.72) BS01 CHL ? GO:0009765 ... P12333 15029188
    48430 1rwt:J (2.72) BS02 CHL ? GO:0009765 ... P12333 15029188
    48431 1rwt:J (2.72) BS03 CHL ? GO:0009765 ... P12333 15029188
    48432 1rwt:J (2.72) BS04 CLA ? GO:0009765 ... P12333 15029188
    48433 1rwt:J (2.72) BS05 CLA ? GO:0009765 ... P12333 15029188
    48434 1rwt:J (2.72) BS06 CLA ? GO:0009765 ... P12333 15029188
    48435 1rwt:J (2.72) BS07 CHL ? GO:0009765 ... P12333 15029188
    48436 1rwt:J (2.72) BS08 CHL ? GO:0009765 ... P12333 15029188
    48437 1rwt:J (2.72) BS09 CHL ? GO:0009765 ... P12333 15029188
    48438 1rwt:J (2.72) BS10 CHL ? GO:0009765 ... P12333 15029188
    48439 1rwt:J (2.72) BS11 CHL ? GO:0009765 ... P12333 15029188
    48440 1rwt:J (2.72) BS12 CLA ? GO:0009765 ... P12333 15029188
    48441 1rwt:J (2.72) BS13 CLA ? GO:0009765 ... P12333 15029188
    48442 1rwt:J (2.72) BS14 CLA ? GO:0009765 ... P12333 15029188
    48443 1rwt:J (2.72) BS15 CLA ? GO:0009765 ... P12333 15029188
    48444 1rwt:J (2.72) BS16 CLA ? GO:0009765 ... P12333 15029188
    48445 1rwv:A (2.1) BS01 5PH 3.4.22.36 GO:0004197 ... P29466 N/A
    48446 1rwv:B (2.1) BS01 5PH 3.4.22.36 GO:0004197 ... P29466 N/A
    48447 1rww:A (2.8) BS01 OQB 3.4.22.36 GO:0004197 ... P29466 16274992 BindingDB: IC50=5nM, Ki=5nM
    48448 1rww:B (2.8) BS01 OQB 3.4.22.36 GO:0004197 ... P29466 16274992 BindingDB: IC50=5nM, Ki=5nM
    48449 1rwx:A (1.85) BS01 YBH 3.4.22.36 GO:0004197 ... P29466 16274992
    48450 1rwx:B (1.85) BS01 YBH 3.4.22.36 GO:0004197 ... P29466 16274992
    48451 1rwy:A (1.05) BS01 CA ? GO:0005509 ... P02625 15169955
    48452 1rwy:A (1.05) BS02 CA ? GO:0005509 ... P02625 15169955
    48453 1rwy:B (1.05) BS01 CA ? GO:0005509 ... P02625 15169955
    48454 1rwy:B (1.05) BS02 CA ? GO:0005509 ... P02625 15169955
    48455 1rwy:C (1.05) BS01 CA ? GO:0005509 ... P02625 15169955
    48456 1rwy:C (1.05) BS02 CA ? GO:0005509 ... P02625 15169955
    48457 1rx0:A (1.77) BS01 FAD 1.3.8.5 GO:0003853 ... Q9UKU7 14752098
    48458 1rx0:A (1.77) BS02 FAD 1.3.8.5 GO:0003853 ... Q9UKU7 14752098
    48459 1rx0:B (1.77) BS01 FAD 1.3.8.5 GO:0003853 ... Q9UKU7 14752098
    48460 1rx0:B (1.77) BS02 FAD 1.3.8.5 GO:0003853 ... Q9UKU7 14752098
    48461 1rx0:C (1.77) BS01 FAD 1.3.8.5 GO:0003853 ... Q9UKU7 14752098
    48462 1rx0:C (1.77) BS02 FAD 1.3.8.5 GO:0003853 ... Q9UKU7 14752098
    48463 1rx0:C (1.77) BS03 2MC 1.3.8.5 GO:0003853 ... Q9UKU7 14752098
    48464 1rx0:D (1.77) BS01 FAD 1.3.8.5 GO:0003853 ... Q9UKU7 14752098
    48465 1rx0:D (1.77) BS02 FAD 1.3.8.5 GO:0003853 ... Q9UKU7 14752098
    48466 1rx0:D (1.77) BS03 2MC 1.3.8.5 GO:0003853 ... Q9UKU7 14752098
    48467 1rx1:A (2.0) BS01 NAP 1.5.1.3 GO:0004146 ... P0ABQ4 9012674 MOAD: Kd=24uM
    48468 1rx2:A (1.8) BS01 NAP 1.5.1.3 GO:0004146 ... P0ABQ4 9012674
    48469 1rx3:A (2.2) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 9012674 BindingDB: IC50=8.8nM, EC50=1nM
    48470 1rx3:A (2.2) BS02 NAP 1.5.1.3 GO:0004146 ... P0ABQ4 9012674
    48471 1rx4:A (2.2) BS01 DDF 1.5.1.3 GO:0004146 ... P0ABQ4 9012674
    48472 1rx4:A (2.2) BS02 NAP 1.5.1.3 GO:0004146 ... P0ABQ4 9012674
    48473 1rx5:A (2.3) BS01 DDF 1.5.1.3 GO:0004146 ... P0ABQ4 9012674
    48474 1rx6:A (2.0) BS01 DDF 1.5.1.3 GO:0004146 ... P0ABQ4 9012674
    48475 1rx6:A (2.0) BS02 NAP 1.5.1.3 GO:0004146 ... P0ABQ4 9012674
    48476 1rx8:A (2.8) BS01 NAP 1.5.1.3 GO:0004146 ... P0ABQ4 9012674
    48477 1rx9:A (1.9) BS01 NAP 1.5.1.3 GO:0004146 ... P0ABQ4 9012674 MOAD: Kd=24uM
    48478 1rxc:A (2.35) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48479 1rxc:A (2.35) BS02 R1P 2.4.2.3 GO:0003824 ... P12758 15003451
    48480 1rxc:B (2.35) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48481 1rxc:B (2.35) BS02 R1P 2.4.2.3 GO:0003824 ... P12758 15003451
    48482 1rxc:B (2.35) BS03 URF 2.4.2.3 GO:0003824 ... P12758 15003451
    48483 1rxc:C (2.35) BS01 R1P 2.4.2.3 GO:0003824 ... P12758 15003451
    48484 1rxc:C (2.35) BS02 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48485 1rxc:C (2.35) BS03 URF 2.4.2.3 GO:0003824 ... P12758 15003451
    48486 1rxc:C (2.35) BS04 R1P 2.4.2.3 GO:0003824 ... P12758 15003451
    48487 1rxc:D (2.35) BS01 R1P 2.4.2.3 GO:0003824 ... P12758 15003451
    48488 1rxc:D (2.35) BS02 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48489 1rxc:D (2.35) BS03 R1P 2.4.2.3 GO:0003824 ... P12758 15003451
    48490 1rxc:D (2.35) BS04 URF 2.4.2.3 GO:0003824 ... P12758 15003451
    48491 1rxc:E (2.35) BS01 R1P 2.4.2.3 GO:0003824 ... P12758 15003451
    48492 1rxc:E (2.35) BS02 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48493 1rxc:E (2.35) BS03 URF 2.4.2.3 GO:0003824 ... P12758 15003451
    48494 1rxc:E (2.35) BS04 R1P 2.4.2.3 GO:0003824 ... P12758 15003451
    48495 1rxc:F (2.35) BS01 R1P 2.4.2.3 GO:0003824 ... P12758 15003451
    48496 1rxc:F (2.35) BS02 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48497 1rxc:F (2.35) BS03 R1P 2.4.2.3 GO:0003824 ... P12758 15003451
    48498 1rxc:F (2.35) BS04 URF 2.4.2.3 GO:0003824 ... P12758 15003451
    48499 1rxc:I (2.35) BS01 R1P 2.4.2.3 GO:0003824 ... P12758 15003451
    48500 1rxc:I (2.35) BS02 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48501 1rxc:I (2.35) BS03 URF 2.4.2.3 GO:0003824 ... P12758 15003451
    48502 1rxc:J (2.35) BS01 R1P 2.4.2.3 GO:0003824 ... P12758 15003451
    48503 1rxc:J (2.35) BS02 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48504 1rxc:J (2.35) BS03 PO4 2.4.2.3 GO:0003824 ... P12758 15003451
    48505 1rxc:J (2.35) BS04 5UD 2.4.2.3 GO:0003824 ... P12758 15003451
    48506 1rxc:K (2.35) BS01 R1P 2.4.2.3 GO:0003824 ... P12758 15003451
    48507 1rxc:K (2.35) BS02 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48508 1rxc:K (2.35) BS03 URF 2.4.2.3 GO:0003824 ... P12758 15003451
    48509 1rxc:K (2.35) BS04 R1P 2.4.2.3 GO:0003824 ... P12758 15003451
    48510 1rxc:L (2.35) BS01 R1P 2.4.2.3 GO:0003824 ... P12758 15003451
    48511 1rxc:L (2.35) BS02 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48512 1rxc:L (2.35) BS03 R1P 2.4.2.3 GO:0003824 ... P12758 15003451
    48513 1rxc:L (2.35) BS04 URF 2.4.2.3 GO:0003824 ... P12758 15003451
    48514 1rxe:A (1.7) BS01 MNB 1.20.4.4 GO:0004725 ... P0A006 15159594
    48515 1rxf:A (1.5) BS01 FE 1.14.20.1 GO:0005506 ... P18548 9723623
    48516 1rxg:A (1.5) BS01 FE 1.14.20.1 GO:0005506 ... P18548 9723623
    48517 1rxg:A (1.5) BS02 AKG 1.14.20.1 GO:0005506 ... P18548 9723623
    48518 1rxh:A (2.9) BS01 BNI ? GO:0009374 ... P22629 15079055
    48519 1rxh:B (2.9) BS01 BNI ? GO:0009374 ... P22629 15079055
    48520 1rxj:A (1.14) BS01 BNI ? GO:0009374 ... P22629 15079055
    48521 1rxj:B (1.14) BS01 BNI ? GO:0009374 ... P22629 15079055
    48522 1rxj:B (1.14) BS02 BNI ? GO:0009374 ... P22629 15079055
    48523 1rxj:C (1.14) BS01 BNI ? GO:0009374 ... P22629 15079055
    48524 1rxj:C (1.14) BS02 BNI ? GO:0009374 ... P22629 15079055
    48525 1rxj:D (1.14) BS01 BNI ? GO:0009374 ... P22629 15079055
    48526 1rxk:A (1.7) BS01 BNI ? GO:0009374 ... P22629 15079055
    48527 1rxk:B (1.7) BS01 BNI ? GO:0009374 ... P22629 15079055
    48528 1rxm:A (2.8) BS01 peptide ? GO:0003677 ... O29912 14718165
    48529 1rxo:B (2.2) BS01 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    48530 1rxo:B (2.2) BS02 CA 4.1.1.39 GO:0000287 ... P00875 9034362
    48531 1rxo:E (2.2) BS01 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    48532 1rxo:E (2.2) BS02 CA 4.1.1.39 GO:0000287 ... P00875 9034362
    48533 1rxo:H (2.2) BS01 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    48534 1rxo:H (2.2) BS02 CA 4.1.1.39 GO:0000287 ... P00875 9034362
    48535 1rxo:L (2.2) BS01 RUB 4.1.1.39 GO:0000287 ... P00875 9034362
    48536 1rxo:L (2.2) BS02 CA 4.1.1.39 GO:0000287 ... P00875 9034362
    48537 1rxp:A (1.7) BS01 CA 3.4.21.4 GO:0004175 ... P00760 15081015
    48538 1rxp:A (1.7) BS02 169 3.4.21.4 GO:0004175 ... P00760 15081015
    48539 1rxq:D (1.7) BS01 GLU 3.-.-.- GO:0005737 ... O31562 15581359
    48540 1rxq:D (1.7) BS02 SER 3.-.-.- GO:0005737 ... O31562 15581359
    48541 1rxr:A (-1.00) BS01 ZN ? GO:0003700 ... P19793 9698548
    48542 1rxr:A (-1.00) BS02 ZN ? GO:0003700 ... P19793 9698548
    48543 1rxs:A (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48544 1rxs:B (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48545 1rxs:B (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48546 1rxs:B (2.8) BS03 V7O 2.4.2.3 GO:0003824 ... P12758 15003451
    48547 1rxs:C (2.8) BS01 V7O 2.4.2.3 GO:0003824 ... P12758 15003451
    48548 1rxs:C (2.8) BS02 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48549 1rxs:C (2.8) BS03 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48550 1rxs:D (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48551 1rxs:D (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48552 1rxs:E (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48553 1rxs:E (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48554 1rxs:F (2.8) BS01 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48555 1rxs:F (2.8) BS02 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48556 1rxs:G (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48557 1rxs:G (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48558 1rxs:H (2.8) BS01 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48559 1rxs:H (2.8) BS02 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48560 1rxs:H (2.8) BS03 V7O 2.4.2.3 GO:0003824 ... P12758 15003451
    48561 1rxs:I (2.8) BS01 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48562 1rxs:I (2.8) BS02 V7O 2.4.2.3 GO:0003824 ... P12758 15003451
    48563 1rxs:I (2.8) BS03 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48564 1rxs:J (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48565 1rxs:J (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48566 1rxs:K (2.8) BS01 V7O 2.4.2.3 GO:0003824 ... P12758 15003451
    48567 1rxs:K (2.8) BS02 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48568 1rxs:K (2.8) BS03 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48569 1rxs:L (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48570 1rxs:M (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48571 1rxs:M (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48572 1rxs:N (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48573 1rxs:N (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48574 1rxs:O (2.8) BS01 V7O 2.4.2.3 GO:0003824 ... P12758 15003451
    48575 1rxs:O (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48576 1rxs:O (2.8) BS03 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48577 1rxs:P (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48578 1rxs:P (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48579 1rxs:Q (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48580 1rxs:Q (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48581 1rxs:R (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48582 1rxs:R (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48583 1rxs:a (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48584 1rxs:a (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48585 1rxs:b (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48586 1rxs:b (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48587 1rxs:c (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48588 1rxs:c (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48589 1rxs:d (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48590 1rxs:d (2.8) BS02 V7O 2.4.2.3 GO:0003824 ... P12758 15003451
    48591 1rxs:e (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48592 1rxs:e (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48593 1rxs:h (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48594 1rxs:h (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48595 1rxs:i (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48596 1rxs:i (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48597 1rxs:j (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48598 1rxs:j (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451
    48599 1rxs:k (2.8) BS01 K 2.4.2.3 GO:0003824 ... P12758 15003451
    48600 1rxs:k (2.8) BS02 DUR 2.4.2.3 GO:0003824 ... P12758 15003451

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).