SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    486601 6jai:A (2.1) BS01 GLC ? N/A Q5SLD7 31608555
    486602 6jai:A (2.1) BS02 GLC ? N/A Q5SLD7 31608555
    486603 6jai:A (2.1) BS03 CA ? N/A Q5SLD7 31608555
    486604 6jam:A (1.63) BS01 GLC ? N/A Q5SLD7 31608555
    486605 6jam:A (1.63) BS02 GLC ? N/A Q5SLD7 31608555
    486606 6jan:A (1.77) BS01 GLC ? N/A Q5SLD7 31608555
    486607 6jan:A (1.77) BS02 GLC ? N/A Q5SLD7 31608555
    486608 6jao:A (1.77) BS01 Z9N ? N/A Q5SLD7 31608555
    486609 6jao:A (1.77) BS02 GLC ? N/A Q5SLD7 31608555
    486610 6jap:A (1.77) BS01 GLC ? N/A Q5SLD7 31608555
    486611 6jap:A (1.77) BS02 FRU ? N/A Q5SLD7 31608555
    486612 6jaq:A (1.95) BS01 GLC ? N/A Q5SLD7 31608555 MOAD: Kd=111.23uM
    486613 6jar:A (1.63) BS01 GLC ? N/A Q5SLD7 31608555
    486614 6jar:A (1.63) BS02 GLC ? N/A Q5SLD7 31608555
    486615 6jas:A (2.501) BS01 FE ? GO:0005515 ... P02787 N/A
    486616 6jat:A (2.713) BS01 peptide 2.1.1.85 GO:0018064 ... Q86TU7 N/A
    486617 6jat:A (2.713) BS02 SFG 2.1.1.85 GO:0018064 ... Q86TU7 N/A
    486618 6jat:C (2.713) BS01 peptide 2.1.1.85 GO:0018064 ... Q86TU7 N/A
    486619 6jat:C (2.713) BS02 SFG 2.1.1.85 GO:0018064 ... Q86TU7 N/A
    486620 6jau:A (1.905) BS01 CA ? GO:0005515 ... P38108 32747658
    486621 6jav:A (1.437) BS01 BC0 3.2.1.14 GO:0004553 ... A0A221ZS22 31053640 MOAD: Ki=1.72uM
    486622 6jaw:A (1.981) BS01 BBO 3.2.1.14 GO:0004553 ... A0A221ZS22 31053640 MOAD: Ki=2.18uM
    486623 6jax:A (1.7) BS01 GCS 3.2.1.14 GO:0004553 ... A0A221ZS22 31053640
    486624 6jax:A (1.7) BS02 GCS 3.2.1.14 GO:0004553 ... A0A221ZS22 31053640
    486625 6jay:A (1.498) BS01 JUK 3.2.1.14 GO:0004553 ... A0A221ZS22 31053640 MOAD: Ki=1.99uM
    486626 6jaz:A (1.85) BS01 GLC ? N/A Q5SLD7 31608555
    486627 6jaz:A (1.85) BS02 GLC ? N/A Q5SLD7 31608555
    486628 6jb0:A (1.63) BS01 GLC ? N/A Q5SLD7 31608555
    486629 6jb0:A (1.63) BS02 GLC ? N/A Q5SLD7 31608555
    486630 6jb0:A (1.63) BS03 PDO ? N/A Q5SLD7 31608555
    486631 6jb1:A (3.3) BS01 AGS ? GO:0001508 ... Q61743 31067468
    486632 6jb1:A (3.3) BS02 AGS ? GO:0001508 ... Q61743 31067468
    486633 6jb1:B (3.3) BS01 AJP ? GO:0001508 ... A0A1U7R319 31067468
    486634 6jb1:B (3.3) BS02 AGS ? GO:0001508 ... A0A1U7R319 31067468
    486635 6jb1:B (3.3) BS03 BJX ? GO:0001508 ... A0A1U7R319 31067468
    486636 6jb1:C (3.3) BS01 AGS ? GO:0001508 ... Q61743 31067468
    486637 6jb1:C (3.3) BS02 AGS ? GO:0001508 ... Q61743 31067468
    486638 6jb1:D (3.3) BS01 AJP ? GO:0001508 ... A0A1U7R319 31067468
    486639 6jb1:D (3.3) BS02 AGS ? GO:0001508 ... A0A1U7R319 31067468
    486640 6jb1:D (3.3) BS03 BJX ? GO:0001508 ... A0A1U7R319 31067468
    486641 6jb1:E (3.3) BS01 AGS ? GO:0001508 ... Q61743 31067468
    486642 6jb1:E (3.3) BS02 AGS ? GO:0001508 ... Q61743 31067468
    486643 6jb1:F (3.3) BS01 AJP ? GO:0001508 ... A0A1U7R319 31067468
    486644 6jb1:F (3.3) BS02 AGS ? GO:0001508 ... A0A1U7R319 31067468
    486645 6jb1:F (3.3) BS03 BJX ? GO:0001508 ... A0A1U7R319 31067468
    486646 6jb1:G (3.3) BS01 AGS ? GO:0001508 ... Q61743 31067468
    486647 6jb1:G (3.3) BS02 AGS ? GO:0001508 ... Q61743 31067468
    486648 6jb1:H (3.3) BS01 AJP ? GO:0001508 ... A0A1U7R319 31067468
    486649 6jb1:H (3.3) BS02 AGS ? GO:0001508 ... A0A1U7R319 31067468
    486650 6jb1:H (3.3) BS03 BJX ? GO:0001508 ... A0A1U7R319 31067468
    486651 6jb3:B (3.53) BS01 BJX ? GO:0001508 ... A0A1U7R319 31067468
    486652 6jb3:B (3.53) BS02 AJP ? GO:0001508 ... A0A1U7R319 31067468
    486653 6jb4:A (1.63) BS01 GLC ? N/A Q5SLD7 31608555
    486654 6jb4:A (1.63) BS02 GLC ? N/A Q5SLD7 31608555
    486655 6jba:A (2.0) BS01 Z9N ? N/A Q5SLD7 31608555
    486656 6jba:A (2.0) BS02 GLC ? N/A Q5SLD7 31608555
    486657 6jbb:A (1.95) BS01 GLC ? N/A Q5SLD7 31608555
    486658 6jbb:A (1.95) BS02 FRU ? N/A Q5SLD7 31608555
    486659 6jbc:A (2.7) BS01 GOL 2.7.1.169 GO:0005524 ... Q5JHF1 31697438
    486660 6jbc:A (2.7) BS02 GOL 2.7.1.169 GO:0005524 ... Q5JHF1 31697438
    486661 6jbd:A (2.5) BS01 GOL 2.7.1.169 GO:0005524 ... Q5JHF1 31697438
    486662 6jbd:A (2.5) BS02 GOL 2.7.1.169 GO:0005524 ... Q5JHF1 31697438
    486663 6jbd:A (2.5) BS03 ATP 2.7.1.169 GO:0005524 ... Q5JHF1 31697438
    486664 6jbe:A (1.75) BS01 GLC ? N/A Q5SLD7 31608555 MOAD: Kd=19.8uM
    486665 6jbj:A (3.6) BS01 ATP 7.6.2.8 GO:0005324 ... O14678 31467407
    486666 6jbj:A (3.6) BS02 ATP 7.6.2.8 GO:0005324 ... O14678 31467407
    486667 6jbj:B (3.6) BS01 ATP 7.6.2.8 GO:0005324 ... O14678 31467407
    486668 6jbj:B (3.6) BS02 ATP 7.6.2.8 GO:0005324 ... O14678 31467407
    486669 6jbk:A (2.45) BS01 peptide 3.6.4.- GO:0000287 ... P68135 N/A
    486670 6jbk:A (2.45) BS02 ATP 3.6.4.- GO:0000287 ... P68135 N/A
    486671 6jbk:A (2.45) BS03 CA 3.6.4.- GO:0000287 ... P68135 N/A
    486672 6jbk:C (2.45) BS01 peptide 3.6.4.- GO:0000287 ... P68135 N/A
    486673 6jbk:C (2.45) BS02 peptide 3.6.4.- GO:0000287 ... P68135 N/A
    486674 6jbk:C (2.45) BS03 ATP 3.6.4.- GO:0000287 ... P68135 N/A
    486675 6jbk:C (2.45) BS04 CA 3.6.4.- GO:0000287 ... P68135 N/A
    486676 6jbk:E (2.45) BS01 peptide 3.6.4.- GO:0000287 ... P68135 N/A
    486677 6jbk:E (2.45) BS02 peptide 3.6.4.- GO:0000287 ... P68135 N/A
    486678 6jbk:E (2.45) BS03 ATP 3.6.4.- GO:0000287 ... P68135 N/A
    486679 6jbk:E (2.45) BS04 CA 3.6.4.- GO:0000287 ... P68135 N/A
    486680 6jbk:G (2.45) BS01 peptide 3.6.4.- GO:0000287 ... P68135 N/A
    486681 6jbk:G (2.45) BS02 ATP 3.6.4.- GO:0000287 ... P68135 N/A
    486682 6jbk:G (2.45) BS03 CA 3.6.4.- GO:0000287 ... P68135 N/A
    486683 6jbn:A (2.3) BS01 HEM N/A GO:0004601 ... N/A N/A
    486684 6jbn:A (2.3) BS02 OXY N/A GO:0004601 ... N/A N/A
    486685 6jbn:B (2.3) BS01 HEM N/A GO:0004601 ... N/A N/A
    486686 6jbn:B (2.3) BS02 OXY N/A GO:0004601 ... N/A N/A
    486687 6jbq:C (4.02) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 31131408
    486688 6jbq:C (4.02) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 31131408
    486689 6jbq:C (4.02) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 31131408
    486690 6jbq:D (4.02) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 31131408
    486691 6jbq:D (4.02) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 31131408
    486692 6jbq:D (4.02) BS03 MG 2.7.7.6 GO:0000287 ... P0A8T7 31131408
    486693 6jbq:D (4.02) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 31131408
    486694 6jbq:F (4.02) BS01 dna ? GO:0000345 ... P0AGB6 31131408
    486695 6jbq:F (4.02) BS02 dna ? GO:0000345 ... P0AGB6 31131408
    486696 6jbr:A (2.03) BS01 GLC 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486697 6jbr:A (2.03) BS02 G6P 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486698 6jbr:A (2.03) BS03 UDP 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486699 6jbr:B (2.03) BS01 GLC 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486700 6jbr:B (2.03) BS02 G6P 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486701 6jbr:B (2.03) BS03 UDP 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486702 6jbr:D (2.03) BS01 GLC 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486703 6jbr:D (2.03) BS02 G6P 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486704 6jbr:D (2.03) BS03 UDP 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486705 6jbr:F (2.03) BS01 GLC 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486706 6jbr:F (2.03) BS02 G6P 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486707 6jbr:F (2.03) BS03 UDP 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486708 6jbr:H (2.03) BS01 GLC 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486709 6jbr:H (2.03) BS02 G6P 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486710 6jbr:H (2.03) BS03 UDP 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486711 6jbr:K (2.03) BS01 GLC 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486712 6jbr:K (2.03) BS02 G6P 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486713 6jbr:K (2.03) BS03 UDP 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486714 6jbr:M (2.03) BS01 GLC 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486715 6jbr:M (2.03) BS02 G6P 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486716 6jbr:M (2.03) BS03 UDP 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486717 6jbr:O (2.03) BS01 GLC 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486718 6jbr:O (2.03) BS02 G6P 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486719 6jbr:O (2.03) BS03 UDP 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486720 6jbs:A (2.4) BS01 MAN 3.2.1.21 GO:0004553 ... G8GLP2 31925310
    486721 6jbs:A (2.4) BS02 MAN 3.2.1.21 GO:0004553 ... G8GLP2 31925310
    486722 6jbs:C (2.4) BS01 BMA 3.2.1.21 GO:0004553 ... G8GLP2 31925310
    486723 6jbs:D (2.4) BS01 MAN 3.2.1.21 GO:0004553 ... G8GLP2 31925310
    486724 6jbs:D (2.4) BS02 MAN 3.2.1.21 GO:0004553 ... G8GLP2 31925310
    486725 6jbs:D (2.4) BS03 MAN 3.2.1.21 GO:0004553 ... G8GLP2 31925310
    486726 6jbt:F (2.47) BS01 FUC ? GO:0016020 ... Q15116 30892132
    486727 6jbt:F (2.47) BS02 FUC ? GO:0016020 ... Q15116 30892132
    486728 6jbw:A (2.65) BS01 UDP 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486729 6jbw:B (2.65) BS01 UDP 2.4.1.15 GO:0003824 ... G4NHF4 31455720
    486730 6jbx:A (2.2) BS01 dna ? GO:0003700 ... Q8DR18 31291684
    486731 6jbx:A (2.2) BS02 dna ? GO:0003700 ... Q8DR18 31291684
    486732 6jbx:B (2.2) BS01 dna ? GO:0003700 ... Q8DR18 31291684
    486733 6jbx:B (2.2) BS02 dna ? GO:0003700 ... Q8DR18 31291684
    486734 6jby:A (1.6) BS01 FAD 4.1.2.10 GO:0016491 ... O24243 N/A
    486735 6jc3:A (4.8) BS01 rna ? GO:0005198 ... D6R3F6 31290740
    486736 6jc7:A (2.2) BS01 F0G ? GO:0008483 ... H8Y6N2 32814814
    486737 6jc7:B (2.2) BS01 F0G ? GO:0008483 ... H8Y6N2 32814814
    486738 6jc7:C (2.2) BS01 F0G ? GO:0008483 ... H8Y6N2 32814814
    486739 6jc7:D (2.2) BS01 F0G ? GO:0008483 ... H8Y6N2 32814814
    486740 6jc8:A (2.25) BS01 PL6 ? GO:0008483 ... H8Y6N2 32814814
    486741 6jc8:A (2.25) BS02 PL6 ? GO:0008483 ... H8Y6N2 32814814
    486742 6jc8:B (2.25) BS01 PL6 ? GO:0008483 ... H8Y6N2 32814814
    486743 6jc8:B (2.25) BS02 PL6 ? GO:0008483 ... H8Y6N2 32814814
    486744 6jc8:C (2.25) BS01 PL6 ? GO:0008483 ... H8Y6N2 32814814
    486745 6jc8:C (2.25) BS02 PL6 ? GO:0008483 ... H8Y6N2 32814814
    486746 6jc8:D (2.25) BS01 PL6 ? GO:0008483 ... H8Y6N2 32814814
    486747 6jc8:D (2.25) BS02 PL6 ? GO:0008483 ... H8Y6N2 32814814
    486748 6jc9:A (2.35) BS01 PLP ? GO:0008483 ... H8Y6N2 32814814
    486749 6jc9:B (2.35) BS01 PLP ? GO:0008483 ... H8Y6N2 32814814
    486750 6jc9:C (2.35) BS01 PLP ? GO:0008483 ... H8Y6N2 32814814
    486751 6jc9:C (2.35) BS02 GLN ? GO:0008483 ... H8Y6N2 32814814
    486752 6jc9:D (2.35) BS01 GLN ? GO:0008483 ... H8Y6N2 32814814
    486753 6jc9:D (2.35) BS02 PLP ? GO:0008483 ... H8Y6N2 32814814
    486754 6jci:A (1.493) BS01 BKO 3.4.21.-
    3.4.21.26
    GO:0004252 ... A0A1X9T5X9 N/A
    486755 6jcj:A (2.5) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 30803758
    486756 6jcj:A (2.5) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 30803758
    486757 6jcj:A (2.5) BS03 BG0 3.6.5.- GO:0000226 ... Q2XVP4 30803758
    486758 6jcj:B (2.5) BS01 GDP ? GO:0000226 ... Q6B856 30803758
    486759 6jcj:B (2.5) BS02 MG ? GO:0000226 ... Q6B856 30803758
    486760 6jcj:B (2.5) BS03 BG0 ? GO:0000226 ... Q6B856 30803758
    486761 6jcj:C (2.5) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 30803758
    486762 6jcj:C (2.5) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 30803758
    486763 6jcj:C (2.5) BS03 BG0 3.6.5.- GO:0000226 ... Q2XVP4 30803758
    486764 6jcj:D (2.5) BS01 GTP ? GO:0000226 ... Q6B856 30803758
    486765 6jcj:D (2.5) BS02 BG0 ? GO:0000226 ... Q6B856 30803758
    486766 6jcj:F (2.5) BS01 ACP N/A GO:0036211 ... N/A 30803758
    486767 6jcl:A (1.644) BS01 SAH 2.1.1.6 GO:0005886 ... O07431 31147608 MOAD: Kd=12.5uM
    486768 6jcl:A (1.644) BS02 SR 2.1.1.6 GO:0005886 ... O07431 31147608
    486769 6jcl:A (1.644) BS03 SR 2.1.1.6 GO:0005886 ... O07431 31147608
    486770 6jcl:B (1.644) BS01 SAH 2.1.1.6 GO:0005886 ... O07431 31147608 MOAD: Kd=12.5uM
    486771 6jcl:B (1.644) BS02 SR 2.1.1.6 GO:0005886 ... O07431 31147608
    486772 6jcl:C (1.644) BS01 SR 2.1.1.6 GO:0005886 ... O07431 31147608
    486773 6jcl:C (1.644) BS02 SR 2.1.1.6 GO:0005886 ... O07431 31147608
    486774 6jcl:C (1.644) BS03 SAH 2.1.1.6 GO:0005886 ... O07431 31147608 MOAD: Kd=12.5uM
    486775 6jcl:D (1.644) BS01 SAH 2.1.1.6 GO:0005886 ... O07431 31147608 MOAD: Kd=12.5uM
    486776 6jcl:D (1.644) BS02 SR 2.1.1.6 GO:0005886 ... O07431 31147608
    486777 6jcl:E (1.644) BS01 SR 2.1.1.6 GO:0005886 ... O07431 31147608
    486778 6jcl:E (1.644) BS02 SAH 2.1.1.6 GO:0005886 ... O07431 31147608 MOAD: Kd=12.5uM
    486779 6jcl:F (1.644) BS01 SR 2.1.1.6 GO:0005886 ... O07431 31147608
    486780 6jcl:F (1.644) BS02 SR 2.1.1.6 GO:0005886 ... O07431 31147608
    486781 6jcl:F (1.644) BS03 SAH 2.1.1.6 GO:0005886 ... O07431 31147608 MOAD: Kd=12.5uM
    486782 6jcl:G (1.644) BS01 SAH 2.1.1.6 GO:0005886 ... O07431 31147608 MOAD: Kd=12.5uM
    486783 6jcl:G (1.644) BS02 SR 2.1.1.6 GO:0005886 ... O07431 31147608
    486784 6jcl:G (1.644) BS03 SR 2.1.1.6 GO:0005886 ... O07431 31147608
    486785 6jcl:H (1.644) BS01 SR 2.1.1.6 GO:0005886 ... O07431 31147608
    486786 6jcl:H (1.644) BS02 SAH 2.1.1.6 GO:0005886 ... O07431 31147608 MOAD: Kd=12.5uM
    486787 6jcu:A (2.297) BS01 peptide 3.6.4.- GO:0000287 ... P68135 N/A
    486788 6jcu:A (2.297) BS02 ATP 3.6.4.- GO:0000287 ... P68135 N/A
    486789 6jcu:C (2.297) BS01 peptide 3.6.4.- GO:0000287 ... P68135 N/A
    486790 6jcu:C (2.297) BS02 ATP 3.6.4.- GO:0000287 ... P68135 N/A
    486791 6jcw:A (3.04) BS01 MG 1.1.1.86 GO:0004455 ... Q97YJ9 30921515
    486792 6jcw:B (3.04) BS01 MG 1.1.1.86 GO:0004455 ... Q97YJ9 30921515
    486793 6jcw:C (3.04) BS01 MG 1.1.1.86 GO:0004455 ... Q97YJ9 30921515
    486794 6jcw:D (3.04) BS01 MG 1.1.1.86 GO:0004455 ... Q97YJ9 30921515
    486795 6jcw:E (3.04) BS01 MG 1.1.1.86 GO:0004455 ... Q97YJ9 30921515
    486796 6jcw:F (3.04) BS01 MG 1.1.1.86 GO:0004455 ... Q97YJ9 30921515
    486797 6jcw:G (3.04) BS01 MG 1.1.1.86 GO:0004455 ... Q97YJ9 30921515
    486798 6jcw:H (3.04) BS01 MG 1.1.1.86 GO:0004455 ... Q97YJ9 30921515
    486799 6jcw:I (3.04) BS01 MG 1.1.1.86 GO:0004455 ... Q97YJ9 30921515
    486800 6jcw:J (3.04) BS01 MG 1.1.1.86 GO:0004455 ... Q97YJ9 30921515

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).