SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    489601 6jlu:b (3.02) BS02 CLA N/A GO:0009521 ... N/A 31371578
    489602 6jlu:b (3.02) BS03 CLA N/A GO:0009521 ... N/A 31371578
    489603 6jlu:b (3.02) BS04 CLA N/A GO:0009521 ... N/A 31371578
    489604 6jlu:b (3.02) BS05 CLA N/A GO:0009521 ... N/A 31371578
    489605 6jlu:b (3.02) BS06 CLA N/A GO:0009521 ... N/A 31371578
    489606 6jlu:b (3.02) BS07 CLA N/A GO:0009521 ... N/A 31371578
    489607 6jlu:b (3.02) BS08 CLA N/A GO:0009521 ... N/A 31371578
    489608 6jlu:b (3.02) BS09 CLA N/A GO:0009521 ... N/A 31371578
    489609 6jlu:b (3.02) BS10 CLA N/A GO:0009521 ... N/A 31371578
    489610 6jlu:b (3.02) BS11 CLA N/A GO:0009521 ... N/A 31371578
    489611 6jlu:b (3.02) BS12 CLA N/A GO:0009521 ... N/A 31371578
    489612 6jlu:b (3.02) BS13 CLA N/A GO:0009521 ... N/A 31371578
    489613 6jlu:b (3.02) BS14 CLA N/A GO:0009521 ... N/A 31371578
    489614 6jlu:b (3.02) BS15 CLA N/A GO:0009521 ... N/A 31371578
    489615 6jlu:c (3.02) BS01 CLA N/A GO:0009521 ... N/A 31371578
    489616 6jlu:c (3.02) BS02 CLA N/A GO:0009521 ... N/A 31371578
    489617 6jlu:c (3.02) BS03 OEX N/A GO:0009521 ... N/A 31371578
    489618 6jlu:c (3.02) BS04 CLA N/A GO:0009521 ... N/A 31371578
    489619 6jlu:c (3.02) BS05 CLA N/A GO:0009521 ... N/A 31371578
    489620 6jlu:c (3.02) BS06 CLA N/A GO:0009521 ... N/A 31371578
    489621 6jlu:c (3.02) BS07 CLA N/A GO:0009521 ... N/A 31371578
    489622 6jlu:c (3.02) BS08 CLA N/A GO:0009521 ... N/A 31371578
    489623 6jlu:c (3.02) BS09 CLA N/A GO:0009521 ... N/A 31371578
    489624 6jlu:c (3.02) BS10 CLA N/A GO:0009521 ... N/A 31371578
    489625 6jlu:c (3.02) BS11 CLA N/A GO:0009521 ... N/A 31371578
    489626 6jlu:c (3.02) BS12 CLA N/A GO:0009521 ... N/A 31371578
    489627 6jlu:c (3.02) BS13 CLA N/A GO:0009521 ... N/A 31371578
    489628 6jlu:c (3.02) BS14 CLA N/A GO:0009521 ... N/A 31371578
    489629 6jlu:c (3.02) BS15 CLA N/A GO:0009521 ... N/A 31371578
    489630 6jlu:c (3.02) BS16 CLA N/A GO:0009521 ... N/A 31371578
    489631 6jlu:c (3.02) BS17 CLA N/A GO:0009521 ... N/A 31371578
    489632 6jlu:c (3.02) BS18 CLA N/A GO:0009521 ... N/A 31371578
    489633 6jlu:d (3.02) BS01 FE2 N/A GO:0009523 ... N/A 31371578
    489634 6jlu:d (3.02) BS02 CLA N/A GO:0009523 ... N/A 31371578
    489635 6jlu:d (3.02) BS03 PHO N/A GO:0009523 ... N/A 31371578
    489636 6jlu:d (3.02) BS04 CLA N/A GO:0009523 ... N/A 31371578
    489637 6jlu:d (3.02) BS05 CLA N/A GO:0009523 ... N/A 31371578
    489638 6jlu:d (3.02) BS06 PHO N/A GO:0009523 ... N/A 31371578
    489639 6jlu:d (3.02) BS07 CLA N/A GO:0009523 ... N/A 31371578
    489640 6jlu:d (3.02) BS08 CLA N/A GO:0009523 ... N/A 31371578
    489641 6jlu:e (3.02) BS01 HEM N/A GO:0009523 ... N/A 31371578
    489642 6jlu:f (3.02) BS01 HEM N/A GO:0009523 ... N/A 31371578
    489643 6jlu:h (3.02) BS01 CLA ? GO:0009507 ... B7XBY7 31371578
    489644 6jlu:h (3.02) BS02 CLA ? GO:0009507 ... B7XBY7 31371578
    489645 6jlu:h (3.02) BS03 CLA ? GO:0009507 ... B7XBY7 31371578
    489646 6jlu:h (3.02) BS04 CLA ? GO:0009507 ... B7XBY7 31371578
    489647 6jlu:i (3.02) BS01 CLA N/A GO:0009523 ... N/A 31371578
    489648 6jlu:i (3.02) BS02 CLA N/A GO:0009523 ... N/A 31371578
    489649 6jlu:i (3.02) BS03 CLA N/A GO:0009523 ... N/A 31371578
    489650 6jlu:k (3.02) BS01 CLA N/A GO:0009523 ... N/A 31371578
    489651 6jlu:k (3.02) BS02 CLA N/A GO:0009523 ... N/A 31371578
    489652 6jlu:n (3.02) BS01 CLA N/A N/A N/A 31371578
    489653 6jlu:p (3.02) BS01 CLA N/A GO:0009765 ... N/A 31371578
    489654 6jlu:p (3.02) BS02 CLA N/A GO:0009765 ... N/A 31371578
    489655 6jlu:p (3.02) BS03 CLA N/A GO:0009765 ... N/A 31371578
    489656 6jlu:p (3.02) BS04 CLA N/A GO:0009765 ... N/A 31371578
    489657 6jlu:p (3.02) BS05 CLA N/A GO:0009765 ... N/A 31371578
    489658 6jlu:p (3.02) BS06 CLA N/A GO:0009765 ... N/A 31371578
    489659 6jlu:p (3.02) BS07 CLA N/A GO:0009765 ... N/A 31371578
    489660 6jlu:p (3.02) BS08 CLA N/A GO:0009765 ... N/A 31371578
    489661 6jlu:p (3.02) BS09 KC1 N/A GO:0009765 ... N/A 31371578
    489662 6jlu:p (3.02) BS10 CLA N/A GO:0009765 ... N/A 31371578
    489663 6jlu:p (3.02) BS11 A86 N/A GO:0009765 ... N/A 31371578
    489664 6jlu:p (3.02) BS12 DD6 N/A GO:0009765 ... N/A 31371578
    489665 6jlu:p (3.02) BS13 A86 N/A GO:0009765 ... N/A 31371578
    489666 6jlu:v (3.02) BS01 HEM ? GO:0005506 ... B6ZHF4 31371578
    489667 6jlu:w (3.02) BS01 CLA N/A GO:0009523 ... N/A 31371578
    489668 6jlu:x (3.02) BS01 CLA ? GO:0009507 ... B6ZHF2 31371578
    489669 6jlu:y (3.02) BS01 CLA N/A GO:0009523 ... N/A 31371578
    489670 6jlu:z (3.02) BS01 CLA N/A GO:0009523 ... N/A 31371578
    489671 6jlu:z (3.02) BS02 CLA N/A GO:0009523 ... N/A 31371578
    489672 6jlv:A (1.22) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    489673 6jlv:A (1.22) BS02 WAA 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    489674 6jlv:B (1.22) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    489675 6jlv:B (1.22) BS02 WAA 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    489676 6jly:C (3.5) BS01 PO4 ? GO:0002183 ... Q9UT76 31048492
    489677 6jly:D (3.5) BS01 PO4 ? GO:0002183 ... Q9UT76 31048492
    489678 6jly:E (3.5) BS01 PO4 ? GO:0002183 ... P56288 31048492
    489679 6jly:E (3.5) BS02 PO4 ? GO:0002183 ... P56288 31048492
    489680 6jly:F (3.5) BS01 PO4 ? GO:0002183 ... P56288 31048492
    489681 6jly:F (3.5) BS02 PO4 ? GO:0002183 ... P56288 31048492
    489682 6jly:G (3.5) BS01 PO4 ? GO:0002183 ... Q09924 31048492
    489683 6jlz:C (3.35) BS01 PO4 ? GO:0002183 ... Q9UT76 31048492
    489684 6jlz:D (3.35) BS01 PO4 ? GO:0002183 ... Q9UT76 31048492
    489685 6jlz:E (3.35) BS01 PO4 ? GO:0002183 ... P56288 31048492
    489686 6jlz:E (3.35) BS02 PO4 ? GO:0002183 ... P56288 31048492
    489687 6jlz:F (3.35) BS01 PO4 ? GO:0002183 ... P56288 31048492
    489688 6jlz:I (3.35) BS01 PO4 ? GO:0002183 ... P56287 31048492
    489689 6jm9:A (7.3) BS01 dna ? GO:0000786 ... P84233 30923167
    489690 6jm9:A (7.3) BS02 dna ? GO:0000786 ... P84233 30923167
    489691 6jm9:B (7.3) BS01 dna ? GO:0003677 ... P62799 30923167
    489692 6jm9:B (7.3) BS02 dna ? GO:0003677 ... P62799 30923167
    489693 6jm9:C (7.3) BS01 dna ? GO:0000786 ... Q6AZJ8 30923167
    489694 6jm9:C (7.3) BS02 dna ? GO:0000786 ... Q6AZJ8 30923167
    489695 6jm9:D (7.3) BS01 dna ? GO:0000786 ... P02281 30923167
    489696 6jm9:D (7.3) BS02 dna ? GO:0000786 ... P02281 30923167
    489697 6jm9:E (7.3) BS01 dna ? GO:0000786 ... P84233 30923167
    489698 6jm9:E (7.3) BS02 dna ? GO:0000786 ... P84233 30923167
    489699 6jm9:F (7.3) BS01 dna ? GO:0003677 ... P62799 30923167
    489700 6jm9:F (7.3) BS02 dna ? GO:0003677 ... P62799 30923167
    489701 6jm9:G (7.3) BS01 dna ? GO:0000786 ... Q6AZJ8 30923167
    489702 6jm9:G (7.3) BS02 dna ? GO:0000786 ... Q6AZJ8 30923167
    489703 6jm9:H (7.3) BS01 dna ? GO:0000786 ... P02281 30923167
    489704 6jm9:H (7.3) BS02 dna ? GO:0000786 ... P02281 30923167
    489705 6jm9:X (7.3) BS01 SAM 2.1.1.360 GO:0031151 ... Q8TEK3 30923167
    489706 6jma:A (6.8) BS01 dna ? GO:0000786 ... P84233 30923167
    489707 6jma:A (6.8) BS02 dna ? GO:0000786 ... P84233 30923167
    489708 6jma:B (6.8) BS01 dna ? GO:0003677 ... P62799 30923167
    489709 6jma:B (6.8) BS02 dna ? GO:0003677 ... P62799 30923167
    489710 6jma:C (6.8) BS01 dna ? GO:0000786 ... Q6AZJ8 30923167
    489711 6jma:C (6.8) BS02 dna ? GO:0000786 ... Q6AZJ8 30923167
    489712 6jma:D (6.8) BS01 dna ? GO:0000786 ... P02281 30923167
    489713 6jma:D (6.8) BS02 dna ? GO:0000786 ... P02281 30923167
    489714 6jma:E (6.8) BS01 dna ? GO:0000786 ... P84233 30923167
    489715 6jma:E (6.8) BS02 dna ? GO:0000786 ... P84233 30923167
    489716 6jma:F (6.8) BS01 dna ? GO:0003677 ... P62799 30923167
    489717 6jma:F (6.8) BS02 dna ? GO:0003677 ... P62799 30923167
    489718 6jma:G (6.8) BS01 dna ? GO:0000786 ... Q6AZJ8 30923167
    489719 6jma:G (6.8) BS02 dna ? GO:0000786 ... Q6AZJ8 30923167
    489720 6jma:H (6.8) BS01 dna ? GO:0000786 ... P02281 30923167
    489721 6jma:H (6.8) BS02 dna ? GO:0000786 ... P02281 30923167
    489722 6jma:X (6.8) BS01 SAM 2.1.1.360 GO:0031151 ... Q8TEK3 30923167
    489723 6jmb:A (1.389) BS01 AMI ? GO:0004553 ... A0A482LWB1 N/A
    489724 6jmd:A (1.781) BS01 FMN 1.3.5.2 GO:0004151 ... Q02127 32496056
    489725 6jmd:A (1.781) BS02 BVO 1.3.5.2 GO:0004151 ... Q02127 32496056 MOAD: ic50=1.2nM
    BindingDB: IC50=1.2nM
    489726 6jme:A (1.8) BS01 FMN 1.3.5.2 GO:0004151 ... Q02127 32496056
    489727 6jme:A (1.8) BS02 BVU 1.3.5.2 GO:0004151 ... Q02127 32496056 MOAD: ic50=4.5nM
    BindingDB: IC50=4.5nM
    489728 6jmf:A (2.0) BS01 9FC 2.7.10.2 GO:0004672 ... P07332 31097992
    489729 6jmg:A (2.701) BS01 GTP ? GO:0003924 ... Q7ZYF1 N/A
    489730 6jmg:A (2.701) BS02 MG ? GO:0003924 ... Q7ZYF1 N/A
    489731 6jmg:B (2.701) BS01 GTP ? GO:0003924 ... Q7ZYF1 N/A
    489732 6jmg:B (2.701) BS02 MG ? GO:0003924 ... Q7ZYF1 N/A
    489733 6jmh:A (1.46) BS01 MI9 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    489734 6jmh:A (1.46) BS02 WAA 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    489735 6jmh:B (1.46) BS01 MI9 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    489736 6jmh:B (1.46) BS02 WAA 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    489737 6jmn:A (2.5) BS01 BV0 ? GO:0004553 ... Q4AE59 31928006 MOAD: Kd=0.085uM
    489738 6jmq:A (3.31) BS01 CLR ? GO:0002720 ... Q01650 31160781
    489739 6jmq:A (3.31) BS02 CLR ? GO:0002720 ... Q01650 31160781
    489740 6jmq:B (3.31) BS01 CLR ? GO:0001618 ... P08195 31160781
    489741 6jmt:A (2.8) BS01 peptide ? GO:0005096 ... Q9JLQ2 32780989
    489742 6jmt:A (2.8) BS02 ZN ? GO:0005096 ... Q9JLQ2 32780989
    489743 6jmt:B (2.8) BS01 peptide ? GO:0005096 ... Q9JLQ2 32780989
    489744 6jmt:B (2.8) BS02 ZN ? GO:0005096 ... Q9JLQ2 32780989
    489745 6jmt:C (2.8) BS01 peptide ? GO:0005096 ... Q9JLQ2 32780989
    489746 6jmt:C (2.8) BS02 ZN ? GO:0005096 ... Q9JLQ2 32780989
    489747 6jmt:D (2.8) BS01 peptide ? GO:0005096 ... Q9JLQ2 32780989
    489748 6jmt:D (2.8) BS02 ZN ? GO:0005096 ... Q9JLQ2 32780989
    489749 6jmt:E (2.8) BS01 peptide ? GO:0005096 ... Q9JLQ2 32780989
    489750 6jmt:E (2.8) BS02 ZN ? GO:0005096 ... Q9JLQ2 32780989
    489751 6jmt:F (2.8) BS01 peptide ? GO:0005096 ... Q9JLQ2 32780989
    489752 6jmt:F (2.8) BS02 ZN ? GO:0005096 ... Q9JLQ2 32780989
    489753 6jmu:A (2.0) BS01 peptide ? GO:0005096 ... Q68FF6 32780989
    489754 6jmu:B (2.0) BS01 peptide ? GO:0005096 ... Q68FF6 32780989
    489755 6jmv:A (1.832) BS01 SYM ? GO:0015276 ... P42264 31311973
    489756 6jmv:A (1.832) BS02 ZN ? GO:0015276 ... P42264 31311973
    489757 6jmv:A (1.832) BS03 ZN ? GO:0015276 ... P42264 31311973
    489758 6jmv:B (1.832) BS01 ZN ? GO:0015276 ... P42264 31311973
    489759 6jmv:B (1.832) BS02 SYM ? GO:0015276 ... P42264 31311973
    489760 6jmw:A (1.85) BS01 BW9 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    489761 6jmw:A (1.85) BS02 WAA 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    489762 6jmw:B (1.85) BS01 BW9 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    489763 6jmw:B (1.85) BS02 WAA 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    489764 6jmx:A (1.859) BS01 ZN N/A N/A N/A 31974386
    489765 6jmy:A (1.661) BS01 ZN N/A N/A N/A 31974386
    489766 6jmz:A (1.92) BS01 ZN N/A N/A N/A 31974386
    489767 6jn0:A (2.164) BS01 dna N/A N/A N/A 31974386
    489768 6jn0:A (2.164) BS02 ZN N/A N/A N/A 31974386
    489769 6jn1:A (2.382) BS01 peptide N/A N/A N/A 31974386
    489770 6jn1:A (2.382) BS02 ZN N/A N/A N/A 31974386
    489771 6jn3:A (2.216) BS01 BX6 3.5.2.6 GO:0008800 ... Q9F663 31269398
    489772 6jn3:B (2.216) BS01 BX6 3.5.2.6 GO:0008800 ... Q9F663 31269398
    489773 6jn3:C (2.216) BS01 BX6 3.5.2.6 GO:0008800 ... Q9F663 31269398
    489774 6jn3:D (2.216) BS01 BX6 3.5.2.6 GO:0008800 ... Q9F663 31269398
    489775 6jn3:D (2.216) BS02 BX6 3.5.2.6 GO:0008800 ... Q9F663 31269398
    489776 6jn4:A (1.9) BS01 BX9 3.5.2.6 GO:0008800 ... Q9F663 31269398
    489777 6jn4:B (1.9) BS01 BX9 3.5.2.6 GO:0008800 ... Q9F663 31269398
    489778 6jn4:C (1.9) BS01 BX9 3.5.2.6 GO:0008800 ... Q9F663 31269398
    489779 6jn4:D (1.9) BS01 BX9 3.5.2.6 GO:0008800 ... Q9F663 31269398
    489780 6jn4:D (1.9) BS02 BX9 3.5.2.6 GO:0008800 ... Q9F663 31269398
    489781 6jn5:A (1.97) BS01 BXU 3.5.2.6 GO:0008800 ... Q9F663 31269398
    489782 6jn5:B (1.97) BS01 BXU 3.5.2.6 GO:0008800 ... Q9F663 31269398
    489783 6jn5:C (1.97) BS01 BXU 3.5.2.6 GO:0008800 ... Q9F663 31269398
    489784 6jn5:D (1.97) BS01 BXU 3.5.2.6 GO:0008800 ... Q9F663 31269398
    489785 6jn5:D (1.97) BS02 BXU 3.5.2.6 GO:0008800 ... Q9F663 31269398
    489786 6jn6:A (1.602) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 31269398
    489787 6jn6:A (1.602) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 31269398
    489788 6jn6:A (1.602) BS03 BY0 3.5.2.6 GO:0016787 ... Q9K2N0 31269398 MOAD: Ki=0.07uM
    489789 6jn6:B (1.602) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 31269398
    489790 6jn6:B (1.602) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 31269398
    489791 6jn6:B (1.602) BS03 BY0 3.5.2.6 GO:0016787 ... Q9K2N0 31269398 MOAD: Ki=0.07uM
    489792 6jn7:A (2.04) BS01 ZN N/A N/A N/A 31974386
    489793 6jn7:B (2.04) BS01 ZN N/A N/A N/A 31974386
    489794 6jn7:C (2.04) BS01 ZN N/A N/A N/A 31974386
    489795 6jn8:A (2.106) BS01 ZN N/A N/A N/A 31974386
    489796 6jnf:A (3.81) BS01 46E ? GO:0005515 ... P23644 31600774
    489797 6jnf:F (3.81) BS01 46E ? GO:0005515 ... P23644 31600774
    489798 6jnh:A (2.0) BS01 ASC 2.7.7.3 GO:0003824 ... A0A059ZFC5 N/A
    489799 6jnh:A (2.0) BS02 ASC 2.7.7.3 GO:0003824 ... A0A059ZFC5 N/A
    489800 6jni:A (2.9) BS01 dna ? GO:0003677 ... Q93TP7 31548408

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).