SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    491801 6k1i:C (2.75) BS02 dna ? GO:0000077 ... P16104 31848352
    491802 6k1i:D (2.75) BS01 dna ? GO:0000786 ... P06899 31848352
    491803 6k1i:D (2.75) BS02 dna ? GO:0000786 ... P06899 31848352
    491804 6k1i:E (2.75) BS01 dna ? GO:0000786 ... P68431 31848352
    491805 6k1i:E (2.75) BS02 dna ? GO:0000786 ... P68431 31848352
    491806 6k1i:F (2.75) BS01 dna ? GO:0000781 ... P62805 31848352
    491807 6k1i:F (2.75) BS02 dna ? GO:0000781 ... P62805 31848352
    491808 6k1i:G (2.75) BS01 dna ? GO:0000077 ... P16104 31848352
    491809 6k1i:G (2.75) BS02 dna ? GO:0000077 ... P16104 31848352
    491810 6k1i:H (2.75) BS01 dna ? GO:0000786 ... P06899 31848352
    491811 6k1i:H (2.75) BS02 dna ? GO:0000786 ... P06899 31848352
    491812 6k1j:A (2.85) BS01 dna ? GO:0000786 ... P68431 31848352
    491813 6k1j:A (2.85) BS02 dna ? GO:0000786 ... P68431 31848352
    491814 6k1j:B (2.85) BS01 dna ? GO:0000781 ... P62805 31848352
    491815 6k1j:B (2.85) BS02 dna ? GO:0000781 ... P62805 31848352
    491816 6k1j:C (2.85) BS01 dna ? GO:0000077 ... P16104 31848352
    491817 6k1j:C (2.85) BS02 dna ? GO:0000077 ... P16104 31848352
    491818 6k1j:D (2.85) BS01 dna ? GO:0000786 ... P06899 31848352
    491819 6k1j:D (2.85) BS02 dna ? GO:0000786 ... P06899 31848352
    491820 6k1j:E (2.85) BS01 dna ? GO:0000786 ... P68431 31848352
    491821 6k1j:E (2.85) BS02 dna ? GO:0000786 ... P68431 31848352
    491822 6k1j:F (2.85) BS01 dna ? GO:0000781 ... P62805 31848352
    491823 6k1j:F (2.85) BS02 dna ? GO:0000781 ... P62805 31848352
    491824 6k1j:G (2.85) BS01 dna ? GO:0000077 ... P16104 31848352
    491825 6k1j:G (2.85) BS02 dna ? GO:0000077 ... P16104 31848352
    491826 6k1j:H (2.85) BS01 dna ? GO:0000786 ... P06899 31848352
    491827 6k1j:H (2.85) BS02 dna ? GO:0000786 ... P06899 31848352
    491828 6k1k:A (2.2) BS01 dna ? GO:0000786 ... P68431 31848352
    491829 6k1k:A (2.2) BS02 dna ? GO:0000786 ... P68431 31848352
    491830 6k1k:B (2.2) BS01 dna ? GO:0000781 ... P62805 31848352
    491831 6k1k:B (2.2) BS02 dna ? GO:0000781 ... P62805 31848352
    491832 6k1k:C (2.2) BS01 dna ? GO:0000077 ... P16104 31848352
    491833 6k1k:C (2.2) BS02 dna ? GO:0000077 ... P16104 31848352
    491834 6k1k:D (2.2) BS01 dna ? GO:0000786 ... P06899 31848352
    491835 6k1k:D (2.2) BS02 dna ? GO:0000786 ... P06899 31848352
    491836 6k1k:E (2.2) BS01 dna ? GO:0000786 ... P68431 31848352
    491837 6k1k:E (2.2) BS02 dna ? GO:0000786 ... P68431 31848352
    491838 6k1k:F (2.2) BS01 dna ? GO:0000781 ... P62805 31848352
    491839 6k1k:F (2.2) BS02 dna ? GO:0000781 ... P62805 31848352
    491840 6k1k:G (2.2) BS01 dna ? GO:0000077 ... P16104 31848352
    491841 6k1k:G (2.2) BS02 dna ? GO:0000077 ... P16104 31848352
    491842 6k1k:H (2.2) BS01 dna ? GO:0000786 ... P06899 31848352
    491843 6k1k:H (2.2) BS02 dna ? GO:0000786 ... P06899 31848352
    491844 6k1l:A (2.46) BS01 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491845 6k1l:A (2.46) BS02 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491846 6k1l:B (2.46) BS01 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491847 6k1l:B (2.46) BS02 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491848 6k1l:B (2.46) BS03 PYR 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491849 6k1l:C (2.46) BS01 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491850 6k1l:C (2.46) BS02 PYR 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491851 6k1l:C (2.46) BS03 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491852 6k1l:D (2.46) BS01 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491853 6k1l:D (2.46) BS02 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491854 6k1m:A (2.32) BS01 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491855 6k1m:A (2.32) BS02 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491856 6k1m:B (2.32) BS01 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491857 6k1m:B (2.32) BS02 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491858 6k1m:B (2.32) BS03 PYR 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491859 6k1m:C (2.32) BS01 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491860 6k1m:C (2.32) BS02 PYR 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491861 6k1m:C (2.32) BS03 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491862 6k1m:D (2.32) BS01 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491863 6k1m:D (2.32) BS02 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491864 6k1n:A (2.26) BS01 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491865 6k1n:B (2.26) BS01 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491866 6k1n:C (2.26) BS01 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491867 6k1n:D (2.26) BS01 PLP 4.4.1.1 GO:0003962 ... B4SII9 33497694
    491868 6k1p:A (3.87) BS01 dna ? GO:0000786 ... A0A310TTQ1 30872815
    491869 6k1p:A (3.87) BS02 dna ? GO:0000786 ... A0A310TTQ1 30872815
    491870 6k1p:B (3.87) BS01 dna ? GO:0000786 ... P62799 30872815
    491871 6k1p:B (3.87) BS02 dna ? GO:0000786 ... P62799 30872815
    491872 6k1p:C (3.87) BS01 dna ? GO:0000786 ... Q6AZJ8 30872815
    491873 6k1p:C (3.87) BS02 dna ? GO:0000786 ... Q6AZJ8 30872815
    491874 6k1p:D (3.87) BS01 dna ? GO:0000786 ... P02281 30872815
    491875 6k1p:D (3.87) BS02 dna ? GO:0000786 ... P02281 30872815
    491876 6k1p:E (3.87) BS01 dna ? GO:0000786 ... A0A310TTQ1 30872815
    491877 6k1p:E (3.87) BS02 dna ? GO:0000786 ... A0A310TTQ1 30872815
    491878 6k1p:F (3.87) BS01 dna ? GO:0000786 ... P62799 30872815
    491879 6k1p:F (3.87) BS02 dna ? GO:0000786 ... P62799 30872815
    491880 6k1p:G (3.87) BS01 dna ? GO:0000786 ... Q6AZJ8 30872815
    491881 6k1p:G (3.87) BS02 dna ? GO:0000786 ... Q6AZJ8 30872815
    491882 6k1p:H (3.87) BS01 dna ? GO:0000786 ... P02281 30872815
    491883 6k1p:H (3.87) BS02 dna ? GO:0000786 ... P02281 30872815
    491884 6k1p:K (3.87) BS01 dna 3.6.4.- GO:0000182 ... P38144 30872815
    491885 6k1p:K (3.87) BS02 dna 3.6.4.- GO:0000182 ... P38144 30872815
    491886 6k1p:K (3.87) BS03 BEF 3.6.4.- GO:0000182 ... P38144 30872815
    491887 6k1p:K (3.87) BS04 ADP 3.6.4.- GO:0000182 ... P38144 30872815
    491888 6k1q:A (2.7) BS01 D2U 3.2.1.17 GO:0003796 ... P00720
    P24530
    31263780
    491889 6k1r:A (2.55) BS01 KPL 1.1.1.169 GO:0005737 ... Q9HW09 34757166
    491890 6k1r:A (2.55) BS02 NAD 1.1.1.169 GO:0005737 ... Q9HW09 34757166
    491891 6k1r:B (2.55) BS01 KPL 1.1.1.169 GO:0005737 ... Q9HW09 34757166
    491892 6k1r:B (2.55) BS02 NAD 1.1.1.169 GO:0005737 ... Q9HW09 34757166
    491893 6k1r:C (2.55) BS01 KPL 1.1.1.169 GO:0005737 ... Q9HW09 34757166
    491894 6k1s:A (2.6) BS01 CUX 2.1.1.320 GO:0000387 ... O14744 31312404 BindingDB: IC50=20nM
    491895 6k1z:A (2.307) BS01 FAR 3.6.1.-
    3.6.5.-
    GO:0000139 ... P32455 31216343
    491896 6k20:A (2.58) BS01 MG 2.7.7.108 GO:0000287 ... P77649 N/A
    491897 6k21:A (2.0) BS01 MG 3.6.1.1 GO:0000287 ... A0A0A7XPH7 31500178
    491898 6k22:A (2.747) BS01 CA ? GO:0001786 ... P08758 31605770
    491899 6k22:A (2.747) BS02 CA ? GO:0001786 ... P08758 31605770
    491900 6k22:A (2.747) BS03 CA ? GO:0001786 ... P08758 31605770
    491901 6k23:A (2.8) BS01 NAD N/A GO:0004318 ... N/A N/A
    491902 6k23:B (2.8) BS01 NAD N/A GO:0004318 ... N/A N/A
    491903 6k23:C (2.8) BS01 NAD N/A GO:0004318 ... N/A N/A
    491904 6k23:D (2.8) BS01 NAD N/A GO:0004318 ... N/A N/A
    491905 6k24:A (2.1) BS01 WAA 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    491906 6k24:A (2.1) BS02 CV0 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    491907 6k24:B (2.1) BS01 WAA 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    491908 6k24:B (2.1) BS02 CV0 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    491909 6k27:A (1.86) BS01 MG 3.6.1.1 GO:0000287 ... A0A0A7XPH7 31500178
    491910 6k27:A (1.86) BS02 MG 3.6.1.1 GO:0000287 ... A0A0A7XPH7 31500178
    491911 6k27:B (1.86) BS01 MG 3.6.1.1 GO:0000287 ... A0A0A7XPH7 31500178
    491912 6k27:B (1.86) BS02 MG 3.6.1.1 GO:0000287 ... A0A0A7XPH7 31500178
    491913 6k27:C (1.86) BS01 MG 3.6.1.1 GO:0000287 ... A0A0A7XPH7 31500178
    491914 6k27:C (1.86) BS02 MG 3.6.1.1 GO:0000287 ... A0A0A7XPH7 31500178
    491915 6k27:D (1.86) BS01 MG 3.6.1.1 GO:0000287 ... A0A0A7XPH7 31500178
    491916 6k27:D (1.86) BS02 MG 3.6.1.1 GO:0000287 ... A0A0A7XPH7 31500178
    491917 6k27:E (1.86) BS01 MG 3.6.1.1 GO:0000287 ... A0A0A7XPH7 31500178
    491918 6k27:E (1.86) BS02 MG 3.6.1.1 GO:0000287 ... A0A0A7XPH7 31500178
    491919 6k27:F (1.86) BS01 MG 3.6.1.1 GO:0000287 ... A0A0A7XPH7 31500178
    491920 6k27:F (1.86) BS02 MG 3.6.1.1 GO:0000287 ... A0A0A7XPH7 31500178
    491921 6k27:F (1.86) BS03 MG 3.6.1.1 GO:0000287 ... A0A0A7XPH7 31500178
    491922 6k27:G (1.86) BS01 MG 3.6.1.1 GO:0000287 ... A0A0A7XPH7 31500178
    491923 6k27:H (1.86) BS01 MG 3.6.1.1 GO:0000287 ... A0A0A7XPH7 31500178
    491924 6k28:A (2.002) BS01 TZE N/A GO:0000287 ... N/A 31439375
    491925 6k28:A (2.002) BS02 MG N/A GO:0000287 ... N/A 31439375
    491926 6k28:B (2.002) BS01 TZE N/A GO:0000287 ... N/A 31439375
    491927 6k28:B (2.002) BS02 MG N/A GO:0000287 ... N/A 31439375
    491928 6k28:C (2.002) BS01 TZE N/A GO:0000287 ... N/A 31439375
    491929 6k28:C (2.002) BS02 MG N/A GO:0000287 ... N/A 31439375
    491930 6k2j:A (2.4) BS01 dna ? GO:0003677 ... B8H4R9 32756896
    491931 6k2j:B (2.4) BS01 dna ? GO:0003677 ... B8H4R9 32756896
    491932 6k2j:C (2.4) BS01 dna ? GO:0003677 ... B8H4R9 32756896
    491933 6k2k:A (-1.00) BS01 ZN 2.3.2.27 N/A Q969V5 31235254
    491934 6k2k:A (-1.00) BS02 ZN 2.3.2.27 N/A Q969V5 31235254
    491935 6k2l:A (2.5) BS01 FAD ? GO:0000166 ... A0KMJ5 31477273
    491936 6k2l:B (2.5) BS01 FAD ? GO:0000166 ... A0KMJ5 31477273
    491937 6k2m:E (3.19) BS01 ARG ? GO:0003677 ... B5TV91 N/A
    491938 6k2n:B (1.8) BS01 GAL ? GO:0019028 ... E2EA82 31620994
    491939 6k2o:A (2.296) BS01 GAL ? GO:0019028 ... E2EA82 31620994
    491940 6k2p:A (1.6) BS01 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    491941 6k2p:A (1.6) BS02 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    491942 6k2q:A (2.0) BS01 ADE 3.2.2.9 GO:0003824 ... A0KIZ1 31274299
    491943 6k2q:B (2.0) BS01 ADE 3.2.2.9 GO:0003824 ... A0KIZ1 31274299
    491944 6k2q:C (2.0) BS01 ADE 3.2.2.9 GO:0003824 ... A0KIZ1 31274299
    491945 6k2q:D (2.0) BS01 ADE 3.2.2.9 GO:0003824 ... A0KIZ1 31274299
    491946 6k2r:A (1.6) BS01 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    491947 6k2r:A (1.6) BS02 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    491948 6k2s:A (1.6) BS01 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    491949 6k2s:A (1.6) BS02 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    491950 6k2t:A (1.6) BS01 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    491951 6k2t:A (1.6) BS02 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    491952 6k2u:B (2.554) BS01 APR ? N/A P0CG48 32330457
    491953 6k2u:B (2.554) BS02 ZN ? N/A P0CG48 32330457
    491954 6k2v:A (1.6) BS01 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    491955 6k2v:A (1.6) BS02 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    491956 6k2w:A (1.7) BS01 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    491957 6k2w:A (1.7) BS02 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    491958 6k2z:A (2.0) BS01 GAL ? GO:0005515 ... Q8TCE9 32525264
    491959 6k2z:A (2.0) BS02 GAL ? GO:0005515 ... Q8TCE9 32525264
    491960 6k2z:B (2.0) BS01 GAL ? GO:0005515 ... Q8TCE9 32525264
    491961 6k2z:B (2.0) BS02 GAL ? GO:0005515 ... Q8TCE9 32525264
    491962 6k30:B (2.684) BS01 FE 1.14.11.81 N/A Q5AR53 N/A
    491963 6k30:B (2.684) BS02 CV3 1.14.11.81 N/A Q5AR53 N/A
    491964 6k31:A (2.6) BS01 CO N/A N/A N/A 31662435
    491965 6k31:B (2.6) BS01 CO N/A N/A N/A 31662435
    491966 6k32:A (3.2) BS01 rna ? GO:0001172 ... D0EZK6 31629769
    491967 6k32:A (3.2) BS02 rna ? GO:0001172 ... D0EZK6 31629769
    491968 6k32:A (3.2) BS03 MG ? GO:0001172 ... D0EZK6 31629769
    491969 6k32:A (3.2) BS04 MG7 ? GO:0001172 ... D0EZK6 31629769
    491970 6k32:A (3.2) BS05 A2M ? GO:0001172 ... D0EZK6 31629769
    491971 6k32:A (3.2) BS06 UTP ? GO:0001172 ... D0EZK6 31629769
    491972 6k33:a1 (2.74) BS01 CLA N/A GO:0009521 ... N/A 32393811
    491973 6k33:a1 (2.74) BS02 CLA N/A GO:0009521 ... N/A 32393811
    491974 6k33:a1 (2.74) BS03 CLA N/A GO:0009521 ... N/A 32393811
    491975 6k33:a1 (2.74) BS04 CLA N/A GO:0009521 ... N/A 32393811
    491976 6k33:a1 (2.74) BS05 CLA N/A GO:0009521 ... N/A 32393811
    491977 6k33:a1 (2.74) BS06 CLA N/A GO:0009521 ... N/A 32393811
    491978 6k33:a1 (2.74) BS07 CLA N/A GO:0009521 ... N/A 32393811
    491979 6k33:a1 (2.74) BS08 CLA N/A GO:0009521 ... N/A 32393811
    491980 6k33:a1 (2.74) BS09 CLA N/A GO:0009521 ... N/A 32393811
    491981 6k33:a1 (2.74) BS10 CLA N/A GO:0009521 ... N/A 32393811
    491982 6k33:a1 (2.74) BS11 CLA N/A GO:0009521 ... N/A 32393811
    491983 6k33:a1 (2.74) BS12 CLA N/A GO:0009521 ... N/A 32393811
    491984 6k33:a1 (2.74) BS13 CLA N/A GO:0009521 ... N/A 32393811
    491985 6k33:a1 (2.74) BS14 CLA N/A GO:0009521 ... N/A 32393811
    491986 6k33:a1 (2.74) BS15 CLA N/A GO:0009521 ... N/A 32393811
    491987 6k33:a1 (2.74) BS16 CLA N/A GO:0009521 ... N/A 32393811
    491988 6k33:a1 (2.74) BS17 CLA N/A GO:0009521 ... N/A 32393811
    491989 6k33:a1 (2.74) BS18 CLA N/A GO:0009521 ... N/A 32393811
    491990 6k33:a2 (2.74) BS01 CLA N/A GO:0009521 ... N/A 32393811
    491991 6k33:a2 (2.74) BS02 CLA N/A GO:0009521 ... N/A 32393811
    491992 6k33:a2 (2.74) BS03 CLA N/A GO:0009521 ... N/A 32393811
    491993 6k33:a2 (2.74) BS04 CLA N/A GO:0009521 ... N/A 32393811
    491994 6k33:a2 (2.74) BS05 CLA N/A GO:0009521 ... N/A 32393811
    491995 6k33:a2 (2.74) BS06 CLA N/A GO:0009521 ... N/A 32393811
    491996 6k33:a2 (2.74) BS07 CLA N/A GO:0009521 ... N/A 32393811
    491997 6k33:a2 (2.74) BS08 CLA N/A GO:0009521 ... N/A 32393811
    491998 6k33:a2 (2.74) BS09 CLA N/A GO:0009521 ... N/A 32393811
    491999 6k33:a2 (2.74) BS10 CLA N/A GO:0009521 ... N/A 32393811
    492000 6k33:a2 (2.74) BS11 CLA N/A GO:0009521 ... N/A 32393811

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).