SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    493201 6k61:b (2.37) BS22 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493202 6k61:b (2.37) BS23 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493203 6k61:b (2.37) BS24 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493204 6k61:b (2.37) BS25 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493205 6k61:b (2.37) BS26 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493206 6k61:b (2.37) BS27 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493207 6k61:b (2.37) BS28 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493208 6k61:b (2.37) BS29 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493209 6k61:b (2.37) BS30 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493210 6k61:b (2.37) BS31 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493211 6k61:b (2.37) BS32 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493212 6k61:b (2.37) BS33 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493213 6k61:b (2.37) BS34 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493214 6k61:b (2.37) BS35 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493215 6k61:b (2.37) BS36 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493216 6k61:b (2.37) BS37 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493217 6k61:b (2.37) BS38 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493218 6k61:b (2.37) BS39 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493219 6k61:b (2.37) BS40 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493220 6k61:b (2.37) BS41 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493221 6k61:b (2.37) BS42 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493222 6k61:b (2.37) BS43 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493223 6k61:b (2.37) BS44 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493224 6k61:b (2.37) BS45 PQN 1.97.1.12 GO:0000287 ... P58565 31595062
    493225 6k61:b (2.37) BS46 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493226 6k61:b (2.37) BS47 CLA 1.97.1.12 GO:0000287 ... P58565 31595062
    493227 6k61:c (2.37) BS01 SF4 1.97.1.12 GO:0009055 ... P0A410 31595062
    493228 6k61:c (2.37) BS02 SF4 1.97.1.12 GO:0009055 ... P0A410 31595062
    493229 6k61:f (2.37) BS01 CLA ? GO:0009522 ... P58564 31595062
    493230 6k61:f (2.37) BS02 CLA ? GO:0009522 ... P58564 31595062
    493231 6k61:f (2.37) BS03 CLA ? GO:0009522 ... P58564 31595062
    493232 6k61:f (2.37) BS04 CLA ? GO:0009522 ... P58564 31595062
    493233 6k61:f (2.37) BS05 CLA ? GO:0009522 ... P58564 31595062
    493234 6k61:i (2.37) BS01 CLA ? GO:0009522 ... P58560 31595062
    493235 6k61:i (2.37) BS02 CLA ? GO:0009522 ... P58560 31595062
    493236 6k61:j (2.37) BS01 CLA ? GO:0009522 ... P58568 31595062
    493237 6k61:j (2.37) BS02 CLA ? GO:0009522 ... P58568 31595062
    493238 6k61:j (2.37) BS03 CLA ? GO:0009522 ... P58568 31595062
    493239 6k61:j (2.37) BS04 CLA ? GO:0009522 ... P58568 31595062
    493240 6k61:k (2.37) BS01 CLA ? GO:0009522 ... P58583 31595062
    493241 6k61:k (2.37) BS02 CLA ? GO:0009522 ... P58583 31595062
    493242 6k61:k (2.37) BS03 CLA ? GO:0009522 ... P58583 31595062
    493243 6k61:k (2.37) BS04 CLA ? GO:0009522 ... P58583 31595062
    493244 6k61:l (2.37) BS01 CLA ? GO:0009522 ... P58577 31595062
    493245 6k61:l (2.37) BS02 CLA ? GO:0009522 ... P58577 31595062
    493246 6k61:l (2.37) BS03 CLA ? GO:0009522 ... P58577 31595062
    493247 6k61:l (2.37) BS04 CLA ? GO:0009522 ... P58577 31595062
    493248 6k61:l (2.37) BS05 CLA ? GO:0009522 ... P58577 31595062
    493249 6k61:l (2.37) BS06 CLA ? GO:0009522 ... P58577 31595062
    493250 6k61:l (2.37) BS07 CLA ? GO:0009522 ... P58577 31595062
    493251 6k61:l (2.37) BS08 CLA ? GO:0009522 ... P58577 31595062
    493252 6k61:m (2.37) BS01 CLA ? GO:0009522 ... Q8YNB0 31595062
    493253 6k61:m (2.37) BS02 CLA ? GO:0009522 ... Q8YNB0 31595062
    493254 6k61:x (2.37) BS01 CLA ? GO:0009522 ... P58566 31595062
    493255 6k63:A (2.073) BS01 ZN 3.5.4.5 GO:0003824 ... A6TBN1 31495495
    493256 6k63:B (2.073) BS01 ZN 3.5.4.5 GO:0003824 ... A6TBN1 31495495
    493257 6k63:C (2.073) BS01 ZN 3.5.4.5 GO:0003824 ... A6TBN1 31495495
    493258 6k63:D (2.073) BS01 ZN 3.5.4.5 GO:0003824 ... A6TBN1 31495495
    493259 6k67:B (1.95) BS01 CA ? GO:0005509 ... P0DP25 31371498
    493260 6k67:B (1.95) BS02 CA ? GO:0005509 ... P0DP25 31371498
    493261 6k67:D (1.95) BS01 CA ? GO:0005509 ... P0DP25 31371498
    493262 6k67:D (1.95) BS02 CA ? GO:0005509 ... P0DP25 31371498
    493263 6k6i:A (1.9) BS01 RET N/A GO:0016020 ... N/A N/A
    493264 6k6j:A (2.5) BS01 RET N/A GO:0016020 ... N/A N/A
    493265 6k6k:A (2.197) BS01 RET N/A GO:0016020 ... N/A N/A
    493266 6k6s:A (2.993) BS01 MN 3.1.-.- GO:0003723 ... Q8CT16 N/A
    493267 6k6s:A (2.993) BS02 MN 3.1.-.- GO:0003723 ... Q8CT16 N/A
    493268 6k6s:B (2.993) BS01 MN 3.1.-.- GO:0003723 ... Q8CT16 N/A
    493269 6k6s:B (2.993) BS02 MN 3.1.-.- GO:0003723 ... Q8CT16 N/A
    493270 6k6t:A (2.2) BS01 C2I 3.1.4.1 GO:0000166 ... A0A0H3AJ04 N/A
    493271 6k6t:A (2.2) BS02 CA 3.1.4.1 GO:0000166 ... A0A0H3AJ04 N/A
    493272 6k6t:A (2.2) BS03 CA 3.1.4.1 GO:0000166 ... A0A0H3AJ04 N/A
    493273 6k6t:B (2.2) BS01 C2I 3.1.4.1 GO:0000166 ... A0A0H3AJ04 N/A
    493274 6k6t:B (2.2) BS02 CA 3.1.4.1 GO:0000166 ... A0A0H3AJ04 N/A
    493275 6k6t:B (2.2) BS03 CA 3.1.4.1 GO:0000166 ... A0A0H3AJ04 N/A
    493276 6k6t:C (2.2) BS01 C2I 3.1.4.1 GO:0000166 ... A0A0H3AJ04 N/A
    493277 6k6t:C (2.2) BS02 CA 3.1.4.1 GO:0000166 ... A0A0H3AJ04 N/A
    493278 6k6t:C (2.2) BS03 CA 3.1.4.1 GO:0000166 ... A0A0H3AJ04 N/A
    493279 6k6t:D (2.2) BS01 C2I 3.1.4.1 GO:0000166 ... A0A0H3AJ04 N/A
    493280 6k6t:D (2.2) BS02 CA 3.1.4.1 GO:0000166 ... A0A0H3AJ04 N/A
    493281 6k6t:D (2.2) BS03 CA 3.1.4.1 GO:0000166 ... A0A0H3AJ04 N/A
    493282 6k6v:A (1.98) BS01 U1Y 3.2.1.21 GO:0004553 ... Q9XEI3 36151080
    493283 6k6v:A (1.98) BS02 BGC 3.2.1.21 GO:0004553 ... Q9XEI3 36151080
    493284 6k6w:A (2.7) BS01 MN 3.1.-.- GO:0003723 ... Q8CST0 N/A
    493285 6k6w:B (2.7) BS01 MN 3.1.-.- GO:0003723 ... Q8CST0 N/A
    493286 6k6w:C (2.7) BS01 MN 3.1.-.- GO:0003723 ... Q8CST0 N/A
    493287 6k6w:D (2.7) BS01 MN 3.1.-.- GO:0003723 ... Q8CST0 N/A
    493288 6k71:P (4.3) BS01 peptide 3.6.5.3 GO:0000049 ... P41091 31048492
    493289 6k72:P (4.6) BS01 peptide 3.6.5.3 GO:0000049 ... P41091 31048492
    493290 6k74:A (2.28) BS01 ANP N/A GO:0004672 ... N/A N/A
    493291 6k76:A (3.05) BS01 ANP 2.7.1.30 GO:0004370 ... O93623 N/A
    493292 6k76:B (3.05) BS01 ANP 2.7.1.30 GO:0004370 ... O93623 N/A
    493293 6k77:A (2.4) BS01 ANP N/A GO:0004672 ... N/A N/A
    493294 6k7c:A (1.15) BS01 HEC ? GO:0005506 ... D4ZE39 31437585
    493295 6k7c:A (1.15) BS02 HEC ? GO:0005506 ... D4ZE39 31437585
    493296 6k7c:C (1.15) BS01 HEC ? GO:0005506 ... D4ZE39 31437585
    493297 6k7c:C (1.15) BS02 HEC ? GO:0005506 ... D4ZE39 31437585
    493298 6k7f:A (1.8) BS01 GLC ? GO:0005515 ... P0AEX9
    P53220
    31449839
    493299 6k7f:A (1.8) BS02 GLC ? GO:0005515 ... P0AEX9
    P53220
    31449839
    493300 6k7g:C (3.3) BS01 Y01 ? GO:0005198 ... Q9NV96 31416931
    493301 6k7h:C (3.22) BS01 Y01 ? GO:0005198 ... Q9NV96 31416931
    493302 6k7i:A (3.22) BS01 ACP 7.6.2.1 GO:0000166 ... Q9Y2Q0 31416931
    493303 6k7i:C (3.22) BS01 Y01 ? GO:0005198 ... Q9NV96 31416931
    493304 6k7j:A (3.08) BS01 ACP 7.6.2.1 GO:0000166 ... Q9Y2Q0 31416931
    493305 6k7j:A (3.08) BS02 MG 7.6.2.1 GO:0000166 ... Q9Y2Q0 31416931
    493306 6k7j:C (3.08) BS01 Y01 ? GO:0005198 ... Q9NV96 31416931
    493307 6k7k:A (3.04) BS01 ADP 7.6.2.1 GO:0000166 ... Q9Y2Q0 31416931
    493308 6k7k:A (3.04) BS02 ALF 7.6.2.1 GO:0000166 ... Q9Y2Q0 31416931
    493309 6k7k:A (3.04) BS03 MG 7.6.2.1 GO:0000166 ... Q9Y2Q0 31416931
    493310 6k7k:C (3.04) BS01 Y01 ? GO:0005198 ... Q9NV96 31416931
    493311 6k7l:A (2.83) BS01 BEF 7.6.2.1 GO:0000166 ... Q9Y2Q0 31416931
    493312 6k7l:A (2.83) BS02 MG 7.6.2.1 GO:0000166 ... Q9Y2Q0 31416931
    493313 6k7l:A (2.83) BS03 Y01 7.6.2.1 GO:0000166 ... Q9Y2Q0 31416931
    493314 6k7l:C (2.83) BS01 Y01 ? GO:0005198 ... Q9NV96 31416931
    493315 6k7m:A (2.95) BS01 ALF 7.6.2.1 GO:0000166 ... Q9Y2Q0 31416931
    493316 6k7m:A (2.95) BS02 MG 7.6.2.1 GO:0000166 ... Q9Y2Q0 31416931
    493317 6k7m:A (2.95) BS03 D39 7.6.2.1 GO:0000166 ... Q9Y2Q0 31416931
    493318 6k7m:C (2.95) BS01 Y01 ? GO:0005198 ... Q9NV96 31416931
    493319 6k7n:A (2.84) BS01 ALF 7.6.2.1 GO:0000166 ... Q9Y2Q0 31416931
    493320 6k7n:A (2.84) BS02 Y01 7.6.2.1 GO:0000166 ... Q9Y2Q0 31416931
    493321 6k7n:A (2.84) BS03 MG 7.6.2.1 GO:0000166 ... Q9Y2Q0 31416931
    493322 6k7n:C (2.84) BS01 Y01 ? GO:0005198 ... Q9NV96 31416931
    493323 6k7r:A (1.54) BS01 UMP 2.1.1.45 GO:0004799 ... A0A423U5Z1 N/A
    493324 6k7r:A (1.54) BS02 UMP 2.1.1.45 GO:0004799 ... A0A423U5Z1 N/A
    493325 6k7r:B (1.54) BS01 UMP 2.1.1.45 GO:0004799 ... A0A423U5Z1 N/A
    493326 6k7r:B (1.54) BS02 UMP 2.1.1.45 GO:0004799 ... A0A423U5Z1 N/A
    493327 6k7s:A (1.56) BS01 UMP 2.1.1.45 GO:0004799 ... A0A423U5Z1 N/A
    493328 6k7s:A (1.56) BS02 D16 2.1.1.45 GO:0004799 ... A0A423U5Z1 N/A
    493329 6k7s:A (1.56) BS03 UMP 2.1.1.45 GO:0004799 ... A0A423U5Z1 N/A
    493330 6k7s:B (1.56) BS01 UMP 2.1.1.45 GO:0004799 ... A0A423U5Z1 N/A
    493331 6k7s:B (1.56) BS02 UMP 2.1.1.45 GO:0004799 ... A0A423U5Z1 N/A
    493332 6k7s:B (1.56) BS03 D16 2.1.1.45 GO:0004799 ... A0A423U5Z1 N/A
    493333 6k7t:A (1.6) BS01 peptide ? N/A A0A125R585 31498797
    493334 6k7x:A (3.27) BS01 PLX ? GO:0051560 ... Q8NE86 32862359
    493335 6k7x:B (3.27) BS01 PLX ? GO:0051560 ... Q8NE86 32862359
    493336 6k7x:C (3.27) BS01 PLX ? GO:0051560 ... Q8NE86 32862359
    493337 6k7x:D (3.27) BS01 PLX ? GO:0051560 ... Q8NE86 32862359
    493338 6k7x:K (3.27) BS01 PLX ? GO:0051560 ... Q8NE86 32862359
    493339 6k7x:L (3.27) BS01 PLX ? GO:0051560 ... Q8NE86 32862359
    493340 6k7x:M (3.27) BS01 PLX ? GO:0051560 ... Q8NE86 32862359
    493341 6k7x:N (3.27) BS01 PLX ? GO:0051560 ... Q8NE86 32862359
    493342 6k7y:A (3.6) BS01 PLX ? GO:0051560 ... Q8NE86 32862359
    493343 6k7y:B (3.6) BS01 PLX ? GO:0051560 ... Q8NE86 32862359
    493344 6k7y:C (3.6) BS01 PLX ? GO:0051560 ... Q8NE86 32862359
    493345 6k7y:C (3.6) BS02 PLX ? GO:0051560 ... Q8NE86 32862359
    493346 6k7y:D (3.6) BS01 PLX ? GO:0051560 ... Q8NE86 32862359
    493347 6k7y:N (3.6) BS01 PLX ? GO:0051560 ... Q8NE86 32862359
    493348 6k7y:O (3.6) BS01 PLX ? GO:0051560 ... Q8NE86 32862359
    493349 6k7y:P (3.6) BS01 PLX ? GO:0051560 ... Q8NE86 32862359
    493350 6k7y:P (3.6) BS02 PLX ? GO:0051560 ... Q8NE86 32862359
    493351 6k7y:Q (3.6) BS01 PLX ? GO:0051560 ... Q8NE86 32862359
    493352 6k80:A (1.28) BS01 ZCW 2.3.1.87 GO:0016747 ... Q94521 32796911
    493353 6k80:A (1.28) BS02 ZCW 2.3.1.87 GO:0016747 ... Q94521 32796911
    493354 6k80:A (1.28) BS03 ACO 2.3.1.87 GO:0016747 ... Q94521 32796911
    493355 6k81:A (2.28) BS01 peptide 3.4.17.17 GO:0001525 ... Q7L8A9 31908845
    493356 6k82:B (1.402) BS01 MG 2.3.2.27 N/A Q9SS90 N/A
    493357 6k83:A (2.39) BS01 MG 2.3.2.27 N/A Q9SS90 N/A
    493358 6k83:A (2.39) BS02 CA 2.3.2.27 N/A Q9SS90 N/A
    493359 6k83:A (2.39) BS03 CA 2.3.2.27 N/A Q9SS90 N/A
    493360 6k83:A (2.39) BS04 CA 2.3.2.27 N/A Q9SS90 N/A
    493361 6k83:B (2.39) BS01 MG 2.3.2.27 N/A Q9SS90 N/A
    493362 6k83:B (2.39) BS02 CA 2.3.2.27 N/A Q9SS90 N/A
    493363 6k83:B (2.39) BS03 CA 2.3.2.27 N/A Q9SS90 N/A
    493364 6k83:B (2.39) BS04 CA 2.3.2.27 N/A Q9SS90 N/A
    493365 6k83:C (2.39) BS01 MG 2.3.2.27 N/A Q9SS90 N/A
    493366 6k83:C (2.39) BS02 CA 2.3.2.27 N/A Q9SS90 N/A
    493367 6k83:C (2.39) BS03 CA 2.3.2.27 N/A Q9SS90 N/A
    493368 6k83:C (2.39) BS04 CA 2.3.2.27 N/A Q9SS90 N/A
    493369 6k83:D (2.39) BS01 MG 2.3.2.27 N/A Q9SS90 N/A
    493370 6k83:D (2.39) BS02 CA 2.3.2.27 N/A Q9SS90 N/A
    493371 6k83:D (2.39) BS03 CA 2.3.2.27 N/A Q9SS90 N/A
    493372 6k83:D (2.39) BS04 CA 2.3.2.27 N/A Q9SS90 N/A
    493373 6k83:E (2.39) BS01 MG 2.3.2.27 N/A Q9SS90 N/A
    493374 6k83:E (2.39) BS02 CA 2.3.2.27 N/A Q9SS90 N/A
    493375 6k83:E (2.39) BS03 CA 2.3.2.27 N/A Q9SS90 N/A
    493376 6k83:E (2.39) BS04 CA 2.3.2.27 N/A Q9SS90 N/A
    493377 6k83:F (2.39) BS01 MG 2.3.2.27 N/A Q9SS90 N/A
    493378 6k83:F (2.39) BS02 CA 2.3.2.27 N/A Q9SS90 N/A
    493379 6k83:F (2.39) BS03 CA 2.3.2.27 N/A Q9SS90 N/A
    493380 6k83:F (2.39) BS04 CA 2.3.2.27 N/A Q9SS90 N/A
    493381 6k83:G (2.39) BS01 MG 2.3.2.27 N/A Q9SS90 N/A
    493382 6k83:G (2.39) BS02 CA 2.3.2.27 N/A Q9SS90 N/A
    493383 6k83:G (2.39) BS03 CA 2.3.2.27 N/A Q9SS90 N/A
    493384 6k83:G (2.39) BS04 CA 2.3.2.27 N/A Q9SS90 N/A
    493385 6k83:H (2.39) BS01 MG 2.3.2.27 N/A Q9SS90 N/A
    493386 6k83:H (2.39) BS02 CA 2.3.2.27 N/A Q9SS90 N/A
    493387 6k83:H (2.39) BS03 CA 2.3.2.27 N/A Q9SS90 N/A
    493388 6k83:H (2.39) BS04 CA 2.3.2.27 N/A Q9SS90 N/A
    493389 6k85:B (1.606) BS01 MG 2.3.2.27 N/A Q9SS90 N/A
    493390 6k85:B (1.606) BS02 MG 2.3.2.27 N/A Q9SS90 N/A
    493391 6k86:B (1.593) BS01 MG 2.3.2.27 N/A Q9SS90 N/A
    493392 6k88:A (1.788) BS01 CA 2.3.2.27 N/A Q9SS90 N/A
    493393 6k88:A (1.788) BS02 CA 2.3.2.27 N/A Q9SS90 N/A
    493394 6k88:A (1.788) BS03 CA 2.3.2.27 N/A Q9SS90 N/A
    493395 6k88:A (1.788) BS04 CA 2.3.2.27 N/A Q9SS90 N/A
    493396 6k88:B (1.788) BS01 CA 2.3.2.27 N/A Q9SS90 N/A
    493397 6k88:B (1.788) BS02 CA 2.3.2.27 N/A Q9SS90 N/A
    493398 6k88:B (1.788) BS03 CA 2.3.2.27 N/A Q9SS90 N/A
    493399 6k88:B (1.788) BS04 CA 2.3.2.27 N/A Q9SS90 N/A
    493400 6k89:B (1.689) BS01 MG 2.3.2.27 N/A Q9SS90 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).