SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    493401 6k8a:A (2.4) BS01 CA 2.3.2.27 N/A Q9SS90 N/A
    493402 6k8a:A (2.4) BS02 CA 2.3.2.27 N/A Q9SS90 N/A
    493403 6k8a:A (2.4) BS03 CA 2.3.2.27 N/A Q9SS90 N/A
    493404 6k8a:B (2.4) BS01 CA 2.3.2.27 N/A Q9SS90 N/A
    493405 6k8a:B (2.4) BS02 CA 2.3.2.27 N/A Q9SS90 N/A
    493406 6k8a:B (2.4) BS03 CA 2.3.2.27 N/A Q9SS90 N/A
    493407 6k8b:A (2.21) BS01 CA 2.3.2.27 N/A Q9SS90 N/A
    493408 6k8b:A (2.21) BS02 CA 2.3.2.27 N/A Q9SS90 N/A
    493409 6k8b:A (2.21) BS03 CA 2.3.2.27 N/A Q9SS90 N/A
    493410 6k8b:A (2.21) BS04 MG 2.3.2.27 N/A Q9SS90 N/A
    493411 6k8b:B (2.21) BS01 CA 2.3.2.27 N/A Q9SS90 N/A
    493412 6k8b:B (2.21) BS02 CA 2.3.2.27 N/A Q9SS90 N/A
    493413 6k8b:B (2.21) BS03 CA 2.3.2.27 N/A Q9SS90 N/A
    493414 6k8b:B (2.21) BS04 MG 2.3.2.27 N/A Q9SS90 N/A
    493415 6k8d:A (2.94) BS01 UPG 2.7.7.9 GO:0003983 ... X2KZJ9 N/A
    493416 6k8d:B (2.94) BS01 UPG 2.7.7.9 GO:0003983 ... X2KZJ9 N/A
    493417 6k8d:C (2.94) BS01 UPG 2.7.7.9 GO:0003983 ... X2KZJ9 N/A
    493418 6k8d:D (2.94) BS01 UPG 2.7.7.9 GO:0003983 ... X2KZJ9 N/A
    493419 6k8h:A (1.9) BS01 PLR ? GO:0008483 ... D1C218 31560999
    493420 6k8h:A (1.9) BS02 PLR ? GO:0008483 ... D1C218 31560999
    493421 6k8h:B (1.9) BS01 PLR ? GO:0008483 ... D1C218 31560999
    493422 6k8i:A (2.697) BS01 FAD ? GO:0000325 ... Q96524 32398826
    493423 6k8i:B (2.697) BS01 FAD ? GO:0000325 ... Q96524 32398826
    493424 6k8k:A (2.5) BS01 FAD ? GO:0000325 ... Q96524 32398826
    493425 6k8k:A (2.5) BS02 AMP ? GO:0000325 ... Q96524 32398826
    493426 6k8k:A (2.5) BS03 MG ? GO:0000325 ... Q96524 32398826
    493427 6k8k:B (2.5) BS01 FAD ? GO:0000325 ... Q96524 32398826
    493428 6k8k:B (2.5) BS02 AMP ? GO:0000325 ... Q96524 32398826
    493429 6k8k:D (2.5) BS01 FAD ? GO:0000325 ... Q96524 32398826
    493430 6k8k:D (2.5) BS02 AMP ? GO:0000325 ... Q96524 32398826
    493431 6k8k:D (2.5) BS03 MG ? GO:0000325 ... Q96524 32398826
    493432 6k8k:G (2.5) BS01 FAD ? GO:0000325 ... Q96524 32398826
    493433 6k8k:G (2.5) BS02 AMP ? GO:0000325 ... Q96524 32398826
    493434 6k8k:G (2.5) BS03 MG ? GO:0000325 ... Q96524 32398826
    493435 6k8m:E (1.45) BS01 TOU 3.4.21.64 GO:0004252 ... P06873 N/A
    493436 6k8m:E (1.45) BS02 TOU 3.4.21.64 GO:0004252 ... P06873 N/A
    493437 6k8n:A (2.1) BS01 ZN 5.6.2.1 GO:0003677 ... Q97ZJ8 N/A
    493438 6k8n:B (2.1) BS01 ZN 5.6.2.1 GO:0003677 ... Q97ZJ8 N/A
    493439 6k8n:C (2.1) BS01 ZN 5.6.2.1 GO:0003677 ... Q97ZJ8 N/A
    493440 6k8n:D (2.1) BS01 ZN 5.6.2.1 GO:0003677 ... Q97ZJ8 N/A
    493441 6k8o:A (2.5) BS01 dna 5.6.2.1 GO:0003677 ... Q97ZJ8 N/A
    493442 6k8o:A (2.5) BS02 ZN 5.6.2.1 GO:0003677 ... Q97ZJ8 N/A
    493443 6k8p:A (1.965) BS01 PO4 2.4.2.3 GO:0003824 ... A0A410UCT3 32493959
    493444 6k8p:A (1.965) BS02 THM 2.4.2.3 GO:0003824 ... A0A410UCT3 32493959
    493445 6k8p:A (1.965) BS03 R1P 2.4.2.3 GO:0003824 ... A0A410UCT3 32493959
    493446 6k8p:B (1.965) BS01 THM 2.4.2.3 GO:0003824 ... A0A410UCT3 32493959
    493447 6k8p:B (1.965) BS02 R1P 2.4.2.3 GO:0003824 ... A0A410UCT3 32493959
    493448 6k8p:B (1.965) BS03 TDR 2.4.2.3 GO:0003824 ... A0A410UCT3 32493959
    493449 6k8p:C (1.965) BS01 PO4 2.4.2.3 GO:0003824 ... A0A410UCT3 32493959
    493450 6k8p:C (1.965) BS02 THM 2.4.2.3 GO:0003824 ... A0A410UCT3 32493959
    493451 6k8p:C (1.965) BS03 R1P 2.4.2.3 GO:0003824 ... A0A410UCT3 32493959
    493452 6k8p:D (1.965) BS01 THM 2.4.2.3 GO:0003824 ... A0A410UCT3 32493959
    493453 6k8p:D (1.965) BS02 R1P 2.4.2.3 GO:0003824 ... A0A410UCT3 32493959
    493454 6k8p:D (1.965) BS03 TDR 2.4.2.3 GO:0003824 ... A0A410UCT3 32493959
    493455 6k8t:A (1.9) BS01 COA ? N/A A0A1A7BFR5 31814251
    493456 6k8t:B (1.9) BS01 COA ? N/A A0A1A7BFR5 31814251
    493457 6k8u:A (2.0) BS01 NAP ? N/A A0A1A7BFR5 31814251
    493458 6k8u:B (2.0) BS01 NAP ? N/A A0A1A7BFR5 31814251
    493459 6k8w:A (3.17) BS01 NAP ? N/A A0A1A7BFR5 31814251
    493460 6k8w:B (3.17) BS01 NAP ? N/A A0A1A7BFR5 31814251
    493461 6k8z:A (1.9) BS01 ADP 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493462 6k8z:B (1.9) BS01 ADP 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493463 6k8z:B (1.9) BS02 CA 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493464 6k8z:B (1.9) BS03 CA 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493465 6k90:A (1.9) BS01 PXM 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493466 6k90:A (1.9) BS02 ADP 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493467 6k90:A (1.9) BS03 CA 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493468 6k90:A (1.9) BS04 CA 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493469 6k90:B (1.9) BS01 ADP 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493470 6k90:B (1.9) BS02 PXM 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493471 6k90:B (1.9) BS03 CA 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493472 6k91:A (2.0) BS01 ADP 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493473 6k91:A (2.0) BS02 UEG 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493474 6k91:A (2.0) BS03 CA 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493475 6k91:A (2.0) BS04 CA 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493476 6k91:B (2.0) BS01 ADP 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493477 6k91:B (2.0) BS02 UEG 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493478 6k91:B (2.0) BS03 CA 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493479 6k92:A (1.85) BS01 ADP 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493480 6k92:A (1.85) BS02 GT0 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493481 6k92:A (1.85) BS03 CA 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493482 6k92:B (1.85) BS01 ADP 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493483 6k92:B (1.85) BS02 GT0 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493484 6k92:B (1.85) BS03 CA 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493485 6k92:B (1.85) BS04 CA 2.7.1.35 GO:0000166 ... A0A3S7X3C0 32105687
    493486 6k96:A (2.5) BS01 NAD ? GO:0000166 ... A0A1B4ZC85 31825604
    493487 6k96:B (2.5) BS01 NAD ? GO:0000166 ... A0A1B4ZC85 31825604
    493488 6k9a:A (2.3) BS01 CA 2.7.7.-
    2.7.7.7
    3.6.4.12
    N/A M5AAG8 N/A
    493489 6k9a:A (2.3) BS02 CA 2.7.7.-
    2.7.7.7
    3.6.4.12
    N/A M5AAG8 N/A
    493490 6k9a:A (2.3) BS03 DGT 2.7.7.-
    2.7.7.7
    3.6.4.12
    N/A M5AAG8 N/A
    493491 6k9g:A (2.8) BS01 D3R ? GO:0003677 ... P55055 32248003
    493492 6k9g:B (2.8) BS01 D3R ? GO:0003677 ... P55055 32248003
    493493 6k9g:C (2.8) BS01 D3R ? GO:0003677 ... P55055 32248003
    493494 6k9g:D (2.8) BS01 D3R ? GO:0003677 ... P55055 32248003
    493495 6k9h:A (2.5) BS01 D40 ? GO:0003677 ... P55055 32248003 MOAD: Ki=600nM
    493496 6k9h:B (2.5) BS01 D40 ? GO:0003677 ... P55055 32248003 MOAD: Ki=600nM
    493497 6k9i:A (1.8) BS01 HEC ? GO:0005515 ... P00004 N/A
    493498 6k9j:A (0.98) BS01 HEC ? GO:0005515 ... P00004 N/A
    493499 6k9m:A (2.9) BS01 D43 ? GO:0003677 ... P55055 32961480
    493500 6k9m:B (2.9) BS01 D43 ? GO:0003677 ... P55055 32961480
    493501 6k9m:C (2.9) BS01 D43 ? GO:0003677 ... P55055 32961480
    493502 6k9m:D (2.9) BS01 D43 ? GO:0003677 ... P55055 32961480
    493503 6k9r:A (1.3) BS01 XYP 3.2.1.8 GO:0004553 ... P36217 33128114
    493504 6k9r:A (1.3) BS02 XYP 3.2.1.8 GO:0004553 ... P36217 33128114
    493505 6k9s:A (1.55) BS01 RUR 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    493506 6k9s:A (1.55) BS02 WAA 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    493507 6k9s:B (1.55) BS01 RUR 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    493508 6k9s:B (1.55) BS02 WAA 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    493509 6k9t:A (1.459) BS01 CEF 3.5.2.6 GO:0000166 ... Q9XB24 31451494
    493510 6k9u:A (2.35) BS01 ZN 3.1.4.17 GO:0004114 ... Q9QYJ6 31235264
    493511 6k9u:A (2.35) BS02 MG 3.1.4.17 GO:0004114 ... Q9QYJ6 31235264
    493512 6k9u:A (2.35) BS03 D4L 3.1.4.17 GO:0004114 ... Q9QYJ6 31235264
    493513 6k9v:A (2.543) BS01 GTP 3.6.5.- GO:0000226 ... P81947 31369682
    493514 6k9v:A (2.543) BS02 MG 3.6.5.- GO:0000226 ... P81947 31369682
    493515 6k9v:B (2.543) BS01 GDP ? GO:0000226 ... Q6B856 31369682
    493516 6k9v:B (2.543) BS02 D3L ? GO:0000226 ... Q6B856 31369682 BindingDB: IC50=530nM
    493517 6k9v:C (2.543) BS01 GTP 3.6.5.- GO:0000226 ... P81947 31369682
    493518 6k9v:C (2.543) BS02 CA 3.6.5.- GO:0000226 ... P81947 31369682
    493519 6k9v:D (2.543) BS01 GTP ? GO:0000226 ... Q6B856 31369682
    493520 6k9v:D (2.543) BS02 D3L ? GO:0000226 ... Q6B856 31369682 BindingDB: IC50=530nM
    493521 6k9v:F (2.543) BS01 ACP N/A GO:0036211 ... N/A 31369682
    493522 6k9x:A (1.2) BS01 XYP 3.2.1.8 GO:0004553 ... P36217 24419374
    493523 6k9x:A (1.2) BS02 XYP 3.2.1.8 GO:0004553 ... P36217 24419374
    493524 6k9x:A (1.2) BS03 XYP 3.2.1.8 GO:0004553 ... P36217 24419374
    493525 6k9z:A (1.78) BS01 ZN ? GO:0000166 ... Q8ZXN7 31693208
    493526 6k9z:A (1.78) BS02 ZN ? GO:0000166 ... Q8ZXN7 31693208
    493527 6k9z:A (1.78) BS03 FE ? GO:0000166 ... Q8ZXN7 31693208
    493528 6k9z:A (1.78) BS04 UDP ? GO:0000166 ... Q8ZXN7 31693208
    493529 6k9z:B (1.78) BS01 UDP ? GO:0000166 ... Q8ZXN7 31693208
    493530 6k9z:B (1.78) BS02 ZN ? GO:0000166 ... Q8ZXN7 31693208
    493531 6k9z:B (1.78) BS03 ZN ? GO:0000166 ... Q8ZXN7 31693208
    493532 6k9z:B (1.78) BS04 FE ? GO:0000166 ... Q8ZXN7 31693208
    493533 6ka2:A (2.35) BS01 D4R 4.2.99.24 GO:0006952 ... A0A2U9GGW3 32703404
    493534 6ka2:B (2.35) BS01 D4R 4.2.99.24 GO:0006952 ... A0A2U9GGW3 32703404
    493535 6ka2:C (2.35) BS01 D4R 4.2.99.24 GO:0006952 ... A0A2U9GGW3 32703404
    493536 6ka5:A (1.59) BS01 1S7 3.5.2.6 GO:0000166 ... Q9XB24 31451494
    493537 6ka6:A (1.891) BS01 D4O 6.1.1.6 GO:0000049 ... W7JP72 32195573 MOAD: ic50=221nM
    493538 6ka6:A (1.891) BS02 LYS 6.1.1.6 GO:0000049 ... W7JP72 32195573
    493539 6ka6:B (1.891) BS01 D4O 6.1.1.6 GO:0000049 ... W7JP72 32195573 MOAD: ic50=221nM
    493540 6ka6:B (1.891) BS02 LYS 6.1.1.6 GO:0000049 ... W7JP72 32195573
    493541 6ka6:C (1.891) BS01 D4O 6.1.1.6 GO:0000049 ... W7JP72 32195573 MOAD: ic50=221nM
    493542 6ka6:C (1.891) BS02 LYS 6.1.1.6 GO:0000049 ... W7JP72 32195573
    493543 6ka6:D (1.891) BS01 D4O 6.1.1.6 GO:0000049 ... W7JP72 32195573 MOAD: ic50=221nM
    493544 6ka6:D (1.891) BS02 LYS 6.1.1.6 GO:0000049 ... W7JP72 32195573
    493545 6ka7:D (3.0) BS01 BMA ? N/A P0DOX5 N/A
    493546 6ka9:A (1.4) BS01 HEM ? GO:0004601 ... P69905 32071219
    493547 6ka9:B (1.4) BS01 HNI ? GO:0004601 ... P68871 32071219
    493548 6ka9:C (1.4) BS01 HEM ? GO:0004601 ... P69905 32071219
    493549 6ka9:D (1.4) BS01 HNI ? GO:0004601 ... P68871 32071219
    493550 6ka9:E (1.4) BS01 HEM ? GO:0004601 ... P69905 32071219
    493551 6ka9:F (1.4) BS01 HNI ? GO:0004601 ... P68871 32071219
    493552 6ka9:F (1.4) BS02 2FU ? GO:0004601 ... P68871 32071219
    493553 6ka9:G (1.4) BS01 HEM ? GO:0004601 ... P69905 32071219
    493554 6ka9:H (1.4) BS01 HNI ? GO:0004601 ... P68871 32071219
    493555 6kab:A (2.892) BS01 D4U 6.1.1.6 GO:0000049 ... W7JP72 32195573
    493556 6kab:A (2.892) BS02 LYS 6.1.1.6 GO:0000049 ... W7JP72 32195573
    493557 6kab:B (2.892) BS01 D4U 6.1.1.6 GO:0000049 ... W7JP72 32195573
    493558 6kab:B (2.892) BS02 LYS 6.1.1.6 GO:0000049 ... W7JP72 32195573
    493559 6kab:C (2.892) BS01 D4U 6.1.1.6 GO:0000049 ... W7JP72 32195573
    493560 6kab:C (2.892) BS02 LYS 6.1.1.6 GO:0000049 ... W7JP72 32195573
    493561 6kab:D (2.892) BS01 D4U 6.1.1.6 GO:0000049 ... W7JP72 32195573
    493562 6kab:D (2.892) BS02 LYS 6.1.1.6 GO:0000049 ... W7JP72 32195573
    493563 6kac:A (2.7) BS01 OEX 1.10.3.9 GO:0005506 ... P07753 31768031
    493564 6kac:A (2.7) BS02 FE2 1.10.3.9 GO:0005506 ... P07753 31768031
    493565 6kac:A (2.7) BS03 CLA 1.10.3.9 GO:0005506 ... P07753 31768031
    493566 6kac:A (2.7) BS04 CLA 1.10.3.9 GO:0005506 ... P07753 31768031
    493567 6kac:A (2.7) BS05 CLA 1.10.3.9 GO:0005506 ... P07753 31768031
    493568 6kac:A (2.7) BS06 PHO 1.10.3.9 GO:0005506 ... P07753 31768031
    493569 6kac:A (2.7) BS07 PHO 1.10.3.9 GO:0005506 ... P07753 31768031
    493570 6kac:A (2.7) BS08 CLA 1.10.3.9 GO:0005506 ... P07753 31768031
    493571 6kac:A (2.7) BS09 CLA 1.10.3.9 GO:0005506 ... P07753 31768031
    493572 6kac:A (2.7) BS10 BCT 1.10.3.9 GO:0005506 ... P07753 31768031
    493573 6kac:A (2.7) BS11 CLA 1.10.3.9 GO:0005506 ... P07753 31768031
    493574 6kac:B (2.7) BS01 peptide ? GO:0009507 ... P37255 31768031
    493575 6kac:B (2.7) BS02 CLA ? GO:0009507 ... P37255 31768031
    493576 6kac:B (2.7) BS03 CLA ? GO:0009507 ... P37255 31768031
    493577 6kac:B (2.7) BS04 CLA ? GO:0009507 ... P37255 31768031
    493578 6kac:B (2.7) BS05 CLA ? GO:0009507 ... P37255 31768031
    493579 6kac:B (2.7) BS06 CLA ? GO:0009507 ... P37255 31768031
    493580 6kac:B (2.7) BS07 CLA ? GO:0009507 ... P37255 31768031
    493581 6kac:B (2.7) BS08 CLA ? GO:0009507 ... P37255 31768031
    493582 6kac:B (2.7) BS09 CLA ? GO:0009507 ... P37255 31768031
    493583 6kac:B (2.7) BS10 CLA ? GO:0009507 ... P37255 31768031
    493584 6kac:B (2.7) BS11 CLA ? GO:0009507 ... P37255 31768031
    493585 6kac:B (2.7) BS12 CLA ? GO:0009507 ... P37255 31768031
    493586 6kac:B (2.7) BS13 CLA ? GO:0009507 ... P37255 31768031
    493587 6kac:B (2.7) BS14 CLA ? GO:0009507 ... P37255 31768031
    493588 6kac:B (2.7) BS15 CLA ? GO:0009507 ... P37255 31768031
    493589 6kac:B (2.7) BS16 CLA ? GO:0009507 ... P37255 31768031
    493590 6kac:B (2.7) BS17 CLA ? GO:0009507 ... P37255 31768031
    493591 6kac:B (2.7) BS18 CLA ? GO:0009507 ... P37255 31768031
    493592 6kac:C (2.7) BS01 peptide ? GO:0005737 ... P10898 31768031
    493593 6kac:C (2.7) BS02 OEX ? GO:0005737 ... P10898 31768031
    493594 6kac:C (2.7) BS03 CLA ? GO:0005737 ... P10898 31768031
    493595 6kac:C (2.7) BS04 CLA ? GO:0005737 ... P10898 31768031
    493596 6kac:C (2.7) BS05 CLA ? GO:0005737 ... P10898 31768031
    493597 6kac:C (2.7) BS06 CLA ? GO:0005737 ... P10898 31768031
    493598 6kac:C (2.7) BS07 CLA ? GO:0005737 ... P10898 31768031
    493599 6kac:C (2.7) BS08 CLA ? GO:0005737 ... P10898 31768031
    493600 6kac:C (2.7) BS09 CLA ? GO:0005737 ... P10898 31768031

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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