SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    49201 1s3t:C (2.1) BS01 BO3 3.5.1.5 GO:0005737 ... P41020 15038715
    49202 1s3u:A (2.5) BS01 TQD 1.5.1.3 GO:0000900 ... P00374 15039552
    49203 1s3v:A (1.8) BS01 TQD 1.5.1.3 GO:0000900 ... P00374 15039552
    49204 1s3w:A (1.9) BS01 NAP 1.5.1.3 GO:0000900 ... P00374 15039552
    49205 1s3w:A (1.9) BS02 TQT 1.5.1.3 GO:0000900 ... P00374 15039552
    49206 1s3x:A (1.84) BS01 PO4 ? GO:0005524 ... P0DMV8 9083109
    49207 1s3x:A (1.84) BS02 CA ? GO:0005524 ... P0DMV8 9083109
    49208 1s3x:A (1.84) BS03 ADP ? GO:0005524 ... P0DMV8 9083109
    49209 1s3y:A (2.25) BS01 NAP 1.5.1.3 GO:0003729 ... P16184 15039552
    49210 1s3y:A (2.25) BS02 TQT 1.5.1.3 GO:0003729 ... P16184 15039552 MOAD: ic50=210nM
    49211 1s3z:A (2.0) BS01 COA 2.3.1.82 GO:0006084 ... Q9R381 15123251
    49212 1s3z:A (2.0) BS02 RIO 2.3.1.82 GO:0006084 ... Q9R381 15123251
    49213 1s3z:A (2.0) BS03 RIO 2.3.1.82 GO:0006084 ... Q9R381 15123251
    49214 1s3z:B (2.0) BS01 RIO 2.3.1.82 GO:0006084 ... Q9R381 15123251
    49215 1s3z:B (2.0) BS02 COA 2.3.1.82 GO:0006084 ... Q9R381 15123251
    49216 1s3z:B (2.0) BS03 RIO 2.3.1.82 GO:0006084 ... Q9R381 15123251
    49217 1s40:A (-1.00) BS01 dna ? GO:0000723 ... P32797 15066429
    49218 1s46:A (2.2) BS01 BGC 2.4.1.4 GO:0005576 ... Q9ZEU2 15023061
    49219 1s49:A (3.0) BS01 GTP 2.7.7.48
    3.4.21.113
    3.4.22.-
    3.6.1.15
    3.6.4.13
    4.6.1.19
    GO:0003723 ... P19711 15070734
    49220 1s4b:P (2.0) BS01 ZN 3.4.24.15 GO:0000209 ... P52888 14998993
    49221 1s4c:A (2.2) BS01 CU ? GO:0005737 ... P44583 16077096
    49222 1s4c:B (2.2) BS01 CU ? GO:0005737 ... P44583 16077096
    49223 1s4c:C (2.2) BS01 CU ? GO:0005737 ... P44583 16077096
    49224 1s4c:D (2.2) BS01 CU ? GO:0005737 ... P44583 16077096
    49225 1s4d:A (2.7) BS01 SAH 2.1.1.107 GO:0004851 ... P21631 15522295
    49226 1s4d:B (2.7) BS01 SAH 2.1.1.107 GO:0004851 ... P21631 15522295
    49227 1s4d:D (2.7) BS01 SAH 2.1.1.107 GO:0004851 ... P21631 15522295
    49228 1s4d:E (2.7) BS01 SAH 2.1.1.107 GO:0004851 ... P21631 15522295
    49229 1s4d:F (2.7) BS01 SAH 2.1.1.107 GO:0004851 ... P21631 15522295
    49230 1s4d:G (2.7) BS01 SAH 2.1.1.107 GO:0004851 ... P21631 15522295
    49231 1s4d:H (2.7) BS01 SAH 2.1.1.107 GO:0004851 ... P21631 15522295
    49232 1s4d:I (2.7) BS01 SAH 2.1.1.107 GO:0004851 ... P21631 15522295
    49233 1s4d:J (2.7) BS01 SAH 2.1.1.107 GO:0004851 ... P21631 15522295
    49234 1s4d:K (2.7) BS01 SAH 2.1.1.107 GO:0004851 ... P21631 15522295
    49235 1s4d:L (2.7) BS01 SAH 2.1.1.107 GO:0004851 ... P21631 15522295
    49236 1s4d:M (2.7) BS01 SAH 2.1.1.107 GO:0004851 ... P21631 15522295
    49237 1s4e:A (2.9) BS01 GLA 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49238 1s4e:A (2.9) BS02 ADP 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49239 1s4e:B (2.9) BS01 GLA 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49240 1s4e:B (2.9) BS02 ADP 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49241 1s4e:C (2.9) BS01 GLA 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49242 1s4e:C (2.9) BS02 ADP 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49243 1s4e:D (2.9) BS01 GLA 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49244 1s4e:D (2.9) BS02 ADP 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49245 1s4e:E (2.9) BS01 GLA 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49246 1s4e:E (2.9) BS02 ADP 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49247 1s4e:F (2.9) BS01 GLA 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49248 1s4e:F (2.9) BS02 ADP 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49249 1s4e:G (2.9) BS01 GLA 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49250 1s4e:G (2.9) BS02 ADP 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49251 1s4e:H (2.9) BS01 GLA 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49252 1s4e:H (2.9) BS02 ADP 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49253 1s4e:I (2.9) BS01 GLA 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49254 1s4e:I (2.9) BS02 ADP 2.7.1.6 GO:0000287 ... Q9HHB6 15003454
    49255 1s4i:A (1.8) BS01 ZN 1.15.1.1 GO:0004784 ... O31851 15897454
    49256 1s4i:A (1.8) BS02 ZN 1.15.1.1 GO:0004784 ... O31851 15897454
    49257 1s4i:B (1.8) BS01 ZN 1.15.1.1 GO:0004784 ... O31851 15897454
    49258 1s4i:B (1.8) BS02 ZN 1.15.1.1 GO:0004784 ... O31851 15897454
    49259 1s4i:C (1.8) BS01 ZN 1.15.1.1 GO:0004784 ... O31851 15897454
    49260 1s4i:C (1.8) BS02 ZN 1.15.1.1 GO:0004784 ... O31851 15897454
    49261 1s4i:D (1.8) BS01 ZN 1.15.1.1 GO:0004784 ... O31851 15897454
    49262 1s4i:D (1.8) BS02 ZN 1.15.1.1 GO:0004784 ... O31851 15897454
    49263 1s4m:A (2.1) BS01 LUM 2.7.1.26
    2.7.7.2
    GO:0003919 ... Q9WZW1 15468322
    49264 1s4m:B (2.1) BS01 LUM 2.7.1.26
    2.7.7.2
    GO:0003919 ... Q9WZW1 15468322
    49265 1s4o:A (2.01) BS01 MN 2.4.1.- GO:0000030 ... P27809 14752117
    49266 1s4o:A (2.01) BS02 GDP 2.4.1.- GO:0000030 ... P27809 14752117
    49267 1s4o:B (2.01) BS01 MN 2.4.1.- GO:0000030 ... P27809 14752117
    49268 1s4o:B (2.01) BS02 GDP 2.4.1.- GO:0000030 ... P27809 14752117
    49269 1s4p:A (2.01) BS01 MMA 2.4.1.- GO:0000030 ... P27809 14752117
    49270 1s4p:A (2.01) BS02 MN 2.4.1.- GO:0000030 ... P27809 14752117
    49271 1s4p:A (2.01) BS03 GDP 2.4.1.- GO:0000030 ... P27809 14752117
    49272 1s4p:B (2.01) BS01 MMA 2.4.1.- GO:0000030 ... P27809 14752117
    49273 1s4p:B (2.01) BS02 MN 2.4.1.- GO:0000030 ... P27809 14752117
    49274 1s4p:B (2.01) BS03 GDP 2.4.1.- GO:0000030 ... P27809 14752117
    49275 1s4v:A (2.0) BS01 peptide 3.4.22.- GO:0006508 ... O65039 15037072
    49276 1s4v:A (2.0) BS02 peptide 3.4.22.- GO:0006508 ... O65039 15037072
    49277 1s4v:B (2.0) BS01 peptide 3.4.22.- GO:0006508 ... O65039 15037072
    49278 1s50:A (1.65) BS01 GLU ? GO:0015276 ... P42260 15721240 MOAD: Ki=1.4uM
    49279 1s51:A (2.0) BS01 RET ? GO:0005216 ... P02945 14982414
    49280 1s51:B (2.0) BS01 RET ? GO:0005216 ... P02945 14982414
    49281 1s52:A (2.3) BS01 RET ? GO:0005216 ... P02945 14982414
    49282 1s52:B (2.3) BS01 RET ? GO:0005216 ... P02945 14982414
    49283 1s53:A (2.0) BS01 RET ? GO:0005216 ... P02945 14982414
    49284 1s53:B (2.0) BS01 RET ? GO:0005216 ... P02945 14982414
    49285 1s54:A (2.2) BS01 RET ? GO:0005216 ... P02945 14982414
    49286 1s54:B (2.2) BS01 RET ? GO:0005216 ... P02945 14982414
    49287 1s56:A (2.43) BS01 HEC ? GO:0005515 ... P9WN25 15016811
    49288 1s56:A (2.43) BS02 XE ? GO:0005515 ... P9WN25 15016811
    49289 1s56:A (2.43) BS03 XE ? GO:0005515 ... P9WN25 15016811
    49290 1s56:A (2.43) BS04 XE ? GO:0005515 ... P9WN25 15016811
    49291 1s56:B (2.43) BS01 HEM ? GO:0005515 ... P9WN25 15016811
    49292 1s56:B (2.43) BS02 XE ? GO:0005515 ... P9WN25 15016811
    49293 1s56:B (2.43) BS03 XE ? GO:0005515 ... P9WN25 15016811
    49294 1s59:A (2.6) BS01 DGI 2.7.4.6 GO:0004550 ... O64903 15465053
    49295 1s59:C (2.6) BS01 DGT 2.7.4.6 GO:0004550 ... O64903 15465053
    49296 1s5d:D (1.75) BS01 GAL ? GO:0005515 ... P01556 15049684
    49297 1s5d:E (1.75) BS01 GAL ? GO:0005515 ... P01556 15049684
    49298 1s5d:F (1.75) BS01 GAL ? GO:0005515 ... P01556 15049684
    49299 1s5d:G (1.75) BS01 GAL ? GO:0005515 ... P01556 15049684
    49300 1s5d:H (1.75) BS01 GAL ? GO:0005515 ... P01556 15049684
    49301 1s5e:D (1.9) BS01 GAL ? GO:0005515 ... P01556 15049684
    49302 1s5e:J (1.9) BS01 GAL ? GO:0005515 ... P01556 15049684
    49303 1s5f:D (2.6) BS01 GAL ? GO:0005515 ... P01556 15049684
    49304 1s5f:E (2.6) BS01 GAL ? GO:0005515 ... P01556 15049684
    49305 1s5f:F (2.6) BS01 GAL ? GO:0005515 ... P01556 15049684
    49306 1s5f:G (2.6) BS01 GAL ? GO:0005515 ... P01556 15049684
    49307 1s5f:H (2.6) BS01 GAL ? GO:0005515 ... P01556 15049684
    49308 1s5g:A (3.1) BS01 ADP ? GO:0003774 ... P24733 15184651
    49309 1s5g:Y (3.1) BS01 MG ? GO:0005509 ... P13543 15184651
    49310 1s5g:Z (3.1) BS01 CA ? GO:0005509 ... P07291 15184651
    49311 1s5j:A (2.4) BS01 MG 2.7.7.7 GO:0000166 ... P26811 15530364
    49312 1s5k:A (2.4) BS01 COA 2.3.1.82 GO:0006084 ... Q9R381 15123251
    49313 1s5k:B (2.4) BS01 COA 2.3.1.82 GO:0006084 ... Q9R381 15123251
    49314 1s5l:A (3.5) BS01 FE 1.10.3.9 GO:0005506 ... P0A444 14764885
    49315 1s5l:A (3.5) BS02 BCT 1.10.3.9 GO:0005506 ... P0A444 14764885
    49316 1s5l:A (3.5) BS03 OEC 1.10.3.9 GO:0005506 ... P0A444 14764885
    49317 1s5l:A (3.5) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 14764885
    49318 1s5l:A (3.5) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 14764885
    49319 1s5l:A (3.5) BS06 CLA 1.10.3.9 GO:0005506 ... P0A444 14764885
    49320 1s5l:A (3.5) BS07 PHO 1.10.3.9 GO:0005506 ... P0A444 14764885
    49321 1s5l:A (3.5) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 14764885
    49322 1s5l:A (3.5) BS09 CLA 1.10.3.9 GO:0005506 ... P0A444 14764885
    49323 1s5l:A (3.5) BS10 BCT 1.10.3.9 GO:0005506 ... P0A444 14764885
    49324 1s5l:A (3.5) BS11 PHO 1.10.3.9 GO:0005506 ... P0A444 14764885
    49325 1s5l:B (3.5) BS01 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49326 1s5l:B (3.5) BS02 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49327 1s5l:B (3.5) BS03 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49328 1s5l:B (3.5) BS04 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49329 1s5l:B (3.5) BS05 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49330 1s5l:B (3.5) BS06 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49331 1s5l:B (3.5) BS07 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49332 1s5l:B (3.5) BS08 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49333 1s5l:B (3.5) BS09 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49334 1s5l:B (3.5) BS10 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49335 1s5l:B (3.5) BS11 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49336 1s5l:B (3.5) BS12 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49337 1s5l:B (3.5) BS13 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49338 1s5l:B (3.5) BS14 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49339 1s5l:B (3.5) BS15 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49340 1s5l:B (3.5) BS16 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49341 1s5l:C (3.5) BS01 CLA ? GO:0005737 ... Q8DIF8 14764885
    49342 1s5l:C (3.5) BS02 CLA ? GO:0005737 ... Q8DIF8 14764885
    49343 1s5l:C (3.5) BS03 CLA ? GO:0005737 ... Q8DIF8 14764885
    49344 1s5l:C (3.5) BS04 CLA ? GO:0005737 ... Q8DIF8 14764885
    49345 1s5l:C (3.5) BS05 CLA ? GO:0005737 ... Q8DIF8 14764885
    49346 1s5l:C (3.5) BS06 CLA ? GO:0005737 ... Q8DIF8 14764885
    49347 1s5l:C (3.5) BS07 CLA ? GO:0005737 ... Q8DIF8 14764885
    49348 1s5l:C (3.5) BS08 CLA ? GO:0005737 ... Q8DIF8 14764885
    49349 1s5l:C (3.5) BS09 CLA ? GO:0005737 ... Q8DIF8 14764885
    49350 1s5l:C (3.5) BS10 CLA ? GO:0005737 ... Q8DIF8 14764885
    49351 1s5l:C (3.5) BS11 CLA ? GO:0005737 ... Q8DIF8 14764885
    49352 1s5l:C (3.5) BS12 CLA ? GO:0005737 ... Q8DIF8 14764885
    49353 1s5l:C (3.5) BS13 CLA ? GO:0005737 ... Q8DIF8 14764885
    49354 1s5l:C (3.5) BS14 CLA ? GO:0005737 ... Q8DIF8 14764885
    49355 1s5l:D (3.5) BS01 FE 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49356 1s5l:D (3.5) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49357 1s5l:D (3.5) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49358 1s5l:D (3.5) BS04 PHO 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49359 1s5l:D (3.5) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49360 1s5l:D (3.5) BS06 BCT 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49361 1s5l:D (3.5) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49362 1s5l:D (3.5) BS08 PHO 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49363 1s5l:D (3.5) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49364 1s5l:E (3.5) BS01 HEC ? GO:0005506 ... Q8DIP0 14764885
    49365 1s5l:F (3.5) BS01 HEC ? GO:0005506 ... Q8DIN9 14764885
    49366 1s5l:H (3.5) BS01 CLA ? GO:0009523 ... Q8DJ43 14764885
    49367 1s5l:H (3.5) BS02 CLA ? GO:0009523 ... Q8DJ43 14764885
    49368 1s5l:H (3.5) BS03 CLA ? GO:0009523 ... Q8DJ43 14764885
    49369 1s5l:H (3.5) BS04 CLA ? GO:0009523 ... Q8DJ43 14764885
    49370 1s5l:K (3.5) BS01 CLA ? GO:0009523 ... Q9F1K9 14764885
    49371 1s5l:K (3.5) BS02 CLA ? GO:0009523 ... Q9F1K9 14764885
    49372 1s5l:M (3.5) BS01 CLA ? GO:0005737 ... Q8DHA7 14764885
    49373 1s5l:V (3.5) BS01 HEC ? GO:0005506 ... P0A386 14764885
    49374 1s5l:a (3.5) BS01 FE 1.10.3.9 GO:0005506 ... P0A444 14764885
    49375 1s5l:a (3.5) BS02 OEC 1.10.3.9 GO:0005506 ... P0A444 14764885
    49376 1s5l:a (3.5) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 14764885
    49377 1s5l:a (3.5) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 14764885
    49378 1s5l:a (3.5) BS05 PHO 1.10.3.9 GO:0005506 ... P0A444 14764885
    49379 1s5l:a (3.5) BS06 CLA 1.10.3.9 GO:0005506 ... P0A444 14764885
    49380 1s5l:a (3.5) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 14764885
    49381 1s5l:a (3.5) BS08 BCT 1.10.3.9 GO:0005506 ... P0A444 14764885
    49382 1s5l:a (3.5) BS09 CLA 1.10.3.9 GO:0005506 ... P0A444 14764885
    49383 1s5l:a (3.5) BS10 CLA 1.10.3.9 GO:0005506 ... P0A444 14764885
    49384 1s5l:a (3.5) BS11 PHO 1.10.3.9 GO:0005506 ... P0A444 14764885
    49385 1s5l:b (3.5) BS01 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49386 1s5l:b (3.5) BS02 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49387 1s5l:b (3.5) BS03 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49388 1s5l:b (3.5) BS04 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49389 1s5l:b (3.5) BS05 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49390 1s5l:b (3.5) BS06 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49391 1s5l:b (3.5) BS07 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49392 1s5l:b (3.5) BS08 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49393 1s5l:b (3.5) BS09 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49394 1s5l:b (3.5) BS10 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49395 1s5l:b (3.5) BS11 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49396 1s5l:b (3.5) BS12 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49397 1s5l:b (3.5) BS13 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49398 1s5l:b (3.5) BS14 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49399 1s5l:b (3.5) BS15 CLA ? GO:0009521 ... Q8DIQ1 14764885
    49400 1s5l:b (3.5) BS16 CLA ? GO:0009521 ... Q8DIQ1 14764885

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).