SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    495201 6ke6:B3 (3.4) BS01 rna ? GO:0000447 ... Q05946 N/A
    495202 6ke6:B6 (3.4) BS01 rna ? GO:0000447 ... Q02354 N/A
    495203 6ke6:B8 (3.4) BS01 rna ? GO:0000292 ... P40362 N/A
    495204 6ke6:B8 (3.4) BS02 rna ? GO:0000292 ... P40362 N/A
    495205 6ke6:BE (3.4) BS01 rna ? GO:0003674 ... Q06078 N/A
    495206 6ke6:BE (3.4) BS02 rna ? GO:0003674 ... Q06078 N/A
    495207 6ke6:RA (3.4) BS01 rna ? GO:0000462 ... P48234 N/A
    495208 6ke6:RB (3.4) BS01 rna ? GO:0000447 ... P40079 N/A
    495209 6ke6:RC (3.4) BS01 rna ? GO:0000447 ... P25586 N/A
    495210 6ke6:RC (3.4) BS02 rna ? GO:0000447 ... P25586 N/A
    495211 6ke6:RE (3.4) BS01 rna ? GO:0000028 ... P53254 N/A
    495212 6ke6:RF (3.4) BS01 rna ? GO:0000028 ... P25368 N/A
    495213 6ke6:RG (3.4) BS01 rna 2.1.1.260 GO:0000447 ... Q06287 N/A
    495214 6ke6:RH (3.4) BS01 rna 2.1.1.260 GO:0000447 ... Q06287 N/A
    495215 6ke6:RI (3.4) BS01 rna ? GO:0000462 ... P36144 N/A
    495216 6ke6:RI (3.4) BS02 rna ? GO:0000462 ... P36144 N/A
    495217 6ke6:RJ (3.4) BS01 rna ? GO:0000462 ... Q08965 N/A
    495218 6ke6:RJ (3.4) BS02 rna ? GO:0000462 ... Q08965 N/A
    495219 6ke6:RJ (3.4) BS03 rna ? GO:0000462 ... Q08965 N/A
    495220 6ke6:RJ (3.4) BS04 GTP ? GO:0000462 ... Q08965 N/A
    495221 6ke6:RJ (3.4) BS05 MG ? GO:0000462 ... Q08965 N/A
    495222 6ke6:RK (3.4) BS01 rna ? GO:0000447 ... Q08096 N/A
    495223 6ke6:RL (3.4) BS01 rna 2.3.1.- GO:0000049 ... P53914 N/A
    495224 6ke6:RN (3.4) BS01 rna ? GO:0000028 ... Q99207 N/A
    495225 6ke6:RN (3.4) BS02 rna ? GO:0000028 ... Q99207 N/A
    495226 6ke6:RO (3.4) BS01 rna ? GO:0000028 ... Q06512 N/A
    495227 6ke6:RP (3.4) BS01 rna ? GO:0000447 ... P35194 N/A
    495228 6ke6:RQ (3.4) BS01 rna ? GO:0000447 ... Q04500 N/A
    495229 6ke6:RQ (3.4) BS02 rna ? GO:0000447 ... Q04500 N/A
    495230 6ke6:RS (3.4) BS01 rna ? GO:0000447 ... P38333 N/A
    495231 6ke6:RT (3.4) BS01 rna N/A GO:0003723 ... N/A N/A
    495232 6ke6:RV (3.4) BS01 rna ? GO:0000462 ... P40546 N/A
    495233 6ke6:RV (3.4) BS02 rna ? GO:0000462 ... P40546 N/A
    495234 6ke6:RV (3.4) BS03 rna ? GO:0000462 ... P40546 N/A
    495235 6ke6:SC (3.4) BS01 rna ? GO:0000462 ... P33442 N/A
    495236 6ke6:SF (3.4) BS01 rna ? GO:0002181 ... P0CX35 N/A
    495237 6ke6:SG (3.4) BS01 rna ? GO:0000028 ... P26783 N/A
    495238 6ke6:SH (3.4) BS01 rna ? GO:0000462 ... P0CX37 N/A
    495239 6ke6:SI (3.4) BS01 rna ? GO:0002181 ... P26786 N/A
    495240 6ke6:SJ (3.4) BS01 rna ? GO:0000462 ... P0CX39 N/A
    495241 6ke6:SK (3.4) BS01 rna ? GO:0000462 ... O13516 N/A
    495242 6ke6:SM (3.4) BS01 rna ? GO:0000028 ... P0CX47 N/A
    495243 6ke6:SN (3.4) BS01 rna ? GO:0000028 ... P48589 N/A
    495244 6ke6:SO (3.4) BS01 rna ? GO:0000462 ... P05756 N/A
    495245 6ke6:SP (3.4) BS01 rna ? GO:0000028 ... P06367 N/A
    495246 6ke6:SR (3.4) BS01 rna ? GO:0000462 ... P0CX51 N/A
    495247 6ke6:SR (3.4) BS02 rna ? GO:0000462 ... P0CX51 N/A
    495248 6ke6:ST (3.4) BS01 rna ? GO:0000054 ... P0CX55 N/A
    495249 6ke6:SX (3.4) BS01 rna ? GO:0002181 ... Q3E7Y3 N/A
    495250 6ke6:SY (3.4) BS01 rna ? GO:0000462 ... P0CX29 N/A
    495251 6ke6:SZ (3.4) BS01 rna ? GO:0000462 ... P0CX31 N/A
    495252 6ke6:Sc (3.4) BS01 rna ? GO:0000028 ... P35997 N/A
    495253 6ke6:Sc (3.4) BS02 ZN ? GO:0000028 ... P35997 N/A
    495254 6ke6:Sd (3.4) BS01 rna ? GO:0000028 ... Q3E7X9 N/A
    495255 6ke9:A (2.22) BS01 dna ? GO:0000786 ... P68431 N/A
    495256 6ke9:A (2.22) BS02 dna ? GO:0000786 ... P68431 N/A
    495257 6ke9:B (2.22) BS01 dna ? GO:0003677 ... P62805 N/A
    495258 6ke9:B (2.22) BS02 dna ? GO:0003677 ... P62805 N/A
    495259 6ke9:C (2.22) BS01 dna ? GO:0000786 ... P04908 N/A
    495260 6ke9:C (2.22) BS02 dna ? GO:0000786 ... P04908 N/A
    495261 6ke9:D (2.22) BS01 dna ? GO:0000786 ... O60814 N/A
    495262 6ke9:D (2.22) BS02 dna ? GO:0000786 ... O60814 N/A
    495263 6ke9:E (2.22) BS01 dna ? GO:0000786 ... P68431 N/A
    495264 6ke9:E (2.22) BS02 dna ? GO:0000786 ... P68431 N/A
    495265 6ke9:F (2.22) BS01 dna ? GO:0003677 ... P62805 N/A
    495266 6ke9:F (2.22) BS02 dna ? GO:0003677 ... P62805 N/A
    495267 6ke9:G (2.22) BS01 dna ? GO:0000786 ... P04908 N/A
    495268 6ke9:G (2.22) BS02 dna ? GO:0000786 ... P04908 N/A
    495269 6ke9:H (2.22) BS01 dna ? GO:0000786 ... O60814 N/A
    495270 6ke9:H (2.22) BS02 dna ? GO:0000786 ... O60814 N/A
    495271 6keb:C (3.2) BS01 CA ? GO:0001518 ... A8EVM5 31391290
    495272 6keb:D (3.2) BS01 D6C ? GO:0001518 ... A8EVM5 31391290
    495273 6kec:A (1.35) BS01 D9C ? N/A O60885 33802888
    495274 6ked:A (2.54845) BS01 D7R ? N/A O60885 N/A
    495275 6kee:A (2.12155) BS01 D7U ? N/A O60885 N/A BindingDB: IC50=7.4nM
    495276 6kef:A (2.44468) BS01 D7X ? N/A O60885 N/A BindingDB: IC50=15nM
    495277 6keg:A (2.232) BS01 D89 ? N/A O60885 N/A
    495278 6keh:A (1.553) BS01 D6R ? N/A O60885 33802888
    495279 6kei:A (1.451) BS01 D6U ? N/A O60885 33802888
    495280 6kej:A (1.85) BS01 D7F ? N/A O60885 33802888
    495281 6kek:A (1.553) BS01 D7L ? N/A O60885 33802888
    495282 6ken:AA (1.75) BS01 GSH 2.5.1.18 GO:0003824 ... Q7JYX0 32241910
    495283 6ken:BA (1.75) BS01 GSH 2.5.1.18 GO:0003824 ... Q7JYX0 32241910
    495284 6keo:AA (1.7) BS01 EST 2.5.1.18 GO:0003824 ... Q7JYX0 32241910
    495285 6keo:BA (1.7) BS01 EST 2.5.1.18 GO:0003824 ... Q7JYX0 32241910
    495286 6kep:AA (1.55) BS01 GSH 2.5.1.18 GO:0003824 ... Q7JYX0 32241910
    495287 6kep:AA (1.55) BS02 EST 2.5.1.18 GO:0003824 ... Q7JYX0 32241910
    495288 6kep:BA (1.55) BS01 GSH 2.5.1.18 GO:0003824 ... Q7JYX0 32241910
    495289 6kep:BA (1.55) BS02 EST 2.5.1.18 GO:0003824 ... Q7JYX0 32241910
    495290 6ker:AA (1.84) BS01 GSH 2.5.1.18 GO:0003824 ... Q7JYX0 32241910
    495291 6ker:BA (1.84) BS01 GSH 2.5.1.18 GO:0003824 ... Q7JYX0 32241910
    495292 6keu:A (1.99) BS01 D8F ? GO:0016787 ... A0A074MDU6 N/A
    495293 6keu:B (1.99) BS01 D8F ? GO:0016787 ... A0A074MDU6 N/A
    495294 6keu:C (1.99) BS01 D8F ? GO:0016787 ... A0A074MDU6 N/A
    495295 6keu:C (1.99) BS02 6NA ? GO:0016787 ... A0A074MDU6 N/A
    495296 6keu:D (1.99) BS01 D8F ? GO:0016787 ... A0A074MDU6 N/A
    495297 6kev:A (2.50614) BS01 ADP 2.7.1.19 GO:0000166 ... Q31PL2 32102842
    495298 6kev:A (2.50614) BS02 G6P 2.7.1.19 GO:0000166 ... Q31PL2 32102842
    495299 6key:A (1.24) BS01 peptide ? N/A Q99619 33862200
    495300 6kez:A (3.5) BS01 NAD 1.2.1.13 GO:0006006 ... P25856 32102842
    495301 6kez:B (3.5) BS01 NAD 1.2.1.13 GO:0006006 ... P25856 32102842
    495302 6kez:C (3.5) BS01 NAD 1.2.1.13 GO:0006006 ... P25856 32102842
    495303 6kez:D (3.5) BS01 NAD 1.2.1.13 GO:0006006 ... P25856 32102842
    495304 6kez:E (3.5) BS01 NAD 1.2.1.13 GO:0006006 ... P25856 32102842
    495305 6kez:F (3.5) BS01 NAD 1.2.1.13 GO:0006006 ... P25856 32102842
    495306 6kez:G (3.5) BS01 NAD 1.2.1.13 GO:0006006 ... P25856 32102842
    495307 6kez:H (3.5) BS01 NAD 1.2.1.13 GO:0006006 ... P25856 32102842
    495308 6kez:M (3.5) BS01 NAD ? N/A Q9LZP9 32102842
    495309 6kez:N (3.5) BS01 NAD ? N/A Q9LZP9 32102842
    495310 6kez:P (3.5) BS01 NAD ? N/A Q9LZP9 32102842
    495311 6kf1:A (1.996) BS01 NPO ? GO:0016787 ... A0A074MDU6 N/A
    495312 6kf1:A (1.996) BS02 NPO ? GO:0016787 ... A0A074MDU6 N/A
    495313 6kf1:A (1.996) BS03 NPO ? GO:0016787 ... A0A074MDU6 N/A
    495314 6kf1:A (1.996) BS04 6NA ? GO:0016787 ... A0A074MDU6 N/A
    495315 6kf1:B (1.996) BS01 NPO ? GO:0016787 ... A0A074MDU6 N/A
    495316 6kf1:B (1.996) BS02 NPO ? GO:0016787 ... A0A074MDU6 N/A
    495317 6kf1:B (1.996) BS03 6NA ? GO:0016787 ... A0A074MDU6 N/A
    495318 6kf1:C (1.996) BS01 NPO ? GO:0016787 ... A0A074MDU6 N/A
    495319 6kf1:C (1.996) BS02 NPO ? GO:0016787 ... A0A074MDU6 N/A
    495320 6kf1:C (1.996) BS03 NPO ? GO:0016787 ... A0A074MDU6 N/A
    495321 6kf1:C (1.996) BS04 6NA ? GO:0016787 ... A0A074MDU6 N/A
    495322 6kf1:D (1.996) BS01 NPO ? GO:0016787 ... A0A074MDU6 N/A
    495323 6kf1:D (1.996) BS02 NPO ? GO:0016787 ... A0A074MDU6 N/A
    495324 6kf1:D (1.996) BS03 6NA ? GO:0016787 ... A0A074MDU6 N/A
    495325 6kf1:D (1.996) BS04 6NA ? GO:0016787 ... A0A074MDU6 N/A
    495326 6kf3:B (3.9) BS01 ZN 2.7.7.6 GO:0000428 ... Q5JE32 33257704
    495327 6kf4:A (3.97) BS01 MG 2.7.7.6 GO:0000287 ... Q5JE33 33257704
    495328 6kf4:A (3.97) BS02 ZN 2.7.7.6 GO:0000287 ... Q5JE33 33257704
    495329 6kf4:B (3.97) BS01 ZN 2.7.7.6 GO:0000428 ... Q5JE32 33257704
    495330 6kf4:G (3.97) BS01 ZN ? GO:0003677 ... Q5JDD5 33257704
    495331 6kf4:N (3.97) BS01 ZN 2.7.7.6 GO:0000428 ... Q5JJC9 33257704
    495332 6kf5:A (2.09) BS01 D8F ? GO:0016787 ... A0A074MDU6 N/A
    495333 6kf5:A (2.09) BS02 6NA ? GO:0016787 ... A0A074MDU6 N/A
    495334 6kf5:B (2.09) BS01 D8F ? GO:0016787 ... A0A074MDU6 N/A
    495335 6kf5:C (2.09) BS01 D8F ? GO:0016787 ... A0A074MDU6 N/A
    495336 6kf5:D (2.09) BS01 D8F ? GO:0016787 ... A0A074MDU6 N/A
    495337 6kf7:A (1.8) BS01 D8F ? GO:0016787 ... A0A074MDU6 N/A
    495338 6kf7:A (1.8) BS02 6NA ? GO:0016787 ... A0A074MDU6 N/A
    495339 6kf7:B (1.8) BS01 D8F ? GO:0016787 ... A0A074MDU6 N/A
    495340 6kf7:C (1.8) BS01 D8F ? GO:0016787 ... A0A074MDU6 N/A
    495341 6kf7:C (1.8) BS02 6NA ? GO:0016787 ... A0A074MDU6 N/A
    495342 6kf7:D (1.8) BS01 D8F ? GO:0016787 ... A0A074MDU6 N/A
    495343 6kf7:D (1.8) BS02 NPO ? GO:0016787 ... A0A074MDU6 N/A
    495344 6kf9:A (3.79) BS01 dna 2.7.7.6 GO:0000287 ... Q5JE33 33257704
    495345 6kf9:A (3.79) BS02 MG 2.7.7.6 GO:0000287 ... Q5JE33 33257704
    495346 6kf9:B (3.79) BS01 dna 2.7.7.6 GO:0000428 ... Q5JE32 33257704
    495347 6kf9:B (3.79) BS02 ZN 2.7.7.6 GO:0000428 ... Q5JE32 33257704
    495348 6kf9:C (3.79) BS01 dna 2.7.7.6 GO:0000428 ... Q5JE34 33257704
    495349 6kf9:C (3.79) BS02 dna 2.7.7.6 GO:0000428 ... Q5JE34 33257704
    495350 6kf9:G (3.79) BS01 ZN ? GO:0003677 ... Q5JDD5 33257704
    495351 6kfa:A (1.5) BS01 ACT ? GO:0016829 ... A0A0H5BR52 32679618
    495352 6kfb:A (1.55) BS01 SCN ? GO:0016829 ... A0A0H5BR52 32679618
    495353 6kfd:A (1.55) BS01 04E ? GO:0016829 ... A0A0H5BR52 32679618
    495354 6kfm:A (1.7) BS01 PLP 2.3.1.- GO:0008483 ... Q9R9J1 N/A
    495355 6kfm:B (1.7) BS01 PLP 2.3.1.- GO:0008483 ... Q9R9J1 N/A
    495356 6kfq:A (1.84) BS01 MPG ? GO:0005216 ... Q1AUE6 31955569
    495357 6kfq:A (1.84) BS02 MPG ? GO:0005216 ... Q1AUE6 31955569
    495358 6kfq:A (1.84) BS03 MPG ? GO:0005216 ... Q1AUE6 31955569
    495359 6kfq:A (1.84) BS04 MPG ? GO:0005216 ... Q1AUE6 31955569
    495360 6kfq:A (1.84) BS05 MPG ? GO:0005216 ... Q1AUE6 31955569
    495361 6kfq:A (1.84) BS06 RET ? GO:0005216 ... Q1AUE6 31955569
    495362 6kfr:A (3.1) BS01 PLP 2.3.1.- GO:0008483 ... Q9R9J1 N/A
    495363 6kfr:A (3.1) BS02 ARG 2.3.1.- GO:0008483 ... Q9R9J1 N/A
    495364 6kfr:A (3.1) BS03 ARG 2.3.1.- GO:0008483 ... Q9R9J1 N/A
    495365 6kfr:A (3.1) BS04 PLP 2.3.1.- GO:0008483 ... Q9R9J1 N/A
    495366 6kfr:B (3.1) BS01 ARG 2.3.1.- GO:0008483 ... Q9R9J1 N/A
    495367 6kfr:B (3.1) BS02 PLP 2.3.1.- GO:0008483 ... Q9R9J1 N/A
    495368 6kfs:A (1.2) BS01 ZN ? N/A B7FR28 32627740
    495369 6kft:A (2.51) BS01 GTP 3.6.5.- GO:0000054 ... P62826 33883894
    495370 6kft:A (2.51) BS02 MG 3.6.5.- GO:0000054 ... P62826 33883894
    495371 6kft:C (2.51) BS01 peptide ? GO:0000055 ... P30822 33883894
    495372 6kfu:A (2.2) BS01 PLP 2.3.1.- GO:0008483 ... Q9R9J1 N/A
    495373 6kfw:A (2.0) BS01 HEM ? GO:0004497 ... A0A290YXM6 33884733
    495374 6kfw:A (2.0) BS02 D8L ? GO:0004497 ... A0A290YXM6 33884733
    495375 6kfz:A (1.96) BS01 C6P 2.8.1.7 GO:0005515 ... O32164 31587510
    495376 6kg0:A (2.78) BS01 C6P 2.8.1.7 GO:0005515 ... O25008 31587510
    495377 6kg1:A (2.7) BS01 PDA 2.8.1.7 GO:0005515 ... O25008 31587510
    495378 6kg2:A (2.25) BS01 D8C 1.5.1.15
    3.5.4.9
    GO:0003824 ... P13995 31638799 MOAD: ic50=0.048uM
    BindingDB: IC50=48nM
    495379 6kg2:A (2.25) BS02 NAD 1.5.1.15
    3.5.4.9
    GO:0003824 ... P13995 31638799
    495380 6kg2:A (2.25) BS03 PO4 1.5.1.15
    3.5.4.9
    GO:0003824 ... P13995 31638799
    495381 6kg2:A (2.25) BS04 PO4 1.5.1.15
    3.5.4.9
    GO:0003824 ... P13995 31638799
    495382 6kg2:B (2.25) BS01 PO4 1.5.1.15
    3.5.4.9
    GO:0003824 ... P13995 31638799
    495383 6kg2:B (2.25) BS02 D8C 1.5.1.15
    3.5.4.9
    GO:0003824 ... P13995 31638799 MOAD: ic50=0.048uM
    BindingDB: IC50=48nM
    495384 6kg2:B (2.25) BS03 NAD 1.5.1.15
    3.5.4.9
    GO:0003824 ... P13995 31638799
    495385 6kg2:B (2.25) BS04 PO4 1.5.1.15
    3.5.4.9
    GO:0003824 ... P13995 31638799
    495386 6kg9:A (-1.00) BS01 CA ? GO:0000272 ... Q97KK2 33097546
    495387 6kg9:A (-1.00) BS02 CA ? GO:0000272 ... Q97KK2 33097546
    495388 6kgb:A (1.3) BS01 CA ? N/A P02766 32852783
    495389 6kgc:B (1.6) BS01 CA ? GO:0000272 ... Q97KK2 33097546
    495390 6kgc:B (1.6) BS02 CA ? GO:0000272 ... Q97KK2 33097546
    495391 6kgd:B (1.65) BS01 CA ? GO:0000272 ... Q97KK2 33097546
    495392 6kgd:B (1.65) BS02 CA ? GO:0000272 ... Q97KK2 33097546
    495393 6kge:B (2.0) BS01 CA ? GO:0000272 ... Q97KK2 33097546
    495394 6kge:B (2.0) BS02 CA ? GO:0000272 ... Q97KK2 33097546
    495395 6kge:D (2.0) BS01 CA ? GO:0000272 ... Q97KK2 33097546
    495396 6kge:D (2.0) BS02 CA ? GO:0000272 ... Q97KK2 33097546
    495397 6kgf:B (2.3) BS01 CA ? GO:0000272 ... Q97KK2 33097546
    495398 6kgf:B (2.3) BS02 CA ? GO:0000272 ... Q97KK2 33097546
    495399 6kgf:D (2.3) BS01 CA ? GO:0000272 ... Q97KK2 33097546
    495400 6kgf:D (2.3) BS02 CA ? GO:0000272 ... Q97KK2 33097546

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).