SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    49401 1s5l:c (3.5) BS01 CLA ? GO:0005737 ... Q8DIF8 14764885
    49402 1s5l:c (3.5) BS02 CLA ? GO:0005737 ... Q8DIF8 14764885
    49403 1s5l:c (3.5) BS03 CLA ? GO:0005737 ... Q8DIF8 14764885
    49404 1s5l:c (3.5) BS04 CLA ? GO:0005737 ... Q8DIF8 14764885
    49405 1s5l:c (3.5) BS05 CLA ? GO:0005737 ... Q8DIF8 14764885
    49406 1s5l:c (3.5) BS06 CLA ? GO:0005737 ... Q8DIF8 14764885
    49407 1s5l:c (3.5) BS07 CLA ? GO:0005737 ... Q8DIF8 14764885
    49408 1s5l:c (3.5) BS08 CLA ? GO:0005737 ... Q8DIF8 14764885
    49409 1s5l:c (3.5) BS09 CLA ? GO:0005737 ... Q8DIF8 14764885
    49410 1s5l:c (3.5) BS10 CLA ? GO:0005737 ... Q8DIF8 14764885
    49411 1s5l:c (3.5) BS11 CLA ? GO:0005737 ... Q8DIF8 14764885
    49412 1s5l:c (3.5) BS12 CLA ? GO:0005737 ... Q8DIF8 14764885
    49413 1s5l:c (3.5) BS13 CLA ? GO:0005737 ... Q8DIF8 14764885
    49414 1s5l:c (3.5) BS14 CLA ? GO:0005737 ... Q8DIF8 14764885
    49415 1s5l:d (3.5) BS01 FE 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49416 1s5l:d (3.5) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49417 1s5l:d (3.5) BS03 PHO 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49418 1s5l:d (3.5) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49419 1s5l:d (3.5) BS05 BCT 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49420 1s5l:d (3.5) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49421 1s5l:d (3.5) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49422 1s5l:d (3.5) BS08 PHO 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49423 1s5l:d (3.5) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 14764885
    49424 1s5l:e (3.5) BS01 HEC ? GO:0005506 ... Q8DIP0 14764885
    49425 1s5l:f (3.5) BS01 HEC ? GO:0005506 ... Q8DIN9 14764885
    49426 1s5l:h (3.5) BS01 CLA ? GO:0009523 ... Q8DJ43 14764885
    49427 1s5l:h (3.5) BS02 CLA ? GO:0009523 ... Q8DJ43 14764885
    49428 1s5l:h (3.5) BS03 CLA ? GO:0009523 ... Q8DJ43 14764885
    49429 1s5l:h (3.5) BS04 CLA ? GO:0009523 ... Q8DJ43 14764885
    49430 1s5l:i (3.5) BS01 CLA ? GO:0005737 ... Q8DJZ6 14764885
    49431 1s5l:k (3.5) BS01 CLA ? GO:0009523 ... Q9F1K9 14764885
    49432 1s5l:k (3.5) BS02 CLA ? GO:0009523 ... Q9F1K9 14764885
    49433 1s5l:m (3.5) BS01 CLA ? GO:0005737 ... Q8DHA7 14764885
    49434 1s5l:v (3.5) BS01 HEC ? GO:0005506 ... P0A386 14764885
    49435 1s5m:A (0.98) BS01 GLC 5.3.1.5 GO:0000287 ... P15587 15157080
    49436 1s5m:A (0.98) BS02 MN 5.3.1.5 GO:0000287 ... P15587 15157080
    49437 1s5m:A (0.98) BS03 MN 5.3.1.5 GO:0000287 ... P15587 15157080
    49438 1s5n:A (0.95) BS01 XYL 5.3.1.5 GO:0000287 ... P15587 15157080
    49439 1s5n:A (0.95) BS02 MN 5.3.1.5 GO:0000287 ... P15587 15157080
    49440 1s5n:A (0.95) BS03 MN 5.3.1.5 GO:0000287 ... P15587 15157080
    49441 1s5o:A (1.8) BS01 152 2.3.1.137
    2.3.1.7
    GO:0003997 ... P43155 15099582
    49442 1s5p:A (1.96) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 15019790
    49443 1s5p:A (1.96) BS02 ZN 2.3.1.286 GO:0036054 ... P75960 15019790
    49444 1s5q:B (-1.00) BS01 peptide ? GO:0003714 ... Q60520 15235594
    49445 1s5r:B (-1.00) BS01 peptide ? GO:0003714 ... Q60520 15235594
    49446 1s5s:A (1.4) BS01 CA 3.4.21.4 GO:0004252 ... P00761 15005618
    49447 1s5s:A (1.4) BS02 PG3 3.4.21.4 GO:0004252 ... P00761 15005618
    49448 1s5x:A (2.4) BS01 HEM ? GO:0004601 ... P80043 15096204
    49449 1s5x:B (2.4) BS01 HEM ? GO:0004601 ... P80044 15096204
    49450 1s5y:A (2.5) BS01 HEM ? GO:0004601 ... P80043 15096204
    49451 1s5y:B (2.5) BS01 HEM ? GO:0004601 ... P80044 15096204
    49452 1s5y:C (2.5) BS01 HEM ? GO:0004601 ... P80043 15096204
    49453 1s5y:D (2.5) BS01 HEM ? GO:0004601 ... P80044 15096204
    49454 1s5z:A (2.0) BS01 SON 2.7.4.6 GO:0004550 ... P22887 16787337
    49455 1s60:A (3.0) BS01 COA 2.3.1.82 GO:0006084 ... Q9R381 15123251
    49456 1s61:A (2.1) BS01 HEM ? GO:0005515 ... P9WN25 15016811
    49457 1s61:B (2.1) BS01 HEM ? GO:0005515 ... P9WN25 15016811
    49458 1s63:A (1.9) BS01 GLC 2.5.1.58
    2.5.1.59
    GO:0004660 ... P49354 15248757
    49459 1s63:A (1.9) BS02 FPP 2.5.1.58
    2.5.1.59
    GO:0004660 ... P49354 15248757 BindingDB: Kd=2.0nM
    49460 1s63:B (1.9) BS01 GLC 2.5.1.58 GO:0003824 ... P49356 15248757
    49461 1s63:B (1.9) BS02 FRU 2.5.1.58 GO:0003824 ... P49356 15248757
    49462 1s63:B (1.9) BS03 ZN 2.5.1.58 GO:0003824 ... P49356 15248757
    49463 1s63:B (1.9) BS04 FPP 2.5.1.58 GO:0003824 ... P49356 15248757
    49464 1s63:B (1.9) BS05 778 2.5.1.58 GO:0003824 ... P49356 15248757 MOAD: Ki=0.9nM
    BindingDB: IC50=2nM
    49465 1s64:B (2.55) BS01 ZN 2.5.1.59 GO:0003824 ... P53610 15248757
    49466 1s64:B (2.55) BS02 778 2.5.1.59 GO:0003824 ... P53610 15248757
    49467 1s64:D (2.55) BS01 ZN 2.5.1.59 GO:0003824 ... P53610 15248757
    49468 1s64:D (2.55) BS02 778 2.5.1.59 GO:0003824 ... P53610 15248757
    49469 1s64:F (2.55) BS01 ZN 2.5.1.59 GO:0003824 ... P53610 15248757
    49470 1s64:F (2.55) BS02 778 2.5.1.59 GO:0003824 ... P53610 15248757
    49471 1s64:H (2.55) BS01 ZN 2.5.1.59 GO:0003824 ... P53610 15248757
    49472 1s64:H (2.55) BS02 778 2.5.1.59 GO:0003824 ... P53610 15248757
    49473 1s64:J (2.55) BS01 ZN 2.5.1.59 GO:0003824 ... P53610 15248757
    49474 1s64:J (2.55) BS02 778 2.5.1.59 GO:0003824 ... P53610 15248757
    49475 1s64:L (2.55) BS01 ZN 2.5.1.59 GO:0003824 ... P53610 15248757
    49476 1s64:L (2.55) BS02 778 2.5.1.59 GO:0003824 ... P53610 15248757
    49477 1s66:L (1.8) BS01 HEM 3.1.4.52 N/A P76129 15005609
    49478 1s66:U (1.8) BS01 HEM 3.1.4.52 N/A P76129 15005609
    49479 1s67:L (1.5) BS01 HEM 3.1.4.52 N/A P76129 15005609
    49480 1s67:U (1.5) BS01 HEM 3.1.4.52 N/A P76129 15005609
    49481 1s68:A (1.9) BS01 AMP 6.5.1.3 GO:0003972 ... P32277 14962393
    49482 1s69:A (1.68) BS01 CYN ? GO:0005737 ... P73925 15289104
    49483 1s69:A (1.68) BS02 HEM ? GO:0005737 ... P73925 15289104
    49484 1s6a:A (1.69) BS01 AZI ? GO:0005737 ... P73925 15289104
    49485 1s6a:A (1.69) BS02 HEM ? GO:0005737 ... P73925 15289104
    49486 1s6b:A (1.6) BS01 CA 3.1.1.4 GO:0004623 ... P60043 15828003
    49487 1s6b:B (1.6) BS01 CA 3.1.1.4 GO:0004623 ... P60044 15828003
    49488 1s6b:B (1.6) BS02 CA 3.1.1.4 GO:0004623 ... P60044 15828003
    49489 1s6c:A (2.0) BS01 peptide ? GO:0005509 ... Q8R426 14980206
    49490 1s6c:A (2.0) BS02 CA ? GO:0005509 ... Q8R426 14980206
    49491 1s6c:A (2.0) BS03 CA ? GO:0005509 ... Q8R426 14980206
    49492 1s6f:A (1.8) BS01 CA 3.4.21.4 GO:0004252 ... P00761 15005618
    49493 1s6f:A (1.8) BS02 SBP 3.4.21.4 GO:0004252 ... P00761 15005618
    49494 1s6f:A (1.8) BS03 EDO 3.4.21.4 GO:0004252 ... P00761 15005618
    49495 1s6f:A (1.8) BS04 EDO 3.4.21.4 GO:0004252 ... P00761 15005618
    49496 1s6f:A (1.8) BS05 EDO 3.4.21.4 GO:0004252 ... P00761 15005618
    49497 1s6h:A (1.45) BS01 CA 3.4.21.4 GO:0004252 ... P00761 15005618
    49498 1s6h:A (1.45) BS02 4BZ 3.4.21.4 GO:0004252 ... P00761 15005618
    49499 1s6i:A (-1.00) BS01 CA 2.7.11.1 GO:0005509 ... P28583 15155727
    49500 1s6i:A (-1.00) BS02 CA 2.7.11.1 GO:0005509 ... P28583 15155727
    49501 1s6i:A (-1.00) BS03 CA 2.7.11.1 GO:0005509 ... P28583 15155727
    49502 1s6i:A (-1.00) BS04 CA 2.7.11.1 GO:0005509 ... P28583 15155727
    49503 1s6j:A (-1.00) BS01 CA 2.7.11.1 GO:0005509 ... P28583 15568805
    49504 1s6j:A (-1.00) BS02 CA 2.7.11.1 GO:0005509 ... P28583 15568805
    49505 1s6m:A (2.28) BS01 dna ? N/A Q47673 16540117
    49506 1s6p:A (2.9) BS01 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 15115397
    49507 1s6p:A (2.9) BS02 IET 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 15115397
    49508 1s6q:A (3.0) BS01 TPB 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 15115397
    49509 1s6r:A (2.24) BS01 IAP 3.5.2.6 GO:0008800 ... Q93CA2 14521155
    49510 1s6u:A (-1.00) BS01 CU1 7.2.2.8 GO:0046872 ... Q04656 15035611
    49511 1s6v:A (1.88) BS01 HEC 1.11.1.5 GO:0004601 ... P00431 15071191
    49512 1s6v:B (1.88) BS01 HEC ? GO:0005515 ... P00044 15071191
    49513 1s6v:C (1.88) BS01 HEC 1.11.1.5 GO:0004601 ... P00431 15071191
    49514 1s6v:D (1.88) BS01 HEC ? GO:0005515 ... P00044 15071191
    49515 1s70:A (2.7) BS01 MN 3.1.3.16
    3.1.3.53
    GO:0004721 ... P62207 15164081
    49516 1s70:A (2.7) BS02 MN 3.1.3.16
    3.1.3.53
    GO:0004721 ... P62207 15164081
    49517 1s72:1 (2.4) BS01 rna ? GO:0003723 ... P32410 15184028
    49518 1s72:2 (2.4) BS01 rna ? GO:0003735 ... P22452 15184028
    49519 1s72:3 (2.4) BS01 rna ? GO:0003735 ... P32411 15184028
    49520 1s72:3 (2.4) BS02 MG ? GO:0003735 ... P32411 15184028
    49521 1s72:A (2.4) BS01 rna ? GO:0002181 ... P20276 15184028
    49522 1s72:A (2.4) BS02 MG ? GO:0002181 ... P20276 15184028
    49523 1s72:B (2.4) BS01 rna ? GO:0003723 ... P20279 15184028
    49524 1s72:C (2.4) BS01 rna ? GO:0003735 ... P12735 15184028
    49525 1s72:D (2.4) BS01 rna ? GO:0000049 ... P14124 15184028
    49526 1s72:D (2.4) BS02 rna ? GO:0000049 ... P14124 15184028
    49527 1s72:E (2.4) BS01 rna ? GO:0002181 ... P14135 15184028
    49528 1s72:F (2.4) BS01 rna ? GO:0001682 ... P12743 15184028
    49529 1s72:H (2.4) BS01 rna ? GO:0003735 ... P60617 15184028
    49530 1s72:I (2.4) BS01 rna ? GO:0003735 ... P14122 15184028
    49531 1s72:J (2.4) BS01 rna ? GO:0003729 ... P29198 15184028
    49532 1s72:K (2.4) BS01 rna ? GO:0003735 ... P22450 15184028
    49533 1s72:L (2.4) BS01 rna ? GO:0003735 ... P12737 15184028
    49534 1s72:M (2.4) BS01 rna ? GO:0002181 ... P60618 15184028
    49535 1s72:N (2.4) BS01 rna ? GO:0000027 ... P14123 15184028
    49536 1s72:N (2.4) BS02 rna ? GO:0000027 ... P14123 15184028
    49537 1s72:O (2.4) BS01 rna ? GO:0003723 ... P12733 15184028
    49538 1s72:P (2.4) BS01 rna ? GO:0003723 ... P14119 15184028
    49539 1s72:Q (2.4) BS01 rna ? GO:0003735 ... P12734 15184028
    49540 1s72:Q (2.4) BS02 rna ? GO:0003735 ... P12734 15184028
    49541 1s72:R (2.4) BS01 rna ? GO:0002181 ... P10970 15184028
    49542 1s72:S (2.4) BS01 rna ? GO:0003735 ... P12732 15184028
    49543 1s72:T (2.4) BS01 rna ? GO:0003723 ... P10972 15184028
    49544 1s72:T (2.4) BS02 MG ? GO:0003723 ... P10972 15184028
    49545 1s72:U (2.4) BS01 rna ? GO:0003735 ... P14116 15184028
    49546 1s72:V (2.4) BS01 rna ? GO:0003735 ... P10971 15184028
    49547 1s72:W (2.4) BS01 rna ? GO:0000463 ... P14121 15184028
    49548 1s72:W (2.4) BS02 rna ? GO:0000463 ... P14121 15184028
    49549 1s72:X (2.4) BS01 rna ? GO:0002181 ... P18138 15184028
    49550 1s72:Y (2.4) BS01 rna ? GO:0000166 ... P12736 15184028
    49551 1s72:Y (2.4) BS02 MG ? GO:0000166 ... P12736 15184028
    49552 1s72:Z (2.4) BS01 rna ? GO:0003735 ... P60619 15184028
    49553 1s73:A (1.53) BS01 FMI 1.11.1.5 GO:0004601 ... P00431 N/A
    49554 1s76:D (2.88) BS01 dna 2.7.7.6 GO:0000428 ... P00573 15016374
    49555 1s76:D (2.88) BS02 dna 2.7.7.6 GO:0000428 ... P00573 15016374
    49556 1s76:D (2.88) BS03 rna 2.7.7.6 GO:0000428 ... P00573 15016374
    49557 1s76:D (2.88) BS04 APC 2.7.7.6 GO:0000428 ... P00573 15016374
    49558 1s76:D (2.88) BS05 MG 2.7.7.6 GO:0000428 ... P00573 15016374
    49559 1s76:D (2.88) BS06 MG 2.7.7.6 GO:0000428 ... P00573 15016374
    49560 1s77:D (2.69) BS01 dna 2.7.7.6 GO:0000428 ... P00573 15016374
    49561 1s77:D (2.69) BS02 dna 2.7.7.6 GO:0000428 ... P00573 15016374
    49562 1s77:D (2.69) BS03 rna 2.7.7.6 GO:0000428 ... P00573 15016374
    49563 1s77:D (2.69) BS04 MG 2.7.7.6 GO:0000428 ... P00573 15016374
    49564 1s77:D (2.69) BS05 POP 2.7.7.6 GO:0000428 ... P00573 15016374
    49565 1s7d:A (2.17) BS01 ZN ? GO:0008270 ... P76344 N/A
    49566 1s7d:A (2.17) BS02 ZN ? GO:0008270 ... P76344 N/A
    49567 1s7g:A (2.3) BS01 ZN 2.3.1.286 GO:0005737 ... O30124 15023335
    49568 1s7g:A (2.3) BS02 ZN 2.3.1.286 GO:0005737 ... O30124 15023335
    49569 1s7g:A (2.3) BS03 NAD 2.3.1.286 GO:0005737 ... O30124 15023335
    49570 1s7g:B (2.3) BS01 ZN 2.3.1.286 GO:0005737 ... O30124 15023335
    49571 1s7g:B (2.3) BS02 ZN 2.3.1.286 GO:0005737 ... O30124 15023335
    49572 1s7g:B (2.3) BS03 NAD 2.3.1.286 GO:0005737 ... O30124 15023335
    49573 1s7g:C (2.3) BS01 ZN 2.3.1.286 GO:0005737 ... O30124 15023335
    49574 1s7g:C (2.3) BS02 ZN 2.3.1.286 GO:0005737 ... O30124 15023335
    49575 1s7g:C (2.3) BS03 NAD 2.3.1.286 GO:0005737 ... O30124 15023335
    49576 1s7g:D (2.3) BS01 ZN 2.3.1.286 GO:0005737 ... O30124 15023335
    49577 1s7g:D (2.3) BS02 ZN 2.3.1.286 GO:0005737 ... O30124 15023335
    49578 1s7g:E (2.3) BS01 ZN 2.3.1.286 GO:0005737 ... O30124 15023335
    49579 1s7g:E (2.3) BS02 APR 2.3.1.286 GO:0005737 ... O30124 15023335
    49580 1s7l:A (2.3) BS01 COA 2.3.1.- GO:0005737 ... Q8ZPC0 15817456
    49581 1s7n:A (2.1) BS01 COA 2.3.1.- GO:0005737 ... Q8ZPC0 15817456
    49582 1s7n:B (2.1) BS01 COA 2.3.1.- GO:0005737 ... Q8ZPC0 15817456
    49583 1s7n:C (2.1) BS01 COA 2.3.1.- GO:0005737 ... Q8ZPC0 15817456
    49584 1s7n:D (2.1) BS01 COA 2.3.1.- GO:0005737 ... Q8ZPC0 15817456
    49585 1s7q:A (1.99) BS01 peptide ? GO:0000139 ... P01901 15100292
    49586 1s7r:A (2.95) BS01 peptide ? GO:0000139 ... P01901 15100292
    49587 1s7r:D (2.95) BS01 peptide ? GO:0000139 ... P01901 15100292
    49588 1s7s:A (1.99) BS01 peptide ? GO:0000139 ... P01901 15100292
    49589 1s7t:A (2.3) BS01 peptide ? GO:0000139 ... P01901 15100292
    49590 1s7t:D (2.3) BS01 peptide ? GO:0000139 ... P01901 15100292
    49591 1s7u:A (2.2) BS01 peptide ? GO:0006955 ... P01899 15100292
    49592 1s7u:D (2.2) BS01 peptide ? GO:0006955 ... P01899 15100292
    49593 1s7u:G (2.2) BS01 peptide ? GO:0006955 ... P01899 15100292
    49594 1s7u:J (2.2) BS01 peptide ? GO:0006955 ... P01899 15100292
    49595 1s7v:A (2.2) BS01 peptide ? GO:0006955 ... P01899 15100292
    49596 1s7v:D (2.2) BS01 peptide ? GO:0006955 ... P01899 15100292
    49597 1s7w:A (2.4) BS01 peptide ? GO:0006955 ... P01899 15100292
    49598 1s7w:D (2.4) BS01 peptide ? GO:0006955 ... P01899 15100292
    49599 1s7w:G (2.4) BS01 peptide ? GO:0006955 ... P01899 15100292
    49600 1s7w:J (2.4) BS01 peptide ? GO:0006955 ... P01899 15100292

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).