SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    499601 6kko:B (2.099) BS01 ADP ? GO:0000166 ... Q9I6W1 32090355
    499602 6kkr:A (2.9) BS01 GLC ? GO:0005515 ... Q9UP95 31649201
    499603 6kkr:A (2.9) BS02 BGC ? GO:0005515 ... Q9UP95 31649201
    499604 6kkr:A (2.9) BS03 CL ? GO:0005515 ... Q9UP95 31649201
    499605 6kkr:A (2.9) BS04 K ? GO:0005515 ... Q9UP95 31649201
    499606 6kkr:A (2.9) BS05 DU0 ? GO:0005515 ... Q9UP95 31649201
    499607 6kkr:A (2.9) BS06 DU0 ? GO:0005515 ... Q9UP95 31649201
    499608 6kkr:B (2.9) BS01 BGC ? GO:0005515 ... Q9UP95 31649201
    499609 6kkr:B (2.9) BS02 GLC ? GO:0005515 ... Q9UP95 31649201
    499610 6kkr:B (2.9) BS03 DU0 ? GO:0005515 ... Q9UP95 31649201
    499611 6kkr:B (2.9) BS04 CL ? GO:0005515 ... Q9UP95 31649201
    499612 6kkr:B (2.9) BS05 K ? GO:0005515 ... Q9UP95 31649201
    499613 6kkr:B (2.9) BS06 DU0 ? GO:0005515 ... Q9UP95 31649201
    499614 6kks:A (2.15) BS01 dna ? N/A Q9SEI0 31733060
    499615 6kks:A (2.15) BS02 dna ? N/A Q9SEI0 31733060
    499616 6kks:A (2.15) BS03 MG ? N/A Q9SEI0 31733060
    499617 6kkt:A (2.9) BS01 GLC ? GO:0005515 ... Q9UP95 31649201
    499618 6kkt:A (2.9) BS02 BGC ? GO:0005515 ... Q9UP95 31649201
    499619 6kkt:A (2.9) BS03 CL ? GO:0005515 ... Q9UP95 31649201
    499620 6kkt:A (2.9) BS04 K ? GO:0005515 ... Q9UP95 31649201
    499621 6kkt:A (2.9) BS05 DU0 ? GO:0005515 ... Q9UP95 31649201
    499622 6kkt:A (2.9) BS06 DU0 ? GO:0005515 ... Q9UP95 31649201
    499623 6kkt:B (2.9) BS01 BGC ? GO:0005515 ... Q9UP95 31649201
    499624 6kkt:B (2.9) BS02 GLC ? GO:0005515 ... Q9UP95 31649201
    499625 6kkt:B (2.9) BS03 DU0 ? GO:0005515 ... Q9UP95 31649201
    499626 6kkt:B (2.9) BS04 CL ? GO:0005515 ... Q9UP95 31649201
    499627 6kkt:B (2.9) BS05 K ? GO:0005515 ... Q9UP95 31649201
    499628 6kkt:B (2.9) BS06 DU0 ? GO:0005515 ... Q9UP95 31649201
    499629 6kku:A (3.5) BS01 GLC ? GO:0005515 ... Q9UP95 31649201
    499630 6kku:A (3.5) BS02 CL ? GO:0005515 ... Q9UP95 31649201
    499631 6kku:A (3.5) BS03 DU0 ? GO:0005515 ... Q9UP95 31649201
    499632 6kku:A (3.5) BS04 DU0 ? GO:0005515 ... Q9UP95 31649201
    499633 6kku:B (3.5) BS01 GLC ? GO:0005515 ... Q9UP95 31649201
    499634 6kku:B (3.5) BS02 DU0 ? GO:0005515 ... Q9UP95 31649201
    499635 6kku:B (3.5) BS03 CL ? GO:0005515 ... Q9UP95 31649201
    499636 6kku:B (3.5) BS04 DU0 ? GO:0005515 ... Q9UP95 31649201
    499637 6kkv:A (2.56) BS01 DKR 6.5.1.2 GO:0003911 ... P9WNV1 33197566
    499638 6kkw:A (3.202) BS01 COD 2.7.7.3 GO:0003824 ... B0V8I3 N/A
    499639 6kl5:A (3.09) BS01 DJO ? GO:0003723 ... K9N4V7 32105468
    499640 6kl5:C (3.09) BS01 DJO ? GO:0003723 ... K9N4V7 32105468
    499641 6kl6:B (2.77) BS01 DJU ? GO:0003723 ... K9N4V7 32105468
    499642 6kl6:D (2.77) BS01 DJU ? GO:0003723 ... K9N4V7 32105468
    499643 6kl9:A (3.25) BS01 rna N/A N/A N/A 31467167
    499644 6kl9:B (3.25) BS01 rna N/A N/A N/A 31467167
    499645 6kla:A (2.109) BS01 DJX 2.7.10.1 GO:0004672 ... P10721 31721578
    499646 6klb:A (4.1) BS01 rna N/A N/A N/A 31467167
    499647 6klb:C (4.1) BS01 rna N/A N/A N/A 31467167
    499648 6klb:D (4.1) BS01 rna N/A N/A N/A 31467167
    499649 6klc:A (3.9) BS01 MN 2.7.7.48
    3.1.-.-
    GO:0000166 ... A0A097F4L1 32214249
    499650 6kld:A (3.58) BS01 MN 2.7.7.48
    3.1.-.-
    GO:0000166 ... Q6IVU0 32214249
    499651 6kld:A (3.58) BS02 ZN 2.7.7.48
    3.1.-.-
    GO:0000166 ... Q6IVU0 32214249
    499652 6kle:A (4.5) BS01 rna 2.7.7.48
    3.1.-.-
    GO:0000166 ... Q6IVU0 32214249
    499653 6kle:A (4.5) BS02 MN 2.7.7.48
    3.1.-.-
    GO:0000166 ... Q6IVU0 32214249
    499654 6kle:A (4.5) BS03 ZN 2.7.7.48
    3.1.-.-
    GO:0000166 ... Q6IVU0 32214249
    499655 6klg:A (2.1) BS01 CU 1.10.3.2 GO:0005507 ... Q2PAJ1 32123349
    499656 6klg:A (2.1) BS02 CU 1.10.3.2 GO:0005507 ... Q2PAJ1 32123349
    499657 6klg:A (2.1) BS03 CU 1.10.3.2 GO:0005507 ... Q2PAJ1 32123349
    499658 6klg:A (2.1) BS04 CU 1.10.3.2 GO:0005507 ... Q2PAJ1 32123349
    499659 6klg:A (2.1) BS05 OXY 1.10.3.2 GO:0005507 ... Q2PAJ1 32123349
    499660 6klh:A (3.7) BS01 rna 2.7.7.48
    3.1.-.-
    GO:0000166 ... Q6IVU0 32214249
    499661 6klh:A (3.7) BS02 MN 2.7.7.48
    3.1.-.-
    GO:0000166 ... Q6IVU0 32214249
    499662 6klh:A (3.7) BS03 ZN 2.7.7.48
    3.1.-.-
    GO:0000166 ... Q6IVU0 32214249
    499663 6klh:C (3.7) BS01 rna 2.7.7.48
    3.1.-.-
    GO:0000166 ... Q6IVU0 32214249
    499664 6klh:C (3.7) BS02 MN 2.7.7.48
    3.1.-.-
    GO:0000166 ... Q6IVU0 32214249
    499665 6klh:C (3.7) BS03 ZN 2.7.7.48
    3.1.-.-
    GO:0000166 ... Q6IVU0 32214249
    499666 6kli:A (1.8) BS01 CU 1.10.3.2 GO:0005507 ... Q2PAJ1 32123349
    499667 6kli:A (1.8) BS02 CU 1.10.3.2 GO:0005507 ... Q2PAJ1 32123349
    499668 6kli:A (1.8) BS03 CU 1.10.3.2 GO:0005507 ... Q2PAJ1 32123349
    499669 6kli:A (1.8) BS04 CU 1.10.3.2 GO:0005507 ... Q2PAJ1 32123349
    499670 6kli:A (1.8) BS05 55B 1.10.3.2 GO:0005507 ... Q2PAJ1 32123349
    499671 6kli:A (1.8) BS06 OXY 1.10.3.2 GO:0005507 ... Q2PAJ1 32123349
    499672 6klj:A (1.998) BS01 CU 1.10.3.2 GO:0005507 ... Q2PAJ1 32123349
    499673 6klj:A (1.998) BS02 CU 1.10.3.2 GO:0005507 ... Q2PAJ1 32123349
    499674 6klj:A (1.998) BS03 CU 1.10.3.2 GO:0005507 ... Q2PAJ1 32123349
    499675 6klj:A (1.998) BS04 CU 1.10.3.2 GO:0005507 ... Q2PAJ1 32123349
    499676 6klj:A (1.998) BS05 CIY 1.10.3.2 GO:0005507 ... Q2PAJ1 32123349
    499677 6klj:A (1.998) BS06 OXY 1.10.3.2 GO:0005507 ... Q2PAJ1 32123349
    499678 6klk:A (1.759) BS01 URF 3.5.2.2 GO:0004157 ... Q9I676 31481233 MOAD: Kd=133.2uM
    499679 6klk:A (1.759) BS02 ZN 3.5.2.2 GO:0004157 ... Q9I676 31481233
    499680 6klk:A (1.759) BS03 ZN 3.5.2.2 GO:0004157 ... Q9I676 31481233
    499681 6klk:B (1.759) BS01 ZN 3.5.2.2 GO:0004157 ... Q9I676 31481233
    499682 6klk:B (1.759) BS02 ZN 3.5.2.2 GO:0004157 ... Q9I676 31481233
    499683 6kll:A (3.0) BS01 ADP 3.6.4.- GO:0001725 ... P68134 31954841
    499684 6kll:B (3.0) BS01 ADP 3.6.4.- GO:0001725 ... P68134 31954841
    499685 6kll:C (3.0) BS01 ADP 3.6.4.- GO:0001725 ... P68134 31954841
    499686 6kll:D (3.0) BS01 ADP 3.6.4.- GO:0001725 ... P68134 31954841
    499687 6kln:A (3.4) BS01 ADP 3.6.4.- GO:0001725 ... P68134 31954841
    499688 6kln:B (3.4) BS01 ADP 3.6.4.- GO:0001725 ... P68134 31954841
    499689 6kln:C (3.4) BS01 ADP 3.6.4.- GO:0001725 ... P68134 31954841
    499690 6kln:D (3.4) BS01 ADP 3.6.4.- GO:0001725 ... P68134 31954841
    499691 6klo:A (2.8) BS01 CA ? GO:0005576 ... Q46221 32123390
    499692 6klo:A (2.8) BS02 CA ? GO:0005576 ... Q46221 32123390
    499693 6klo:B (2.8) BS01 CA ? GO:0005576 ... Q46221 32123390
    499694 6klo:B (2.8) BS02 CA ? GO:0005576 ... Q46221 32123390
    499695 6klo:C (2.8) BS01 CA ? GO:0005576 ... Q46221 32123390
    499696 6klo:C (2.8) BS02 CA ? GO:0005576 ... Q46221 32123390
    499697 6klo:D (2.8) BS01 CA ? GO:0005576 ... Q46221 32123390
    499698 6klo:D (2.8) BS02 CA ? GO:0005576 ... Q46221 32123390
    499699 6klo:E (2.8) BS01 CA ? GO:0005576 ... Q46221 32123390
    499700 6klo:E (2.8) BS02 CA ? GO:0005576 ... Q46221 32123390
    499701 6klo:F (2.8) BS01 CA ? GO:0005576 ... Q46221 32123390
    499702 6klo:F (2.8) BS02 CA ? GO:0005576 ... Q46221 32123390
    499703 6klo:G (2.8) BS01 CA ? GO:0005576 ... Q46221 32123390
    499704 6klo:G (2.8) BS02 CA ? GO:0005576 ... Q46221 32123390
    499705 6klr:A (2.21) BS01 peptide ? GO:0000045 ... Q2TAZ0
    Q5MNZ6
    32483132
    499706 6kls:A (3.3) BS01 FES ? GO:0005886 ... O66460 31778296
    499707 6kls:A (3.3) BS02 DLX ? GO:0005886 ... O66460 31778296
    499708 6kls:A (3.3) BS03 HEC ? GO:0005886 ... O66460 31778296
    499709 6kls:B (3.3) BS01 HEM ? GO:0009055 ... O66459 31778296
    499710 6kls:B (3.3) BS02 HEM ? GO:0009055 ... O66459 31778296
    499711 6kls:B (3.3) BS03 DLX ? GO:0009055 ... O66459 31778296
    499712 6kls:B (3.3) BS04 DLX ? GO:0009055 ... O66459 31778296
    499713 6kls:B (3.3) BS05 DLX ? GO:0009055 ... O66459 31778296
    499714 6kls:C (3.3) BS01 DLX ? GO:0009055 ... O66458 31778296
    499715 6kls:C (3.3) BS02 HEC ? GO:0009055 ... O66458 31778296
    499716 6kls:D (3.3) BS01 HEC ? GO:0005886 ... O66460 31778296
    499717 6kls:D (3.3) BS02 FES ? GO:0005886 ... O66460 31778296
    499718 6kls:D (3.3) BS03 DLX ? GO:0005886 ... O66460 31778296
    499719 6kls:E (3.3) BS01 DLX ? GO:0009055 ... O66459 31778296
    499720 6kls:E (3.3) BS02 HEM ? GO:0009055 ... O66459 31778296
    499721 6kls:E (3.3) BS03 HEM ? GO:0009055 ... O66459 31778296
    499722 6kls:E (3.3) BS04 DLX ? GO:0009055 ... O66459 31778296
    499723 6kls:E (3.3) BS05 DLX ? GO:0009055 ... O66459 31778296
    499724 6kls:F (3.3) BS01 DLX ? GO:0009055 ... O66458 31778296
    499725 6kls:F (3.3) BS02 HEC ? GO:0009055 ... O66458 31778296
    499726 6klt:A (12.0) BS01 CA ? GO:0002086 ... P19123 31954841
    499727 6klt:A (12.0) BS02 CA ? GO:0002086 ... P19123 31954841
    499728 6klu:A (12.0) BS01 CA ? GO:0002086 ... P19123 31954841
    499729 6klu:A (12.0) BS02 CA ? GO:0002086 ... P19123 31954841
    499730 6klu:A (12.0) BS03 CA ? GO:0002086 ... P19123 31954841
    499731 6klv:A (3.2) BS01 FES ? GO:0005886 ... O66460 31778296
    499732 6klv:A (3.2) BS02 DLX ? GO:0005886 ... O66460 31778296
    499733 6klv:B (3.2) BS01 DLX ? GO:0009055 ... O66459 31778296
    499734 6klv:B (3.2) BS02 HEM ? GO:0009055 ... O66459 31778296
    499735 6klv:B (3.2) BS03 HEM ? GO:0009055 ... O66459 31778296
    499736 6klv:B (3.2) BS04 AMY ? GO:0009055 ... O66459 31778296
    499737 6klv:B (3.2) BS05 DLX ? GO:0009055 ... O66459 31778296
    499738 6klv:B (3.2) BS06 DLX ? GO:0009055 ... O66459 31778296
    499739 6klv:C (3.2) BS01 HEC ? GO:0009055 ... O66458 31778296
    499740 6klv:D (3.2) BS01 FES ? GO:0005886 ... O66460 31778296
    499741 6klv:D (3.2) BS02 DLX ? GO:0005886 ... O66460 31778296
    499742 6klv:E (3.2) BS01 DLX ? GO:0009055 ... O66459 31778296
    499743 6klv:E (3.2) BS02 HEM ? GO:0009055 ... O66459 31778296
    499744 6klv:E (3.2) BS03 HEM ? GO:0009055 ... O66459 31778296
    499745 6klv:E (3.2) BS04 AMY ? GO:0009055 ... O66459 31778296
    499746 6klv:E (3.2) BS05 DLX ? GO:0009055 ... O66459 31778296
    499747 6klv:F (3.2) BS01 HEC ? GO:0009055 ... O66458 31778296
    499748 6klw:A (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    499749 6klw:A (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    499750 6klw:B (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    499751 6klw:B (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    499752 6klw:C (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    499753 6klw:C (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    499754 6klw:D (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    499755 6klw:D (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    499756 6klw:E (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    499757 6klw:E (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    499758 6klw:F (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    499759 6klw:F (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    499760 6klw:G (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    499761 6klw:G (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    499762 6klx:A (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    499763 6klx:A (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    499764 6klx:B (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    499765 6klx:B (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    499766 6klx:C (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    499767 6klx:C (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    499768 6klx:D (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    499769 6klx:D (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    499770 6klx:E (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    499771 6klx:E (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    499772 6klx:F (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    499773 6klx:F (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    499774 6klx:G (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    499775 6klx:G (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    499776 6klz:A (0.9) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 33209313
    499777 6klz:A (0.9) BS02 BCT 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 33209313 BindingDB: Ki=85000000nM
    499778 6km0:A (0.93) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 33209313
    499779 6km0:A (0.93) BS02 BCT 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 33209313 BindingDB: Ki=85000000nM
    499780 6km1:A (1.05) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 33209313
    499781 6km1:A (1.05) BS02 BCT 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 33209313 BindingDB: Ki=85000000nM
    499782 6km2:A (0.9) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 33209313
    499783 6km2:A (0.9) BS02 BCT 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 33209313 BindingDB: Ki=85000000nM
    499784 6km3:A (1.15) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 33209313
    499785 6km4:A (1.15) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 33209313
    499786 6km5:A (1.151) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 33209313
    499787 6km6:A (1.15) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 33209313
    499788 6km8:A (3.099) BS01 CU N/A N/A N/A 31980708
    499789 6km8:A (3.099) BS02 ACT N/A N/A N/A 31980708
    499790 6km9:A (2.724) BS01 MG 1.2.4.2 GO:0004591 ... A0A3Q0L1E1 N/A
    499791 6km9:A (2.724) BS02 TPP 1.2.4.2 GO:0004591 ... A0A3Q0L1E1 N/A
    499792 6km9:A (2.724) BS03 TPP 1.2.4.2 GO:0004591 ... A0A3Q0L1E1 N/A
    499793 6km9:B (2.724) BS01 TPP 1.2.4.2 GO:0004591 ... A0A3Q0L1E1 N/A
    499794 6km9:B (2.724) BS02 MG 1.2.4.2 GO:0004591 ... A0A3Q0L1E1 N/A
    499795 6km9:B (2.724) BS03 TPP 1.2.4.2 GO:0004591 ... A0A3Q0L1E1 N/A
    499796 6kma:A (2.282) BS01 MG 1.2.4.2 GO:0004591 ... A0A3Q0L1E1 N/A
    499797 6kma:A (2.282) BS02 TPP 1.2.4.2 GO:0004591 ... A0A3Q0L1E1 N/A
    499798 6kma:A (2.282) BS03 DW3 1.2.4.2 GO:0004591 ... A0A3Q0L1E1 N/A
    499799 6kma:A (2.282) BS04 DW3 1.2.4.2 GO:0004591 ... A0A3Q0L1E1 N/A
    499800 6kma:A (2.282) BS05 TPP 1.2.4.2 GO:0004591 ... A0A3Q0L1E1 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).